402 results on '"Emeršič A"'
Search Results
2. Educational Computer Vision Materials for Classification and Tracking of Objects
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Emeršič, Žiga, Hrastnik, Gregor, Peer, Nataša Meh, Kirn, Vasja Lev, Justin, Aljaž, Videnović, Jovana, Markićević, Luka, Peer, Peter, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Julian, Vicente, editor, Camacho, David, editor, Yin, Hujun, editor, Alberola, Juan M., editor, Nogueira, Vitor Beires, editor, Novais, Paulo, editor, and Tallón-Ballesteros, Antonio, editor
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- 2025
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3. Plasma p-tau212 antemortem diagnostic performance and prediction of autopsy verification of Alzheimer’s disease neuropathology
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Kac, Przemysław R., González-Ortiz, Fernando, Emeršič, Andreja, Dulewicz, Maciej, Koutarapu, Srinivas, Turton, Michael, An, Yang, Smirnov, Denis, Kulczyńska-Przybik, Agnieszka, Varma, Vijay R., Ashton, Nicholas J., Montoliu-Gaya, Laia, Camporesi, Elena, Winkel, Izabela, Paradowski, Bogusław, Moghekar, Abhay, Troncoso, Juan C., Lashley, Tammaryn, Brinkmalm, Gunnar, Resnick, Susan M., Mroczko, Barbara, Kvartsberg, Hlin, Gregorič Kramberger, Milica, Hanrieder, Jörg, Čučnik, Saša, Harrison, Peter, Zetterberg, Henrik, Lewczuk, Piotr, Thambisetty, Madhav, Rot, Uroš, Galasko, Douglas, Blennow, Kaj, and Karikari, Thomas K.
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- 2024
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4. Long-term follow-up of 109 children with juvenile idiopathic oligoarthritis after first intra-articular corticosteroid injection
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Zajc Avramovič, Mojca, Toplak, Nataša, Markelj, Gašper, Emeršič, Nina, and Avčin, Tadej
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- 2024
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5. Acousto-microfluidic Control of Liquid Crystals
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Vasquez-Montoya, Gustavo A., Emersic, Tadej, Atzin, Noe, Tavera-Vazquez, Antonio, Mozaffari, Ali, Zhang, Rui, Guzman, Orlando, Snezhko, Alexey, Nealey, Paul F., and de Pablo, Juan J.
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Condensed Matter - Soft Condensed Matter - Abstract
The optical properties of liquid crystals serve as the basis for display, diagnostic, and sensing technologies. Such properties are generally controlled by relying on electric fields. In this work, we investigate the effects of microfluidic flows and acoustic fields on the molecular orientation and the corresponding optical response of nematic liquid crystals. Several previously unknown structures are identified, which are rationalized in terms of a state diagram as a function of the strengths of the flow and the acoustic field. The new structures are interpreted by relying on calculations with a free energy functional expressed in terms of the tensorial order parameter, using continuum theory simulations in the Landau-de Gennes framework. Taken together, the findings presented here offer promise for the development of new systems based on combinations of sound, flow, and confinement.
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- 2023
6. Integrating AI into VET: Insights from AIM@VET’s First Training Activity
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Emeršič, Žiga, primary, Peer, Peter, additional, Hrastnik, Gregor, additional, Meh Peer, Nataša, additional, María Bey, José, additional, Meizoso-García, María, additional, Pedro Silva, António, additional, Domingues, Cláudia, additional, Abreu, Carla, additional, Costa, António, additional, Durães, Dalila, additional, Novais, Paulo, additional, Renda, Cristina, additional, and Prieto, Abraham, additional
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- 2024
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7. Genetic variability of incretin receptors affects the occurrence of neurodegenerative diseases and their characteristics
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David Vogrinc, Sara Redenšek Trampuž, Tanja Blagus, Maja Trošt, Milica Gregorič Kramberger, Andreja Emeršič, Saša Čučnik, Katja Goričar, and Vita Dolžan
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Glucagon-like peptide 1 receptor ,Glucose-dependent insulinotropic polypeptide ,Alzheimer's disease ,Parkinson's disease ,Polymorphism ,Biomarker ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Background: Alzheimer's disease (AD) and Parkinson's disease (PD) are the most common neurodegenerative diseases. Their treatment options are rather limited, and no neuroprotective or disease-modifying treatments are available. Anti-diabetic drugs, such as glucagon-like peptide 1 (GLP-1) and glucose-dependent insulinotropic polypeptide (GIP) agonists, have been suggested as a potential therapeutic option. Aims: Assess GLP1R and GIPR genetic variability in relation to AD- and PD-related phenotypes. Methods: AD, PD patients and healthy control subjects were included in the study. Cerebrospinal fluid (CSF) biomarkers of Alzheimer's disease were measured in AD patients, while cognitive impairment was evaluated in PD. All participants were genotyped for three SNPs: GLP1R rs10305420, GLP1R rs6923761 and GIPR rs1800437. Results: GLP1R rs10305420 genotypes were associated with increased odds for AD and PD development. GLP1R rs10305420 and GLP1R rs6923761 genotypes were significantly associated with Aβ42/40 ratio (p = 0.041 and p = 0.050), while GLP1R rs6923761 was also associated with p-tau levels (p = 0.022). Finally, GIPR rs1800437 heterozygotes as well as carriers of at least one GIPR rs1800437 C allele presented with increased odds for the development of dementia in PD (OR = 1.92; 95 % CI = 1.05–3.51; p = 0.034 and OR = 1.95; 95 % CI = 1.08–3.52; p = 0.027, respectively). Conclusion: GLP1R and GIPR genetic variability may affect the occurrence of AD and PD and is also associated with AD CSF biomarkers for Alzheimer's disease and dementia in PD. The data on GLP1R and GIPR genetic variability may support the function of incretin receptors in neurodegeneration.
