21 results on '"Courtney M. Donahue"'
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2. The Influence of Redox-Innocent Donor Groups in Tetradentate Ligands Derived from o-Phenylenediamine: Electronic Structure Investigations with Nickel
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Kyounghoon Lee, Javier A. Luna, Suzanne C. Bart, James J. Shepherd, Courtney M. Donahue, Austin Benson, Hayley R. Petras, Scott K. Shaw, Ezra J. Coughlin, Scott R. Daly, Amani Kibasa, Kyle D. Spielvogel, and Ryan Salacinski
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Related factors ,010405 organic chemistry ,Chemistry ,Ligand ,chemistry.chemical_element ,Electronic structure ,010402 general chemistry ,01 natural sciences ,Redox ,0104 chemical sciences ,Inorganic Chemistry ,Metal ,chemistry.chemical_compound ,Nickel ,visual_art ,o-Phenylenediamine ,Polymer chemistry ,visual_art.visual_art_medium ,Physical and Theoretical Chemistry ,Spin density - Abstract
The continued development of redox-active ligands requires an understanding as to how ligand modifications and related factors affect the locus of redox activity and spin density in metal complexes...
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- 2019
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3. Validating the Biphilic Hypothesis of Nontrigonal Phosphorus(III) Compounds
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Scott R. Daly, Akira Tanushi, Sean M. McCarthy, Kyounghoon Lee, Kyle D. Spielvogel, Jason M. Keith, Courtney M. Donahue, Alexander T. Radosevich, Anastasia V. Blake, Daniel Kim, Sydney M. Loria, and Massachusetts Institute of Technology. Department of Chemistry
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Models, Molecular ,X-ray absorption spectroscopy ,010405 organic chemistry ,Chemistry ,Phosphorus ,General Medicine ,General Chemistry ,Time-dependent density functional theory ,Electronic structure ,Ligands ,010402 general chemistry ,01 natural sciences ,Oxidative addition ,Article ,Catalysis ,XANES ,0104 chemical sciences ,Organophosphorus Compounds ,X-Ray Absorption Spectroscopy ,Transition metal ,Main group element ,Computational chemistry ,Transition Elements ,Reactivity (chemistry) ,Oxidation-Reduction - Abstract
Constraining σ3-P compounds in nontrigonal, entatic geometries has proven to be an effective strategy for promoting biphilic oxidative addition reactions more typical of transition metals. Although qualitative descriptions of the impact of structure and symmetry on σ3-P complexes have been proposed, electronic structure variations responsible for biphilic reactivity have yet to be elucidated experimentally. Reported here are P K-edge XANES data and complementary TDDFT calculations for a series of structurally modified P(N)3 complexes that both validate and quantify electronic structure variations proposed to give rise to biphilic reactions at phosphorus. These data are presented alongside experimentally referenced electronic structure calculations that reveal nontrigonal structures predicted to further enhance biphilic reactivity in σ3-P ligands and catalysts., NIH NIGMS (Grant GM114547), NSF (Grant CHE-1724505)
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- 2019
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4. Measurement of Diphosphine σ-Donor and π-Acceptor Properties in d0 Titanium Complexes Using Ligand K-Edge XAS and TDDFT
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Kyounghoon Lee, Scott R. Daly, Courtney M. Donahue, Anastasia V. Blake, Haochuan Wei, and Jason M. Keith
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chemistry.chemical_classification ,X-ray absorption spectroscopy ,Ligand K-edge ,010405 organic chemistry ,fungi ,food and beverages ,chemistry.chemical_element ,Time-dependent density functional theory ,010402 general chemistry ,01 natural sciences ,Acceptor ,0104 chemical sciences ,Coordination complex ,Catalysis ,Inorganic Chemistry ,Crystallography ,chemistry ,Diphosphines ,Physical and Theoretical Chemistry ,Titanium - Abstract
Diphosphines are highly versatile ancillary ligands in coordination chemistry and catalysis because their structures and donor–acceptor properties can vary widely depending on the substituents atta...
