249 results on '"Enbo Ma"'
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2. Dietary Patterns and New-Onset Type 2 Diabetes Mellitus in Evacuees after the Great East Japan Earthquake: A 7-Year Longitudinal Analysis in the Fukushima Health Management Survey
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Enbo Ma, Tetsuya Ohira, Hiroyuki Hirai, Kanako Okazaki, Masanori Nagao, Fumikazu Hayashi, Hironori Nakano, Yuriko Suzuki, Akira Sakai, Atsushi Takahashi, Junichiro J. Kazama, Hirooki Yabe, Masaharu Maeda, Seiji Yasumura, Hitoshi Ohto, Kenji Kamiya, and Michio Shimabukuro
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dietary pattern ,diabetes mellitus ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Background: Dietary patterns may be linked to the incidence of type 2 diabetes mellitus (T2DM) after disasters. We investigated the association between dietary patterns and new-onset T2DM in evacuees of the Great East Japan Earthquake and the Fukushima Daiichi Nuclear Power Plant (FDNPP) accident. Methods: Among the 22,740 non-diabetic participants aged 20–89 years who completed the dietary assessment in the Fukushima Health Management Survey between July 2011 and November 2012, the incidence of T2DM was evaluated until 2018. Principal component analysis with varimax rotation was applied to derive dietary patterns based on a validated, short-form food frequency questionnaire. The identified dietary patterns were categorized as typical Japanese, juice, and meat. Results: The cumulative incidence of T2DM was 18.0 and 9.8 per 1000 person-years in men and women, respectively, during the follow-up period. The multiple-adjusted hazard ratio (95% confidence interval) of the highest vs. lowest quartile of the typical Japanese pattern scores for T2DM was 0.80 (0.68, 0.94; P for trend = 0.015) in total, 0.85 (0.68, 1.06; P for trend = 0.181) in men, and 0.76 (0.60, 0.95; P for trend = 0.04) in women. Conclusions: A typical Japanese dietary pattern may be associated with a reduced new-onset T2DM risk in evacuees, especially women, after the Great East Japan Earthquake and the FDNPP accident.
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- 2022
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3. Increased RNAi Efficiency by dsEGFP-Induced Up-Regulation of Two Core RNAi Pathway Genes (OfDicer2 and OfAgo2) in the Asian Corn Borer (Ostrinia furnacalis)
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Yunhe Fan, Mureed Abbas, Xiaojian Liu, Yanli Wang, Huifang Song, Tao Li, Enbo Ma, Kun Yan Zhu, and Jianzhen Zhang
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Core RNAi pathway gene ,Ostrinia furnacalis ,RNAi efficiency ,siRNA-mediated pathway ,Science - Abstract
RNA interference (RNAi) is a sequence-specific gene silencing mechanism that holds great promise for effective management of agricultural pests. Previous studies have shown that the efficacy of RNAi varies among different insect species, which limits its wide spread application in the field of crop protection. In this study, we identified and characterized six core RNAi pathway genes including OfDicer1, OfDicer2, OfR2D2, OfAgo1, OfAgo2, and OfAgo3 from the transcriptomic database of the Asian corn borer (Ostrinia furnacalis). Domain analysis showed that the six deduced proteins contained the necessary functional domains. Insect developmental stage- and tissue-specific expression analysis showed that five genes were expressed in all the stages and tissues examined except OfAgo3, which showed low expression in larvae, and high expression in pupae and adults and in the midgut. RT-qPCR was performed to examine the response of these six genes to exogenous double-stranded RNA (dsRNA). Interestingly, the transcript levels of OfDicer2 and OfAgo2 were significantly enhanced after the injection of dsEGFP at different time points and tissues investigated. Consequently, the RNAi efficiency in targeting the insect endogenous genes can be greatly enhanced in the hemolymph or midgut. Taken together, our investigations suggest that RNAi efficiency can be enhanced by pre-injection of dsRNA to induce the RNAi core machinery genes, which could be a useful strategy to improving RNAi efficiency for studying gene functions under laboratory conditions.
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- 2022
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4. TDRD5 Is Required for Spermatogenesis and Oogenesis in Locusta migratoria
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Sufang Deng, Junxiu Wang, Enbo Ma, Jianzhen Zhang, and Shuping Xing
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TDRD5 ,spermatogenesis ,oocyte development ,vitellogenesis ,Locusta migratoria ,Science - Abstract
Tudor family proteins exist in all eukaryotic organisms and play a role in many cellular processes by recognizing and binding to proteins with methylated arginine or lysine residues. TDRD5, a member of Tudor domain-containing proteins (TDRDs), has been implicated in the P-element-induced wimpy testis-interacting RNA (piRNA) pathway and germ cell development in some model species, but little is known about its function in other species. Therefore, we identified and characterized LmTDRD5, the TDRD5 ortholog in Locusta migratoria, a hemimetabolous pest. The LmTdrd5 gene has 19 exons that encode a protein possessing a single copy of the Tudor domain and three LOTUS domains at its N-terminus. qRT-PCR analysis revealed a high LmTdrd5 expression level in genital glands. Using RNA interference, LmTdrd5 knockdown in males led to a lag in meiosis phase transition, decreased spermatid elongation and sperm production, and downregulated the expression of the two germ cell-specific transcription factors, LmCREM and LmACT, as well as the sperm tail marker gene LmQrich2.LmTdrd5 knockdown in females reduced the expression levels of vitellogenin (Vg) and Vg receptor (VgR) and impaired ovarian development and oocyte maturation, thus decreasing the hatchability rate. These results demonstrate that LmTdrd5 is essential for germ cell development and fertility in locusts, indicating a conserved function for TDRD5.
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- 2022
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5. Dietary Antioxidant Micronutrients and All-Cause Mortality: The Japan Collaborative Cohort Study for Evaluation of Cancer Risk
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Enbo Ma, Hiroyasu Iso, Kazumasa Yamagishi, Masahiko Ando, Kenji Wakai, and Akiko Tamakoshi
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dietary antioxidants ,carotenoids ,vitamin C ,vitamin E ,all-cause mortality ,Medicine (General) ,R5-920 - Abstract
Background: Oxidative stress, the imbalance between pro- and antioxidants, has been implicated in the etiology and pathophysiology of the incidence and mortality of many diseases. We aim to investigate the relations of dietary intakes of vitamin C and E and main carotenoids with all-cause mortality in Japanese men and women. Methods: The Japan Collaborative Cohort Study for Evaluation of Cancer Risk had 22,795 men and 35,539 women, aged 40–79 years at baseline (1988–1990), who completed a valid food frequency questionnaire and were followed up to the end of 2009. Results: There were 6,179 deaths in men and 5,355 deaths in women during the median follow-up of 18.9 years for men and 19.4 years for women. Multivariate hazard ratios for the highest versus lowest quintile intakes in women were 0.83 (95% confidence interval [CI], 0.76–0.90; P for trend < 0.0001) for vitamin C, 0.85 (95% CI, 0.78–0.93; P for trend < 0.0001) for vitamin E, 0.88 (95% CI, 0.81–0.96; P for trend = 0.0006) for β-carotene, and 0.90 (95% CI, 0.82–0.98; P for trend = 0.0002) for β-cryptoxanthin. The joint effect of any two of these highly correlated micronutrients showed significant 12–17% reductions in risk in the high-intake group compared with the low-intake group in women. These significant associations were also observed in the highest quintile intakes of vitamin C, vitamin E, and β-carotene in female non-smokers but were not observed in female smokers, male smokers, and non-smokers. Conclusions: Higher dietary intakes of antioxidant vitamins may reduce the risk of all-cause mortality in middle-aged Japanese women, especially female non-smokers.
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- 2018
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6. Pneumonia mortality and healthcare utilization in young children in rural Bangladesh: a prospective verbal autopsy study
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Farzana Ferdous, Shahnawaz Ahmed, Sumon Kumar Das, Mohammod Jobayer Chisti, Dilruba Nasrin, Karen L. Kotloff, Myron M. Levine, James P. Nataro, Enbo Ma, Khitam Muhsen, Yukiko Wagatsuma, Tahmeed Ahmed, and Abu Syed Golam Faruque
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Death ,Infant ,Health care ,Health facilities ,Pneumonia ,Arctic medicine. Tropical medicine ,RC955-962 - Abstract
Abstract Background The present study aimed to examine the risk factors for death due to pneumonia in young children and healthcare behaviors of the guardians for children in rural Bangladesh. A prospective autopsy study was conducted among guardians of children aged 4 weeks to 59 months in Mirzapur, Bangladesh, from 2008 to 2012. Results Pneumonia was the primary cause of death, accounting for 26.4% (n = 81) of all 307 deaths. Of the pneumonia deaths, 58% (n = 47) deaths occurred in younger infants (aged 4 weeks to
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- 2018
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7. Fetal growth restriction in rural Bangladesh: a prospective study
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Farzana Ferdous, Md. Harunor Rashid, Enbo Ma, Rubhana Raqib, Hiromi Hamada, and Yukiko Wagatsuma
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Bangladesh ,Fetal growth restriction (FGR) ,Gestational age ,Low birth weight ,Maternal malnutrition ,Arctic medicine. Tropical medicine ,RC955-962 - Abstract
Abstract Background Fetal growth restriction (FGR) and low birth weight(LBW) are serious public health problems. In developing countries, the incidence of low birth weight is predominantly the result of FGR, and both low birth weight and FGR are associated with neonatal death and later growth and development. Fetal growth charts are important for assessing the size of the fetus during pregnancy. The aims of this study were to describe the fetal growth pattern of a population in rural Bangladesh where maternal undernutrition is prevalent and to compare the timing of FGR in that population with WHO and INTERGROWTH- 21st international reference values. Methods From November 2001 to October 2003, pregnant women were recruited in Matlab, a sub district of Bangladesh, and underwent three follow-up ultrasound examinations during pregnancy for measurement of the parameters of the fetal head, abdomen, and femur. The data were fitted to a linear-cubic model, and the derived values were compared with international reference values. Results A total of 2678 singleton pregnancies were included in the analyses. The mean (SD) maternal age was 25.9 (5.8) years (range, 14–47 years). The mean (SD) early pregnancy BMI was 20.1 (2.6) kg/m2, and 27.6% of the women were underweight (BMI
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- 2018
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8. Molecular Characterizations and Functional Analyses of LmR2D2 in the Locusta migratoria siRNA Pathway
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Lu Gao, Yanli Wang, Mureed Abbas, Tingting Zhang, Enbo Ma, Shuping Xing, Kun Yan Zhu, and Jianzhen Zhang
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Locusta migratoria ,dsRNA-binding protein ,R2D2 ,RNA interference ,siRNA pathway ,Science - Abstract
Small interfering RNAs (siRNAs) are non-coding RNAs with a length of 21~23 nucleotides (nt) and present in almost all eukaryotes. The formation of siRNA is a highly conserved post-transcriptional gene-silencing mechanism mediated by key proteins, including Dicer2, Argonaute2 (Ago2) and R2D2. R2D2 has been identified as a double-stranded RNA (dsRNA)-binding protein and reported as an integral component of the siRNA pathway in Drosophila. However, the involvement of R2D2 in the siRNA pathway of Locusta migratoria is still unknown. In the present study, we identified an LmR2D2 gene from the transcriptome of L. migratoria. It consists of a 954-bp open reading frame that encodes a protein of 318 amino acid residues. Further sequence analysis revealed that LmR2D2 possesses two tandem dsRNA-binding domains (dsRBD) at the N-terminus. Analysis of the developmental expression profile of LmR2D2 indicated that its transcript level was stable in third-instar nymphs of L. migratoria, whereas the tissue-dependent expression profile exhibited high levels of expression of LmR2D2 in the testis and ovary. When LmR2D2 was silenced by RNAi, the RNAi efficiency against Lmβ-tubulin as a marker gene was significantly diminished, as indicated by the 37.7% increased Lmβ-tubulin transcript level. Additionally, the prokaryotic expression system was used to obtain the LmR2D2 supernatant protein. By incubating the LmR2D2 protein with biotin-dsRNA, we found that LmR2D2 can bind to dsRNA in vitro, which supports our conclusion that LmR2D2 plays an essential role in the siRNA pathway of L. migratoria.