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- 2024
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8. Systemic auto-inflammatory manifestations in patients with spondyloarthritis
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Gaggiano, Carla, Avramovič, Mojca Zajc, Vitale, Antonio, Emeršič, Nina, Sota, Jurgen, Toplak, Nataša, Gentileschi, Stefano, Caggiano, Valeria, Tarsia, Maria, Markelj, Gašper, Vesel Tajnšek, Tina, Fabiani, Claudia, Koren Jeverica, Anja, Frediani, Bruno, Mazzei, Maria Antonietta, Cantarini, Luca, and Avčin, Tadej
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- 2024
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9. Genetic variability of incretin receptors affects the occurrence of neurodegenerative diseases and their characteristics
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Vogrinc, David, Redenšek Trampuž, Sara, Blagus, Tanja, Trošt, Maja, Gregorič Kramberger, Milica, Emeršič, Andreja, Čučnik, Saša, Goričar, Katja, and Dolžan, Vita
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- 2024
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10. Plasma p-tau212 antemortem diagnostic performance and prediction of autopsy verification of Alzheimer’s disease neuropathology
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Przemysław R. Kac, Fernando González-Ortiz, Andreja Emeršič, Maciej Dulewicz, Srinivas Koutarapu, Michael Turton, Yang An, Denis Smirnov, Agnieszka Kulczyńska-Przybik, Vijay R. Varma, Nicholas J. Ashton, Laia Montoliu-Gaya, Elena Camporesi, Izabela Winkel, Bogusław Paradowski, Abhay Moghekar, Juan C. Troncoso, Tammaryn Lashley, Gunnar Brinkmalm, Susan M. Resnick, Barbara Mroczko, Hlin Kvartsberg, Milica Gregorič Kramberger, Jörg Hanrieder, Saša Čučnik, Peter Harrison, Henrik Zetterberg, Piotr Lewczuk, Madhav Thambisetty, Uroš Rot, Douglas Galasko, Kaj Blennow, and Thomas K. Karikari
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Science - Abstract
Abstract Blood phosphorylated tau (p-tau) biomarkers, including p-tau217, show high associations with Alzheimer’s disease (AD) neuropathologic change and clinical stage. Certain plasma p-tau217 assays recognize tau forms phosphorylated additionally at threonine-212, but the contribution of p-tau212 alone to AD is unknown. We developed a blood-based immunoassay that is specific to p-tau212 without cross-reactivity to p-tau217. Here, we examined the diagnostic utility of plasma p-tau212. In five cohorts (n = 388 participants), plasma p-tau212 showed high performances for AD diagnosis and for the detection of both amyloid and tau pathology, including at autopsy as well as in memory clinic populations. The diagnostic accuracy and fold changes of plasma p-tau212 were similar to those for p-tau217 but higher than p-tau181 and p-tau231. Immunofluorescent staining of brain tissue slices showed prominent p-tau212 reactivity in neurofibrillary tangles that co-localized with p-tau217 and p-tau202/205. These findings support plasma p-tau212 as a peripherally accessible biomarker of AD pathophysiology.
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- 2024
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11. Long-term follow-up of 109 children with juvenile idiopathic oligoarthritis after first intra-articular corticosteroid injection
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Mojca Zajc Avramovič, Nataša Toplak, Gašper Markelj, Nina Emeršič, and Tadej Avčin
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Juvenile idiopathic arthitis ,Oligoarthritis ,Pediatric arthritis ,Outcome ,Long-term follow-up ,ANA ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background To evaluate long-term outcomes and prognostic factors in patients with juvenile idiopathic arthritis (JIA), presenting as oligoarthritis, who received IAC as the first treatment for their disease. Methods We conducted retrospective study at the University Children’s Hospital Ljubljana, Slovenia, from January 2015 to May 2023 in children with JIA, clinically presenting as oligoarthritis receiving intra-articular corticosteroid injection (IAC) as the initial treatment. Patient and treatment data were collected, and the outcomes were categorized into three groups based on the later need for therapy: no therapy needed, only additional IAC needed and systemic therapy needed. The last group was further divided based on the requirement of bDMARD. Log-rank (Mantel-Cox) survival analyses compared different outcome groups. Results We included 109 patients with JIA, presenting as oligoarthritis (63% female), who were first treated with IAC. The mean age at IAC was 8.0 years, with a 4.3-year follow-up. Notably, 38.5% of patients did not require additional therapy post-IAC, whereas 15.5% required only additional IAC. Systemic therapy, mainly methotrexate (MTX), was necessary for 45.9% of patients, initiated in average 7.8 months post-IAC. Biologic therapy was initiated in 22% in average 2.2 years post-IAC. Number of injected joints correlated with the need for biologics. At the last follow-up, 88.9% had inactive disease. ANA positivity (P = 0.049, chi square 3.89) and HLA B27 antigen presence (P = 0.050, chi square 3.85) were associated with the need for systemic therapy. A subgroup of children older than 8 years, ANA and HLA B27 negative required significantly less systemic (25.8%) and biologic therapy (9.6%) compared to other patients (p = 0.050, chi square 3.77). Conclusion Almost 40% of children with oligoarticular JIA requiring IAC did not progress to chronic disease. Younger age, ANA positivity, and HLA B27 presence were predictive factors for systemic therapy, while the number of injected joints predicted the future need for biologic therapy.
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- 2024
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12. The HyperPed-COVID international registry: Impact of age of onset, disease presentation and geographical distribution on the final outcome of MIS-C
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Caorsi, Roberta, Consolaro, Alessandro, Speziani, Camilla, Sozeri, Betul, Ulu, Kadir, Faugier-Fuentes, Enrique, Menchaca-Aguayo, Hector, Ozen, Seza, Sener, Seher, Akhter Rahman, Shahana, Imnul Islam, Mohammad, Haerynck, Filomeen, Simonini, Gabriele, Mastri, Mariel Viviana, Avcin, Tadej, Sršen, Saša, de Albuquerque Pedrosa Fernandes, Taciana, Stanevicha, Valda, Vojinovic, Jelena, Sobh, Ali, Fingerhutova, Sarka, Minxova, Lenka, Gagro, Alenka, Rodrigues Fonseca, Adriana, Pandya, Devang, Varbanova, Boriana, Sánchez-Manubens, Judith, Ganeva, Margarita, Montin, Davide, Boyarchuk, Oksana, Minghini, Andrea, Bracaglia, Claudia, Brogan, Paul, Candotti, Fabio, Cattalini, Marco, Meyts, Isabelle, Minoia, Francesca, Taddio, Andrea, Wouters, Carine, De Benedetti, Fabrizio, Bovis, Francesca, Ravelli, Angelo, Ruperto, Nicolino, Gattorno, Marco, Bilginer, Yelda, Laila, Kamrul, Islam, Mohammed Mahbubul, Meertens, Bram, Hoste, Levi, Dehoorne, Joke, Schelstraete, Petra, Vandekerckhove, Kristof, Willems, Jef, Matthijs, Inge, Filocamo e Gisella Beatrice Beretta, Giovanni, Magalhaes, Claudia Saad, Chubata, Oksana, Ricci, Francesca, Vukovic, Antonija, Temelkova, Katya, Avramovic, Mojca Zajc, Emersic, Nina, Bizjak, Masa, Vesel, Tina, Rodrigues, Marta Felix, Gasparello de Almeida, Rozana, Lukjanovica, Kristine, Elnagdy, Marwa H., Soliman, Ahmed, Terifajova, Eva, Brejchova, Ivana, Magner, Martin, Myrup, Charlotte, Vougiouka, Olga, Jelusic, Marija, La Torre, Francesco, Rigante, Donato, Maggio, Maria Cristina, Verdoni, Lucio, Rubio-Perez, Nadina, Cornejo, Gabriel Vega, Villarreal Trevino, Ana Victoria, Brito, Iva, Oliveira-Ramos, Filipa, Alexeeva, Ekaterina, Chasnyk, Vyacheslav, Arkachaisri, Thaschawee, Boyko, Yaryna, Vyzhga, Yulia, and Samsonenko, Svitlana
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- 2024
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13. Contemporary Cerebrospinal Fluid Analysis in Multiple Sclerosis
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Rot, Uroš, Emeršič, Andreja, Demarin, Vida, editor, Battistin, Leontino, editor, and Budinčević, Hrvoje, editor
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- 2023
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14. Sculpting stable structures in pure liquids
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Emeršič, Tadej, Zhang, Rui, Kos, Žiga, Čopar, Simon, Osterman, Natan, de Pablo, Juan J., and Tkalec, Uroš
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Condensed Matter - Soft Condensed Matter - Abstract
Pure liquids in thermodynamic equilibrium are structurally homogeneous. In liquid crystals, flow and light pulses are used to create reconfigurable domains with polar order. Moreover, through careful engineering of concerted microfluidic flows and localized opto-thermal fields, it is possible to achieve complete control over the nucleation, growth, and shape of such domains. Experiments, theory, and simulations indicate that the resulting structures can be stabilized indefinitely, provided the liquids are maintained in a controlled non-equilibrium state. The resulting sculpted liquids could find applications in microfluidic devices for selective encapsulation of solutes and particles into optically active compartments that interact with external stimuli.