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- 2018
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5. Solution and Solid‐State Ligand K‐Edge XAS Studies of PdCl 2 Diphosphine Complexes with Phenyl and Cyclohexyl Substituents
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Courtney M. Donahue, Scott R. Daly, Haochuan Wei, Kyounghoon Lee, Jason M. Keith, and Anastasia V. Blake
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Inorganic Chemistry ,X-ray absorption spectroscopy ,Crystallography ,Ligand K-edge ,010405 organic chemistry ,Chemistry ,Solid-state ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Published
- 2018
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6. Ligand K-Edge XAS Studies of Metal-Phosphorus Bonds: Applications, Limitations, and Opportunities
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Courtney M. Donahue and Scott R. Daly
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X-ray absorption spectroscopy ,Absorption spectroscopy ,Ligand K-edge ,010405 organic chemistry ,Phosphorus ,chemistry.chemical_element ,Electronic structure ,010402 general chemistry ,01 natural sciences ,XANES ,0104 chemical sciences ,Inorganic Chemistry ,Metal ,Crystallography ,chemistry.chemical_compound ,chemistry ,visual_art ,visual_art.visual_art_medium ,Phosphine - Abstract
Phosphorus K-edge X-ray absorption spectroscopy (XAS) is a highly effective experimental method for investigating metal-phosphorus bonding and electronic structure. Here, we provide a comprehensive...
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- 2018
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7. Solid energy calibration standards for PK-edge XANES: electronic structure analysis of PPh4Br
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Scott R. Daly, Kyounghoon Lee, Jason M. Keith, Courtney M. Donahue, Anastasia V. Blake, and Haochuan Wei
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Nuclear and High Energy Physics ,Radiation ,Materials science ,Absorption spectroscopy ,010405 organic chemistry ,Analytical chemistry ,Electronic structure ,Time-dependent density functional theory ,010402 general chemistry ,01 natural sciences ,XANES ,0104 chemical sciences ,K-edge ,Density functional theory ,Spectroscopy ,Absorption (electromagnetic radiation) ,Instrumentation - Abstract
PK-edge X-ray absorption near-edge structure (XANES) spectroscopy is a powerful method for analyzing the electronic structure of organic and inorganic phosphorus compounds. Like all XANES experiments, PK-edge XANES requires well defined and readily accessible calibration standards for energy referencing so that spectra collected at different beamlines or under different conditions can be compared. This is especially true for ligandK-edge X-ray absorption spectroscopy, which has well established energy calibration standards for Cl (Cs2CuCl4) and S (Na2S2O3·5H2O), but not neighboring P. This paper presents a review of common PK-edge XANES energy calibration standards and analysis of PPh4Br as a potential alternative. The PK-edge XANES region of commercially available PPh4Br revealed a single, highly resolved pre-edge feature with a maximum at 2146.96 eV. PPh4Br also showed no evidence of photodecomposition when repeatedly scanned over the course of several days. In contrast, we found that PPh3rapidly decomposes under identical conditions. Density functional theory calculations performed on PPh3and PPh4+revealed large differences in the molecular orbital energies that were ascribed to differences in the phosphorus oxidation state (IIIversusV) and molecular charge (neutralversus+1). Time-dependent density functional theory calculations corroborated the experimental data and allowed the spectral features to be assigned. The first pre-edge feature in the PK-edge XANES spectrum of PPh4Br was assigned to P 1s → P-C π* transitions, whereas those at higher energy were P 1s → P-C σ*. Overall, the analysis suggests that PPh4Br is an excellent alternative to other solid energy calibration standards commonly used in PK-edge XANES experiments.