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- 2021
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9. A thermostable Cas9 with increased lifetime in human plasma
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Lucas B. Harrington, David Paez-Espino, Brett T. Staahl, Janice S. Chen, Enbo Ma, Nikos C. Kyrpides, and Jennifer A. Doudna
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Science - Abstract
While current CRISPR-Cas9 tools have revolutionized genome editing, they are not suitable for applications at elevated temperatures. Here, the authors characterize GeoCas9 from Geobacillus stearothermophilus, which is active up to 70°C and is stable in human plasma.
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- 2017
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10. Mortality trends for ischemic heart disease in China: an analysis of 102 continuous disease surveillance points from 1991 to 2009
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Xia Wan, Hongyan Ren, Enbo Ma, and Gonghuan Yang
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Ischemic heart disease ,Mortality rate ,Disease surveillance points ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background In the past 20 years, the trends of ischemic heart disease (IHD) mortality in China have been described in divergent claims. This research analyzes mortality trends for IHD by using the data from 102 continuous Disease Surveillance Points (DSP) from 1991 to 2009. Method The 102 continuous DSP covered 7.3 million people during the period 1991–2000, and then were expanded to a population of 52 million in the same areas for 2004–2009. The data were adjusted by using garbage code redistribution and underreporting rate, mapped from international classification of diseases ICD-9 to ICD-10. The mortality rates for IHD were further adjusted by the crude death proportion multiplied by the total number of deaths in the mortality envelope, which was calculated by using logrt = a + bt. Age-standard death rates (ASDRs) were computed using China’s 2010 census population structure. Trend in IHD was calculated from ASDRs by using a joinpoint regression model. Results The IHD ASDRs increased in total in regions with an average annual percentage change (AAPC) 4.96%, especially for the Southwest (AAPC = 7.97%) and Northeast areas (AAPC = 7.10%), and for male and female subjects (with 5% AAPC) as well. In rural areas, the year 2000 was a cut-off point for mortality rate with annual percentage change increasing from 3.52% in 1991–2000 to 9.02% in 2000–2009, which was much higher than in urban areas (AAPC = 1.05%). And the proportion of deaths increased in older adults, and more male deaths occurred before age 60 compared to female deaths. Conclusion By observing a wide range of areas across China from 1991 to 2009, this paper concludes that the ASDR trend for IHD increased. These trends reflect changes in the Chinese standard of living and lifestyle with diets higher in fat, higher blood lipids and increased body weight.
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- 2017
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11. Dietary Patterns and Progression of Impaired Kidney Function in Japanese Adults: A Longitudinal Analysis for the Fukushima Health Management Survey, 2011–2015
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Enbo Ma, Tetsuya Ohira, Seiji Yasumura, Hironori Nakano, Eri Eguchi, Makoto Miyazaki, Mitsuaki Hosoya, Akira Sakai, Atsushi Takahashi, Hiromasa Ohira, Junichiro Kazama, Michio Shimabukuro, Hirooki Yabe, Masaharu Maeda, Hitoshi Ohto, and Kenji Kamiya
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chronic kidney disease ,dietary pattern ,eGFR ,Fukushima Health Management Survey ,proteinuria ,trajectory analysis ,Nutrition. Foods and food supply ,TX341-641 - Abstract
To investigate associations between dietary patterns and the risk of impaired kidney function, we analyzed data from 14,732 participants (40–89 years) who completed the baseline diet questionnaire of The Fukushima Health Management Survey in 2011. The incidence of chronic kidney disease (CKD) (estimated glomerular filtration rate (eGFR) 2 or proteinuria (≥1+ by dipstick test)) and annual changes in eGFR were assessed from 2012 to 2015. Three major dietary patterns were identified. The adjusted cumulative incidence ratio of the highest vs. lowest tertile of a vegetable diet scores was 0.90 (95% confidence interval (CI): 0.82, 1.00) for eGFR < 60 mL/min/1.73 m2, 0.68 (95% CI: 0.52, 0.90) for proteinuria, and 0.88 (95% CI: 0.80, 0.97) for CKD (P for trend = 0.031, 0.007, and 0.005, respectively). The incident risk of CKD in the highest tertile of juice diet scores was 18% higher than the lowest tertile. The odds ratio of the highest vs. lowest tertile of vegetable diet scores was 0.85 (95% CI: 0.75, 0.98) in the rapidly decreasing eGFR group (P for trend = 0.009). We did not observe significant associations for the meat dietary pattern. A Japanese vegetable diet could reduce the risk of developing impaired kidney function and CKD.
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- 2021
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12. DDX6 Is Essential for Oocyte Development and Maturation in Locusta migratoria
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Junxiu Wang, Tingting Li, Sufang Deng, Enbo Ma, Jianzhen Zhang, and Shuping Xing
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DEAD-box helicase ,DDX6 ,oocyte ,vitellogenesis ,Locusta migratoria ,Science - Abstract
DEAD-box protein 6 (DDX6) is a member of the DDX RNA helicase family that exists in all eukaryotes. It has been extensively studied in yeast and mammals and has been shown to be involved in messenger ribonucleoprotein assembly, mRNA storage, and decay, as well as in miRNA-mediated gene silencing. DDX6 participates in many developmental processes but the biological function of DDX6 in insects has not yet been adequately addressed. Herein, we characterized the LmDDX6 gene that encodes the LmDDX6 protein in Locusta migratoria, a global, destructive pest. LmDDX6 possesses five motifs unique to the DDX6 subfamily. In the phylogenetic tree, LmDDX6 was closely related to its orthologs in Apis dorsata and Zootermopsis nevadensis. RT-qPCR data revealed high expression of LmDDX6 in the ovary, muscle, and fat body, with a declining trend in the ovary after adult ecdysis. LmDDX6 knockdown downregulated the expression levels of the juvenile hormone receptor Met, and genes encoding Met downstream targeted Grp78-1 and Grp78-2, reduced LmVg expression, and impaired ovary development and oocyte maturation. These results demonstrate that LmDDX6 plays an essential role in locust female reproduction and, thus, could be a novel target for locust biological control.
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- 2021
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13. Associations between Dietary Patterns and Cardiometabolic Risks in Japan: A Cross-Sectional Study from the Fukushima Health Management Survey, 2011–2015
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Enbo Ma, Tetsuya Ohira, Akira Sakai, Seiji Yasumura, Atsushi Takahashi, Junichiro Kazama, Michio Shimabukuro, Hironori Nakano, Kanako Okazaki, Masaharu Maeda, Hirooki Yabe, Yuriko Suzuki, and Kenji Kamiya
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dietary pattern ,food frequency questionnaire ,cardiometabolic risk ,fukushima health management survey ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Cardiometabolic risks were increasing in Fukushima residents after the Great East Japan Earthquake. We examined the association between dietary patterns and cardiometabolic risks in those aged ≥16 years. Dietary patterns were derived by principal component analysis for participants who underwent at least one diet assessment using a short-form food frequency questionnaire during 2011−2013 and a health checkup in 2014 and 2015 (n = 15,409 and 14,999, respectively). In 2014, the adjusted prevalence ratio (PR) and 95% confidence interval (CI) in the highest versus lowest quartile of accumulative mean scores were 0.97 (0.96−0.99) for overweight/obesity, 0.96 (0.95−0.97) for total cholesterol (TC) ≥ 220 mg/dL, 0.96 (0.95−0.98) for low-density lipoprotein cholesterol (LDL-C) ≥ 140 mg/dL, and 0.97 (0.96−0.99) for triglycerides ≥ 150 mg/dL for a vegetable diet and 1.03 (1.01−1.04) for TC ≥ 220 mg/dL and 1.02 (1.01−1.04) for LDL-C ≥ 140 mg/dL for a juice/milk diet. In 2015, we found consistently significant associations for the vegetable and juice/milk diets, and the PR and 95% CI were 0.99 (0.98−1.00) for HDL-C < 40 mg/dL for a meat diet. The continuous promotion of the vegetable pattern diet is necessary to reduce cardiometabolic risks, particularly dyslipidemia, in Japan.
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- 2020
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14. First-trimester fetal growth restriction and the occurrence of miscarriage in rural Bangladesh: A prospective cohort study.
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Harunor Rashid, Enbo Ma, Farzana Ferdous, Eva-Charlotte Ekström, and Yukiko Wagatsuma
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Medicine ,Science - Abstract
Fetal growth restriction in early pregnancy increases the risk of adverse pregnancy outcome, which has a significant social and psychological impact on women. There is limited information related to community-based study to evaluate early indicators related to miscarriage. The aim of this study is to examine the relationship between fetal growth restriction, measured by ultrasound crown-rump length (CRL), and subsequent occurrence of miscarriage in pregnant women in rural Bangladesh. The study was conducted within the Maternal and Infant Nutrition Interventions Trial in Matlab (MINIMat study), Bangladesh. A total of 4436 pregnant women were enrolled in the study when they were at less than 14 gestational weeks. The expected CRL was determined based on an established growth curve of gestational age and CRL, and deviation from this curve of CRL was expressed as a z-score. After identifying related covariates, the multiple Poisson regression model was used to determine the independent contribution from the CRL to miscarriage. A total of 3058 singleton pregnant women were included in analyses, with 92 miscarriages and 2966 continued pregnancies. The occurrence of miscarriages was significantly higher in the smaller categories of CRL z-score after adjustments for maternal age, parity, early pregnancy BMI, gestational age at CRL measurement and socioeconomic status (adjusted relative risk [95% confidence interval]: 1.03 [1.02-1.05] for less than -2 z-score). In a rural Bangladesh population, smaller than expected CRL for the gestational age was related to subsequent miscarriage. Ultrasound biometry information together with careful clinical assessment should provide much needed attention and care for pregnant women.
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- 2017
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15. Molecular Cloning and mRNA Expression of Heat Shock Protein Genes and Their Response to Cadmium Stress in the Grasshopper Oxya chinensis.
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Yuping Zhang, Yaoming Liu, Jianzhen Zhang, Yaping Guo, and Enbo Ma
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Medicine ,Science - Abstract
Heat shock proteins (Hsps) are highly conserved molecular chaperones that are synthesized in response to stress. In this study, we cloned the full-length sequences of the Grp78 (glucose-regulated protein 78), Hsp70, Hsp90, and Hsp40 genes from the Chinese rice grasshopper Oxya chinensis. The full-length cDNA sequences of OcGrp78, OcHsp70, OcHsp90, and OcHsp40 contain open reading frames of 1947, 1920, 2172, and 1042 bp that encode proteins of 649, 640, 724, and 347 amino acids, respectively. Fluorescent real-time quantitative PCR (RT-qPCR) was performed to quantify the relative transcript levels of these Hsp genes in different tissues and developmental stages. The mRNAs encoding these four Hsp genes were present at all developmental stages and in all tissues examined but were expressed at varying levels. Additionally, we investigated the mRNA expression profiles of these four Hsps in O. chinensis subjected to Cadmium (Cd) stress. OcGrp78, OcHsp70, OcHsp90, and OcHsp40 mRNA expression was induced under acute Cd stress; the levels reached a maximum within a short time (6 h), were reduced significantly at 12 h, and were lowered to or below control levels by 48 h. Regarding induction efficiency, OcHsp70 was the most sensitive gene to acute Cd stress. Chronic Cd exposure showed that dietary Cd treatment induced increased OcGrp78, OcHsp90, and OcHsp40 expression. However, dietary Cd induced a significant reduction of OcHsp70 expression. In the period tested, no significant difference in the mortality of the grasshoppers was observed. Our results suggest that these four Hsps genes, especially OcHsp70, are sensitive to acute Cd stress and could be used as molecular markers for toxicology studies. However, our results also indicate that OcHsp70 is not suitable for use as a molecular marker of chronic Cd contamination.
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- 2015
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16. Molecular basis for antioxidant enzymes in mediating copper detoxification in the nematode Caenorhabditis elegans.
