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1. Outbreak of Highly Pathogenic Avian Influenza A(H5N1) Viruses in U.S. Dairy Cattle and Detection of Two Human Cases--United States, 2024

Author

Garg, Shikha, Reed, Carrie, Davis, C. Todd, Uyeki, Timothy M., Behravesh, Casey Barton, Kniss, Krista, Budd, Alicia, Biggerstaff, Matthew, Adjemian, Jennifer, Barnes, John R., Kirby, Marie K., Basler, Colin, Szablewski, Christine M., Richmond-Crum, Malia, Burns, Erin, Limbago, Brandi, Daskalakis, Demetre C., Armstrong, Kimberly, Boucher, David, Shimabukuro, Tom T., Jhung, Michael A., Olsen, Sonja J., and Dugan, Vivien

Subjects
United States. Department of Agriculture, United States. Food and Drug Administration, United States. National Institute of Allergy and Infectious Diseases, Avian influenza -- Health aspects, Milk -- Health aspects, Avian influenza viruses -- Health aspects, Dairy cattle -- Health aspects, Dairy farming -- Health aspects, Conjunctivitis -- Health aspects, Public health -- Health aspects, Virus diseases -- Health aspects, Health
Abstract

On May 24, 2024, this report was posted as an MMWR Early Release on the MMWR website (https://www.cdc.gov/mmwr). Investigation and Findings Identification of Two Human Cases of Influenza A(H5) Virus [...]

Published
2024

2. Interpretation of molecular detection of avian influenza A virus in respiratory specimens collected from live bird market workers in Dhaka, Bangladesh: infection or contamination?

Author

Hassan, Md Zakiul, Sturm-Ramirez, Katharine, Islam, Md Saiful, Afreen, Sadia, Rahman, Mohammed Ziaur, Kafi, Mohammad Abdullah Heel, Chowdhury, Sukanta, Khan, Salah Uddin, Rahman, Mustafizur, Nasreen, Sharifa, Davis, C. Todd, Levine, Min Z., Rahman, Mahmudur, Luby, Stephen P., Azziz-Baumgartner, Eduardo, Iuliano, A.D., Uyeki, Timothy M., and Gurley, Emily S.

Published
2023
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3. Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines

Author

Wang, Li, Kainulainen, Markus H., Jiang, Nannan, Di, Han, Bonenfant, Gaston, Mills, Lisa, Currier, Michael, Shrivastava-Ranjan, Punya, Calderon, Brenda M., Sheth, Mili, Mann, Brian R., Hossain, Jaber, Lin, Xudong, Lester, Sandra, Pusch, Elizabeth A., Jones, Joyce, Cui, Dan, Chatterjee, Payel, Jenks, M. Harley, Morantz, Esther K., Larson, Gloria P., Hatta, Masato, Harcourt, Jennifer L., Tamin, Azaibi, Li, Yan, Tao, Ying, Zhao, Kun, Lacek, Kristine, Burroughs, Ashley, Wang, Wei, Wilson, Malania, Wong, Terianne, Park, So Hee, Tong, Suxiang, Barnes, John R., Tenforde, Mark W., Self, Wesley H., Shapiro, Nathan I., Exline, Matthew C., Files, D. Clark, Gibbs, Kevin W., Hager, David N., Patel, Manish, Halpin, Alison L., McMullan, Laura K., Lee, Justin S., Xia, Hongjie, Xie, Xuping, Shi, Pei-Yong, Davis, C. Todd, Spiropoulou, Christina F., Thornburg, Natalie J., Oberste, M. Steven, Dugan, Vivien G., Wentworth, David E., and Zhou, Bin

Published
2022
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4. Changes in influenza and other respiratory virus activity during the COVID-19 pandemic—United States, 2020–2021

Author

Olsen, Sonja J., Winn, Amber K., Budd, Alicia P., Prill, Mila M., Steel, John, Midgley, Claire M., Kniss, Krista, Burns, Erin, Rowe, Thomas, Foust, Angela, Jasso, Gabriela, Merced-Morales, Angiezel, Davis, C. Todd, Jang, Yunho, Jones, Joyce, Daly, Peter, Gubareva, Larisa, Barnes, John, Kondor, Rebecca, Sessions, Wendy, Smith, Catherine, Wentworth, David E., Garg, Shikha, Havers, Fiona P., Fry, Alicia M., Hall, Aron J., Brammer, Lynnette, and Silk, Benjamin J.