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- 2020
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15. Microfluidic control over topological states in channel-confined nematic flows
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Čopar, Simon, Kos, Žiga, Emeršič, Tadej, and Tkalec, Uroš
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Condensed Matter - Soft Condensed Matter - Abstract
Compared to isotropic liquids, orientational order of nematic liquid crystals makes their rheological properties more involved, and thus requires fine control of the flow parameters to govern the orientational patterns. In microfluidic channels with perpendicular surface alignment, nematics discontinuously transition from perpendicular structure at low flow rates to flow-aligned structure at high flow rates. Here we show how precise tuning of the driving pressure can be used to stabilize and manipulate a previously unresearched topologically protected chiral intermediate state which arises before the homeotropic to flow-aligned transition. We characterize the mechanisms underlying the transition and construct a phenomenological model to describe the critical behaviour and the phase diagram of the observed chiral flow state, and evaluate the effect of a forced symmetry breaking by introduction of a chiral dopant. Finally, we induce transitions on demand through channel geometry, application of laser tweezers, and careful control of the flow rate.
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- 2020
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16. Diagnostic value of kappa free light chain index in patients with primary progressive multiple sclerosis – a multicentre study
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Harald Hegen, Klaus Berek, Paola Cavalla, Mikael Christiansen, Andreja Emeršič, Massimiliano Di Filippo, Lorenzo Gaetani, Michaela Hassler, Cyra Leurs, Dejan Milosavljevic, Vincent van Pesch, Thor Petersen, Stefan Presslauer, Igal Rosenstein, Uroš Rot, Christine Schnabl, Charlotte Teunissen, Domizia Vecchio, Marco Vercellino, and Florian Deisenhammer
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cerebrospinal fluid ,kappa free light chain ,primary progressive ,multiple sclerosis ,diagnosis ,sensitivity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundKappa free light chains (κ-FLC) in the cerebrospinal fluid (CSF) are an emerging biomarker in multiple sclerosis (MS).ObjectiveTo investigate whether κ-FLC index has similar diagnostic value in patients with primary progressive multiple sclerosis (PPMS) compared to oligoclonal bands (OCB).MethodsPatients with PPMS were recruited through 11 MS centres across 7 countries. κ-FLC were measured by immunonephelometry/-turbidimetry. OCB were determined by isoelectric focusing and immunofixation.ResultsA total of 174 patients (mean age of 52±11 years, 51% males) were included. κ-FLC index using a cut-off of 6.1 was positive in 161 (93%) and OCB in 153 (88%) patients.Conclusionκ-FLC index shows similar diagnostic sensitivity than OCB in PPMS.
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- 2023
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17. The Unconstrained Ear Recognition Challenge 2019 - ArXiv Version With Appendix
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Emeršič, Žiga, V., Aruna Kumar S., Harish, B. S., Gutfeter, Weronika, Khiarak, Jalil Nourmohammadi, Pacut, Andrzej, Hansley, Earnest, Segundo, Mauricio Pamplona, Sarkar, Sudeep, Park, Hyeonjung, Nam, Gi Pyo, Kim, Ig-Jae, Sangodkar, Sagar G., Kaçar, Ümit, Kirci, Murvet, Yuan, Li, Yuan, Jishou, Zhao, Haonan, Lu, Fei, Mao, Junying, Zhang, Xiaoshuang, Yaman, Dogucan, Eyiokur, Fevziye Irem, Özler, Kadir Bulut, Ekenel, Hazım Kemal, Chowdhury, Debbrota Paul, Bakshi, Sambit, Sa, Pankaj K., Majhi, Banshidhar, Peer, Peter, and Štruc, Vitomir
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Computer Science - Computer Vision and Pattern Recognition - Abstract
This paper presents a summary of the 2019 Unconstrained Ear Recognition Challenge (UERC), the second in a series of group benchmarking efforts centered around the problem of person recognition from ear images captured in uncontrolled settings. The goal of the challenge is to assess the performance of existing ear recognition techniques on a challenging large-scale ear dataset and to analyze performance of the technology from various viewpoints, such as generalization abilities to unseen data characteristics, sensitivity to rotations, occlusions and image resolution and performance bias on sub-groups of subjects, selected based on demographic criteria, i.e. gender and ethnicity. Research groups from 12 institutions entered the competition and submitted a total of 13 recognition approaches ranging from descriptor-based methods to deep-learning models. The majority of submissions focused on ensemble based methods combining either representations from multiple deep models or hand-crafted with learned image descriptors. Our analysis shows that methods incorporating deep learning models clearly outperform techniques relying solely on hand-crafted descriptors, even though both groups of techniques exhibit similar behaviour when it comes to robustness to various covariates, such presence of occlusions, changes in (head) pose, or variability in image resolution. The results of the challenge also show that there has been considerable progress since the first UERC in 2017, but that there is still ample room for further research in this area., Comment: The content of this paper was published in ICB, 2019. This ArXiv version is from before the peer review
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- 2019
18. Efficient ear alignment using a two‐stack hourglass network
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Anja Hrovatič, Peter Peer, Vitomir Štruc, and Žiga Emeršič
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convolutional neural nets ,ear biometrics ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Abstract Ear images have been shown to be a reliable modality for biometric recognition with desirable characteristics, such as high universality, distinctiveness, measurability and permanence. While a considerable amount of research has been directed towards ear recognition techniques, the problem of ear alignment is still under‐explored in the open literature. Nonetheless, accurate alignment of ear images, especially in unconstrained acquisition scenarios, where the ear appearance is expected to vary widely due to pose and view point variations, is critical for the performance of all downstream tasks, including ear recognition. Here, the authors address this problem and present a framework for ear alignment that relies on a two‐step procedure: (i) automatic landmark detection and (ii) fiducial point alignment. For the first (landmark detection) step, the authors implement and train a Two‐Stack Hourglass model (2‐SHGNet) capable of accurately predicting 55 landmarks on diverse ear images captured in uncontrolled conditions. For the second (alignment) step, the authors use the Random Sample Consensus (RANSAC) algorithm to align the estimated landmark/fiducial points with a pre‐defined ear shape (i.e. a collection of average ear landmark positions). The authors evaluate the proposed framework in comprehensive experiments on the AWEx and ITWE datasets and show that the 2‐SHGNet model leads to more accurate landmark predictions than competing state‐of‐the‐art models from the literature. Furthermore, the authors also demonstrate that the alignment step significantly improves recognition accuracy with ear images from unconstrained environments compared to unaligned imagery.
