187 results on '"Depken, Martin"'
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2. Systematic decomposition of sequence determinants governing CRISPR/Cas9 specificity
3. Live-cell imaging reveals the trade-off between target search flexibility and efficiency for Cas9 and Cas12a.
4. The nucleotide addition cycle of the SARS-CoV-2 polymerase
5. Fitting in the Age of Single-Molecule Experiments: A Guide to Maximum-Likelihood Estimation and Its Advantages
6. Irregular transcription dynamics for rapid production of high-fidelity transcripts
7. Cross-link governed dynamics of biopolymer networks
8. Nucleosome shape dictates chromatin-fiber structure
9. Stresses in Smooth Flows of Dense Granular Media
10. Continuum approach to wide shear zones in quasi-static granular matter
11. Exact probability function for bulk density and current in the asymmetric exclusion process
12. Fluctuation-dissipation relation and the Edwards entropy for a glassy granular compaction model
13. Exact joint density-current probability function for the asymmetric exclusion process
14. On the Gallavotti-Cohen symmetry for stochastic systems
15. Marginal scaling scenario and analytic results for a glassy compaction model
16. Mechanism of assembly of an elongation-competent SARS-CoV-2 replication transcription complex
17. Models of non-equilibrium systems
18. Fitting in the Age of Single-Molecule Experiments: A Guide to Maximum-Likelihood Estimation and Its Advantages
19. Visualization and quantification of nascent RAD51 filament formation at single-monomer resolution
20. Quantitative parameters of bacterial RNA polymerase open-complex formation, stabilization and disruption on a consensus promoter
21. High-throughput single-molecule experiments reveal heterogeneity, state switching, and three interconnected pause states in transcription
22. Active multistage coarsening of actin networks driven by myosin motors
23. Quantitative parameters of bacterial RNA polymerase open-complex formation, stabilization and disruption on a consensus promoter
24. Inhibition of SARS-CoV-2 polymerase by nucleotide analogs from a single-molecule perspective
25. Author response: Inhibition of SARS-CoV-2 polymerase by nucleotide analogs from a single-molecule perspective
26. Systematic decomposition of sequence determinants governing CRISPR/Cas9 specificity
27. The nucleotide addition cycle of the SARS-CoV-2 polymerase
28. Anisotropies in cortical tension reveal the physical basis of polarizing cortical flows
29. High-Throughput Single-Molecule Experiments Reveal Heterogeneity, State-Switching, and Three Interconnected Pause States in Bacterial Transcription
30. A unifying mechanistic model of bacterial transcription with three interconnected pause states and non-diffusive backtrack recovery
31. Inhibition of SARS-CoV-2 polymerase by nucleotide analogs: a single molecule perspective
32. Skipping and sliding to optimize target search on protein-bound DNA and RNA
33. A kinetic model improves off-target predictions and reveals the physical basis of SpCas9 fidelity
34. Temperature controlled high-throughput magnetic tweezers show striking difference in activation energies of replicating viral RNA-dependent RNA polymerases
35. A Unifying Mechanistic Model of Bacterial Transcription with Three Interconnected Pause States and Non-Diffusive Backtrack Recovery
36. Argonaute bypasses cellular obstacles without hindrance during target search
37. Accounting for RNA polymerase heterogeneity reveals state switching and two distinct long-lived backtrack states escaping through cleavage
38. Pausing controls branching between productive and non-productive pathways during initial transcription in bacteria
39. Hybridization Kinetics Explains CRISPR-Cas Off-Targeting Rules
40. What is all this fuss about Tus? Comparison of recent findings from biophysical and biochemical experiments
41. Pausing controls branching between productive and non-productive pathways during initial transcription
42. Signatures of Nucleotide Analog Incorporation by an RNA-Dependent RNA Polymerase Revealed Using High-Throughput Magnetic Tweezers
43. Crowding-induced transcriptional bursts dictate polymerase and nucleosome density profiles along genes
44. The kinetic basis of CRISPR-Cas off-targeting rules
45. Why Argonaute is needed to make microRNA target search fast and reliable
46. Ensemble Microscopy Reveals Nanoscale Patterns of Molecular Motors on Microtubules
47. To Cleave or not to Cleave: Predicting the Target Specificity of CRISPR-Cas Systems through Theoretical Modeling
48. Switching between Exonucleolysis and Replication by T7 DNA Polymerase Ensures High Fidelity
49. Real-time observation of replicative helicase assembly onto single-stranded DNA
50. Cas3-Derived Target DNA Degradation Fragments Fuel Primed CRISPR Adaptation
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