Published
2021
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5. Update : Influenza Activity — United States and Worldwide, May 19–September 28, 2019, and Composition of the 2020 Southern Hemisphere Influenza Vaccine

Author

Epperson, Scott, Davis, C. Todd, Brammer, Lynnette, Elal, Anwar Isa Abd, Ajayi, Noreen, Barnes, John, Budd, Alicia P., Burns, Erin, Daly, Peter, Dugan, Vivien G., Fry, Alicia M., Jang, Yunho, Johnson, Sara Jo, Kniss, Krista, Kondor, Rebecca, Grohskopf, Lisa A., Gubareva, Larisa, Merced-Morales, Angiezel, Sessions, Wendy, Stevens, James, Wentworth, David E., Xu, Xiyan, and Jernigan, Daniel

Published
2019

7. A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses

Author

Anderson, Tavis K, Macken, Catherine A, Lewis, Nicola S, Scheuermann, Richard H, Van Reeth, Kristien, Brown, Ian H, Swenson, Sabrina L, Simon, Gaëlle, Saito, Takehiko, Berhane, Yohannes, Ciacci-Zanella, Janice, Pereda, Ariel, Davis, C Todd, Donis, Ruben O, Webby, Richard J, and Vincent, Amy L

Subjects
Microbiology, Biological Sciences, Pneumonia & Influenza, Immunization, Genetics, Influenza, Emerging Infectious Diseases, Vaccine Related, Infection, H1N1, H1N2, influenza A virus, molecular epidemiology, nomenclature, swine, virus evolution
Abstract

The H1 subtype of influenza A viruses (IAVs) has been circulating in swine since the 1918 human influenza pandemic. Over time, and aided by further introductions from nonswine hosts, swine H1 viruses have diversified into three genetic lineages. Due to limited global data, these H1 lineages were named based on colloquial context, leading to a proliferation of inconsistent regional naming conventions. In this study, we propose rigorous phylogenetic criteria to establish a globally consistent nomenclature of swine H1 virus hemagglutinin (HA) evolution. These criteria applied to a data set of 7,070 H1 HA sequences led to 28 distinct clades as the basis for the nomenclature. We developed and implemented a web-accessible annotation tool that can assign these biologically informative categories to new sequence data. The annotation tool assigned the combined data set of 7,070 H1 sequences to the correct clade more than 99% of the time. Our analyses indicated that 87% of the swine H1 viruses from 2010 to the present had HAs that belonged to 7 contemporary cocirculating clades. Our nomenclature and web-accessible classification tool provide an accurate method for researchers, diagnosticians, and health officials to assign clade designations to HA sequences. The tool can be updated readily to track evolving nomenclature as new clades emerge, ensuring continued relevance. A common global nomenclature facilitates comparisons of IAVs infecting humans and pigs, within and between regions, and can provide insight into the diversity of swine H1 influenza virus and its impact on vaccine strain selection, diagnostic reagents, and test performance, thereby simplifying communication of such data. IMPORTANCE A fundamental goal in the biological sciences is the definition of groups of organisms based on evolutionary history and the naming of those groups. For influenza A viruses (IAVs) in swine, understanding the hemagglutinin (HA) genetic lineage of a circulating strain aids in vaccine antigen selection and allows for inferences about vaccine efficacy. Previous reporting of H1 virus HA in swine relied on colloquial names, frequently with incriminating and stigmatizing geographic toponyms, making comparisons between studies challenging. To overcome this, we developed an adaptable nomenclature using measurable criteria for historical and contemporary evolutionary patterns of H1 global swine IAVs. We also developed a web-accessible tool that classifies viruses according to this nomenclature. This classification system will aid agricultural production and pandemic preparedness through the identification of important changes in swine IAVs and provides terminology enabling discussion of swine IAVs in a common context among animal and human health initiatives.

Published
2016

8. Pathogenesis and Transmission Assessment of 3 Swine-Origin Influenza A(H3N2) Viruses With Zoonotic Risk to Humans Isolated in the United States, 2017–2020.

Author

Sun, Xiangjie, Belser, Jessica A, Pulit-Penaloza, Joanna A, Brock, Nicole, Pappas, Claudia, Zanders, Natosha, Jang, Yunho, Jones, Joyce, Tumpey, Terrence M, Davis, C Todd, and Maines, Taronna R

Subjects
H7N9 Influenza, AIRBORNE infection, ANIMAL herds, INFLUENZA, FERRET, PATHOGENESIS
Abstract