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- 2023
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19. List of contributors
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Adiguzel, Yekbun, primary, Andreoli, Laura, additional, Antonelli, Eleonora, additional, Athanassiou, Lambros, additional, Athanassiou, Panagiotis, additional, Avčin, Tadej, additional, Babel, Nina, additional, Bechmann, Nicole, additional, Benzvi, Carina, additional, Bitsadze, Victoria, additional, Bogdanos, Dimitrios P., additional, Bonam, Srinivsasa Reddy, additional, Borba, Vânia, additional, Borghi, M.O., additional, Bornstein, Stefan R., additional, Bragazzi, Nicola Luigi, additional, Carrera-Bastos, Pedro, additional, Churilov, Leonid P., additional, Crisafulli, Francesca, additional, Cruz-Domínguez, María Pilar, additional, Cugno, M., additional, Danieli, MariaGiovanna, additional, Dardiotis, Efthymios, additional, David, Paula, additional, Davidy, Tal, additional, Della-Pina, Silvia-Ebe-Lucia, additional, Dotan, Arad, additional, Dragon-Durey, Marie-Agnès, additional, Efthymiou, Georgios, additional, Ehrenfeld, Michael, additional, Elalamy, Ismail, additional, Emeršič, Nina, additional, Evelina, Kamaeva, additional, Fontana, Giulia, additional, Franceschini, Franco, additional, Fremeaux-Bacchi, Véronique, additional, Fritzler, Marvin J., additional, Galaviz-Sánchez, Maria F., additional, Ganina, K.K., additional, Gavrilova, Natalia, additional, Giacomelli, Roberto, additional, Gris, Jean-Christophe, additional, Gutierrez-Melgarejo, Caroline I., additional, Horwitz, Ehud, additional, Israeli, Eitan, additional, Jacotot, Etienne, additional, Jara, Luis J., additional, Kanduc, Darja, additional, Kessel, Christoph, additional, Khizroeva, Jamilya, additional, Kolobov, Andrei, additional, Kostoglou-Athanassiou, Ifigenia, additional, Lapin, Sergey V., additional, Lasagni, G., additional, Lerner, Aaron, additional, Lev, Danielle Zemer, additional, Lidiia, Soprun, additional, López-Zamora, Berenice, additional, Lozano, Jose Manuel, additional, Lucas Hernández, Abihai, additional, Makatsariya, Alexander, additional, Malkova, Anna, additional, Maria, Lukashenko, additional, Mayorova, Margarita A., additional, Medina, Gabriela, additional, Meroni, P.L., additional, Mevorach, Dror, additional, Muller, Sylviane, additional, N. Petrova, Natalia, additional, Nikolenko, Vladimir N., additional, Ordinola Navarro, Alberto, additional, Ordoñez-González, Irvin, additional, Paladini, Alberto, additional, Pervakova, Margarita Y., additional, Perzon, Ofer, additional, Petrova, N.V., additional, Radic, Marko, additional, Rigopoulou, Eirini I., additional, Rodrigues-Fernandes, Jorge-Manuel, additional, Rosenberg, Avi, additional, Ruscitti, Piero, additional, Ryabkova, Varvara A., additional, Saia, Rafael Simone, additional, Sankov, Sergey V., additional, Sankova, Maria V., additional, Shoenfeld, Yehuda, additional, Sinelnikov, Mikhail Y., additional, Sobolevskaia, Polina, additional, Stervbo, Ulrik, additional, Talamini, Laura, additional, Tarasov, S.A., additional, Thurner, Lorenz, additional, Tincani, Angela, additional, Tkachenko, Olga Y., additional, Tocut, M., additional, Ursini, Francesco, additional, Vera-Lastra, Olga, additional, Vieira, Angelica Thomaz, additional, Vojdani, Aristo, additional, Vojdani, Elroy, additional, Watad, Abdulla, additional, Zandman-Goddard, G., additional, Zmira, Ofir, additional, and Zohar, Daniela Noa, additional
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- 2023
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20. Multisystem inflammatory syndrome in children
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Emeršič, Nina, primary and Avčin, Tadej, additional
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- 2023
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21. Identification and validation of Alzheimer’s disease-related metabolic brain pattern in biomarker confirmed Alzheimer’s dementia patients
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Matej Perovnik, Petra Tomše, Jan Jamšek, Andreja Emeršič, Chris Tang, David Eidelberg, and Maja Trošt
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Medicine ,Science - Abstract
Abstract Metabolic brain biomarkers have been incorporated in various diagnostic guidelines of neurodegenerative diseases, recently. To improve their diagnostic accuracy a biologically and clinically homogeneous sample is needed for their identification. Alzheimer’s disease-related pattern (ADRP) has been identified previously in cohorts of clinically diagnosed patients with dementia due to Alzheimer’s disease (AD), meaning that its diagnostic accuracy might have been reduced due to common clinical misdiagnosis. In our study, we aimed to identify ADRP in a cohort of AD patients with CSF confirmed diagnosis, validate it in large out-of-sample cohorts and explore its relationship with patients’ clinical status. For identification we analyzed 2-[18F]FDG PET brain scans of 20 AD patients and 20 normal controls (NCs). For validation, 2-[18F]FDG PET scans from 261 individuals with AD, behavioral variant of frontotemporal dementia, mild cognitive impairment and NC were analyzed. We identified an ADRP that is characterized by relatively reduced metabolic activity in temporoparietal cortices, posterior cingulate and precuneus which co-varied with relatively increased metabolic activity in the cerebellum. ADRP expression significantly differentiated AD from NC (AUC = 0.95) and other dementia types (AUC = 0.76–0.85) and its expression correlated with clinical measures of global cognition and neuropsychological indices in all cohorts.