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- 2018
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8. The Influence of Redox-Innocent Donor Groups in Tetradentate Ligands Derived from
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Kyle D, Spielvogel, Ezra J, Coughlin, Hayley, Petras, Javier A, Luna, Austin, Benson, Courtney M, Donahue, Amani, Kibasa, Kyounghoon, Lee, Ryan, Salacinski, Suzanne C, Bart, Scott K, Shaw, James J, Shepherd, and Scott R, Daly
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The continued development of redox-active ligands requires an understanding as to how ligand modifications and related factors affect the locus of redox activity and spin density in metal complexes. Here we describe the synthesis, characterization, and electronic structure of nickel complexes containing triaryl NNNN (
- Published
- 2019
9. Quantifying the Interdependence of Metal-Ligand Covalency and Bond Distance Using Ligand K-edge XAS
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Kyle D. Spielvogel, Scott R. Daly, Courtney M. Donahue, Anastasia V. Blake, Brian J. Bellott, and Kyounghoon Lee
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X-ray absorption spectroscopy ,Ionic radius ,Materials science ,Ligand K-edge ,010405 organic chemistry ,Ligand ,Crystallographic data ,General Chemistry ,General Medicine ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Metal ,Bond length ,Crystallography ,Covalent bond ,visual_art ,visual_art.visual_art_medium - Abstract
Bond distance is a common structural metric used to assess changes in metal-ligand bonds, but it is not clear how sensitive changes in bond distances are with respect to changes in metal-ligand covalency. Here we report ligand K-edge XAS studies on Ni and Pd complexes containing different phosphorus(III) ligands. Despite the large number of electronic and structural permutations, P K-edge pre-edge peak intensities reveal a remarkable correlation that spectroscopically quantifies the linear interdependence of covalent M-P σ bonding and bond distance. Cl K-edge studies conducted on many of the same Ni and Pd compounds revealed a poor correlation between M-Cl bond distance and covalency, but a strong correlation was established by analyzing Cl K-edge data for Ti complexes with a wider range of Ti-Cl bond distances. Together these results establish a quantitative framework to begin making more accurate assessments of metal-ligand covalency using bond distances from readily-available crystallographic data.
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- 2019
10. Triaminoborane-bridged diphosphine complexes with Ni and Pd: coordination chemistry, structures, and ligand-centered reactivity
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Courtney M. Donahue, Kyounghoon Lee, and Scott R. Daly
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chemistry.chemical_classification ,010405 organic chemistry ,Ligand ,Inorganic chemistry ,chemistry.chemical_element ,Nuclear magnetic resonance spectroscopy ,010402 general chemistry ,01 natural sciences ,Medicinal chemistry ,Chemical reaction ,0104 chemical sciences ,Coordination complex ,Inorganic Chemistry ,chemistry ,Diphosphines ,Reactivity (chemistry) ,Boron ,Isopropyl - Abstract
The synthesis, coordination chemistry, and reactivity of two diphosphines containing the cyclic triaminoborane 1,8,10,9-triazaboradecalin (TBD) are described. To evaluate the ligand-centered reactivity of PhTBDPhos and iPrTBDPhos, the complexes (PhTBDPhos)MCl2 and (iPrTBDPhos)MCl2, where M = Ni and Pd, were prepared and characterized by elemental analysis, multinuclear NMR spectroscopy (1H, 13C, 31P, and 11B), and single-crystal X-ray diffraction (XRD). Despite very low boron Lewis acidity in the TBD backbone, (PhTBDPhos)NiCl2 (1) and (PhTBDPhos)PdCl2 (3) react with H2O, alcohols, and hydrated fluoride reagents in the presence of NEt3 to yield trans H–O or H–F addition across the bridgehead N–B bond. In contrast, iPrTBDPhos shows no appreciable reactivity when bound to NiCl2 (2) and PdCl2 (4), which is attributed to the sterically-bulky isopropyl substituents blocking substrate access to boron in the TBD backbone. The new complexes {[(PhTBDPhos-H2O)Ni]2(μ-OH)2}Cl2 (5), {[(PhTBDPhos-H2O)Pd]2(μ-OH)2}Cl2 (6), (PhTBDPhos-MeOH)NiCl2 (7), (PhTBDPhos-MeOH)PdCl2 (8), (PhTBDPhos-C3H5OH)PdCl2 (9), and {[(PhTBDPhos-HF)Ni]2(μ-OH)2}Cl2 (10) were isolated, and all but 6 were structurally characterized by single-crystal XRD. Multinuclear NMR studies revealed that isolated, crystallographically-authenticated samples of 5–9 lose ligand-bound water or alcohol with reappearance of starting materials 1 and 3 when dissolved in NMR solvents. Addition of NEt3 attenuated the water and alcohol loss from 5–9 to allow 1H, 13C, 31P, and 11B NMR data to be collected for all the compounds, confirming the determined structures. Additional reactivity experiments with NaOMe and fluoride reagents suggested that participation of the bridgehead nitrogen in the TBD backbone is important for promoting reactivity at boron when PhTBDPhos is bound to Ni and Pd. The term “cooperative ligand-centered reactivity” (CLR) is proposed to define chemical reactions that appear to require participation of more than one atom on the ligand, such as those reported here.