The sporadic occurrence of human infections with swine-origin influenza A(H3N2) viruses and the continual emergence of novel A(H3N2) viruses in swine herds underscore the necessity for ongoing assessment of the pandemic risk posed by these viruses. Here, we selected 3 recent novel swine-origin A(H3N2) viruses isolated between 2017 to 2020, bearing hemagglutinins from the 1990.1, 2010.1, or 2010.2 clades, and evaluated their ability to cause disease and transmit in a ferret model. We conclude that despite considerable genetic variances, all 3 contemporary swine-origin A(H3N2) viruses displayed a capacity for robust replication in the ferret respiratory tract and were also capable of limited airborne transmission. These findings highlight the continued public health risk of swine-origin A(H3N2) strains, especially in human populations with low cross-reactive immunity. [ABSTRACT FROM AUTHOR]

Published
2024
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9. Avian influenza A(H5) virus circulation in live bird markets in Vietnam, 2017–2022

Author

Nguyen, Diep, primary, Sumner, Kelsey, additional, Nguyen, Thoa, additional, Phan, Minh, additional, Hoang, Tien, additional, Vo, Chuong, additional, Nguyen, Tho, additional, Nguyen, Phuong, additional, Yang, Genyan, additional, Jang, Yunho, additional, Jones, Joyce, additional, Olsen, Sonja, additional, Gould, Philip, additional, Nguyen, Long, additional, and Davis, C. Todd, additional

Published
2023
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10. Update : Influenza Activity — United States and Worldwide, May 20–October 13, 2018

Author

Chow, Eric J., Davis, C. Todd, Elal, Anwar Isa Abd, Alabi, Noreen, Azziz-Baumgartner, Eduardo, Barnes, John, Blanton, Lenee, Brammer, Lynnette, Budd, Alicia P., Burns, Erin, Davis, William W., Dugan, Vivien G., Fry, Alicia M., Garten, Rebecca, Grohskopf, Lisa A., Gubareva, Larisa, Jang, Yunho, Jones, Joyce, Kniss, Krista, Lindstrom, Stephen, Mustaquim, Desiree, Porter, Rachael, Rolfes, Melissa, Sessions, Wendy, Taylor, Calli, Wentworth, David E., Xu, Xiyan, Zanders, Natosha, Katz, Jacqueline, and Jernigan, Daniel

Published
2018

11. Influenza A(H3N2) Variant Virus Outbreak at Three Fairs — Maryland, 2017

Author

Duwell, Monique M., Blythe, David, Radebaugh, Michael W., Kough, Erin M., Bachaus, Brian, Crum, David A., Perkins, Keith A., Blanton, Lenee, Davis, C. Todd, Jang, Yunho, Vincent, Amy, Chang, Jennifer, Abney, Dianna E., Gudmundson, Lisa, Brewster, Meenakshi G., Polsky, Larry, Rose, David C., and Feldman, Katherine A.

Published
2018

12. Improving pandemic influenza risk assessment.

Author

Russell, Colin A, Kasson, Peter M, Donis, Ruben O, Riley, Steven, Dunbar, John, Rambaut, Andrew, Asher, Jason, Burke, Stephen, Davis, C Todd, Garten, Rebecca J, Gnanakaran, Sandrasegaram, Hay, Simon I, Herfst, Sander, Lewis, Nicola S, Lloyd-Smith, James O, Macken, Catherine A, Maurer-Stroh, Sebastian, Neuhaus, Elizabeth, Parrish, Colin R, Pepin, Kim M, Shepard, Samuel S, Smith, David L, Suarez, David L, Trock, Susan C, Widdowson, Marc-Alain, George, Dylan B, Lipsitch, Marc, and Bloom, Jesse D

Subjects
Humans, Influenza A virus, Risk Assessment, Public Health, Base Sequence, Geography, Models, Biological, Influenza, Human, Biological Evolution, Pandemics, Epidemiological Monitoring, emergence, evolutionary biology, genomics, human, infectious disease, influenza, microbiology, pandemic, viruses, Models, Biological, Influenza, Human, Biochemistry and Cell Biology
Abstract

Assessing the pandemic risk posed by specific non-human influenza A viruses is an important goal in public health research. As influenza virus genome sequencing becomes cheaper, faster, and more readily available, the ability to predict pandemic potential from sequence data could transform pandemic influenza risk assessment capabilities. However, the complexities of the relationships between virus genotype and phenotype make such predictions extremely difficult. The integration of experimental work, computational tool development, and analysis of evolutionary pathways, together with refinements to influenza surveillance, has the potential to transform our ability to assess the risks posed to humans by non-human influenza viruses and lead to improved pandemic preparedness and response.