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- 2022
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22. Alterations in immunophenotype and metabolic profile of mononuclear cells during follow up in children with multisystem inflammatory syndrome (MIS-C)
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Andreja Nataša Kopitar, Jernej Repas, Larisa Janžič, Maša Bizjak, Tina Tajnšek Vesel, Nina Emeršič, Mojca Zajc Avramovič, Alojz Ihan, Tadej Avčin, and Mojca Pavlin
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MIS-C ,biomarkers ,metabolism ,B lymphocytes ,lymphocyte activation ,monocytes ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionAlthough children seem to be less susceptible to COVID-19, some of them develop a rare but serious hyperinflammatory condition called multisystem inflammatory syndrome in children (MIS-C). While several studies describe the clinical conditions of acute MIS-C, the status of convalescent patients in the months after acute MIS-C is still unclear, especially the question of persistence of changes in the specific subpopulations of immune cells in the convalescent phase of the disease.MethodsWe therefore analyzed peripheral blood of 14 children with MIS-C at the onset of the disease (acute phase) and 2 to 6 months after disease onset (post-acute convalescent phase) for lymphocyte subsets and antigen-presenting cell (APC) phenotype. The results were compared with six healthy age-matched controls.ResultsAll major lymphocyte populations (B cells, CD4 + and CD8+ T cells, and NK cells) were decreased in the acute phase and normalized in the convalescent phase. T cell activation was increased in the acute phase, followed by an increased proportion of γ/δ-double-negative T cells (γ/δ DN Ts) in the convalescent phase. B cell differentiation was impaired in the acute phase with a decreased proportion of CD21 expressing, activated/memory, and class-switched memory B cells, which normalized in the convalescent phase. The proportion of plasmacytoid dendritic cells, conventional type 2 dendritic cells, and classical monocytes were decreased, while the proportion of conventional type 1 dendritic cells was increased in the acute phase. Importantly the population of plasmacytoid dendritic cells remained decreased in the convalescent phase, while other APC populations normalized. Immunometabolic analysis of peripheral blood mononuclear cells (PBMCs) in the convalescent MIS-C showed comparable mitochondrial respiration and glycolysis rates to healthy controls.ConclusionsWhile both immunophenotyping and immunometabolic analyzes showed that immune cells in the convalescent MIS-C phase normalized in many parameters, we found lower percentage of plasmablasts, lower expression of T cell co-receptors (CD3, CD4, and CD8), an increased percentage of γ/δ DN Ts and increased metabolic activity of CD3/CD28-stimulated T cells. Overall, the results suggest that inflammation persists for months after the onset of MIS-C, with significant alterations in some immune system parameters, which may also impair immune defense against viral infections.
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- 2023
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23. Training Convolutional Neural Networks with Limited Training Data for Ear Recognition in the Wild
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Emeršič, Žiga, Štepec, Dejan, Štruc, Vitomir, and Peer, Peter
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
Identity recognition from ear images is an active field of research within the biometric community. The ability to capture ear images from a distance and in a covert manner makes ear recognition technology an appealing choice for surveillance and security applications as well as related application domains. In contrast to other biometric modalities, where large datasets captured in uncontrolled settings are readily available, datasets of ear images are still limited in size and mostly of laboratory-like quality. As a consequence, ear recognition technology has not benefited yet from advances in deep learning and convolutional neural networks (CNNs) and is still lacking behind other modalities that experienced significant performance gains owing to deep recognition technology. In this paper we address this problem and aim at building a CNNbased ear recognition model. We explore different strategies towards model training with limited amounts of training data and show that by selecting an appropriate model architecture, using aggressive data augmentation and selective learning on existing (pre-trained) models, we are able to learn an effective CNN-based model using a little more than 1300 training images. The result of our work is the first CNN-based approach to ear recognition that is also made publicly available to the research community. With our model we are able to improve on the rank one recognition rate of the previous state-of-the-art by more than 25% on a challenging dataset of ear images captured from the web (a.k.a. in the wild).
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- 2017
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24. The Unconstrained Ear Recognition Challenge
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Emeršič, Žiga, Štepec, Dejan, Štruc, Vitomir, Peer, Peter, George, Anjith, Ahmad, Adil, Omar, Elshibani, Boult, Terrance E., Safdari, Reza, Zhou, Yuxiang, Zafeiriou, Stefanos, Yaman, Dogucan, Eyiokur, Fevziye I., and Ekenel, Hazim K.
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
In this paper we present the results of the Unconstrained Ear Recognition Challenge (UERC), a group benchmarking effort centered around the problem of person recognition from ear images captured in uncontrolled conditions. The goal of the challenge was to assess the performance of existing ear recognition techniques on a challenging large-scale dataset and identify open problems that need to be addressed in the future. Five groups from three continents participated in the challenge and contributed six ear recognition techniques for the evaluation, while multiple baselines were made available for the challenge by the UERC organizers. A comprehensive analysis was conducted with all participating approaches addressing essential research questions pertaining to the sensitivity of the technology to head rotation, flipping, gallery size, large-scale recognition and others. The top performer of the UERC was found to ensure robust performance on a smaller part of the dataset (with 180 subjects) regardless of image characteristics, but still exhibited a significant performance drop when the entire dataset comprising 3,704 subjects was used for testing., Comment: International Joint Conference on Biometrics 2017
- Published
- 2017
25. Pixel-wise Ear Detection with Convolutional Encoder-Decoder Networks
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Emeršič, Žiga, Gabriel, Luka Lan, Štruc, Vitomir, and Peer, Peter
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
Object detection and segmentation represents the basis for many tasks in computer and machine vision. In biometric recognition systems the detection of the region-of-interest (ROI) is one of the most crucial steps in the overall processing pipeline, significantly impacting the performance of the entire recognition system. Existing approaches to ear detection, for example, are commonly susceptible to the presence of severe occlusions, ear accessories or variable illumination conditions and often deteriorate in their performance if applied on ear images captured in unconstrained settings. To address these shortcomings, we present in this paper a novel ear detection technique based on convolutional encoder-decoder networks (CEDs). For our technique, we formulate the problem of ear detection as a two-class segmentation problem and train a convolutional encoder-decoder network based on the SegNet architecture to distinguish between image-pixels belonging to either the ear or the non-ear class. The output of the network is then post-processed to further refine the segmentation result and return the final locations of the ears in the input image. Different from competing techniques from the literature, our approach does not simply return a bounding box around the detected ear, but provides detailed, pixel-wise information about the location of the ears in the image. Our experiments on a dataset gathered from the web (a.k.a. in the wild) show that the proposed technique ensures good detection results in the presence of various covariate factors and significantly outperforms the existing state-of-the-art., Comment: 12 pages
- Published
- 2017
26. Authorship Attribution on Short Texts in the Slovenian Language
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Gregor Gabrovšek, Peter Peer, Žiga Emeršič, and Borut Batagelj
- Subjects
authorship attribution ,BERT model fine-tuning ,dataset construction ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The study investigates the task of authorship attribution on short texts in Slovenian using the BERT language model. Authorship attribution is the task of attributing a written text to its author, frequently using stylometry or computational techniques. We create five custom datasets for different numbers of included text authors and fine-tune two BERT models, SloBERTa and BERT Multilingual (mBERT), to evaluate their performance in closed-class and open-class problems with varying numbers of authors. Our models achieved an F1 score of approximately 0.95 when using the dataset with the comments of the top five users by the number of written comments. Training on datasets that include comments written by an increasing number of people results in models with a gradually decreasing F1 score. Including out-of-class comments in the evaluation decreases the F1 score by approximately 0.05. The study demonstrates the feasibility of using BERT models for authorship attribution in short texts in the Slovenian language.