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Shaojuan Song, Xueyao Zhang, Haihua Wu, Yan Han, Jianzhen Zhang, Enbo Ma, and Yaping Guo
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Medicine ,Science - Abstract
Antioxidant enzymes play a major role in defending against oxidative damage by copper. However, few studies have been performed to determine which antioxidant enzymes respond to and are necessary for copper detoxification. In this study, we examined both the activities and mRNA levels of SOD, CAT, and GPX under excessive copper stress in Caenorhabditis elegans, which is a powerful model for toxicity studies. Then, taking advantage of the genetics of this model, we assessed the lethal concentration (LC50) values of copper for related mutant strains. The results showed that the SOD, CAT, and GPX activities were significantly greater in treated groups than in controls. The mRNA levels of sod-3, sod-5, ctl-1, ctl-2, and almost all gpx genes were also significantly greater in treated groups than in controls. Among tested mutants, the sod-5, ctl-1, gpx-3, gpx-4, and gpx-6 variants exhibited hypersensitivity to copper. The strains with SOD or CAT over expression were reduced sensitive to copper. Mutations in daf-2 and age-1, which are involved in the insulin/insulin-like growth factor-1 signaling pathway, result in reduced sensitivity to stress. Here, we showed that LC50 values for copper in daf-2 and age-1 mutants were significantly greater than in N2 worms. However, the LC50 values in daf-16;daf-2 and daf-16;age-1 mutants were significantly reduced than in daf-2 and age-1 mutants, implying that reduced copper sensitivity is influenced by DAF-16-related functioning. SOD, CAT, and GPX activities and the mRNA levels of the associated copper responsive genes were significantly increased in daf-2 and age-1 mutants compared to N2. Additionally, the activities of SOD, CAT, and GPX were greater in these mutants than in N2 when treated with copper. Our results not only support the theory that antioxidant enzymes play an important role in copper detoxification but also identify the response and the genes involved in these processes.
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- 2014
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17. Two metallothionein genes in Oxya chinensis: molecular characteristics, expression patterns and roles in heavy metal stress.
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Yaoming Liu, Haihua Wu, Lihua Kou, Xiaojian Liu, Jianzhen Zhang, Yaping Guo, and Enbo Ma
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Medicine ,Science - Abstract
Metallothioneins (MTs) are small, cysteine-rich, heavy metal-binding proteins involved in metal homeostasis and detoxification in living organisms. In the present study, we cloned two MT genes (OcMT1 and OcMT2) from Oxya chinensis, analyzed the expression patterns of the OcMT transcripts in different tissues and at varying developmental stages using real-time quantitative PCR (RT-qPCR), evaluated the functions of these two MTs using RNAi and recombinant proteins in an E. coli expression system. The full-length cDNAs of OcMT1 and OcMT2 encoded 40 and 64 amino acid residues, respectively. We found Cys-Cys, Cys-X-Cys and Cys-X-Y-Z-Cys motifs in OcMT1 and OcMT2. These motifs might serve as primary chelating sites, as in other organisms. These characteristics suggest that OcMT1 and OcMT2 may be involved in heavy metal detoxification by capturing the metals. Two OcMT were expressed at all developmental stages, and the highest levels were found in the eggs. Both transcripts were expressed in all eleven tissues examined, with the highest levels observed in the brain and optic lobes, followed by the fat body. The expression of OcMT2 was also relatively high in the ovaries. The functions of OcMT1 and OcMT2 were explored using RNA interference (RNAi) and different concentrations and treatment times for the three heavy metals. Our results indicated that mortality increased significantly from 8.5% to 16.7%, and this increase was both time- and dose-dependent. To evaluate the abilities of these two MT proteins to confer heavy metal tolerance to E. coli, the bacterial cells were transformed with pET-28a plasmids containing the OcMT genes. The optical densities of both the MT-expressing and control cells decreased with increasing concentrations of CdCl2. Nevertheless, the survival rates of the MT-overexpressing cells were higher than those of the controls. Our results suggest that these two genes play important roles in heavy metal detoxification in O. chinensis.
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- 2014
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18. Molecular and functional characterization of cDNAs putatively encoding carboxylesterases from the migratory locust, Locusta migratoria.
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Jianqin Zhang, Daqi Li, Pingting Ge, Yaping Guo, Kun Yan Zhu, Enbo Ma, and Jianzhen Zhang
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Medicine ,Science - Abstract
Carboxylesterases (CarEs) belong to a superfamily of metabolic enzymes encoded by a number of genes and are widely distributed in microbes, plants and animals including insects. These enzymes play important roles in detoxification of insecticides and other xenobiotics, degradation of pheromones, regulation of neurodevelopment, and control of animal development. In this study, we characterized a total of 39 full-length cDNAs putatively encoding different CarEs from the migratory locust, Locusta migratoria, one of the most severe insect pests in many regions of the world, and evaluated the role of four CarE genes in insecticide detoxification. Our phylogenetic analysis grouped the 39 CarEs into five different clades including 20 CarEs in clade A, 3 in D, 13 in E, 1 in F and 2 in I. Four CarE genes (LmCesA3, LmCesA20, LmCesD1, LmCesE1), representing three different clades (A, D and E), were selected for further analyses. The transcripts of the four genes were detectable in all the developmental stages and tissues examined. LmCesA3 and LmCesE1 were mainly expressed in the fat bodies and Malpighian tubules, whereas LmCesA20 and LmCesD1 were predominately expressed in the muscles and hemolymph, respectively. The injection of double-stranded RNA (dsRNA) synthesized from each of the four CarE genes followed by the bioassay with each of four insecticides (chlorpyrifos, malathion, carbaryl and deltamethrin) increased the nymphal mortalities by 37.2 and 28.4% in response to malathion after LmCesA20 and LmCesE1 were silenced, respectively. Thus, we proposed that both LmCesA20 and LmCesE1 played an important role in detoxification of malathion in the locust. These results are expected to help researchers reveal the characteristics of diverse CarEs and assess the risk of insecticide resistance conferred by CarEs in the locust and other insect species.
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- 2014
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19. Molecular cloning, characterization and positively selected sites of the glutathione S-transferase family from Locusta migratoria.
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Xueyao Zhang, Jianxin Wang, Min Zhang, Guohua Qin, Daqi Li, Kun Yan Zhu, Enbo Ma, and Jianzhen Zhang
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Medicine ,Science - Abstract
Glutathione S-transferases (GSTs) are multifunctional enzymes that are involved in the metabolism of endogenous and exogenous compounds and are related to insecticide resistance. The purpose of this study was to provide new information on the molecular characteristics and the positive selection of locust GSTs. Based on the transcriptome database, we sequenced 28 cytosolic GSTs and 4 microsomal GSTs from the migratory locust (Locusta migratoria). We assigned the 28 cytosolic GSTs into 6 classes--sigma, epsilon, delta, theta, omega and zeta, and the 4 microsomal GSTs into 2 subclasses--insect and MGST3. The tissue- and stage-expression patterns of the GSTs differed at the mRNA level. Further, the substrate specificities and kinetic constants of the cytosolic GSTs differed markedly at the protein level. The results of likelihood ratio tests provided strong evidence for positive selection in the delta class. The result of Bayes Empirical Bayes analysis identified 4 amino acid sites in the delta class as positive selection sites. These sites were located on the protein surface. Our findings will facilitate the elucidation of the molecular characteristics and evolutionary aspects of insect GST superfamily.
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- 2014
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20. Molecular and functional analysis of UDP-N-acetylglucosamine Pyrophosphorylases from the Migratory Locust, Locusta migratoria.
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Xiaojian Liu, Feng Li, Daqi Li, Enbo Ma, Wenqing Zhang, Kun Yan Zhu, and Jianzhen Zhang
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Medicine ,Science - Abstract
UDP-N-acetylglucosamine pyrophosphorylases (UAP) function in the formation of extracellular matrix by producing N-acetylglucosamine (GlcNAc) residues needed for chitin biosynthesis and protein glycosylation. Herein, we report two UAP cDNA's derived from two different genes (LmUAP1 and LmUAP2) in the migratory locust Locusta migratoria. Both the cDNA and their deduced amino acid sequences showed about 70% identities between the two genes. Phylogenetic analysis suggests that LmUAP1 and LmUAP2 derive from a relatively recent gene duplication event. Both LmUAP1 and LmUAP2 were widely expressed in all the major tissues besides chitin-containing tissues. However, the two genes exhibited different developmental expression patterns. High expression of LmUAP1 was detected during early embryogenesis, then decreased greatly, and slowly increased before egg hatch. During nymphal development, the highest expression of LmUAP1 appeared just after molting but declined in each inter-molting period and then increased before molting to the next stage, whereas LmUAP2 was more consistently expressed throughout all these stages. When the early second- and fifth-instar nymphs (1-day-old) were injected with LmUAP1 double-stranded RNA (dsRNA), 100% mortality was observed 2 days after the injection. When the middle second- and fifth-instar nymphs (3- to 4-day-old) were injected with LmUAP1 dsRNA, 100% mortality was observed during their next molting process. In contrast, when the insects at the same stages were injected with LmUAP2 dsRNA, these insects were able to develop normally and molt to the next stage successfully. It is presumed that the lethality caused by RNAi of LmUAP1 is due to reduced chitin biosynthesis of the integument and midgut, whereas LmUAP2 is not essential for locust development at least in nymph stage. This study is expected to help better understand different functions of UAP1 and UAP2 in the locust and other insect species.
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- 2013
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21. Characterization and functional analysis of four glutathione S-transferases from the migratory locust, Locusta migratoria.
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Guohua Qin, Miao Jia, Ting Liu, Xueyao Zhang, Yaping Guo, Kun Yan Zhu, Enbo Ma, and Jianzhen Zhang
- Subjects
Medicine ,Science - Abstract
Glutathione S-transferases (GSTs) play an important role in detoxification of xenobiotics in both prokaryotic and eukaryotic cells. In this study, four GSTs (LmGSTd1, LmGSTs5, LmGSTt1, and LmGSTu1) representing different classes were identified from the migratory locust, Locusta migratoria. These four proteins were heterologously expressed in Escherichia coli as soluble fusion proteins, purified by Ni(2+)-nitrilotriacetic acid agarose column and biochemically characterized. LmGSTd1, LmGSTs5, and LmGSTu1 showed high activities with 1-chloro-2, 4-dinitrobenzene (CDNB), detectable activity with p-nitro-benzyl chloride (p-NBC) and 1, 2-dichloro-4-nitrobenzene (DCNB), whereas LmGSTt1 showed high activity with p-NBC and detectable activity with CDNB. The optimal pH of the locust GSTs ranged between 7.0 to 9.0. Ethacrynic acid and reactive blue effectively inhibited all four GSTs. LmGSTs5 was most sensitive to heavy metals (Cu(2+) and Cd(2+)). The maximum expression of the four GSTs was observed in Malpighian tubules and fat bodies as evaluated by western blot. The nymph mortalities after carbaryl treatment increased by 28 and 12% after LmGSTs5 and LmGSTu1 were silenced, respectively. The nymph mortalities after malathion and chlorpyrifos treatments increased by 26 and 18% after LmGSTs5 and LmGSTu1 were silenced, respectively. These results suggest that sigma GSTs in L. migratoria play a significant role in carbaryl detoxification, whereas some of other GSTs may also involve in the detoxification of carbaryl and chlorpyrifos.
- Published
- 2013
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22. RNA-programmed genome editing in human cells
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Martin Jinek, Alexandra East, Aaron Cheng, Steven Lin, Enbo Ma, and Jennifer Doudna
- Subjects
Cas9 ,endonuclease ,genome editing ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Type II CRISPR immune systems in bacteria use a dual RNA-guided DNA endonuclease, Cas9, to cleave foreign DNA at specific sites. We show here that Cas9 assembles with hybrid guide RNAs in human cells and can induce the formation of double-strand DNA breaks (DSBs) at a site complementary to the guide RNA sequence in genomic DNA. This cleavage activity requires both Cas9 and the complementary binding of the guide RNA. Experiments using extracts from transfected cells show that RNA expression and/or assembly into Cas9 is the limiting factor for Cas9-mediated DNA cleavage. In addition, we find that extension of the RNA sequence at the 3′ end enhances DNA targeting activity in vivo. These results show that RNA-programmed genome editing is a facile strategy for introducing site-specific genetic changes in human cells.
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- 2013
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23. Comparative genomic analysis of chitinase and chitinase-like genes in the African malaria mosquito (Anopheles gambiae).