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- 2017
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11. Electronic Support Effects of Tunable Mixed Metal Oxides on Immobilized Palladium N‐Heterocyclic Carbene Complexes
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Matthew Finn, Courtney M. Donahue, Anastasia V. Blake, Scott R. Daly, Nan An, and Adelina Voutchkova-Kostal
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Hydrotalcite ,Mixed metal ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Heterogeneous catalysis ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Polymer chemistry ,0210 nano-technology ,Carbene ,Palladium - Published
- 2020
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12. Measurement of Diphosphine σ-Donor and π-Acceptor Properties in d
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Kyounghoon, Lee, Haochuan, Wei, Anastasia V, Blake, Courtney M, Donahue, Jason M, Keith, and Scott R, Daly
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Diphosphines are highly versatile ancillary ligands in coordination chemistry and catalysis because their structures and donor-acceptor properties can vary widely depending on the substituents attached to phosphorus. Experimental and theoretical methods have been developed to quantify differences in phosphine and diphosphine ligand field strength, but experimentally measuring individual σ-donor and π-acceptor contributions to metal-phosphorus bonding remains a formidable challenge. Here we report P and Cl K-edge X-ray absorption spectroscopy (XAS), density functional theory (DFT), and time-dependent density functional theory (TDDFT) studies of a series of [Ph
- Published
- 2018
13. Impact of Coordination Geometry, Bite Angle, and Trans Influence on Metal–Ligand Covalency in Phenyl-Substituted Phosphine Complexes of Ni and Pd
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Brian J. Bellott, Courtney M. Donahue, Samuel P. McCollom, Scott R. Daly, Anastasia V. Blake, Jason M. Keith, and Chelsie M. Forrest
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chemistry.chemical_classification ,X-ray absorption spectroscopy ,Chemistry ,Ligand ,Trans effect ,Stereochemistry ,Bite angle ,Coordination complex ,Inorganic Chemistry ,Crystallography ,chemistry.chemical_compound ,Transition metal ,Physical and Theoretical Chemistry ,Phosphine ,Coordination geometry - Abstract
Despite the long-standing use of phosphine and diphosphine ligands in coordination chemistry and catalysis, questions remain as to their effects on metal-ligand bonding in transition metal complexes. Here we report ligand K-edge XAS, DFT, and TDDFT studies aimed at quantifying the impact of coordination geometry, diphosphine bite angle, and phosphine trans influence on covalency in M-P and M-Cl bonds. A series of four-coordinate NiCl2 and PdCl2 complexes containing PPh3 or Ph2P(CH2)nPPh2, where n = 1 (dppm), 2 (dppe), 3 (dppp), and 4 (dppb), was analyzed. The XAS data revealed that changing the coordination geometry from tetrahedral in Ni(PPh3)2Cl2 (1) to square planar in Ni(dppe)Cl2 (2) more than doubles the intensity of pre-edge features assigned to Ni-P and Ni-Cl 1s → σ* transitions. By way of comparison, varying the diphosphine in Pd(dppm)Cl2 (4), Pd(dppp)Cl2 (6), and Pd(dppb)Cl2 (7) yielded Pd-P 1s → σ* transitions with identical intensities, but a 10% increase was observed in the P K-edge XAS spectrum of Pd(dppe)Cl2 (5). A similar observation was made when comparing Ni(dppe)Cl2 (2) to Ni(dppp)Cl2 (3), and DFT and TDDFT calculations corroborated XAS results obtained for both series. Comparison of the spectroscopic and theoretical results to the diphosphine structures revealed that changes in M-P covalency were not correlated to changes in bite angles or coordination geometry. As a final measure, P and Cl K-edge XAS data were collected on trans-Pd(PPh3)2Cl2 (8) for comparison to the cis diphosphine complex Pd(dppe)Cl2 (5). Consistent with phosphine's stronger trans influence compared to chloride, a 35% decrease in the intensity of the Pd-P 1s → σ* pre-edge feature and a complementary 34% increase in Pd-Cl 1s → σ* feature was observed for 8 (trans) compared to 5 (cis). Overall, the results reveal how coordination geometry, ligand arrangement, and diphosphine structure affect covalent metal-phosphorus and metal-chloride bonding in these late transition metal complexes.