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- 2023
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27. Identification and validation of Alzheimer’s disease-related metabolic brain pattern in biomarker confirmed Alzheimer’s dementia patients
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Perovnik, Matej, Tomše, Petra, Jamšek, Jan, Emeršič, Andreja, Tang, Chris, Eidelberg, David, and Trošt, Maja
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- 2022
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28. Recent Advances in Synthesis and Interaction of Speech, Text, and Vision
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Orynbay, Laura, primary, Razakhova, Bibigul, additional, Peer, Peter, additional, Meden, Blaž, additional, and Emeršič, Žiga, additional
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- 2024
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29. Deep Sclera Segmentation and Recognition
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Rot, Peter, Vitek, Matej, Grm, Klemen, Emeršič, Žiga, Peer, Peter, Štruc, Vitomir, Kang, Sing Bing, Series Editor, Singh, Sameer, Founding Editor, Bischof, Horst, Advisory Editor, Bowden, Richard, Advisory Editor, Dickinson, Sven, Advisory Editor, Jia, Jiaya, Advisory Editor, Lee, Kyoung Mu, Advisory Editor, Sato, Yoichi, Advisory Editor, Schiele, Bernt, Advisory Editor, Sclaroff, Stan, Advisory Editor, Uhl, Andreas, editor, Busch, Christoph, editor, Marcel, Sébastien, editor, and Veldhuis, Raymond, editor
- Published
- 2020
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30. Constellation-Based Deep Ear Recognition
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Štepec, Dejan, Emeršič, Žiga, Peer, Peter, Štruc, Vitomir, Celebi, M. Emre, Series Editor, Jiang, Richard, editor, Li, Chang-Tsun, editor, Crookes, Danny, editor, Meng, Weizhi, editor, and Rosenberger, Christophe, editor
- Published
- 2020
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31. Ear Recognition: More Than a Survey
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Emeršič, Žiga, Štruc, Vitomir, and Peer, Peter
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
Automatic identity recognition from ear images represents an active field of research within the biometric community. The ability to capture ear images from a distance and in a covert manner makes the technology an appealing choice for surveillance and security applications as well as other application domains. Significant contributions have been made in the field over recent years, but open research problems still remain and hinder a wider (commercial) deployment of the technology. This paper presents an overview of the field of automatic ear recognition (from 2D images) and focuses specifically on the most recent, descriptor-based methods proposed in this area. Open challenges are discussed and potential research directions are outlined with the goal of providing the reader with a point of reference for issues worth examining in the future. In addition to a comprehensive review on ear recognition technology, the paper also introduces a new, fully unconstrained dataset of ear images gathered from the web and a toolbox implementing several state-of-the-art techniques for ear recognition. The dataset and toolbox are meant to address some of the open issues in the field and are made publicly available to the research community., Comment: 17 pages, paper accepted to Neurocomputing
- Published
- 2016
32. Cerebrospinal fluid p‐tau181, 217, and 231 in definite Creutzfeldt–Jakob disease with and without concomitant pathologies.
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Emeršič, Andreja, Ashton, Nicholas J., Vrillon, Agathe, Lantero‐Rodriguez, Juan, Mlakar, Jernej, Gregorič Kramberger, Milica, Gonzalez‐Ortiz, Fernando, Kac, Przemysław R., Dulewicz, Maciej, Hanrieder, Jörg, Vanmechelen, Eugeen, Rot, Uroš, Zetterberg, Henrik, Karikari, Thomas K., Čučnik, Saša, and Blennow, Kaj
- Abstract
INTRODUCTION: The established cerebrospinal fluid (CSF) phosphorylated tau181 (p‐tau181) may not reliably reflect concomitant Alzheimer's disease (AD) and primary age‐related tauopathy (PART) found in Creutzfeldt–Jakob disease (CJD) at autopsy. METHODS: We investigated CSF N‐terminal p‐tau181, p‐tau217, and p‐tau231 with in‐house Simoa assays in definite CJD (n = 29), AD dementia (n = 75), mild cognitive impairment (MCI) due to AD (n = 65), and subjective cognitive decline (SCD, n = 28). Post‐mortem examination performed in patients with CJD 1.3 (0.3–14.3) months after CSF collection revealed no co‐pathology in 10, concomitant AD in 8, PART in 8, and other co‐pathologies in 3 patients. RESULTS: N‐terminal p‐tau was increased in CJD versus SCD (p < 0.0001) and correlated with total tau (t‐tau) in the presence of AD and PART co‐pathology (rho = 0.758–0.952, p ≤ 001). Concentrations in CJD+AD were indistinguishable from AD dementia, with the largest fold‐change in p‐tau217 (11.6), followed by p‐tau231 and p‐tau181 (3.2–4.5). DISCUSSION: Variable fold‐changes and correlation with t‐tau suggest that p‐tau closely associates with neurodegeneration and concomitant AD in CJD. Highlights: N‐terminal phosphorylated tau (p‐tau) biomarkers are increased in Creutzfeldt–Jakob disease (CJD) with and without concomitant AD.P‐tau217, p‐tau231, and p‐tau181 correlate with total tau (t‐tau) and increase in the presence of amyloid beta (Aβ) co‐pathology.N‐terminal p‐tau181 and p‐tau231 in Aβ‐negative CJD show variation among PRNP genotypes.Compared to mid‐region–targeting p‐tau181, cerebrospinal fluid (CSF) N‐terminal p‐tau has greater potential to reflect post‐mortem neuropathology in the CJD brain. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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33. Deep Ear Recognition Pipeline
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Emeršič, Žiga, Križaj, Janez, Štruc, Vitomir, Peer, Peter, Kacprzyk, Janusz, Series Editor, Hassaballah, Mahmoud, editor, and Hosny, Khalid M., editor
- Published
- 2019
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34. The influence of supersaturation at low rime accretion rates on thunderstorm electrification from field-independent graupel-ice crystal collisions
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Emersic, C. and Saunders, C.P.R.
