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1. Fungal Planet description sheets: 1436–1477

Author

Tan, Y.P., Bishop-Hurley, S.L., Shivas, R.G., Cowan, D.A., Maggs-Kölling, G., Maharachchikumbura, S.S.N., Pinruan, U., Bransgrove, K.L., De la Peña-Lastra, S., Larsson, E., Lebel, T., Mahadevakumar, S., Mateos, A., Osieck, E.R., Rigueiro-Rodríguez, A., Sommai, S., Ajithkumar, K., Akulov, A., Anderson, F.E., Arenas, F., Balashov, S., Bañares, Á, Berger, D.K., Bianchinotti, M.V., Bien, S., Bilański, P., Boxshall, A.-G., Bradshaw, M., Broadbridge, J., Calaça, F.J.S., Campos-Quiroz, C., Carrasco-Fernández, J., Castro, J.F., Chaimongkol, S., Chandranayaka, S., Chen, Y., Comben, D., Dearnaley, J.D.W., Ferreira-Sá, A.S., Dhileepan, K., Díaz, M.L., Divakar, P.K., Xavier-Santos, S., Fernández-Bravo, A., Gené, J., Guard, F.E., Guerra, M., Gunaseelan, S., Houbraken, J., Janik-Superson, K., Jankowiak, R., Jeppson, M., Jurjević, Ž, Kaliyaperumal, M., Kelly, L.A., Kezo, K., Khalid, A.N., Khamsuntorn, P., Kidanemariam, D., Kiran, M., Lacey, E., Langer, G.J., López-Llorca, L.V., Luangsa-ard, J.J. (Janet), Lueangjaroenkit, P., Lumbsch, H.T., Maciá-Vicente, J.G., Mamatha Bhanu, L.S., Marney, T.S., Marqués-Gálvez, J.E., Morte, A., Naseer, Navarro-Ródenas, Oyedele, Peters, Piskorski, Quijada, Ramírez, Raja, Razzaq, Rico, Rodríguez, Ruszkiewicz-Michalska, Sánchez, Santelices, Savitha, Serrano, Leonardo-Silva, Solheim, Somrithipol, Sreenivasa, Ste¸pniewska, Strapagiel, Taylor, Torres-Garcia, Vauras, Villarreal, Visagie, Wołkowycki, Yingkunchao, Zapora, Groenewald, P.W, Tan, Y.P., Bishop-Hurley, S.L., Shivas, R.G., Cowan, D.A., Maggs-Kölling, G., Maharachchikumbura, S.S.N., Pinruan, U., Bransgrove, K.L., De la Peña-Lastra, S., Larsson, E., Lebel, T., Mahadevakumar, S., Mateos, A., Osieck, E.R., Rigueiro-Rodríguez, A., Sommai, S., Ajithkumar, K., Akulov, A., Anderson, F.E., Arenas, F., Balashov, S., Bañares, Á, Berger, D.K., Bianchinotti, M.V., Bien, S., Bilański, P., Boxshall, A.-G., Bradshaw, M., Broadbridge, J., Calaça, F.J.S., Campos-Quiroz, C., Carrasco-Fernández, J., Castro, J.F., Chaimongkol, S., Chandranayaka, S., Chen, Y., Comben, D., Dearnaley, J.D.W., Ferreira-Sá, A.S., Dhileepan, K., Díaz, M.L., Divakar, P.K., Xavier-Santos, S., Fernández-Bravo, A., Gené, J., Guard, F.E., Guerra, M., Gunaseelan, S., Houbraken, J., Janik-Superson, K., Jankowiak, R., Jeppson, M., Jurjević, Ž, Kaliyaperumal, M., Kelly, L.A., Kezo, K., Khalid, A.N., Khamsuntorn, P., Kidanemariam, D., Kiran, M., Lacey, E., Langer, G.J., López-Llorca, L.V., Luangsa-ard, J.J. (Janet), Lueangjaroenkit, P., Lumbsch, H.T., Maciá-Vicente, J.G., Mamatha Bhanu, L.S., Marney, T.S., Marqués-Gálvez, J.E., Morte, A., Naseer, Navarro-Ródenas, Oyedele, Peters, Piskorski, Quijada, Ramírez, Raja, Razzaq, Rico, Rodríguez, Ruszkiewicz-Michalska, Sánchez, Santelices, Savitha, Serrano, Leonardo-Silva, Solheim, Somrithipol, Sreenivasa, Ste¸pniewska, Strapagiel, Taylor, Torres-Garcia, Vauras, Villarreal, Visagie, Wołkowycki, Yingkunchao, Zapora, Groenewald, and P.W