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- 2015
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14. Solid energy calibration standards for P K-edge XANES: electronic structure analysis of PPh
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Anastasia V, Blake, Haochuan, Wei, Courtney M, Donahue, Kyounghoon, Lee, Jason M, Keith, and Scott R, Daly
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P K-edge X-ray absorption near-edge structure (XANES) spectroscopy is a powerful method for analyzing the electronic structure of organic and inorganic phosphorus compounds. Like all XANES experiments, P K-edge XANES requires well defined and readily accessible calibration standards for energy referencing so that spectra collected at different beamlines or under different conditions can be compared. This is especially true for ligand K-edge X-ray absorption spectroscopy, which has well established energy calibration standards for Cl (Cs
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- 2017
15. Synthesis, characterization and structural comparisons of phosphonium and arsenic dithiocarbamates with alkyl and phenyl substituents
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Scott R. Daly, Thomas R. Savage, Courtney M. Donahue, Samantha L. Pecnik, Isabella K. Black, and Brian L. Scott
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chemistry.chemical_classification ,Iodide ,Inorganic chemistry ,chemistry.chemical_element ,Crystal structure ,Medicinal chemistry ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,X-ray crystallography ,Materials Chemistry ,Phosphonium ,Physical and Theoretical Chemistry ,Acetonitrile ,Dithiocarbamate ,Alkyl ,Arsenic - Abstract
The synthesis and characterization of the new arsenic dithiocarbamate complex As[S2CNPh2]3 and three new phosphonium dithiocarbamates [PPh4][S2CNR2], where R2 = Et2, (CH2)5 and Ph2, are reported. As[S2CNPh2]3 was prepared by treating AsI3 with three equivalents of NaS2CNPh2 in a 2:1 mixture of H2O and EtOH. The precipitate that formed was recrystallized from hot toluene to yield yellow prisms of As[S2CNPh2]3 suitable for single-crystal X-ray diffraction (XRD). Attempts to prepare the known compound As[S2CN(CH2)5]3 using a similar route resulted in a mixture of As[S2CN(CH2)5]3 and the mixed iodide species As[S2CN(CH2)5]2I. Single-crystals of both compounds were isolated from concentrated Et2O/CHCl3 solutions and their structures are described here for the first time. [PPh4][S2CNR2] salts were prepared for comparison to arsenic dithiocarbamates by metathesis reactions with PPh4Br and NaS2CNR2 in acetonitrile. All three salts could be obtained in high-purity from MeCN/Et2O solutions and crystal structures of [PPh4][S2CNEt2] and [PPh4][S2CN(CH2)5] reveal charge-separated phosphonium cations and dithiocarbamate anions. The five new crystal structures are used to compare dithiocarbamate bond distances and angles in the presence and absence of arsenic. Nuclear magnetic resonance (NMR) spectra, infrared (IR) spectra, microanalyses, and melting points of the compounds are reported.