Published
2014

15. Reported Global Avian Influenza Detections Among Humans and Animals During 2013-2022: Comprehensive Review and Analysis of Available Surveillance Data

Author

Szablewski, Christine M, primary, Iwamoto, Chelsea, additional, Olsen, Sonja J, additional, Greene, Carolyn M, additional, Duca, Lindsey M, additional, Davis, C Todd, additional, Coggeshall, Kira C, additional, Davis, William W, additional, Emukule, Gideon O, additional, Gould, Philip L, additional, Fry, Alicia M, additional, Wentworth, David E, additional, Dugan, Vivien G, additional, Kile, James C, additional, and Azziz-Baumgartner, Eduardo, additional

Published
2023
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16. Pathogenesis and transmission assessment of three swine-origin influenza A(H3N2) viruses with zoonotic risk to humans isolated in the U.S from 2017-2020

Author

Sun, Xiangjie, primary, Belser, Jessica A, additional, Pulit-Penaloza, Joanna A, additional, Brock, Nicole, additional, Pappas, Claudia, additional, Zanders, Natosha, additional, Jang, Yunho, additional, Jones, Joyce, additional, Tumpey, Terrence M, additional, Davis, C Todd, additional, and Maines, Taronna R, additional

Published
2023
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17. Update : Influenza Activity — United States and Worldwide, May 21–September 23, 2017

Author

Blanton, Lenee, Wentworth, David E., Alabi, Noreen, Azziz-Baumgartner, Eduardo, Barnes, John, Brammer, Lynnette, Burns, Erin, Davis, C. Todd, Dugan, Vivien G., Fry, Alicia M., Garten, Rebecca, Grohskopf, Lisa A., Gubareva, Larisa, Kniss, Krista, Lindstrom, Stephen, Mustaquim, Desiree, Olsen, Sonja J., Roguski, Katherine, Taylor, Calli, Trock, Susan, Xu, Xiyan, Katz, Jacqueline, and Jernigan, Daniel

Published
2017

18. Highly Pathogenic Avian Influenza A(H5N1) Viruses at the Animal–Human Interface in Vietnam, 2003–2010

Author

Creanga, Adrian, Le Khanh Hang, Nguyen, Cuong, Vuong Duc, Nguyen, Ha T., Phuong, Hoang Vu Mai, Le Thi Thanh, Thach, Nguyen Co, Hien, Pham Thi, Tung, Nguyen, Jang, Yunho, Balish, Amanda, Dang, Nguyen Hoang, Duong, Mai Thuy, Huong, Ngo Thu, Hoa, Do Ngoc, Tho, Nguyen Dang, Klimov, Alexander, Kapella, Bryan K., Gubareva, Larisa, Kile, James C., Hien, Nguyen Tran, Le Quynh Mai, and Davis, C. Todd

Published
2017

19. Assessment of Molecular, Antigenic, and Pathological Features of Canine Influenza A(H3N2) Viruses That Emerged in the United States

Author

Pulit-Penaloza, Joanna A., Simpson, Natosha, Yang, Hua, Creager, Hannah M., Jones, Joyce, Carney, Paul, Belser, Jessica A., Yang, Genyan, Chang, Jessie, Zeng, Hui, Thor, Sharmi, Jang, Yunho, Killian, Mary Lea, Jenkins-Moore, Melinda, Janas-Martindale, Alicia, Dubovi, Edward, Wentworth, David E., Stevens, James, Tumpey, Terrence M., Davis, C. Todd, and Maines, Taronna R.

Published
2017

20. Mild Respiratory Illness Among Young Children Caused by Highly Pathogenic Avian Influenza A (H5N1) Virus Infection in Dhaka, Bangladesh, 2011

Author

Chakraborty, Apurba, Rahman, Mahmudur, Hossain, M. Jahangir, Khan, Salah Uddin, Haider, M. Sabbir, Sultana, Rebeca, Rimi, Nadia Ali, Islam, M. Saiful, Haider, Najmul, Islam, Ausraful, Shanta, Ireen Sultana, Sultana, Tahmina, Mamun, Abdullah Al, Homaira, Nusrat, Goswami, Doli, Nahar, Kamrun, Alamgir, A. S. M., Rahman, Mustafizur, Jamil, Khondokar Mahbuba, Azziz-Baumgartner, Eduardo, Simpson, Natosha, Shu, Bo, Lindstrom, Stephen, Gerloff, Nancy, Davis, C. Todd, Katz, Jaqueline M., Mikolon, Andrea, Uyeki, Timothy M., Luby, Stephen P., and Sturm-Ramirez, Katharine

Published
2017

21. Update : Increase in Human Infections with Novel Asian Lineage Avian Influenza A(H7N9) Viruses During the Fifth Epidemic — China, October 1, 2016–August 7, 2017