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- 2020
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35. Control of liquid crystals combining surface acoustic waves, nematic flows, and microfluidic confinement
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Vásquez-Montoya, Gustavo A., primary, Emeršič, Tadej, additional, Atzin, Noe, additional, Tavera-Vázquez, Antonio, additional, Mozaffari, Ali, additional, Zhang, Rui, additional, Guzmán, Orlando, additional, Snezhko, Alexey, additional, Nealey, Paul F., additional, and de Pablo, Juan J., additional
- Published
- 2024
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36. Nestabilna brazgotina kot kronična rana in možnost nastanka Marjolinovega ulkusa
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Luka Emeršič and Albin Stritar
- Subjects
ulkus ,opeklina ,rana ,karcinom ,kirurgija ,Medicine - Abstract
Marjolinov ulkus (MU) je redka, vendar izjemno agresivna oblika ulcerativnega ploščatoceličnega karcinoma, ki nastane iz kronične rane, najpogosteje po opeklinski poškodbi. Naš cilj je opozoriti na nevarnost maligne preobrazbe nestabilne brazgotine kot kronične rane (nastanek Marjolinovega ulkusa) ter možnosti njenega zdravljenja pri nas ter drugod po svetu. V Univerzitetnem kliničnem centru Ljubljana na Kliničnem oddelku za plastično, rekonstrukcijsko, estetsko kirurgijo in opekline smo v obdobju zadnjih 13 let obravnavali 5 bolnikov, operiranih zaradi nestabilne brazgotine, ki se je izkazovala kot kronična rana. Za potrebe članka smo opravili pregled angleške literature na temo ulceracije nestabilne opeklinske brazgotine. Marjolinov ulkus je epiteliomska sprememba, ki jo je možno preprečiti. Vsaka večja rana, ki se prepusti sekundarnemu celjenju, ima potencial za razvoj v kronično rano, ki lahko ulcerira in vodi v maligno spremembo. Še posebej moramo biti pozorni pri opeklinskih ranah ter brazgotinah. Če se pojavi kronična rana, je potrebna biopsija in kasnejše zdravljenje. Uspešnost zdravljenja je bila največja, kadar se je rana obravnavala, še preden se je preobrazila.
- Published
- 2020
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37. Microfluidic control over topological states in channel-confined nematic flows
- Author
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Simon Čopar, Žiga Kos, Tadej Emeršič, and Uroš Tkalec
- Subjects
Science - Abstract
It is interesting phenomenon that chiral order can emerge in intrinsically achiral liquid crystals. Here Čopar et al. demonstrate achiral-to-chiral transition of the nematic liquid crystals flow in microfluidic channels and their behaviour, stability, and dependence on geometric and material parameters.
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- 2020
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38. Genetic Polymorphisms in Oxidative Stress and Inflammatory Pathways as Potential Biomarkers in Alzheimer’s Disease and Dementia
- Author
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David Vogrinc, Milica Gregorič Kramberger, Andreja Emeršič, Saša Čučnik, Katja Goričar, and Vita Dolžan
- Subjects
Alzheimer’s disease ,oxidative stress ,inflammation ,polymorphism ,biomarker ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Oxidative stress and neuroinflammation are important processes involved in Alzheimer’s disease (AD) and mild cognitive impairment (MCI). Numerous risk factors, including genetic background, can affect the complex interplay between those mechanisms in the aging brain and can also affect typical AD hallmarks: amyloid plaques and neurofibrillary tangles. Our aim was to evaluate the association of polymorphisms in oxidative stress- and inflammation-related genes with cerebrospinal fluid (CSF) biomarker levels and cognitive test results. The study included 54 AD patients, 14 MCI patients with pathological CSF biomarker levels, 20 MCI patients with normal CSF biomarker levels and 62 controls. Carriers of two polymorphic IL1B rs16944 alleles had higher CSF Aβ1–42 levels (p = 0.025), while carriers of at least one polymorphic NFE2L2 rs35652124 allele had lower CSF Aβ1–42 levels (p = 0.040). Association with IL1B rs16944 remained significant in the AD group (p = 0.029). Additionally, MIR146A rs2910164 was associated with Aβ42/40 ratio (p = 0.043) in AD. Significant associations with cognitive test scores were observed for CAT rs1001179 (p = 0.022), GSTP1 rs1138272 (p = 0.005), KEAP1 rs1048290 and rs9676881 (both p = 0.019), as well as NFE2L2 rs35652124 (p = 0.030). In the AD group, IL1B rs1071676 (p = 0.004), KEAP1 rs1048290 and rs9676881 (both p = 0.035) remained associated with cognitive scores. Polymorphisms in antioxidative and inflammation genes might be associated with CSF biomarkers and cognitive test scores and could serve as additional biomarkers contributing to early diagnosis of dementia.
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- 2023
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39. Evaluation and analysis of ear recognition models: performance, complexity and resource requirements
- Author
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Emeršič, Žiga, Meden, Blaž, Peer, Peter, and Štruc, Vitomir
- Published
- 2020
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40. Case Report: Necrotizing Stomatitis as a Manifestation of COVID-19-Associated Vasculopathy
- Author
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Nina Emeršič, Tanja Tomaževič, Olga Točkova, Matjaž Kopač, Metka Volavšek, Damjana Ključevšek, and Tadej Avčin
- Subjects
necrotizing stomatitis ,vasculitis ,hypertension ,SARS-CoV-2 ,COVID-19 associated vasculopathy ,case report ,Pediatrics ,RJ1-570 - Abstract
Necrotizing stomatitis is a rare, acute-onset disease that is usually associated with severely malnourished children or diminished systemic resistance. We describe a 1-year-old girl who developed necrotizing stomatitis, vasculitic rash, skin desquamation on the fingers and toes, and persistent hypertension after serologically confirmed SARS-CoV-2 infection. Her laboratory investigations revealed positive IgG anticardiolipin and IgG anti-β2 glycoprotein antibodies, and biopsy of the mucosa of the lower jaw showed necrosis and endothelial damage with mural thrombi. Swollen endothelial cells of small veins in the upper dermis were confirmed also by electron microscopy. As illustrated by our case, necrotizing stomatitis may develop as a rare complication associated with SARS-CoV-2 infection and can be considered as a part of the clinical spectrum of COVID-19 vasculopathy. The pathogenic mechanism could involve a consequence of inflammatory events with vasculopathy, hypercoagulability, and damage of endothelial cells as a response to SARS-CoV-2 infection.
- Published
- 2021
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41. Sample-Size Determination Methodologies for Machine Learning in Medical Imaging Research: A Systematic Review
- Author
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Balki, Indranil, Amirabadi, Afsaneh, Levman, Jacob, Martel, Anne L., Emersic, Ziga, Meden, Blaz, Garcia-Pedrero, Angel, Ramirez, Saul C., Kong, Dehan, Moody, Alan R., and Tyrrell, Pascal N.