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Jianzhen Zhang, Xin Zhang, Yasuyuki Arakane, Subbaratnam Muthukrishnan, Karl J Kramer, Enbo Ma, and Kun Yan Zhu
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Medicine ,Science - Abstract
Chitinase is an important enzyme responsible for chitin metabolism in a wide range of organisms including bacteria, yeasts and other fungi, nematodes and arthropods. However, current knowledge on chitinolytic enzymes, especially their structures, functions and regulation is very limited. In this study we have identified 20 chitinase and chitinase-like genes in the African malaria mosquito, Anopheles gambiae, through genome-wide searching and transcript profiling. We assigned these genes into eight different chitinase groupings (groups I-VIII). Domain analysis of their predicted proteins showed that all contained at least one catalytic domain. However, only seven (AgCht4, AgCht5-1, AgCht6, AgCht7, AgCht8, AgCht10 and AgCht23) displayed one or more chitin-binding domains. Analyses of stage- and tissue-specific gene expression revealed that most of these genes were expressed in larval stages. However, AgCht8 was mainly expressed in the pupal and adult stages. AgCht2 and AgCht12 were specifically expressed in the foregut, whereas AgCht13 was only expressed in the midgut. The high diversity and complexity of An. gambiae chitinase and chitinase-like genes suggest their diverse functions during different developmental stages and in different tissues of the insect. A comparative genomic analysis of these genes along with those present in Drosophila melanogaster, Tribolium castaneum and several other insect species led to a uniform classification and nomenclature of these genes. Our investigation also provided important information for conducting future studies on the functions of chitinase and chitinase-like genes in this important malaria vector and other species of arthropods.
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- 2011
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24. Circulating Inflammation Markers and Pancreatic Cancer Risk: A Prospective Case-Cohort Study in Japan
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Taichi Shimazu, Hadrien Charvat, Ruth M. Pfeiffer, Ligia A. Pinto, Manami Inoue, Troy J. Kemp, Enbo Ma, Minkyo Song, Charles S. Rabkin, Norie Sawada, Taiki Yamaji, M. Constanza Camargo, and Shoichiro Tsugane
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Adult ,Male ,Oncology ,medicine.medical_specialty ,Epidemiology ,CCL8 ,Article ,Japan ,Surveys and Questionnaires ,Internal medicine ,Pancreatic cancer ,Biomarkers, Tumor ,medicine ,Humans ,Prospective Studies ,Prospective cohort study ,Aged ,Inflammation ,business.industry ,Proportional hazards model ,Confounding ,Middle Aged ,medicine.disease ,Confidence interval ,Pancreatic Neoplasms ,Cohort ,Cytokines ,Intercellular Signaling Peptides and Proteins ,Female ,Chemokines ,business ,Cohort study - Abstract
Background: Previous prospective studies of associations between circulating inflammation-related molecules and pancreatic cancer risk have included limited numbers of markers. Methods: We conducted a case–cohort study nested within the Japan Public Health Center-based Prospective Study Cohort II. We selected a random subcohort (n = 774) from a total of 23,335 participants aged 40 to 69 years who returned a questionnaire and provided blood samples at baseline. During the follow-up period from 1993 to 2010, we identified 111 newly diagnosed pancreatic cancer cases, including one case within the subcohort. Plasma concentrations of 62 inflammatory markers of chemokines, cytokines, and growth factors were measured by a Luminex fluorescent bead-based assay. Cox regression models were applied to estimate HR and 95% confidence intervals (CI) for pancreatic cancer risk for quartiles of marker levels adjusted for potential confounders. Results: The HR (95% CI) for the highest versus the lowest category of C–C motif ligand chemokine 8/monocyte chemoattractant protein 2 (CCL8/MCP2) was 2.03 (1.05–3.93; Ptrend = 0.048). After we corrected for multiple comparisons, none of the examined biomarkers were associated with pancreatic cancer risk at P-value Conclusions: We found no significant associations between 62 inflammatory markers and pancreatic cancer risk. Impact: The suggestive association with circulating levels of leukocyte recruiting cytokine CCL8/MCP2 may warrant further investigation.
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- 2022
25. Four alternative splicing transcripts of intracellular copper/zinc superoxide dismutase 1 in Oxya chinensis
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Enbo Ma, Haihua Wu, Xueyao Zhang, Xuhan Zhang, Jianzhen Zhang, and Jing Liu
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Arginine ,chemistry.chemical_element ,Grasshoppers ,Zinc ,medicine.disease_cause ,Biochemistry ,Antioxidants ,Conserved sequence ,Superoxide dismutase ,Superoxide Dismutase-1 ,Structural Biology ,medicine ,Animals ,Amino Acid Sequence ,Molecular Biology ,Binding Sites ,biology ,Alternative splicing ,Active site ,General Medicine ,Alternative Splicing ,chemistry ,biology.protein ,Sequence Alignment ,Copper ,Intracellular ,Oxidative stress - Abstract
In this study, we obtained four alternative splicing transcripts of intracellular copper/zinc superoxide dismutase 1 (icCuZnSOD1) in Oxya chinensis. OcicCuZnSOD1a has all common characteristics of CuZnSOD family and is a canonical CuZnSOD. OcicCuZnSOD1b is missing a Zn binding site. OcicCuZnSOD1c lacks Zn ion and is a Cu-only SOD. OcicCuZnSOD1d is missing a CuZnSOD conserved sequence and lacks the E-loop, a conserved disulfide bond, and an active site arginine. OcicCuZnSOD1a was the most heat-resistant and OcicCuZnSOD1c was the most unstable at high temperatures above 55 °C. They were stable at a wide pH range, especially in alkaline conditions. The four variants expressed at the throughout developmental stages and had various tissue expression patterns. OcicCuZnSOD1a and OcicCuZnSOD1d were significantly induced by 8.79 mM CuCl2 and OcicCuZnSOD1b was significantly up-regulated by 14.67 mM CuCl2. OcicCuZnSOD1a was significantly inhibited by 19.13 mM ZnSO4 while OcicCuZnSOD1d were significantly induced by 22.61 mM ZnSO4. Disc diffusion assay showed that the four isoforms of OcicCuZnSOD1 made the killing zones smaller surrounding the CdCl2-soaked filter discs. However, the reduction ratios of OcicCuZnSOD1a were the highest. These results implied that the four transcripts played roles in defense against CdCl2-induced oxidative stress while OcicCuZnSOD1a had stronger antioxidant capacity.
- Published
- 2021
26. Improved genome editing by an engineered CRISPR-Cas12a
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Enbo Ma, Kai Chen, Honglue Shi, Elizabeth C Stahl, Ben Adler, Marena Trinidad, Junjie Liu, Kaihong Zhou, Jinjuan Ye, and Jennifer A Doudna
- Subjects
Genetics - Abstract
CRISPR-Cas12a is an RNA-guided, programmable genome editing enzyme found within bacterial adaptive immune pathways. Unlike CRISPR-Cas9, Cas12a uses only a single catalytic site to both cleave target double-stranded DNA (dsDNA) (cis-activity) and indiscriminately degrade single-stranded DNA (ssDNA) (trans-activity). To investigate how the relative potency of cis- versus trans-DNase activity affects Cas12a-mediated genome editing, we first used structure-guided engineering to generate variants of Lachnospiraceae bacterium Cas12a that selectively disrupt trans-activity. The resulting engineered mutant with the biggest differential between cis- and trans-DNase activity in vitro showed minimal genome editing activity in human cells, motivating a second set of experiments using directed evolution to generate additional mutants with robust genome editing activity. Notably, these engineered and evolved mutants had enhanced ability to induce homology-directed repair (HDR) editing by 2–18-fold compared to wild-type Cas12a when using HDR donors containing mismatches with crRNA at the PAM-distal region. Finally, a site-specific reversion mutation produced improved Cas12a (iCas12a) variants with superior genome editing efficiency at genomic sites that are difficult to edit using wild-type Cas12a. This strategy establishes a pipeline for creating improved genome editing tools by combining structural insights with randomization and selection. The available structures of other CRISPR-Cas enzymes will enable this strategy to be applied to improve the efficacy of other genome-editing proteins.
- Published
- 2022
27. Development of a Japanese Healthy Diet Index: The Fukushima Health Management Survey 2011
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Enbo Ma, Tetsuya Ohira, Seiji Yasumura, Mitsuaki Hosoya, Makoto Miyazaki, Kanako Okazaki, Masanori Nagao, Fumikazu Hayashi, Hironori Nakano, Eri Eguchi, Narumi Funakubo, Michio Shimabukuro, Hirooki Yabe, Masaharu Maeda, Hitoshi Ohto, and Kenji Kamiya
- Subjects
Male ,Japan ,Food ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Humans ,Female ,Diet, Healthy ,healthy diet index ,dietary pattern ,food frequency questionnaire ,Fukushima health management survey ,Health Surveys ,Diet - Abstract
A novel healthy diet index for dietary quality can be used to assess food intake. After the Great East Japan Earthquake in 2011, the Fukushima Health Management Survey collected dietary data using a short-form food frequency questionnaire (FFQ). The current study included eligible participants (n = 64,909) aged 16–84 years who answered the FFQ in 2011. The year- and sex-specific dietary patterns were determined via principal component analysis. Based on the typical Japanese, juice/dairy, and meat patterns, healthy diet index (HDI) scores were assigned for food items, resulting in Spearman’s correlation coefficients of 0.730, −0.227, and −0.257, respectively. The mean (standard deviation) of the HDI scores (range: 1–18) were 9.89 (2.68) in men and 9.96 (2.58) in women. Older individuals, women, nonsmokers, those in good health and with regular physical exercise, and those who did not transfer residences had a high HDI score. In the confirmatory analysis, the adjusted odds ratio (95% confidence interval) of the highest vs. the lowest quartiles of HDI scores was 0.87 (0.80, 0.94) for overweight, 0.89 (0.81, 0.97) for large waist circumference, and 0.73 (0.66, 0.80) for dyslipidemia. The HDI score obtained using the FFQ can be applied to evaluate dietary profiles.
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- 2022
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28. The Association Between Pediatric Asthma and Missed School Days: A Sex-Stratified Secondary Analysis From the Indonesian Family Life Survey
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Nirmin F. Juber, Mduduzi C. Shongwe, Enbo Ma, Wen-Shu Lin, and Tuan-Hung Ngo
- Subjects
Public Health, Environmental and Occupational Health - Published
- 2022
29. Effects of zolpidem administration on postoperative pain in patients after total knee arthroplasty: Study protocol for a randomized controlled trial
- Author
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Takeo Mammoto, Noriko Taguchi, Shunji Takei, Yoshiyuki Imoo, and Enbo Ma
- Published
- 2022
30. The microRNA miR‐184 regulates the CYP303A1 transcript level to control molting of Locusta migratoria
- Author
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Yan-Li Wang, Jianzhen Zhang, Hui-Yong Li, Kun Yan Zhu, Lixian Wu, Xue-Qin Wen, and Enbo Ma
- Subjects
0106 biological sciences ,0301 basic medicine ,Locusta migratoria ,Molting ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,chemistry.chemical_compound ,Cytochrome P-450 Enzyme System ,Downregulation and upregulation ,microRNA ,Animals ,Drosophila Proteins ,Gene silencing ,Antagomir ,Ecology, Evolution, Behavior and Systematics ,Regulation of gene expression ,biology ,fungi ,Gene Expression Regulation, Developmental ,Cytochrome P450 ,biology.organism_classification ,Phenotype ,Cell biology ,MicroRNAs ,010602 entomology ,Drosophila melanogaster ,030104 developmental biology ,chemistry ,Insect Science ,biology.protein ,Agronomy and Crop Science - Abstract
Cytochrome P450 monooxygenases (CYPs) play essential physiological functions in insects. CYP303A1 is highly conserved in insect species studied to date, and shows an indispensable role for adult eclosion in both Locusta migratoria and Drosophila melanogaster. However, how CYP303A1 is regulated to control insect developmental process remains uninvestigated. In this study, we discovered functional binding sites for miR-184 in the coding sequence of LmCYP303A1. The luciferase reporter assay showed that miR-184 could target LmCYP303A1 and regulate its expression in vitro. Furthermore, overexpression of miR-184 through microinjection of agomir to locusts reduced the transcripts of LmCYP303A1 and led to the abnormal molting, which is similar to the phenotype of silencing LmCYP303A1 by direct injection of dsLmCYP303A1 to locusts. Meanwhile, down regulation of miR-184 by injection of antagomir increased the LmCYP303A1 transcript and caused molting defects. These findings suggested that miR-184 could target LmCYP303A1 to regulate the molting process in L. migratoria, which might be considered as a novel target for pest control. This article is protected by copyright. All rights reserved.