Author

Kile, James C., Ren, Ruiqi, Liu, Liqi, Greene, Carolyn M., Roguski, Katherine, Iuliano, A. Danielle, Jang, Yunho, Jones, Joyce, Thor, Sharmi, Song, Ying, Zhou, Suizan, Trock, Susan C., Dugan, Vivien, Wentworth, David E., Levine, Min Z., Uyeki, Timothy M., Katz, Jacqueline M., Jernigan, Daniel B, Olsen, Sonja J., Fry, Alicia M., Azziz-Baumgartner, Eduardo, and Davis, C. Todd

Published
2017

23. Assessing Change in Avian Influenza A(H7N9) Virus Infections During the Fourth Epidemic — China, September 2015–August 2016

Author

Xiang, Nijuan, Li, Xiyan, Ren, Ruiqi, Wang, Dayan, Zhou, Suizan, Greene, Carolyn M., Song, Ying, Zhou, Lei, Yang, Lei, Davis, C. Todd, Zhang, Ye, Wang, Yali, Zhao, Jian, Li, Xiaodan, Iuliano, A. Danielle, Havers, Fiona, Olsen, Sonja J., Uyeki, Timothy M., Azziz-Baumgartner, Eduardo, Trock, Susan, Liu, Bo, Sui, Haitian, Huang, Xu, Zhang, Yanping, Ni, Daxin, Feng, Zijian, Shu, Yuelong, and Li, Qun

Published
2016

24. Outbreak of Influenza A(H3N2) Variant Virus Infections Among Persons Attending Agricultural Fairs Housing Infected Swine — Michigan and Ohio, July–August 2016

Author

Schicker, Rebekah S., Rossow, John, Eckel, Seth, Fisher, Nicolas, Bidol, Sally, Tatham, Lilith, Matthews-Greer, Janice, Sohner, Kevin, Bowman, Andrew S., Avrill, James, Forshey, Tony, Blanton, Lenee, Davis, C. Todd, Schiltz, John, Skorupski, Susan, Berman, LaShondra, Jang, Yunho, Bresee, Joseph S., Lindstrom, Stephen, Trock, Susan C., Wentworth, David, Fry, Alicia M., Fijter, Sietske de, Signs, Kimberly, DiOrio, Mary, Olsen, Sonja J., and Biggerstaff, Matthew

Published
2016

25. Influenza a(H3N2) virus in swine at agricultural fairs and transmission to Humans, Michigan and Ohio, USA, 2016

Author

Bowman, Andrew S., Walia, Rasna R., Nolting, Jacqueline M., Vincent, Amy L., Killian, Mary Lea, Zentkovich, Michele M., Lorbach, Joshua N., Lauterbach, Sarah E., Anderson, Tavis K., Davis, C. Todd, Zanders, Natosha, Jones, Joyce, Jang, Yunho, Lynch, Brian, Rodriguez, Marisela R., Blanton, Lenee, Lindstrom, Stephen E., Wentworth, David E., Schiltz, John, Averiii, James J., and Forshey, Tony

Subjects
Ohio -- Health aspects, Michigan -- Health aspects, Epidemics -- Forecasts and trends -- United States, Swine influenza -- Distribution, Human-animal relationships, Market trend/market analysis, Company distribution practices, Health
Abstract

Influenza A virus infects many animal species. Zoonotic transmission allows for the introduction of novel influenza A virus strains to the human population, which has the potential to cause the [...]

Published
2017
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26. Global Avian Influenza Infections among Humans and Animals during 2013–2022 (Preprint)

Author

Szablewski, Christine M., primary, Iwamoto, Chelsea, additional, Olsen, Sonja J., additional, Greene, Carolyn M., additional, Duca, Lindsey M., additional, Davis, C. Todd, additional, Coggeshall, Kira C., additional, Davis, William W., additional, Emukule, Gideon O., additional, Gould, Philip L., additional, Fry, Alicia M., additional, Wentworth, David E., additional, Dugan, Vivien G., additional, Kile, James C., additional, and Azziz-Baumgartner, Eduardo, additional

Published
2023
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27. Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans

Author

Souza, Carine K., primary, Kimble, J. Brian, additional, Anderson, Tavis K., additional, Arendsee, Zebulun W., additional, Hufnagel, David E., additional, Young, Katharine M., additional, Gauger, Phillip C., additional, Lewis, Nicola S., additional, Davis, C. Todd, additional, Thor, Sharmi, additional, and Vincent Baker, Amy L., additional

Published
2023
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28. Cross-neutralization and viral fitness of SARS-CoV-2 Omicron sublineages