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- 2014
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16. Correction: Ligand K-edge XAS, DFT, and TDDFT analysis of pincer linker variations in Rh(i) PNP complexes: reactivity insights from electronic structure
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Kyounghoon Lee, Haochuan Wei, Anastasia V. Blake, Courtney M. Donahue, Hyuk Yong Kwon, Jason M. Keith, and Scott R. Daly
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Inorganic Chemistry - Abstract
Correction for ‘Ligand K-edge XAS, DFT, and TDDFT analysis of pincer linker variations in Rh(i) PNP complexes: reactivity insights from electronic structure’ by Jason M. Keith, Scott R. Daly, et al., Dalton Trans., 2016, 45, 9774–9785.
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- 2016
17. Formation of argon–boron bonds in the reactions of BF+/2+ cations with neutral argon
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Catherine Calogero, Julie Le, Steven Byrne, Jana Roithová, Joseph F. Capitani, Michael Eisenberg, Edward Barbieri, Detlef Schröder, Lauren Levee, Sean Hattenbach, and Courtney M. Donahue
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Exothermic reaction ,Argon ,chemistry.chemical_element ,Condensed Matter Physics ,Photochemistry ,Endothermic process ,Ion ,Dication ,chemistry ,Excited state ,Physical chemistry ,Density functional theory ,Qualitative inorganic analysis ,Physical and Theoretical Chemistry ,Instrumentation ,Spectroscopy - Abstract
Experimental data on the reactions of argon with BF n + monocations ( n = 0–3) and BF n 2+ dications ( n = 1, 2) and dications reveal the formation of the new argon species ArBF 2+ and ArBF 2 + . Theoretical calculations on the stability of these ions using density functional theory confirm the formation of the rare-gas compounds, but their formation is only exothermic for the reaction Ar + BF 2 2+ → ArBF 2+ + F. According to theory, the corresponding neon compounds all involve endothermic pathways and could hence only be formed via involvement of excited states.
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- 2012
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18. Cover Feature: Solution and Solid‐State Ligand K‐Edge XAS Studies of PdCl 2 Diphosphine Complexes with Phenyl and Cyclohexyl Substituents (Eur. J. Inorg. Chem. 20‐21/2018)
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Jason M. Keith, Scott R. Daly, Kyounghoon Lee, Haochuan Wei, Courtney M. Donahue, and Anastasia V. Blake
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Inorganic Chemistry ,X-ray absorption spectroscopy ,Crystallography ,Ligand K-edge ,Feature (computer vision) ,Chemistry ,Solid-state ,Cover (algebra) - Published
- 2018
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19. Ligand K-edge XAS, DFT, and TDDFT analysis of pincer linker variations in Rh(<scp>i</scp>) PNP complexes: reactivity insights from electronic structure
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Jason M. Keith, Scott R. Daly, Kyounghoon Lee, Anastasia V. Blake, Haochuan Wei, and Courtney M. Donahue
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X-ray absorption spectroscopy ,Ligand K-edge ,Absorption spectroscopy ,010405 organic chemistry ,Chemistry ,Stereochemistry ,Time-dependent density functional theory ,Electronic structure ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,Crystallography ,Density functional theory ,Molecular orbital ,Pi backbonding - Abstract
Here we report P K-edge, Cl K-edge, and Rh L3-edge X-ray absorption spectroscopy (XAS) data for Rh[C5H3N-2,6-(XP(t)Bu2)2]Cl, where X = O ((tBu)PONOP; ) or CH2 ((tBu)PNP; ). Solid-state XAS data for and were compared to density functional theory (DFT) and time-dependent density functional theory (TDDFT) calculations to identify how changing the PNP pincer linker from O to CH2 affected electronic structure and bonding at Rh(i). Pronounced differences in XAS peak intensities and energies were observed. The P K-edge XAS data revealed a large increase in Rh 4dx(2)-y(2) and P 3p orbital-mixing (Rh-P σ*) in compared to , and pronounced transition energy variations reflected marked differences in orbital energies and compositions. By comparison, the Cl K-edge XAS data revealed only subtle differences in Rh-Cl covalency, although larger splitting between the Rh-Cl π* and σ* transitions was observed in . Analysis of the occupied MOs from DFT (HOMO, HOMO-1, HOMO-2, and HOMO-3) and comparison to the unoccupied MOs involved in XAS revealed a relatively uniform energy increase (ca. 0.3-0.5 eV) for all five 4d-derived molecular orbitals in Rh((tBu)PNP)Cl () compared to Rh((tBu)PONOP)Cl (). The energy shift was relatively invariant with respect to differences in orbital symmetry, bonding type (σ or π), and orbital mixing, which suggested that the increase could be attributed to electrostatic effects. The change in d-orbital energies are consistent with known reactivity differences of Rh((tBu)PONOP)(+) and Rh((tBu)PNP)(+) towards CO, H2, and CH2Cl2, and are explained here by considering how d-orbital energies affect covalent L → M σ bonding and M → L π backbonding.