- Published
- 2020
31. Effect of <scp>RNAi</scp> ‐mediated silencing of two Knickkopf family genes ( <scp> LmKnk2 </scp> and <scp> LmKnk3 </scp> ) on cuticle formation and insecticide susceptibility in Locusta migratoria
- Author
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Xiaojian Liu, Xueyao Zhang, Rongrong Yu, Rui Zhang, Enbo Ma, Kun Yan Zhu, Jianzhen Zhang, Bernard Moussian, and Xiaoming Zhao
- Subjects
0106 biological sciences ,Gene knockdown ,biology ,media_common.quotation_subject ,Cuticle ,fungi ,Arthropod cuticle ,General Medicine ,Migratory locust ,Insect ,biology.organism_classification ,01 natural sciences ,Cell biology ,010602 entomology ,RNA interference ,Insect Science ,Gene silencing ,Agronomy and Crop Science ,Gene ,010606 plant biology & botany ,media_common - Abstract
BACKGROUND Knickkopf (Knk) proteins play crucial roles in the formation of insect cuticle. Recent studies in the holometabolous insect red flour beetle (Tribolium castaneum) have shown that three Knk genes encoding TcKnk, TcKnk2 and TcKnk3 play different but essential roles at different developmental stages and in different tissues. However, the functions of Knk genes had not been fully explored in hemimetabolous insects such as the migratory locust Locusta migratoria. RESULTS We identified three transcripts of LmKnk-like genes LmKnk2 and LmKnk3 with the full-length cDNA sequences, which were named as LmKnk2, LmKnk3-FL and LmKnk3-5'. These three transcripts were highly expressed before molting and mainly expressed in the integument. Among these genes, silencing only LmKnk3-5' by RNA interference (RNAi) caused molting defects and high mortality of the locusts. Injection of dsLmKnk3-5' dramatically decreased chitin content, but did not affect cuticle laminar ultra-structures in the integument. After the knockdown of LmKnk3-5' transcript, lipid deposition on the cuticle surface was impeded, and locusts exhibited increased susceptibility to each of four insecticides in three different classes. However, no visible phenotypic changes were observed after LmKnk2 or LmKnk3-FL was silenced by RNAi. CONCLUSION We demonstrate that LmKnk3-5' is essential for cuticle formation in L. migratoria. This contrasts the findings that the cognate protein in T. castaneum TcKnk3-5' is dispensable for cuticle formation and survival. Hence, we provide some evidence that the function of Knk-type proteins may be species-specific. We therefore think that LmKnk3-5' may be a good target for the application of RNAi-based technologies for species-specific insect pest management. © 2020 Society of Chemical Industry.
- Published
- 2020
32. Dietary pattern changes in Fukushima residents after the Great East Japan Earthquake: the Fukushima Health Management Survey 2011–2013
- Author
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Hironori Nakano, Tetsuya Ohira, Akira Sakai, Enbo Ma, Seiji Yasumura, Kenji Kamiya, Masaharu Maeda, and Hirooki Yabe
- Subjects
Male ,Food frequency questionnaire ,media_common.quotation_subject ,Principal component analysis ,Dietary pattern ,Medicine (miscellaneous) ,Fukushima Health Management Survey ,Food group ,Promotion (rank) ,Japan ,Environmental health ,Earthquakes ,Fukushima Nuclear Accident ,Humans ,Evacuee ,Medicine ,Eating behaviour ,media_common ,Nutrition and Dietetics ,Health management system ,business.industry ,Public Health, Environmental and Occupational Health ,Health Surveys ,Diet ,Female ,business ,Research Paper - Abstract
Objective: Dietary patterns more closely resemble actual eating behaviours because multiple food groups, not a single food group or nutrient, are considered. The present study aimed to identify and assess changes of dietary patterns in Fukushima residents. Design: Dietary data were collected using a short-form FFQ in annual Fukushima Health Management Survey between 2011 and 2013 after the Great East Japan Earthquake. Year- and sex-specific dietary patterns were determined by the principal component analysis. Setting: Evacuation and nonevacuation zones in Fukushima, Japan. Participants: Eligible participants aged ≥16 years answered the FFQ (n 67 358 in 2011, n 48 377 in 2012 and n 40 742 in 2013). Results: Three identified dietary patterns were assessed similarly in men and women and among years: typical, juice and meat. In total participants, the Spearman’s correlation coefficients between two survey years were 0·70–0·74 for the typical, 0·58–0·66 for the juice and 0·50–0·54 for the meat pattern scores. Adjusted for sociodemographic factors, evacuees had lower typical pattern scores, higher juice pattern scores and the same meat pattern scores compared with non-evacuees. The means of typical pattern scores in evacuees and it of juice pattern scores in non-evacuees continued declining over years. Similar profiles of dietary patterns and trends of pattern scores were observed in participants (n 22 805) who had provided three dietary assessments. Conclusions: Changes of dietary patterns have been observed between 2011 and 2013. Careful investigation of those with low intake of typical pattern foods and promotion of them, particularly in evacuees, are needed.
- Published
- 2020
33. Both LmDicer-1 and two LmDicer-2s participate in siRNA-mediated RNAi pathway and contribute to high gene silencing efficiency in Locusta migratoria
- Author
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Lu Gao, Yanli Wang, Mureed Abbas, Tingting Zhang, Enbo Ma, Hans Merzendorfer, Kun Yan Zhu, and Jianzhen Zhang
- Subjects
MicroRNAs ,Tubulin ,Tandem Mass Spectrometry ,Insect Science ,Animals ,Locusta migratoria ,RNA Interference ,RNA, Small Interfering ,Molecular Biology ,Biochemistry ,RNA, Double-Stranded ,Chromatography, Liquid - Abstract
Dicers belong to a class of large RNase III multidomain ribonucleases and are central components of the RNA interference (RNAi) pathways. In insects, Dicer-2 has been known to cleave long double-stranded RNA (dsRNA) in small interfering RNA (siRNA)-mediated-RNAi pathway. However, Dicer-1 is responsible for cleaving precursor microRNAs (pre28 miRNAs) in miRNA-mediated RNAi pathway. In this study, we identified one LmDicer-1 and two LmDicer-2 (LmDicer-2a and LmDicer-2b) genes in Locusta migratoria. The RNAi of RNAi assay showed that knockdown of each of the Dicer genes reduced RNAi efficiency against a target gene (Lmβ-Tubulin), suggesting that all these genes participated in the siRNA-mediated RNAi pathway. Sequence analyses of the siRNAs generated from dsLmβ-Tubulin after silencing each LmDicer gene showed no significant difference in the pattern of siRNAs mapped to dsLmβ-Tubulin. This result indicated that all the three LmDicers are capable of generating siRNAs from the dsRNA. We then generated recombinant proteins consisting of different domains using Escherichia coli expression system and incubated each recombinant protein with dsLmβ-Tubulin. We found that the recombinant Dicer proteins successfully cleaved dsLmβ-Tubulin. However, LmDicer-2a-R lacking dsRBD domain lost activity, suggesting that dsRBD domain is critical for Dicer function. Furthermore, overexpression of these proteins in Drosophila S2 cells improved RNAi efficiency. Our siRNA affinity chromatography and LC-MS/MS analysis identified LmDicer-2a, LmDicer-2b, LmR2D2, LmAgo2a, LmAgo1, LmStaufen and LmTARBP2 as constituents of RNA-induced silencing complex. Taken together, these data show that both LmDicer-1 and two LmDicer-2s all participate in siRNA-mediated RNAi pathway and likely contribute to high RNAi efficiency in L. migratoria.
- Published
- 2022
34. Complete mitochondrial genome of two Thitarodes species (Lepidoptera, Hepialidae), the host moths of Ophiocordyceps sinensis and phylogenetic implications
- Author
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Xueyao Zhang, Yang Zhong, Tao Li, Tingting Zhang, Zhi‐Mei Gao, Jie Yin, Enbo Ma, Dongwei Yuan, Zhumei Ren, and Min Zhang
- Subjects
Mitochondrial DNA ,Hepialidae ,Ophiocordyceps sinensis ,Genes, Insect ,02 engineering and technology ,Biochemistry ,Genome ,Open Reading Frames ,03 medical and health sciences ,Ascomycota ,Structural Biology ,Phylogenetics ,Genus ,Animals ,Codon ,Molecular Biology ,Phylogeny ,030304 developmental biology ,Thitarodes ,Base Composition ,0303 health sciences ,biology ,Phylogenetic tree ,Computational Biology ,Molecular Sequence Annotation ,Genomics ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Lepidoptera ,Evolutionary biology ,Genome, Mitochondrial ,0210 nano-technology - Abstract
Thitarodes (Lepidoptera, Hepialidae) is the only genus that hosts to the Ophiocordyceps sinensis, a traditional Chinese medicine considered as a powerful medicinal supplement. In this study, the complete mitochondrial genomes (mitogenomes) of two species, T. damxungensis and T. pui, have been sequenced, which are 15,928 bp and 15,362 bp in size respectively, and both contain 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and an AT-rich region. Like other hepialoids, the gene arrangement of the mitogenomes of T. damxungensis and T. pui is identical to the ancestral arrangement but differs from those of other lepidopteran species on account of the different arrangements of trnM, trnI, and trnQ. The size of AT-rich region is 545 bp in T. damxungensis and 1030 bp in T. pui. Tandem repetition in the AT-rich region is responsible for the length difference of the A + T-rich region in both species. In Hepialidae, the phylogenetic study based on the dataset of the sequences that combined the protein-coding genes and RNA genes suggested that the species T. yunnanensis should still belong to the genus Thitarodes rather than Ahamns, which is different from the results based on the traditional phylogeny.
- Published
- 2019
35. Aryl hydrocarbon receptor regulates the expression ofLmGSTd7and is associated with chlorpyrifos susceptibility inLocusta migratoria
- Author
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Tingting Zhang, Dong Jie, Jiao Liu, Jianzhen Zhang, Enbo Ma, Jianqin Zhang, and Xueyao Zhang
- Subjects
Nymph ,0106 biological sciences ,Insecticides ,Aryl hydrocarbon receptor nuclear translocator ,Grasshoppers ,Biology ,01 natural sciences ,Insecticide Resistance ,RNA interference ,Transcription (biology) ,Gene expression ,Animals ,Gene ,Transcription factor ,Glutathione Transferase ,General Medicine ,Aryl hydrocarbon receptor ,Molecular biology ,010602 entomology ,Glutathione S-transferase ,Gene Expression Regulation ,Receptors, Aryl Hydrocarbon ,Insect Science ,biology.protein ,Insect Proteins ,Chlorpyrifos ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
Background The aryl hydrocarbon receptor (AhR) belongs to the bHLH-PAS (basic Helix-Loop-Helix - Period/ARNT/Single minded) family of transcription factors. AhR is a ligand-activated transcription factor, which participates in the sensing and transmitting stimuli of endogenous and exogenous chemicals, and subsequently activates the transcription of genes related to various physiological and detoxification functions. Result In this study, a single full-length LmAhR sequence was cloned and characterized. RNA interference (RNAi) and insecticide bioassays showed that LmAhR plays a vital role in chlorpyrifos susceptibility. To better identify aryl hydrocarbon receptor from locusta migratoria (LmAhR)-regulated genes involved in chlorpyrifos susceptibility, a comparative transcriptome analysis was performed using double-stranded (ds)GFP- and dsLmAhR-injected Locusta migratoria. Differential gene expression analysis identified 145 down-regulated and 67 up-regulated genes (P ≤ 0.05 and fold change ≥2) in dsLmAhR-knockdown insects. We selected 27 down-regulated genes and verified their expression levels using reverse transcription quantitative PCR. Finally, one glutathione S-transferase (GST) gene (LmGSTd7) was selected as a candidate detoxification gene and was further validated via RNAi and chlorpyrifos bioassays. Conclusion Our data suggest that AhR is associated with chlorpyrifos susceptibility via the regulation of LmGSTd7 expression in L. migratoria. © 2019 Society of Chemical Industry.
