853 results on '"Daggett, Valerie"'
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2. Mechanistic insights into the role of amyloid-β in innate immunity
3. Molecular Dynamics Methods for Antibody Design
4. Cardiac myosin activation with 2-deoxy-ATP via increased electrostatic interactions with actin
5. Human islet amyloid polypeptide‐induced β‐cell cytotoxicity is linked to formation of α‐sheet structure
6. Human islet amyloid polypeptide‐induced β‐cell cytotoxicity is linked to formation of α‐sheet structure.
7. α-Sheet secondary structure in amyloid β-peptide drives aggregation and toxicity in Alzheimer’s disease
8. Ensemble versus Single-Molecule Protein Unfolding
9. Characterization of a Possible Amyloidogenic Precursor in Glutamine-Repeat Neurodegenerative Diseases
10. Pauling and Corey's α-Pleated Sheet Structure May Define the Prefibrillar Amyloidogenic Intermediate in Amyloid Disease
11. Testing Protein-Folding Simulations by Experiment: B Domain of Protein A
12. Demonstration of a Low-Energy On-Pathway Intermediate in a Fast-Folding Protein by Kinetics, Protein Engineering, and Simulation
13. Counteraction of Urea-Induced Protein Denaturation by Trimethylamine N-Oxide: A Chemical Chaperone at Atomic Resolution
14. From Conversion to Aggregation: Protofibril Formation of the Prion Protein
15. Ultrafast Folding of α 3 D: A de novo Designed Three-Helix Bundle Protein
16. Unifying Features in Protein-Folding Mechanisms
17. The Molecular Basis for the Chemical Denaturation of Proteins by Urea
18. Simulations of Biomolecules: Characterization of the Early Steps in the pH-Induced Conformational Conversion of the Hamster, Bovine and Human Forms of the Prion Protein
19. Using Flexible Loop Mimetics to Extend Φ-Value Analysis to Secondary Structure Interactions
20. Protein Folding from a Highly Disordered Denatured State: The Folding Pathway of Chymotrypsin Inhibitor 2 at Atomic Resolution
21. Mapping the Early Steps in the pH-Induced Conformational Conversion of the Prion Protein
22. Staphylococcal Protein A: Unfolding Pathways, Unfolded States, and Differences between the B and E Domains
23. Synergy between Simulation and Experiment in Describing the Energy Landscape of Protein Folding
24. Characterization of Residual Structure in the Thermally Denatured State of Barnase by Simulation and Experiment: Description of the Folding Pathway
25. SOBA: Development and testing of a soluble oligomer binding assay for detection of amyloidogenic toxic oligomers
26. The role of α-sheet structure in amyloidogenesis: characterization and implications
27. Protein Folding: Molecular Dynamics Simulations
28. Designed α-sheet peptides disrupt uropathogenic E. coli biofilms rendering bacteria susceptible to antibiotics and immune cells.
29. Protein Folding: Molecular Dynamics Simulations
30. Molecular Dynamics as an Approach to Study Prion Protein Misfolding and the Effect of Pathogenic Mutations
31. Amyloid-β Oligomers: Multiple Moving Targets
32. Molecular basis for the extensibility of elastin
33. Multimolecule test-tube simulations of protein unfolding and aggregation
34. Malleability of folding intermediates in the homeodomain superfamily
35. Designed α-sheet peptides suppress amyloid formation in Staphylococcus aureus biofilms
36. Dynameomics: protein dynamics and unfolding across fold space
37. The Intrinsic Conformational Propensities of the 20 Naturally Occurring Amino Acids and Reflection of These Propensities in Proteins
38. Conformational Entropy of Alanine versus Glycine in Protein Denatured States
39. Modeling Protein Folding Pathways
40. Characterization of the Transition State of Protein Unfolding by Use of Molecular Dynamics: Chymotrypsin Inhibitor 2
41. A Model of the Molten Globule State from Molecular Dynamics Simulations
42. Nature versus design: the conformational propensities of D-amino acids and the importance of side chain chirality
43. Dynameomics: Data-driven methods and models for utilizing large-scale protein structure repositories for improving fragment-based loop prediction
44. Protein simulation data in the relational model
45. Modulation of post-powerstroke dynamics in myosin II by 2′-deoxy-ADP
46. Polymorphisms and disease: hotspots of inactivation in methyltransferases
47. Distance restraints from crosslinking mass spectrometry: Mining a molecular dynamics simulation database to evaluate lysine–lysine distances
48. DIVE: a data intensive visualization engine
49. Species variation in PrPSc protofibril models
50. Early steps in thermal unfolding of superoxide dismutase 1 are similar to the conformational changes associated with the ALS-associated A4V mutation
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