Author

Xia, Hongjie, primary, Yeung, Jason, additional, Kalveram, Birte, additional, Bills, Cody J., additional, Chen, John Yun-Chung, additional, Kurhade, Chaitanya, additional, Zou, Jing, additional, Widen, Steven G., additional, Mann, Brian R., additional, Kondor, Rebecca, additional, Davis, C. Todd, additional, Zhou, Bin, additional, Wentworth, David E., additional, Xie, Xuping, additional, and Shi, Pei-Yong, additional

Published
2022
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29. Influenza A(H7N9) Pandemic Preparedness: Assessment of the Breadth of Heterologous Antibody Responses to Emerging Viruses from Multiple Pre-Pandemic Vaccines and Population Immunity

Author

Levine, Min Z., primary, Holiday, Crystal, additional, Bai, Yaohui, additional, Zhong, Weimin, additional, Liu, Feng, additional, Jefferson, Stacie, additional, Gross, F. Liaini, additional, Tzeng, Wen-pin, additional, Fries, Louis, additional, Smith, Gale, additional, Boutet, Philippe, additional, Friel, Damien, additional, Innis, Bruce L., additional, Mallett, Corey P., additional, Davis, C. Todd, additional, Wentworth, David E., additional, York, Ian A., additional, Stevens, James, additional, Katz, Jacqueline M., additional, and Tumpey, Terrence, additional

Published
2022
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30. Interspecies Transmission from Pigs to Ferrets of Antigenically Distinct Swine H1 Influenza A Viruses with Reduced Reactivity to Candidate Vaccine Virus Antisera as Measures of Relative Zoonotic Risk

Author

Kimble, J. Brian, primary, Souza, Carine K., additional, Anderson, Tavis K., additional, Arendsee, Zebulun W., additional, Hufnagel, David E., additional, Young, Katharine M., additional, Lewis, Nicola S., additional, Davis, C. Todd, additional, Thor, Sharmi, additional, and Vincent Baker, Amy L., additional

Published
2022
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31. Interspecies transmission from pigs to ferrets of antigenically distinct swine H1 influenza A viruses with loss in reactivity to human vaccine virus antisera as measures of relative zoonotic risk

Author

Kimble, J. Brian, primary, Souza, Carine K., additional, Anderson, Tavis K., additional, Arendsee, Zebulun W., additional, Hufnagel, David E., additional, Young, Katharine M., additional, Lewis, Nicola S., additional, Davis, C. Todd, additional, and Vincent Baker, Amy L., additional

Published
2022
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34. Performance characteristics of qualified cell lines for isolation and propagation of influenza viruses for vaccine manufacturing

Author

Chen, Li-Mei, Davis, C. Todd, Foust, Angie, Hossain, M. Jaber, Johnson, Adam, Klimov, Alexander, Loughlin, Rosette, Xu, Xiyan, Tsai, Theodore, Blayer, Simone, Trusheim, Heidi, Colegate, Tony, Fox, John, Taylor, Beverly, Hussain, Althaf, Barr, Ian, Baas, Chantal, Louwerens, Jaap, Geuns, Ed, Lee, Min-Shi, Venhuizen, Lodewijk, Neumeier, Elisabeth, Ziegler, Thedi, and Donis, Ruben O.

Published
2014
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35. Pathogenesis and transmission of human seasonal and swine-origin A(H1) influenza viruses in the ferret model

Author

Pulit-Penaloza, Joanna A., primary, Brock, Nicole, additional, Jones, Joyce, additional, Belser, Jessica A., additional, Jang, Yunho, additional, Sun, Xiangjie, additional, Thor, Sharmi, additional, Pappas, Claudia, additional, Zanders, Natosha, additional, Tumpey, Terrence M., additional, Davis, C. Todd, additional, and Maines, Taronna R., additional

Published
2022
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38. Antigenic characterization of highly pathogenic avian influenza A(H5N1) viruses with chicken and ferret antisera reveals clade-dependent variation in hemagglutination inhibition profiles

Author

Thi Nguyen, Diep, Shepard, Samuel S., Burke, David Francis, Jones, Joyce, Thor, Sharmi, Nguyen, Long Van, Nguyen, Tho Dang, Balish, Amanda, Hoang, Dang Nguyen, To, Thanh Long, Iqbal, Munir, Wentworth, David E., Spackman, Erica, van Doorn, H Rogier, Davis, C. Todd, and Bryant, Juliet E.