- Published
- 2019
36. CRISPR-CasX is an RNA-dominated enzyme active for human genome editing
- Author
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Eva Nogales, Hannah Spinner, Jonathan Chuck, Basem Al-Shayeb, Natalia Orlova, Enbo Ma, Jun-Jie Liu, Gavin J. Knott, Jennifer A. Doudna, John J Desmarais, Brett T. Staahl, Katherine Baney, Alexander J. Wagner, Julian Brötzmann, Dan Tan, Lucas B. Harrington, Benjamin L. Oakes, and Kian Taylor
- Subjects
0301 basic medicine ,Models, Molecular ,CRISPR-Associated Proteins ,Computational biology ,Biology ,Genome ,Article ,Evolution, Molecular ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Genome editing ,Protein Domains ,Escherichia coli ,Humans ,Clustered Regularly Interspaced Short Palindromic Repeats ,Guide RNA ,Gene Silencing ,DNA Cleavage ,Gene Editing ,Multidisciplinary ,Cas9 ,Genome, Human ,Cryoelectron Microscopy ,RNA ,DNA ,030104 developmental biology ,chemistry ,Nucleic acid ,Nucleic Acid Conformation ,Human genome ,CRISPR-Cas Systems ,030217 neurology & neurosurgery ,Genome, Bacterial ,RNA, Guide, Kinetoplastida - Abstract
The RNA-guided CRISPR-associated (Cas) proteins Cas9 and Cas12a provide adaptive immunity against invading nucleic acids, and function as powerful tools for genome editing in a wide range of organisms. Here we reveal the underlying mechanisms of a third, fundamentally distinct RNA-guided genome-editing platform named CRISPR-CasX, which uses unique structures for programmable double-stranded DNA binding and cleavage. Biochemical and in vivo data demonstrate that CasX is active for Escherichia coli and human genome modification. Eight cryo-electron microscopy structures of CasX in different states of assembly with its guide RNA and double-stranded DNA substrates reveal an extensive RNA scaffold and a domain required for DNA unwinding. These data demonstrate how CasX activity arose through convergent evolution to establish an enzyme family that is functionally separate from both Cas9 and Cas12a.
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- 2019
37. Antioxidant defenses at enzymatic and transcriptional levels in response to acute lead administration in Oxya chinensis
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Enbo Ma, Jianzhen Zhang, Haihua Wu, Xueyao Zhang, and Yongmei Liu
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Antioxidant ,Health, Toxicology and Mutagenesis ,medicine.medical_treatment ,0211 other engineering and technologies ,Grasshoppers ,02 engineering and technology ,010501 environmental sciences ,Pharmacology ,medicine.disease_cause ,01 natural sciences ,Antioxidants ,Superoxide dismutase ,medicine ,Animals ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Glutathione Peroxidase ,021110 strategic, defence & security studies ,biology ,Superoxide Dismutase ,Chemistry ,Glutathione peroxidase ,Public Health, Environmental and Occupational Health ,Hydrogen Peroxide ,General Medicine ,Catalase ,Pollution ,Up-Regulation ,Oxidative Stress ,Enzyme ,Lead ,Lead acetate ,Toxicity ,biology.protein ,Oxidation-Reduction ,Oxidative stress - Abstract
Lead (Pb) is known to be toxic to many organisms. Oxidative stress is a major mechanism of its toxicity. This research aims to investigate the effects of Pb on hydrogen peroxide (H2O2) and malonedialdehyde (MDA) contents, activities and mRNA levels of antioxidant enzymes (superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GPx)) after Oxya chinensis were acutely treated with lead acetate for 24 h. The results showed that the LD50-24 h value of lead acetate to O. chinensis was 1541.89 (1431.19–1655.77) μg g−1 body H2O2 and MDA contents were elevated after Pb administration, which suggested that Pb induced the overproduction of ROS and caused oxidative stress. SOD activities were significantly inhibited 40.42% of the control by 280 μg μL−1 Pb. CAT activities were increased while GPx activities had no significant changes. Different types of antioxidant-related genes had various responses to Pb stress. The transcriptions of icCuZnSOD2 and ecCuZnSOD2 were significantly inhibited by different concentrations of Pb. MnSOD mRNA levels showed the concentration-dependent rise with the Pb concentrations increase. The expressions of ecCuZnSOD1, CAT1, and GPx were significantly up-regulated while the transcriptions of icCuZnSOD1 and CAT2 had no significant changes. Alteration of activities and mRNA expressions of antioxidant enzymes implied that Pb-induced antioxidant defenses were related to modifications at enzymatic and transcriptional levels. The profiles of antioxidant enzymes and H2O2 and MDA contents and relationships among the parameters indicated that the cooperation of multiple antioxidants rather than a single factor might be responsible for the antioxidant defenses against Pb stress.
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- 2019
38. LmCDA1 organizes the cuticle by chitin deacetylation in Locusta migratoria
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R.‐ Zuber, D.‐Q. Li, Kun Yan Zhu, Bernard Moussian, Weimin Liu, R. R. Yu, Jianzhen Zhang, Xiaoming Zhao, M. Zhang, and Enbo Ma
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Nymph ,0106 biological sciences ,0301 basic medicine ,Cuticle ,Locusta migratoria ,Chitin ,Arthropod cuticle ,macromolecular substances ,Biology ,Matrix (biology) ,Polysaccharide ,01 natural sciences ,Amidohydrolases ,Extracellular matrix ,Chitosan ,03 medical and health sciences ,chemistry.chemical_compound ,Animal Shells ,Genetics ,Animals ,Amino Acid Sequence ,Molecular Biology ,Phylogeny ,chemistry.chemical_classification ,fungi ,Acetylation ,Chitin deacetylase ,Cell biology ,carbohydrates (lipids) ,010602 entomology ,030104 developmental biology ,chemistry ,Insect Science ,Insect Proteins ,Sequence Alignment - Abstract
Cells produce an extracellular matrix (ECM) with a stereotypic organization that is important for tissue function. The insect cuticle is a layered ECM that mainly consists of the polysaccharide chitin and associated proteins adopting a quasi-crystalline structure. Our understanding of the molecular mechanisms deployed during construction of the highly ordered protein-chitin ECM so far is limited. In this study, we report on the role of the chitin deacetylase 1 (LmCDA1) in the organization of the protein-chitin ECM in the migratory locust Locusta migratoria, and LmCDA1 localizes predominantly to the apical tier of the protein-chitin ECM, but it is also found in lower regions. Reduction of LmCDA1 function correlates with lower amounts of chitin and impedes conversion of chitin to chitosan by deacetylation. Establishment of the quasi-crystalline architecture of the protein-chitin ECM is, however, independent of LmCDA1 activity, but it is dependent on another chitin deacetylase, LmCDA2, which has no detectable effects on chitin deacetylation and, as shown previously, no influence on chitin content. Our data reveal that LmCDA1 and LmCDA2 act in parallel and independently from each other in defining the dimensions of the cuticle. Both enzymes are non-uniformly distributed within the protein-chitin matrix, suggesting a site-autonomous function.
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- 2018
39. Characteristics of Halloween genes and RNA interference-mediated functional analysis of LmCYP307a2 in Locusta migratoria
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Haihua Wu, Qi-Hui He, Jianzhen Zhang, Tingting Zhang, Enbo Ma, and Xueyao Zhang
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0106 biological sciences ,0301 basic medicine ,media_common.quotation_subject ,Apolysis ,Locusta migratoria ,Biology ,Molting ,01 natural sciences ,Halloween genes ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,RNA interference ,Animals ,Metamorphosis ,Ecology, Evolution, Behavior and Systematics ,media_common ,Gene knockdown ,fungi ,Prothoracic gland ,Cell biology ,010602 entomology ,030104 developmental biology ,Ecdysterone ,Insect Science ,Ecdysis ,Insect Proteins ,RNA Interference ,Agronomy and Crop Science ,Moulting - Abstract
Halloween genes are involved in the biosynthesis of the molting hormone, which plays a key role in insect ecdysis, development, metamorphosis, and reproduction. Our previous work identified five Halloween genes from Locusta migratoria, but their functions are currently unknown. In this study, the sequences of these five Halloween genes were analyzed and characterized. LmCYP307a2, LmCYP306a1, LmCYP302a1, and LmCYP315a1 were primarily expressed in the prothoracic glands, while LmCYP314a1 was universally expressed in peripheral tissues, especially in the ovaries and Malpighian tubules. All five Halloween genes were mainly expressed from the 5th to the 7th d in 5th-instar nymphs. RNA interference (RNAi) silencing of LmCYP307a2 resulted in severe molting delays and molting failure, which could be rescued by supplementary 20-hydroxyecdysone. A hematoxylin and eosin staining analysis suggested that the RNAi of LmCYP307a2 inhibited the ecdysis process by inhibiting the apolysis and degradation of the old cuticle, and by promoting the synthesis of a new cuticle. Quantitative reverse transcription polymerase chain reaction results showed that the expressions of LmE74, LmCht5, and LmCht10 were dramatically down-regulated, while that of LmChsI was substantially up-regulated, after knockdown of LmCYP307a2. The results suggest that LmCYP307a2 is related to the molt process via regulation of chitin synthesis and degradation.
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- 2021
40. Dietary Patterns and Progression of Impaired Kidney Function in Japanese Adults: A Longitudinal Analysis for the Fukushima Health Management Survey, 2011–2015
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Junichiro James Kazama, Hironori Nakano, Makoto Miyazaki, Mitsuaki Hosoya, Eri Eguchi, Hirooki Yabe, Masaharu Maeda, Atsushi Takahashi, Hitoshi Ohto, Seiji Yasumura, Michio Shimabukuro, Tetsuya Ohira, Akira Sakai, Enbo Ma, Kenji Kamiya, and Hiromasa Ohira
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Male ,030204 cardiovascular system & hematology ,Fukushima Health Management Survey ,Kidney ,urologic and male genital diseases ,0302 clinical medicine ,Japan ,Risk Factors ,Surveys and Questionnaires ,Vegetables ,Odds Ratio ,eGFR ,Cumulative incidence ,Renal Insufficiency ,030212 general & internal medicine ,Aged, 80 and over ,Nutrition and Dietetics ,Proteinuria ,Incidence ,Incidence (epidemiology) ,Middle Aged ,Dietary pattern ,Disease Progression ,Female ,dietary pattern ,medicine.symptom ,lcsh:Nutrition. Foods and food supply ,Glomerular Filtration Rate ,Adult ,medicine.medical_specialty ,Renal function ,lcsh:TX341-641 ,Article ,03 medical and health sciences ,Internal medicine ,medicine ,Humans ,Renal Insufficiency, Chronic ,Aged ,business.industry ,Odds ratio ,medicine.disease ,Health Surveys ,Confidence interval ,Diet ,trajectory analysis ,proteinuria ,business ,chronic kidney disease ,Food Science ,Kidney disease - Abstract
To investigate associations between dietary patterns and the risk of impaired kidney function, we analyzed data from 14,732 participants (40&ndash, 89 years) who completed the baseline diet questionnaire of The Fukushima Health Management Survey in 2011. The incidence of chronic kidney disease (CKD) (estimated glomerular filtration rate (eGFR) <, 60 mL/min/1.73 m2 or proteinuria (&ge, 1+ by dipstick test)) and annual changes in eGFR were assessed from 2012 to 2015. Three major dietary patterns were identified. The adjusted cumulative incidence ratio of the highest vs. lowest tertile of a vegetable diet scores was 0.90 (95% confidence interval (CI): 0.82, 1.00) for eGFR <, 60 mL/min/1.73 m2, 0.68 (95% CI: 0.52, 0.90) for proteinuria, and 0.88 (95% CI: 0.80, 0.97) for CKD (P for trend = 0.031, 0.007, and 0.005, respectively). The incident risk of CKD in the highest tertile of juice diet scores was 18% higher than the lowest tertile. The odds ratio of the highest vs. lowest tertile of vegetable diet scores was 0.85 (95% CI: 0.75, 0.98) in the rapidly decreasing eGFR group (P for trend = 0.009). We did not observe significant associations for the meat dietary pattern. A Japanese vegetable diet could reduce the risk of developing impaired kidney function and CKD.