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- 2016
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20. Correction to Impact of Coordination Geometry, Bite Angle, and Trans Influence on Metal–Ligand Covalency in Phenyl-Substituted Phosphine Complexes of Ni and Pd
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Courtney M. Donahue, Samuel P. McCollom, Chelsie M. Forrest, Anastasia V. Blake, Brian J. Bellott, Jason M. Keith, and Scott R. Daly
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Inorganic Chemistry ,Physical and Theoretical Chemistry - Published
- 2015
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21. Sulfur K-edge X-ray absorption spectroscopy and time-dependent density functional theory of arsenic dithiocarbamates
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Jason M. Keith, Scott R. Daly, Juan S. Lezama Pacheco, and Courtney M. Donahue
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Models, Molecular ,Absorption spectroscopy ,Molecular Conformation ,Electronic structure ,Arsenic ,Inorganic Chemistry ,Delocalized electron ,Computational chemistry ,Oscillometry ,Electrochemistry ,Computer Simulation ,Sulfhydryl Compounds ,Dithiocarbamate ,chemistry.chemical_classification ,X-ray absorption spectroscopy ,Molecular Structure ,Chemistry ,X-Rays ,Reproducibility of Results ,Time-dependent density functional theory ,Crystallography ,X-Ray Absorption Spectroscopy ,K-edge ,Salts ,Density functional theory ,Carbamates ,Electronics ,Software ,Sulfur ,Protein Binding - Abstract
S K-edge X-ray absorption spectroscopy (XAS) and time-dependent density functional theory (TDDFT) calculations were performed on a series of As[S2CNR2]3 complexes, where R2 = Et2, (CH2)5 and Ph2, to determine how dithiocarbamate substituents attached to N affect As[S2CNR2]3 electronic structure. Complimentary [PPh4][S2CNR2] salts were also studied to compare dithiocarbamate bonding in the absence of As. The XAS results indicate that changing the orientation of the alkyl substituents from trans to cis (R2 = Et2vs. (CH2)5) yields subtle variations whereas differences associated with a change from alkyl to aryl are much more pronounced. For example, despite the differences in As 4p mixing, the first features in the S K-edge XAS spectra of [PPh4][S2CNPh2] and As[S2CNPh2]3 were both shifted by 0.3 eV compared to their alkyl-substituted derivatives. DFT calculations revealed that the unique shift observed for [PPh4][S2CNPh2] is due to phenyl-induced splitting of the π* orbitals delocalized over N, C and S. A similar phenomenon accounts for the shift observed for As[S2CNPh2]3, but the presence of two unique S environments (As-S and As···S) prevented reliable analysis of As-S covalency from the XAS data. In the absence of experimental values, DFT calculations revealed a decrease in As-S orbital mixing in As[S2CNPh2]3 that stems from a redistribution of electron density to S atoms participating in weaker As···S interactions. Simulated spectra obtained from TDDFT calculations reproduce the experimental differences in the S K-edge XAS data, which suggests that the theory is accurately modeling the experimental differences in As-S orbital mixing. The results highlight how S K-edge XAS and DFT can be used cooperatively to understand the electronic structure of low symmetry coordination complexes containing S atoms in different chemical environments.
- Published
- 2014
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