Published
2018
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40. Detecting spread of avian influenza A(H7N9) virus beyond China

Author

Millman, Alexander J., Havers, Fiona, Iuliano, A. Danielle, Davis, C. Todd, Sar, Borann, Sovann, Ly, Chin, Savuth, Corwin, Andrew L., Vongphrachanh, Phengta, Douangngeun, Bounlom, Lindblade, Kim A., Chittaganpitch, Malinee, Kaewthong, Viriya, Kile, James C., Nguyen, Hien T., Pham, Dong V., Donis, Ruben O., and Widdowson, Marc-Alain

Subjects
United States. Centers for Disease Control and Prevention -- International economic relations, Avian influenza, Avian influenza viruses, Health, World Health Organization
Abstract

Novel low pathogenic avian influenza (LPAI) A(H7N9) virus emerged in February 2013 and, as of March 3, 2015, a total of 602 laboratory-confirmed human infections, including 227 deaths, had been [...]

Published
2015
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43. Antigenic and Genetic Characteristics of Swine-Origin 2009 A(H1N1) Influenza Viruses Circulating in Humans

Author

Garten, Rebecca J., Davis, C. Todd, Russell, Colin A., Shu, Bo, Lindstrom, Stephen, Balish, Amanda, Sessions, Wendy M., Xu, Xiyan, Skepner, Eugene, Deyde, Varough, Okomo-Adhiambo, Margaret, Gubareva, Larisa, Barnes, John, Smith, Catherine B., Emery, Shannon L., Hillman, Michael J., Rivailler, Pierre, Smagala, James, de Graaf, Miranda, Burke, David F., Fouchier, Ron A. M., Pappas, Claudia, Alpuche-Aranda, Celia M., López-Gatell, Hugo, Olivera, Hiram, López, Irma, Myers, Christopher A., Faix, Dennis, Blair, Patrick J., Yu, Cindy, Keene, Kimberly M., Dotson, P. David, Boxrud, David, Sambol, Anthony R., Abid, Syed H., St. George, Kirsten, Bannerman, Tammy, Moore, Amanda L., Stringer, David J., Blevins, Patricia, Demmler-Harrison, Gail J., Ginsberg, Michele, Kriner, Paula, Waterman, Steve, Smole, Sandra, Guevara, Hugo F., Belongia, Edward A., Clark, Patricia A., Beatrice, Sara T., Donis, Ruben, Katz, Jacqueline, Finelli, Lyn, Bridges, Carolyn B., Shaw, Michael, Jernigan, Daniel B., Uyeki, Timothy M., Smith, Derek J., Klimov, Alexander I., and Cox, Nancy J.

Published
2009
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44. First Human Infection of Avian Influenza A(H5N6) Virus Reported in Lao People’s Democratic Republic, February-March 2021

Author

Sengkeopraseuth, Bounthanom, primary, Co, Kim, additional, Leuangvilay, Phetdavanh, additional, Mott, Joshua, additional, Khongsamphanh, Bounyasith, additional, Oulay, Virasack Som, additional, Tsuyuoka, Reiko, additional, Chiew, May, additional, Ketmayoon, Pakapak, additional, Jones, Joyce, additional, Pusch, Elizabeth, additional, Jang, Yunho, additional, Barnes, John, additional, Davis, C. Todd, additional, Phommachanh, Phouvong, additional, Khamphaphongphane, Bouaphanh, additional, Olsen, Sonja, additional, and Xangsayarath, Phonepadith, additional

Published
2021
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45. Full-genome analysis of avian influenza A(H5N1) virus from a human, North America, 2013

Author

Pabbaraju, Kanti, Tellier, Raymond, Wong, Sallene, Li, Yan, Bastien, Nathalie, Tang, Julian W., Drews, Steven J., Jang, Yunho, Davis, C. Todd, Fonseca, Kevin, and Tipples, Graham A.

Subjects
Avian influenza -- Analysis -- Health aspects, Genomics -- Analysis -- Health aspects, Avian influenza viruses -- Analysis -- Health aspects, Genomes -- Analysis -- Health aspects, Lectins -- Analysis -- Health aspects, Health
Abstract

Since the 1997 emergence of highly pathogenic avian influenza (HPAI) A(H5N1) virus in Hong Kong, China, 648 HPAI A(H5N1) infections and 384 associated deaths in humans have been reported. During [...]

Published
2014
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46. Genetic characterization of clade 2.3.2.1 avian influenza a(H5N1) viruses, Indonesia, 2012

Author

Dharmayanti, Ni Luh Putu Indi, Hartawan, Risza, Wibawa, Hendra, Balish, Amanda, Donis, Ruben, Davis, C. Todd, and Samaan, Gina

Subjects
Avian influenza -- Health aspects -- Analysis, Avian influenza viruses -- Health aspects -- Analysis, Health, World Health Organization
Abstract

Highly pathogenic avian influenza A(H5N1) virus has circulated in poultry in Indonesia since 2003 (1,2). The phylogeny of A(H5N1) viruses detected during 2003-2011 indicated all genes descended from 1 ancestral [...]