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- 2021
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41. DDX6 Is Essential for Oocyte Development and Maturation in
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Junxiu, Wang, Tingting, Li, Sufang, Deng, Enbo, Ma, Jianzhen, Zhang, and Shuping, Xing
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DEAD-box helicase ,DDX6 ,Locusta migratoria ,oocyte ,vitellogenesis ,Article - Abstract
Simple Summary Insect reproduction is an important and complicated process required for producing healthy individuals and maintaining their population abundance. Thus, it could become a valuable target for insect biological control. To date, many factors and pathways have been revealed to be involved in this reproductive process, but it is still far from a full understanding of the molecular network underlying this process. We herein investigated a RNA helicase, DEAD-box protein 6 (DDX6) in Locusta migratoria, a global, destructive pest, and found that knockdown LmDDX6 downregulated expression levels of juvenile hormone receptor gene methoprene-tolerant and its target genes 78-kDa glucose-regulated proteins, thus reducing vitellogenin expression and ultimately impairing the ovary development and oocyte maturation. These results demonstrate that LmDDX6 is a key player in female locust reproduction, providing, thus, a novel target for locust biological control. Abstract DEAD-box protein 6 (DDX6) is a member of the DDX RNA helicase family that exists in all eukaryotes. It has been extensively studied in yeast and mammals and has been shown to be involved in messenger ribonucleoprotein assembly, mRNA storage, and decay, as well as in miRNA-mediated gene silencing. DDX6 participates in many developmental processes but the biological function of DDX6 in insects has not yet been adequately addressed. Herein, we characterized the LmDDX6 gene that encodes the LmDDX6 protein in Locusta migratoria, a global, destructive pest. LmDDX6 possesses five motifs unique to the DDX6 subfamily. In the phylogenetic tree, LmDDX6 was closely related to its orthologs in Apis dorsata and Zootermopsis nevadensis. RT-qPCR data revealed high expression of LmDDX6 in the ovary, muscle, and fat body, with a declining trend in the ovary after adult ecdysis. LmDDX6 knockdown downregulated the expression levels of the juvenile hormone receptor Met, and genes encoding Met downstream targeted Grp78-1 and Grp78-2, reduced LmVg expression, and impaired ovary development and oocyte maturation. These results demonstrate that LmDDX6 plays an essential role in locust female reproduction and, thus, could be a novel target for locust biological control.
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- 2020
42. The RNA helicase DDX3 is required for ovarian development and oocyte maturation in Locusta migratoria
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Jianzhen Zhang, Enbo Ma, Tingting Li, Sufang Deng, Shuping Xing, and Junxiu Wang
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0106 biological sciences ,0301 basic medicine ,Nymph ,animal structures ,Physiology ,Gene Expression ,Locusta migratoria ,Ovary ,Genes, Insect ,Receptors, Cell Surface ,01 natural sciences ,Biochemistry ,03 medical and health sciences ,Vitellogenin ,Vitellogenins ,Oogenesis ,Transcription (biology) ,RNA interference ,medicine ,Animals ,Phylogeny ,biology ,Egg Proteins ,Vitellogenesis ,General Medicine ,biology.organism_classification ,Oocyte ,RNA Helicase A ,Cell biology ,Juvenile Hormones ,010602 entomology ,030104 developmental biology ,medicine.anatomical_structure ,Insect Science ,biology.protein ,Oocytes ,Insect Proteins ,Female ,RNA Interference ,Locust ,RNA Helicases ,Signal Transduction - Abstract
DDX3 represents a well-defined subfamily of DEAD-box RNA helicase and exerts multiple functions in RNA metabolism, cell cycle, tumorigenesis, signal pathway, and fertility. Our previous study has shown that LmDDX3, the ortholog of DDX3 in Locusta migratoria, is ubiquitously expressed, and with a high abundance in testis and ovary. Knockdown of LmDDX3 results in a lethal phenotype in nymph, but it still remains unclear for its role in reproductive process. In this study, we therefore characterized LmDDX3 expression in female adult locust and analyzed its function in oocyte development. LmDDX3 was expressed in all tissues examined with significant more transcripts in ovary and hindgut. In ovary, a strong expression level was detected at the day just after adult eclosion, and a dramatic reduction then occurred during the oocyte development. LmDDX3 RNAi led to a reduced vitellogenin (Vg) expression in fat body via partially at least, the JH signaling pathway, and caused an upregulation of vitellogenin receptor (VgR) in ovary, and thus blocked the ovarian development and oocyte maturation. Sequence and phylogenetic analysis indicated that LmDDX3 was closely related to termite DDX3. Taken together, these data reveal a critical role for LmDDX3 in regulating the transcription of Vg and VgR, two major factors in vitellogenesis that is a key process required for ovary development and oocyte maturation in locust, and contribute thereof a new putative target for locust biological control.
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- 2020
43. A dsRNA-degrading nuclease (dsRNase2) limits RNAi efficiency in the Asian corn borer (Ostrinia furnacalis)
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Yunhe Fan, Mureed Abbas, Kun Yan Zhu, Yan-Li Wang, Tao Li, Kristopher Silver, Jianzhen Zhang, Anastasia M.W. Cooper, Huifang Song, and Enbo Ma
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Gene knockdown ,Reporter gene ,biology ,fungi ,Pupa ,Moths ,biology.organism_classification ,Endonucleases ,Marker gene ,Insect Control ,Zea mays ,General Biochemistry, Genetics and Molecular Biology ,Cell biology ,RNA silencing ,RNA interference ,Insect Science ,Larva ,Gene expression ,Gene silencing ,Animals ,RNA Interference ,Agronomy and Crop Science ,Ecology, Evolution, Behavior and Systematics ,Ostrinia furnacalis ,RNA, Double-Stranded - Abstract
The efficiency of RNA interference (RNAi) varies substantially among different insect species. Rapid degradation of double-stranded RNA (dsRNA) by dsRNA-degrading nucleases (dsRNases) has been implicated to cause low RNAi efficiency in several insect species. In this study, we identified four dsRNase genes (OfdsRNase1, OfdsRNase2, OfdsRNase3 and OfdsRNase4) from the Asian corn borer (Ostrinia furnacalis) transcriptome database. Bioinformatic analyses showed that each deduced protein sequence contained endonuclease NS domains and signal peptides. Gene expression analysis revealed that OfdsRNase2 was exclusively expressed in the midgut of larvae. RNAi efficiency was investigated in 2-d-old fifth-instar larvae (high expression of dsRNase2) and 2-d-old pupae (low expression of dsRNase2) by feeding or injecting dsRNA targeting a marker gene that encodes the lethal giant larvae protein (OfLgl). Our results showed that OfLgl only partially silenced the expression of OfLgl in pupae, but not in larvae, suggesting that OfdsRNase2 could contribute to lower RNAi efficiency in larval stages. This hypothesis was supported by our RNAi-of-RNAi experiment using a tissue culture technique where the silencing efficiency against the reporter gene, OfHex1, was significantly improved after knockdown of OfdsRNase2. When double luciferase assays were performed to evaluate the role of the four dsRNases in vitro, only OfdsRNase2 expressed in S2 cells significantly affected RNAi efficiency by degrading dsRNA. Taken together, our results suggested that the degradation of dsRNA by OfdsRNase2 in the midgut contributed to low RNAi efficiency in O. furnacalis larvae.
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- 2020
44. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems
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Basem Al-Shayeb, David Paez-Espino, Nikos C. Kyrpides, Dov Gertz, David Burstein, Isaac P. Witte, Janice S. Chen, Lucas B. Harrington, Enbo Ma, Jillian F. Banfield, and Jennifer A. Doudna
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Sequence Homology ,Medical and Health Sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Untranslated RNA ,Genome editing ,CRISPR ,Clustered Regularly Interspaced Short Palindromic Repeats ,Ribonuclease III ,Kinetoplastida ,crRNA ,Phylogeny ,0303 health sciences ,scoutRNA ,Genome ,biology ,Bacterial ,Biological Sciences ,RNA, Bacterial ,Infectious Diseases ,RNA, Guide, Kinetoplastida ,DNA, Bacterial ,1.1 Normal biological development and functioning ,Computational biology ,Article ,03 medical and health sciences ,tracrRNA ,Bacterial Proteins ,Candidate Phyla Radiation (CPR) bacteria ,Underpinning research ,Sequence Homology, Nucleic Acid ,Escherichia coli ,Genetics ,Molecular Biology ,030304 developmental biology ,Trans-activating crRNA ,Cas12d ,Cas12c ,Endodeoxyribonucleases ,Bacteria ,Base Sequence ,Nucleic Acid ,Cas9 ,RNA ,Cell Biology ,DNA ,Small Untranslated ,chemistry ,biology.protein ,RNA, Small Untranslated ,Nucleic Acid Conformation ,CRISPR-Cas Systems ,CRISPR-cas ,Sequence Alignment ,030217 neurology & neurosurgery ,Genome, Bacterial ,Guide ,RuvC nuclease domain ,Developmental Biology - Abstract
CRISPR-Cas12c/d proteins share limited homology with Cas12a and Cas9 bacterial CRISPR RNA (crRNA)-guided nucleases used widely for genome editing and DNA detection. However, Cas12c (C2c3)- and Cas12d (CasY)-catalyzed DNA cleavage and genome editing activities have not been directly observed. We show here that a short-complementarity untranslated RNA (scoutRNA), together with crRNA, is required for Cas12d-catalyzed DNA cutting. The scoutRNA differs in secondary structure from previously described tracrRNAs used by CRISPR-Cas9 and some Cas12 enzymes, and in Cas12d-containing systems, scoutRNA includes a conserved five-nucleotide sequence that is essential for activity. In addition to supporting crRNA-directed DNA recognition, biochemical and cell-based experiments establish scoutRNA as an essential cofactor for Cas12c-catalyzed pre-crRNA maturation. These results define scoutRNA as a third type of transcript encoded by a subset of CRISPR-Cas genomic loci and explain how Cas12c/d systems avoid requirements for host factors including ribonuclease III for bacterial RNA-mediated adaptive immunity.
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- 2020
45. Short-Term Effects of Early Postoperative Celecoxib Administration for Pain, Sleep Quality, and Range of Motion After Total Knee Arthroplasty: A Randomized Controlled Trial
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Enbo Ma, Takeru Shimizu, Koichi Hashimoto, Keiko Fujie, Noriko Taguchi, and Takeo Mammoto
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musculoskeletal diseases ,Visual analogue scale ,Total knee arthroplasty ,Knee Joint ,law.invention ,Fentanyl ,03 medical and health sciences ,0302 clinical medicine ,Randomized controlled trial ,Double-Blind Method ,law ,Medicine ,Humans ,Orthopedics and Sports Medicine ,Range of Motion, Articular ,Arthroplasty, Replacement, Knee ,030222 orthopedics ,Pain, Postoperative ,Sleep quality ,business.industry ,Treatment Outcome ,Celecoxib ,Anesthesia ,business ,Range of motion ,Sleep ,medicine.drug - Abstract
Background We hypothesized that early postoperative administration of celecoxib would reduce pain scores and improve sleep quality and active range of motion after total knee arthroplasty (TKA) under general anesthesia. Methods Patients in the celecoxib group received 400 mg of celecoxib 2 hours after TKA, followed 6 hours later by 200 mg of celecoxib. Patients in the control group received 400 mg of celecoxib the second day after surgery. Patients in both group had access to patient-controlled analgesia fentanyl. The primary outcome measure was the patient-reported visual analog scale (VAS) pain score the second day after TKA. The secondary outcome measure was sleep quality (days 1, 2, and 7 postoperatively). Active knee joint range of motion was assessed on days 2 and 7 postoperatively, and VAS pain scores were evaluated on postoperative days 1 to 7. Total fentanyl consumption was also assessed. Results Compared to the control group, the celecoxib group had significantly lower median VAS pain scores on postoperative days 1 and 2, significantly less nocturnal awakening (in minutes) and frequency of body motion, and better sleep efficacy on postoperative day 1. The celecoxib group also had a significantly better median flexion angle (°) on postoperative days 2 and 7, and lower cumulative fentanyl consumption. Conclusion Early administration of celecoxib after TKA was associated with significantly reduced early VAS pain scores and improved sleep quality and active knee flexion angles. Thus, the early administration of celecoxib after TKA under general anesthesia may reduce pain and improve sleep quality and functional recovery. Levels of Evidence Level II, therapeutic study. Trial Registration UMIN-CTR 000014624 (July 23, 2014).