- Published
- 2019
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42. Intrathecal immunoglobulin synthesis: The potential value of an adjunct test
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Emersic, Andreja, Anadolli, Vanesa, Krsnik, Mladen, and Rot, Uros
- Published
- 2019
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43. Comprehensive Care and Education Can Improve Nutritional and Growth Outcomes in Children with Persistent Cow’s Milk, Egg, or Peanut Allergies: A Five-Year Follow-Up Study of Nutritional Status
- Author
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Poredoš, Tomaž, primary, Vesel Tajnšek, Tina, additional, Koren Jeverica, Anja, additional, Zajc Avramovič, Mojca, additional, Markelj, Gašper, additional, Emeršič, Nina, additional, and Avčin, Tadej, additional
- Published
- 2023
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44. Diagnostic value of kappa free light chain index in patients with primary progressive multiple sclerosis – a multicentre study
- Author
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Hegen, Harald, primary, Berek, Klaus, additional, Cavalla, Paola, additional, Christiansen, Mikael, additional, Emeršič, Andreja, additional, Di Filippo, Massimiliano, additional, Gaetani, Lorenzo, additional, Hassler, Michaela, additional, Leurs, Cyra, additional, Milosavljevic, Dejan, additional, van Pesch, Vincent, additional, Petersen, Thor, additional, Presslauer, Stefan, additional, Rosenstein, Igal, additional, Rot, Uroš, additional, Schnabl, Christine, additional, Teunissen, Charlotte, additional, Vecchio, Domizia, additional, Vercellino, Marco, additional, and Deisenhammer, Florian, additional
- Published
- 2023
- Full Text
- View/download PDF
45. Plasma p-tau212: antemortem diagnostic performance and prediction of autopsy verification of Alzheimer’s disease neuropathology
- Author
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Kac, Przemysław R., primary, González-Ortiz, Fernando, additional, Emeršič, Andreja, additional, Dulewicz, Maciej, additional, Koutarapu, Srinivas, additional, Turton, Michael, additional, An, Yang, additional, Smirnov, Denis, additional, Kulczyńska-Przybik, Agnieszka, additional, Varma, Vijay, additional, Ashton, Nicholas J., additional, Montoliu-Gaya, Laia, additional, Camporesi, Elena, additional, Winkel, Izabela, additional, Paradowski, Bogusław, additional, Moghekar, Abhay, additional, Troncoso, Juan C., additional, Brinkmalm, Gunnar, additional, Resnick, Susan M, additional, Mroczko, Barbara, additional, Kvartsberg, Hlin, additional, Gregorič Kramberger, Milica, additional, Hanrieder, Jörg, additional, Čučnik, Saša, additional, Harrison, Peter, additional, Zetterberg, Henrik, additional, Lewczuk, Piotr, additional, Thambisetty, Madhav, additional, Rot, Uroš, additional, Galasko, Douglas, additional, Blennow, Kaj, additional, and Karikari, Thomas K., additional
- Published
- 2023
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46. The characteristics of patients with COVID‐19–associated pediatric vasculitis: an international, multicenter Study: comment on the article by Batu et al
- Author
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Emeršič, Nina, primary and Avčin, Tadej, additional
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- 2023
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47. Authorship Attribution on Short Texts in the Slovenian Language
- Author
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Gabrovšek, Gregor, primary, Peer, Peter, additional, Emeršič, Žiga, additional, and Batagelj, Borut, additional
- Published
- 2023
- Full Text
- View/download PDF
48. Kirurška obravnava bolnikov z malformacijo Chiari I v različnih starostnih obdobjih
- Author
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Luka Emeršič, Tomaž Šmigoc, and Janez Ravnik
- Subjects
Nevrokirurgija ,anomalija ,starost ,kraniektomija ,analiza ,Medicine - Abstract
Izhodišče: Primerjati kirurško obravnavo bolnikov z malformacijo Chiari I (CM-I) pri nas in po svetu ter ugotoviti primerljivost uspeha pri uporabi različnih kirurških tehnik. Metode: Opravili smo retrospektivno analizo 10 bolnikov, ki so bili operirani zaradi CM-I v UKC Maribor, Kirurška klinika, Oddelek za nevrokirurgijo v obdobju od januarja 2010 do maja 2016. Podatke o bolnikih smo zbrali v tabele in opravili deskriptivno statistično analizo vzorca. Pregledali smo literaturo v angleščini v podatkovnih bazah PubMed in Ovid na temo kirurškega zdravljenja CM-I. Rezultate raziskav smo primerjali s svojimi ugotovitvami. Rezultati: V obdobju od januarja 2010 do maja 2016 smo operirali 10 bolnikov: 8 žensk in 2 moška v starosti 11–57 let. Simptomi pred operacijo so trajali od 1 meseca do 29 let. Glavoboli so bili prisotni pri 8 bolnikih, bolečina v vratu je bila prisotna pri 4 bolnikih, vrtoglavica pri 2 bolnikih, mravljinčenje v rokah pa pri enem bolniku. Znaki pred operacijo pa so trajali od 1 leta do 29 let. Pri 2 bolnikih je bila prisotna spastična tetrapareza, pri 2 bolnikih motnja senzibilitete in pri 1 bolniku tremor rok. Pridruženo hidromielijo je imelo 5 bolnikov. Skoliozo sta imeli 2 bolnici. Pri vseh 10 bolnikih smo se odločili za kirurško obravnavo. V skupini 10 bolnikov, ki smo jih obravnavali, ni nihče umrl. Pri 2 bolnikih smo zaznali tekočinsko kolekcijo likvorja v podkožju, pri 1 bolniku tudi povišano telesno temperaturo in oteklino, izcedek iz rane pa pri 2 bolnikih. Bolnike smo sledili od 6 mesecev do 6 let. Vsi bolniki so navajali izboljšanje simptomov po operaciji. Zaključek: Rezultati naše raziskave so primerljivi z rezultati podobnih raziskav v literaturi. Ob tem pa moramo opomniti, da je bilo število bolnikov, vključenih v našo študijo, sorazmerno majhno. Razvidno je, da nikjer ni natančno določeno, kdaj se je treba odločiti za določen tip operacije, prav tako je v literaturi prisotna velika raznolikost v izidih po operaciji. Kirurško obravnavo je treba za vsakega bolnika individualizirati.
- Published
- 2019
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49. Constellation-Based Deep Ear Recognition
- Author
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Štepec, Dejan, primary, Emeršič, Žiga, additional, Peer, Peter, additional, and Štruc, Vitomir, additional
- Published
- 2020
- Full Text
- View/download PDF
50. Exceptional stability of a perilipin on lipid droplets depends on its polar residues, suggesting multimeric assembly
- Author
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Manuel Giménez-Andrés, Tadej Emeršič, Sandra Antoine-Bally, Juan Martin D'Ambrosio, Bruno Antonny, Jure Derganc, and Alenka Čopič
- Subjects
lipid droplet ,perilipin 4 ,amphipathic helix ,adipocyte ,apolipoprotein ,lipid droplet size ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Numerous proteins target lipid droplets (LDs) through amphipathic helices (AHs). It is generally assumed that AHs insert bulky hydrophobic residues in packing defects at the LD surface. However, this model does not explain the targeting of perilipins, the most abundant and specific amphipathic proteins of LDs, which are weakly hydrophobic. A striking example is Plin4, whose gigantic and repetitive AH lacks bulky hydrophobic residues. Using a range of complementary approaches, we show that Plin4 forms a remarkably immobile and stable protein layer at the surface of cellular or in vitro generated oil droplets, and decreases LD size. Plin4 AH stability on LDs is exquisitely sensitive to the nature and distribution of its polar residues. These results suggest that Plin4 forms stable arrangements of adjacent AHs via polar/electrostatic interactions, reminiscent of the organization of apolipoproteins in lipoprotein particles, thus pointing to a general mechanism of AH stabilization via lateral interactions.
- Published
- 2021
- Full Text
- View/download PDF
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