Published
2014
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47. Highly pathogenic avian influenza A(H7N3) virus in poultry workers, Mexico, 2012

Author

Lopez-Martinez, Irma, Balish, Amanda, Barrera-Badillo, Gisela, Jones, Joyce, Nunez-Garcia, Tatiana E., Jang, Yunho, Aparicio-Antonio, Rodrigo, Azziz-Baumgartner, Eduardo, Belser, Jessica A., Ramirez-Gonzalez, Jose E., Pedersen, Janice C., Ortiz-Alcantara, Joanna, Gonzalez-Duran, Elizabeth, Shu, Bo, Emery, Shannon L., Poh, Mee K., Reyes-Teran, Gustavo, Vazquez-Perez, Joel A., Avila-Rios, Santiago, Uyeki, Timothy, Lindstrom, Stephen, Villanueva, Julie, Tokars, Jerome, Ruiz-Matus, Cuitlahuac, Gonzalez-Roldan, Jesus F., Schmitt, Beverly, Klimov, Alexander, Cox, Nancy, Kuri-Morales, Pablo, Davis, C. Todd, and Diaz-Quinonez, Jose Alberto

Subjects
Mexico -- Health aspects, Avian influenza viruses -- Health aspects -- Genetic aspects, Viral genetics -- Research, Conjunctivitis -- Causes of -- Genetic aspects, Poultry industry -- Officials and employees, RNA -- Health aspects, Agricultural laborers -- Health aspects, Health
Abstract

Although wild birds might be infected with influenza A(H7) viruses, outbreaks among poultry are rare. Human infection with influenza A(H7) virus is rare but has been documented after direct contact [...]

Published
2013
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48. Changes in Influenza and Other Respiratory Virus Activity During the COVID-19 Pandemic — United States, 2020–2021

Author

Olsen, Sonja J., primary, Winn, Amber K., additional, Budd, Alicia P., additional, Prill, Mila M., additional, Steel, John, additional, Midgley, Claire M., additional, Kniss, Krista, additional, Burns, Erin, additional, Rowe, Thomas, additional, Foust, Angela, additional, Jasso, Gabriela, additional, Merced-Morales, Angiezel, additional, Davis, C. Todd, additional, Jang, Yunho, additional, Jones, Joyce, additional, Daly, Peter, additional, Gubareva, Larisa, additional, Barnes, John, additional, Kondor, Rebecca, additional, Sessions, Wendy, additional, Smith, Catherine, additional, Wentworth, David E., additional, Garg, Shikha, additional, Havers, Fiona P., additional, Fry, Alicia M., additional, Hall, Aron J., additional, Brammer, Lynnette, additional, and Silk, Benjamin J., additional

Published
2021
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49. Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission

Author

Hill, Nichola J, primary, Smith, Lacy M, additional, Muzaffar, Sabir B, additional, Nagel, Jessica L, additional, Prosser, Diann J, additional, Sullivan, Jeffery D, additional, Spragens, Kyle A, additional, DeMattos, Carlos A, additional, DeMattos, Cecilia C, additional, El Sayed, Lu’ay, additional, Erciyas-Yavuz, Kiraz, additional, Davis, C Todd, additional, Jones, Joyce, additional, Kis, Zoltan, additional, Donis, Ruben O, additional, Newman, Scott  H, additional, and Takekawa, John Y, additional

Published
2020
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50. Detection and Characterization of Swine Origin Influenza A(H1N1) Pandemic 2009 Viruses in Humans following Zoonotic Transmission

Author

Cook, Peter W., primary, Stark, Thomas, additional, Jones, Joyce, additional, Kondor, Rebecca, additional, Zanders, Natosha, additional, Benfer, Jeffrey, additional, Scott, Samantha, additional, Jang, Yunho, additional, Janas-Martindale, Alicia, additional, Lindstrom, Stephen, additional, Blanton, Lenee, additional, Schiltz, John, additional, Tell, Rachel, additional, Griesser, Richard, additional, Shult, Peter, additional, Reisdorf, Erik, additional, Danz, Tonya, additional, Fry, Alicia, additional, Barnes, John, additional, Vincent, Amy, additional, Wentworth, David E., additional, and Davis, C. Todd, additional

Published
2020
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