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- 2020
46. Both LmCYP4G genes function in decreasing cuticular penetration of insecticides in Locusta migratoria
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Zhan-Feng Zhang, René Feyereisen, Rongrong Yu, Yongliang Fan, Kun Yan Zhu, Enbo Ma, Jianzhen Zhang, Zhitao Yu, Lixian Wu, and Tong-Xian Liu
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Insecticides ,Insecta ,biology ,Endoplasmic reticulum ,RNA ,Cytochrome P450 ,Locusta migratoria ,General Medicine ,biology.organism_classification ,Cell biology ,Transcriptome ,Cytochrome P-450 Enzyme System ,Cytoplasm ,Insect Science ,biology.protein ,Gene silencing ,Animals ,Insect Proteins ,Integumentary System ,Agronomy and Crop Science ,Gene ,Locust - Abstract
Background Cuticular hydrocarbons (CHCs) have a critical role in preventing desiccation and penetration of xenobiotics in insects. Previous studies have shown that cytochrome P450 subfamily 4G (CYP4G) enzymes are oxidative decarbonylases, essential for CHC biosynthesis. However, it is unclear whether there are functional differences between the two CYP4G genes in most insects. In Locusta migratoria, we identified two CYP4G genes (LmCYP4G62 and LmCYP4G102). LmCYP4G102 plays a critical role in the synthesis of CHCs, but the function of LmCYP4G62 is unknown. Results We identified, characterized, and compared two LmCYP4G genes, based on L. migratoria transcriptomic and genomic databases. RT-qPCR showed that both were highly expressed in tissues with which oenocytes are associated, the integument and fat body. Immunostaining indicated that LmCYP4G62 and LmCYP4G102 were highly abundant in oenocytes in these tissues. However, the two enzymes had a different subcellular distribution, with LmCYP4G62 localized on the plasma membrane and LmCYP4G102 dispersed throughout the oenocyte cytoplasm, presumably on the endoplasmic reticulum. RNA interference-mediated gene silencing against each of the two genes resulted in reduced CHC contents, in all classes for LmCYP4G102, but mostly shorter chain CHCs for LmCYP4G62. Silencing of both genes resulted in increased insecticide penetration through the cuticle, and increased locust susceptibility to desiccation and insecticides. Conclusion Our studies suggest that both LmCYP4G62 and LmCYP4G102 contribute to hydrocarbon biosynthesis and play key roles in protecting locusts from water loss and insecticide penetration, but they are not fully redundant. Further, the two LmCYP4G genes might be used as new targets for insect pest management. © 2020 Society of Chemical Industry.
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- 2020
47. LmCht5-1 promotes pro-nymphal molting during locust embryonic development
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Zhang Tingting, Lu Gao, Daqi Li, Jianzhen Zhang, Enbo Ma, Kun Yan Zhu, Sheng Li, Liu Weiwei, and Bernard Moussian
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Nymph ,0106 biological sciences ,0301 basic medicine ,Embryo, Nonmammalian ,Microinjections ,media_common.quotation_subject ,Cuticle ,Apolysis ,Embryonic Development ,Locusta migratoria ,Chitin ,Arthropod cuticle ,Insect ,Molting ,01 natural sciences ,Biochemistry ,03 medical and health sciences ,Animals ,RNA, Messenger ,Molecular Biology ,RNA, Double-Stranded ,media_common ,biology ,Epidermis (botany) ,Hydrolysis ,Chitinases ,fungi ,Embryogenesis ,Gene Expression Regulation, Developmental ,biology.organism_classification ,Cell biology ,010602 entomology ,030104 developmental biology ,Insect Science ,Chitinase ,biology.protein ,Insect Proteins ,Locust - Abstract
Chitinases, key enzymes involved in degradation of chitin, have been repeatedly shown to play an indispensable role during insect post-embryonic molting processes at stage transitions. However, how chitinases affect insect embryonic development remains to be analyzed. In this study, we investigated the role of chitinase 5-1 (LmCht5-1) during embryonic development of the hemimetabolous insect Locusta migratoria. LmCht5-1 transcript levels were high in pro-nymphs during late embryogenesis. The respective protein localized to both the pro-nymphal and, to a much lesser extent, the newly formed nymphal cuticle. After injection of double stranded RNA against LmCht5-1 into 8 days old embryos, LmCht5-1 transcripts were strongly reduced. Most of dsLmCht5-1-injected pro-nymphs failed to develop to first-instar nymphs and died at or before hatching. Histological analyzes showed that degradation of the pro-nymph cuticle was blocked in these animals. At the ultra-structural level, we found that LmCht5-1 was needed for the degradation of the lamellar procuticle, while the separation of the procuticle from the epicuticle and epidermis (apolysis) was independent of LmCht5-1 function. Taken together, our results indicate that LmCht5-1 and other yet unknown degrading enzymes act in parallel at distinct positions of the cuticle during molting of the pro-nymph to the first-instar nymph during locust embryogenesis.
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- 2018
48. Comparisons of microsomal cytochrome P450 content and enzymatic activity towards selected model substrates and insecticides in different tissues from the migratory locust (Locusta migratoria)
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Kun Yan Zhu, Jiao Liu, Enbo Ma, Jianzhen Zhang, Haihua Wu, Kristopher Silver, Xueyao Zhang, and Yue Gao
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Nymph ,0301 basic medicine ,Insecticides ,Malpighian tubule system ,Environmental Engineering ,Health, Toxicology and Mutagenesis ,Locusta migratoria ,Methoprene ,Carbaryl ,Xenobiotics ,03 medical and health sciences ,chemistry.chemical_compound ,Cytochrome P-450 Enzyme System ,Nitriles ,Pyrethrins ,Animals ,Environmental Chemistry ,Tissue Distribution ,Pyrethroid ,biology ,Public Health, Environmental and Occupational Health ,Cytochrome P450 ,Midgut ,General Medicine ,General Chemistry ,Migratory locust ,Monooxygenase ,biology.organism_classification ,Pollution ,030104 developmental biology ,Deltamethrin ,chemistry ,Biochemistry ,Malathion ,biology.protein ,Chlorpyrifos - Abstract
Cytochrome P450 monooxygenases (P450s) are important enzymes for biotransformations of various endogenous and xenobiotic substances in various organisms. In this study, we examined microsomal P450 protein content and enzymatic activity in four major detoxification tissues dissected from fifth-instar nymphs of the migratory locust (Locusta migratoria). The highest microsomal P450 protein content was found in the gastric caeca (a part of the midgut), followed by the midgut, Malpighian tubules and fat bodies. Microsomal P450s showed the highest aromatic hydroxylation, O-dealkylation and O-dearylation activities towards six of the seven model substrates examined in the fat bodies. Although the gastric caeca showed the highest P450 protein content, the enzymatic activities towards six of the seven model substrates were the lowest in this tissue. Further, the midgut, gastric caeca and fat bodies showed significant metabolic activities towards two pyrethroid insecticides (deltamethrin and fluvalinate), but no significant activities towards the other four insecticides (malathion, chlorpyrifos, carbaryl and methoprene). These results support our conclusions: 1) total P450 protein content alone cannot be reliably used to predict its enzymatic activity, and 2) insect P450 enzymatic activity is both tissue and substrate dependent.
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- 2018
49. Brazilin induces T24 cell death through c-Fos and GADD45β independently regulated genes and pathways
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He Jiao, Enbo Ma, Jianzhen Zhang, Yaowu Zheng, Tingting Zhang, Guangying Wang, Xihua Yang, Shuaina Zhang, and Jianbing Wang
- Subjects
0301 basic medicine ,Programmed cell death ,Clinical Biochemistry ,Brazilin ,Cell morphology ,Biochemistry ,c-Fos ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Genetics ,medicine ,Viability assay ,Molecular Biology ,Gene ,Bladder cancer ,biology ,Chemistry ,fungi ,Cell Biology ,Transfection ,medicine.disease ,Cell biology ,030104 developmental biology ,030220 oncology & carcinogenesis ,biology.protein - Abstract
Purified Brazilin from Sappan wood extract has been reported with significant antitumor effect, especially on human T24 cells and bladder cancer mouse models. Brazilin can significantly induce expression of c-Fos and GADD45β and transfection expression of c-Fos and GADD45β in T24 cells can induce significant cell morphology changes, reduced viability and cell death, while transfection of siRNA-c-Fos and siRNA-GADD45β can reverse the induced cell death. Co-transfection of both c-Fos and GADD45β into T24 cells resulted in a significantly additive effect when compared to single transfection with only c-Fos or GADD45β. Meanwhile, transfection of interfering siRNA-c-Fos or siRNA-GADD45β can partially rescue the cell viability and siRNA co-transfection showed increased rescue rate. The transfection expression and interference with pcDNA3.1-c-Fos/siRNA-c-Fos or pcDNA3.1-GADD45β/siRNA-GADD45β did not affect each other's expression. Moreover, analysis of c-Fos and GADD45β regulated genes and signal pathways showed that no common regulated genes or pathways were present. All the results indicated that c-Fos and GADD45β mediate independent Brazilin-inducible genes and pathways. © 2018 IUBMB Life, 70(11):1101-1110, 2018.
- Published
- 2018
50. Transcriptome-wide survey, gene expression profiling and exogenous chemical-induced transcriptional responses of cytochrome P450 superfamily genes in migratory locust (Locusta migratoria)
- Author
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Xiaolin Kang, Haihua Wu, Kun Yan Zhu, Jianzhen Zhang, Xueyao Zhang, Enbo Ma, and Kristopher Silver
- Subjects
Nymph ,0106 biological sciences ,0301 basic medicine ,Locusta migratoria ,01 natural sciences ,Biochemistry ,Transcriptome ,03 medical and health sciences ,Cytochrome P-450 Enzyme System ,Animals ,ORFS ,Molecular Biology ,Gene ,Phylogeny ,Illumina dye sequencing ,Noxae ,Genetics ,biology ,Gene Expression Profiling ,fungi ,Cytochrome P450 ,Migratory locust ,biology.organism_classification ,Gene expression profiling ,010602 entomology ,030104 developmental biology ,Gene Expression Regulation ,Insect Science ,biology.protein ,Locust - Abstract
Cytochrome P450 monooxygenases (CYPs) belong to a large superfamily of heme-containing enzymes catalyzing at least 60 different types of chemically distinct reactions. Insect CYPs play key roles in biotransformation of insecticides and plant chemicals, and are implicated in insecticide resistance and insect adaptation to their host plants. Insect CYPs are well studied in model insects, but little is known about the CYP superfamily in paurometabolous insects. We employed Illumina sequencing technology to identify 71 partial and 78 full-length open reading frames (ORFs) of LmCYP genes from the migratory locust (Locusta migratoria), one of the most destructive paurometabolous insect pests in the world. Seventy-eight LmCYPs with complete ORFs were formally named and classified into 19 families and 43 subfamilies. The majority of LmCYPs were mainly expressed in nymphal and adult stages, but LmCYP expression varied widely among thirteen different tissues examined. Regulatory elements were predicted in the promoter regions of LmCYP genes, and subsequent exposure of locusts to 12 different exogenous chemicals showed that 2-tridecanone and xanthotoxin were the most effective at increasing LmCYP expression. Our results represent the first transcriptome-wide analysis of the LmCYP superfamily from migratory locust, and provide a foundation for understanding the physiological functions, functional diversity, evolution, and regulatory mechanisms controlling the expression of the CYP gene superfamily in the locust.
- Published
- 2018
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