Abstract

Novel species of fungi described in this study include those from various countries as follows: Argentina, Colletotrichum araujiae on leaves, stems and fruits of Araujia hortorum. Australia, Agaricus pateritonsus on soil, Curvularia fraserae on dying leaf of Bothriochloa insculpta, Curvularia millisiae from yellowing leaf tips of Cyperus aromaticus, Marasmius brunneolorobustus on well-rotted wood, Nigrospora cooperae from necrotic leaf of Heteropogon contortus, Penicillium tealii from the body of a dead spider, Pseudocercospora robertsiorum from leaf spots of Senna tora, Talaromyces atkinsoniae from gills of Marasmius crinis-equi and Zasmidium pearceae from leaf spots of Smilax glyciphylla. Brazil, Preussia bezerrensis from air. Chile, Paraconiothyrium kelleni from the rhizosphere of Fragaria chiloensis subsp. chiloensis f. chiloensis. Finland, Inocybe udicola on soil in mixed forest with Betula pendula, Populus tremula, Picea abies and Alnus incana. France, Myrmecridium normannianum on dead culm of unidentified Poaceae. Germany, Vexillomyces fraxinicola from symptomless stem wood of Fraxinus excelsior. India, Diaporthe limoniae on infected fruit of Limonia acidissima, Didymella naikii on leaves of Cajanus cajan, and Fulvifomes mangroviensis on basal trunk of Aegiceras corniculatum. Indonesia, Penicillium ezekielii from Zea mays kernels. Namibia, Neocamarosporium calicoremae and Neocladosporium calicoremae on stems of Calicorema capitata, and Pleiochaeta adenolobi on symptomatic leaves of Adenolobus pechuelii. Netherlands, Chalara pteridii on stems of Pteridium aquilinum, Neomackenziella juncicola (incl. Neomackenziella gen. nov.) and Sporidesmiella junci from dead culms of Juncus effusus. Pakistan, Inocybe longistipitata on soil in a Quercus forest. Poland, Phytophthora viadrina from rhizosphere soil of Quercus robur, and Septoria krystynae on leaf spots of Viscum album. Portugal (Azores), Acrogenospora stellata on dead wood or bark. South Africa, Phyllactinia grey

Published
2022
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2. Fungal Planet description sheets: 1436–1477

