1. Deletion of yeast TPK1 reduces the efficiency of non-homologous end joining DNA repair.
- Author
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Hooshyar M, Jessulat M, Burnside D, Kluew A, Babu M, and Golshani A
- Subjects
- Cyclic AMP-Dependent Protein Kinase Catalytic Subunits genetics, Cyclic AMP-Dependent Protein Kinase Catalytic Subunits metabolism, Cyclic AMP-Dependent Protein Kinases deficiency, DNA Breaks, Double-Stranded, DNA, Fungal genetics, DNA, Fungal metabolism, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Gene Deletion, Genes, Fungal, Genes, Synthetic, Genetic Association Studies, Humans, Protein Interaction Maps, Cyclic AMP-Dependent Protein Kinases genetics, Cyclic AMP-Dependent Protein Kinases metabolism, DNA End-Joining Repair genetics, DNA End-Joining Repair physiology, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Non-homologous end joining (NHEJ) is a highly conserved mechanism of DNA double-stranded break (DSB) repair. Here we utilize a computational protein-protein interaction method to identify human PRKACB as a potential candidate interacting with NHEJ proteins. We show that the deletion of its yeast homolog, TPK1 that codes for the protein kinase A catalytic subunit reduces the efficiency of NHEJ repair of breaks with overhangs and blunt ends in plasmid-based repair assays. Additionally, tpk1Δ mutants showed defects in the repair of chromosomal breaks induced by HO-site specific endonuclease. Our double deletion mutant analyses suggest that TPK1 and YKU80, a key player in NHEJ could function in parallel pathways. Altogether, here we report a novel involvement for TPK1 in NHEJ., Competing Interests: Declaration of competing interest All authors declare that they don’t have any conflict of interest. This article does not contain any studies with human participants or animals performed by any of the authors., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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