Author

Universidad de Alicante. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante. Instituto Multidisciplinar para el Estudio del Medio "Ramón Margalef", Tan, Y.P., Bishop-Hurley, S.L., Shivas, R.G., Cowan, Don A., Maggs-Kölling, Gillian, Maharachchikumbura, S.S.N., Pinruan, U., Bransgrove, K.L., De la Peña-Lastra, S., Larsson, E., Lebel, T., Zapora, E., Groenewald, J.Z., Crous, P.W., Mahadevakumar, S., Mateos, A., Osieck, E.R., Rigueiro-Rodríguez, A., Sommai, S., Ajithkumar, K., Akulov, A., Anderson, F.E., Arenas, F., Balashov, S., Bañares Baudet, Ángel, Berger, D.K., Bianchinotti, M.V., Bien, S., Bilański, P., Boxshall, A.-G., Bradshaw, M., Broadbridge, J., Calaça, F.J.S., Campos-Quiroz, C., Carrasco-Fernández, J., Castro, J.F., Chaimongkol, S., Chandranayaka, S., Chen, Y., Comben, D., Dearnaley, J.D.W., Ferreira-Sá, A.S., Dhileepan, K., Díaz, M.L., Divakar, P.K., Xavier-Santos, S., Fernández-Bravo, A., Gené, J., Guard, F.E., Guerra, M., Gunaseelan, S., Houbraken, J., Janik-Superson, K., Jankowiak, R., Jeppson, M., Jurjević, Ž., Kaliyaperumal, M., Kelly, L.A., Kezo, K., Khalid, Abdul Nasir, Khamsuntorn, P., Kidanemariam, D., Kiran, M., Lacey, E., Langer, G.J., Lopez-Llorca, Luis Vicente, Luangsa-ard, J.J., Lueangjaroenkit, P., Lumbsch, H.T., Maciá-Vicente, Jose G., Mamatha Bhanu, L.S., Marney, T.S., Marqués-Gálvez, J.E., Morte, A., Naseer, A., Navarro-Ródenas, A., Oyedele, O., Peters, S., Piskorski, S., Quijada, L., Ramírez, G.H., Raja, K., Razzaq, A., Rico, V.J., Rodríguez, A., Ruszkiewicz-Michalska, M., Sánchez, R.M., Santelices, C., Savitha, A.S., Serrano, M., Leonardo-Silva, L., Solheim, H., Somrithipol, S., Sreenivasa, M.Y., Stępniewska, H., Strapagiel, D., Taylor, T., Torres-Garcia, D., Vauras, J., Villarreal, M., Visagie, C.M., Wołkowycki, M., Yingkunchao, W., Universidad de Alicante. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante. Instituto Multidisciplinar para el Estudio del Medio "Ramón Margalef", Tan, Y.P., Bishop-Hurley, S.L., Shivas, R.G., Cowan, Don A., Maggs-Kölling, Gillian, Maharachchikumbura, S.S.N., Pinruan, U., Bransgrove, K.L., De la Peña-Lastra, S., Larsson, E., Lebel, T., Zapora, E., Groenewald, J.Z., Crous, P.W., Mahadevakumar, S., Mateos, A., Osieck, E.R., Rigueiro-Rodríguez, A., Sommai, S., Ajithkumar, K., Akulov, A., Anderson, F.E., Arenas, F., Balashov, S., Bañares Baudet, Ángel, Berger, D.K., Bianchinotti, M.V., Bien, S., Bilański, P., Boxshall, A.-G., Bradshaw, M., Broadbridge, J., Calaça, F.J.S., Campos-Quiroz, C., Carrasco-Fernández, J., Castro, J.F., Chaimongkol, S., Chandranayaka, S., Chen, Y., Comben, D., Dearnaley, J.D.W., Ferreira-Sá, A.S., Dhileepan, K., Díaz, M.L., Divakar, P.K., Xavier-Santos, S., Fernández-Bravo, A., Gené, J., Guard, F.E., Guerra, M., Gunaseelan, S., Houbraken, J., Janik-Superson, K., Jankowiak, R., Jeppson, M., Jurjević, Ž., Kaliyaperumal, M., Kelly, L.A., Kezo, K., Khalid, Abdul Nasir, Khamsuntorn, P., Kidanemariam, D., Kiran, M., Lacey, E., Langer, G.J., Lopez-Llorca, Luis Vicente, Luangsa-ard, J.J., Lueangjaroenkit, P., Lumbsch, H.T., Maciá-Vicente, Jose G., Mamatha Bhanu, L.S., Marney, T.S., Marqués-Gálvez, J.E., Morte, A., Naseer, A., Navarro-Ródenas, A., Oyedele, O., Peters, S., Piskorski, S., Quijada, L., Ramírez, G.H., Raja, K., Razzaq, A., Rico, V.J., Rodríguez, A., Ruszkiewicz-Michalska, M., Sánchez, R.M., Santelices, C., Savitha, A.S., Serrano, M., Leonardo-Silva, L., Solheim, H., Somrithipol, S., Sreenivasa, M.Y., Stępniewska, H., Strapagiel, D., Taylor, T., Torres-Garcia, D., Vauras, J., Villarreal, M., Visagie, C.M., Wołkowycki, M., and Yingkunchao, W.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Argentina, Colletotrichum araujiae on leaves, stems and fruits of Araujia hortorum. Australia, Agaricus pateritonsus on soil, Curvularia fraserae on dying leaf of Bothriochloa insculpta, Curvularia millisiae from yellowing leaf tips of Cyperus aromaticus, Marasmius brunneolorobustus on well-rotted wood, Nigrospora cooperae from necrotic leaf of Heteropogon contortus, Penicillium tealii from the body of a dead spider, Pseudocercospora robertsiorum from leaf spots of Senna tora, Talaromyces atkinsoniae from gills of Marasmius crinis-equi and Zasmidium pearceae from leaf spots of Smilax glyciphylla. Brazil, Preussia bezerrensis from air. Chile, Paraconiothyrium kelleni from the rhizosphere of Fragaria chiloensis subsp. chiloensis f. chiloensis. Finland, Inocybe udicola on soil in mixed forest with Betula pendula, Populus tremula, Picea abies and Alnus incana. France, Myrmecridium normannianum on dead culm of unidentified Poaceae. Germany, Vexillomyces fraxinicola from symptomless stem wood of Fraxinus excelsior. India, Diaporthe limoniae on infected fruit of Limonia acidissima, Didymella naikii on leaves of Cajanus cajan, and Fulvifomes mangroviensis on basal trunk of Aegiceras corniculatum. Indonesia, Penicillium ezekielii from Zea mays kernels. Namibia, Neocamarosporium calicoremae and Neocladosporium calicoremae on stems of Calicorema capitata, and Pleiochaeta adenolobi on symptomatic leaves of Adenolobus pechuelii. Netherlands, Chalara pteridii on stems of Pteridium aquilinum, Neomackenziella juncicola (incl. Neomackenziella gen. nov.) and Sporidesmiella junci from dead culms of Juncus effusus. Pakistan, Inocybe longistipitata on soil in a Quercus forest. Poland, Phytophthora viadrina from rhizosphere soil of Quercus robur, and Septoria krystynae on leaf spots of Viscum album. Portugal (Azores), Acrogenospora stellata on dead wood or bark. South Africa, Phyllactinia grey

Published
2022

5. Evaluating methodologies for species delimitation: the mismatch between phenotypes and genotypes in lichenized fungi (Bryoria sect. Implexae, Parmeliaceae)

Author

Boluda, C.G., Rico, V.J., Divakar, P.K., Nadyeina, O., Myllys, L., McMullin, R.T., Zamora, J.C., Scheidegger, C., Hawksworth, D.L., Boluda, C.G., Rico, V.J., Divakar, P.K., Nadyeina, O., Myllys, L., McMullin, R.T., Zamora, J.C., Scheidegger, C., and Hawksworth, D.L.

Abstract

In many lichen-forming fungi, molecular phylogenetic analyses lead to the discovery of cryptic species within traditional morphospecies. However, in some cases, molecular sequence data also questions the separation of phenotypically characterised species. Here we apply an integrative taxonomy approach ‒ including morphological, chemical, molecular, and distributional characters ‒ to re-assess species boundaries in a traditionally speciose group of hair lichens, Bryoria sect. Implexae. We sampled multilocus sequence and microsatellite data from 142 specimens from a broad intercontinental distribution. Molecular data included DNA sequences of the standard fungal markers ITS, IGS, GAPDH, two newly tested loci (FRBi15 and FRBi16), and SSR frequencies from 18 microsatellite markers. Datasets were analysed with Bayesian and maximum likelihood phylogenetic reconstruction, phenogram reconstruction, STRUCTURE Bayesian clustering, principal coordinate analysis, haplotype network, and several different species delimitation analyses (ABGD, PTP, GMYC, and DISSECT). Additionally, past population demography and divergence times are estimated. The different approaches to species recognition do not support the monophyly of the 11 currently accepted morphospecies, and rather suggest the reduction of these to four phylogenetic species. Moreover, three of these are relatively recent in origin and cryptic, including phenotypically and chemically variable specimens. Issues regarding the integration of an evolutionary perspective into taxonomic conclusions in species complexes, which have undergone recent diversification, are discussed. The four accepted species, all epitypified by sequenced material, are Bryoria fuscescens, B. glabra, B. kockiana, and B. pseudofuscescens. Ten species rank names are reduced to synonymy. In the absence of molecular data, they can be recorded as the B. fuscescens complex. Intraspecific phenotype plasticity and factors affecting the speciation of different m

Published
2019
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7. New primers for promising single-copy genes in fungal phylogenetics and systematics

Author

Schmitt, I., Crespo, A., Divakar, P.K., Fankhauser, J.D., Herman-Sackett, E., Kalb, K., Nelsen, M.P., Nelson, N.A., Rivas-Plata, E., Shimp, A.D., Widhelm, T., Lumbsch, H.T., Schmitt, I., Crespo, A., Divakar, P.K., Fankhauser, J.D., Herman-Sackett, E., Kalb, K., Nelsen, M.P., Nelson, N.A., Rivas-Plata, E., Shimp, A.D., Widhelm, T., and Lumbsch, H.T.

Abstract

Developing powerful phylogenetic markers is a key concern in fungal phylogenetics. Here we report degenerate primers that amplify the single-copy genes Mcm7 (MS456) and Tsr1 (MS277) across a wide range of Pezizomycotina (Ascomycota). Phylogenetic analyses of 59 taxa belonging to the Eurotiomycetes, Lecanoromycetes, Leotiomycetes, Lichinomycetes and Sordariomycetes, indicate the utility of these loci for fungal phylogenetics at taxonomic levels ranging from genus to class. We also tested the new primers in silico using sequences of Saccharomycotina, Taphrinomycotina and Basidiomycota to predict their potential of amplifying widely across the Fungi. The analyses suggest that the new primers will need no, or only minor sequence modifications to amplify Saccharomycotina, Taphrinomycotina and Basidiomycota.

Published
2009

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