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1. Large-Scale Outbreak of Mycoplasma pneumoniae Infection, Marseille, France, 2023-2024

Author

Edouard, Sophie, Boughammoura, Housni, Colson, Philippe, La Scola, Bernard, Fournier, Pierre-Edouard, and Fenollar, Florence

Subjects
Marseille, France -- Health aspects, Epidemics -- Causes of -- Statistics -- France, Respiratory tract infections -- Causes of -- Statistics, Mycoplasma infections -- Causes of -- Statistics, Mycoplasma pneumoniae -- Identification and classification, Health
Abstract

Mycoplasma pneumoniae is known to cause upper respiratory tract infections and pneumonia, especially in children 5-15 years of age (2). Although mostly sporadic, M. pneumoniae infections may occur as successive [...]

Published
2024
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2. Judicial Opinion 129.

Author

Arahal, David R, Bull, Carolee T, Christensen, Henrik, Chuvochina, Maria, Dedysh, Svetlana N, Fournier, Pierre-Edouard, Konstantinidis, Konstantinos T, Parker, Charles T, Ventosa, Antonio, Young, Peter, and Göker, Markus

Subjects
Microbiology, Biological Sciences, Animals, Hylobates, Phylogeny, Sequence Analysis, DNA, RNA, Ribosomal, 16S, DNA, Bacterial, Bacterial Typing Techniques, Base Composition, Fatty Acids, Firmicutes, archaea, bacteria, classification, division, nomenclature, phylum, taxonomy, Evolutionary Biology, Medical Microbiology, Evolutionary biology
Abstract

Opinion 129 addresses the status of Firmicutes corrig. Gibbons and Murray 1978 (Approved Lists 1980). The name has the category 'division' and was included in the Approved Lists of Bacterial Names, although that category had previously been removed from the International Code of Nomenclature of Bacteria (1975 revision onwards). When the category 'phylum' was introduced into the International Code of Nomenclature of Prokaryotes (ICNP) in 2021, equivalence between 'phylum' and 'division' was not stipulated. Since the definition of the taxonomic categories and their relative order is one of the principal tasks of every code of nomenclature, the inclusion of Firmicutes corrig. Gibbons and Murray 1978 in the Approved Lists was an error. The name is either not validly published or illegitimate because its category is not covered by the ICNP. If Firmicutes corrig. Gibbons and Murray 1978 (Approved Lists 1980) was a validly published phylum name, it would be illegitimate because it would contravene Rule 8, which does not permit any deviation from the requirement to derive a phylum name from the name of the type genus. Since Firmicutes corrig. Gibbons and Murray 1978 is also part of a 'misfitting megaclassification' recognized in Opinion 128, the name is rejected, without any pre-emption regarding a hypothetically validly published name Firmicutes at the rank of phylum. Gracilicutes Gibbons and Murray 1978 (Approved Lists 1980) and Anoxyphotobacteriae Gibbons and Murray 1978 (Approved Lists 1980) are also rejected. The validly published phylum names have a variety of advantages over their not validly published counterparts and cannot be replaced with ad hoc names suggested in the literature. To ease the transition, it is recommended to mention the not validly published phylum names which strongly deviate in spelling from their validly published counterparts along with the latter in publications during the next years.

Published
2024

4. Judicial Opinions 123-127.

Author

Arahal, David R, Bull, Carolee T, Busse, Hans-Jürgen, Christensen, Henrik, Chuvochina, Maria, Dedysh, Svetlana N, Fournier, Pierre-Edouard, Konstantinidis, Konstantinos T, Parker, Charles T, Rossello-Mora, Ramon, Ventosa, Antonio, and Göker, Markus

Subjects
Microbiology, Biological Sciences, Evolutionary Biology, Phylogeny, DNA, Bacterial, RNA, Ribosomal, 16S, Bacterial Typing Techniques, Sequence Analysis, DNA, Base Composition, Fatty Acids, Medical Microbiology, Evolutionary biology
Abstract

Opinion 123 places the epithet of the name Aeromonas punctata on the list of rejected epithets and clarifies the citation of authors of selected names within the genus Aeromonas. Opinion 124 denies the request to place Borreliella on the list of rejected names because the request is based on a misinterpretation of the Code, which is clarified. There are alternative ways to solve the perceived problem. Opinion 125 denies the request to place Lactobacillus fornicalis on the list of rejected names because the provided information does not yield a reason for rejection. Opinion 126 denies the request to place Prolinoborus and Prolinoborus fasciculus on the list of rejected names because a relevant type strain deposit was not examined. Opinion 127 grants the request to assign the strain deposited as ATCC 4720 as the type strain of Agrobacterium tumefaciens, thereby correcting the Approved Lists. These Opinions were ratified by the voting members of the International Committee on Systematics of Prokaryotes.

Published
2023

5. Judicial Opinion 128.

Author

Arahal, David R, Bull, Carolee T, Christensen, Henrik, Chuvochina, Maria, Dedysh, Svetlana N, Fournier, Pierre-Edouard, Konstantinidis, Konstantinos T, Parker, Charles T, Rossello-Mora, Ramon, Ventosa, Antonio, and Göker, Markus

Subjects
Microbiology, Biological Sciences, Evolutionary Biology, Animals, Phylogeny, Hylobates, Sequence Analysis, DNA, RNA, Ribosomal, 16S, DNA, Bacterial, Bacterial Typing Techniques, Base Composition, Fatty Acids, Bacteria, Proteobacteria, Medical Microbiology, Evolutionary biology
Abstract

Judicial Opinion 128 addresses nomenclatural issues related to the names of classes validly published under the International Code of Nomenclature of Prokaryotes. It is confirmed that the common ending -proteobacteria of some class names is not indicative of a joint taxonomic or phylogenetic placement; that the nomenclatural type of Mollicutes Edward and Freundt 1967 (Approved Lists 1980) is Mycoplasmatales Freundt 1955 (Approved Lists 1980); and that the placement of a name on the list of rejected names does not imply that another name with the same spelling but a distinct rank is also placed on that list. The names at the rank of class Anoxyphotobacteria (Gibbons and Murray 1978) Murray 1988, Archaeobacteria Murray 1988, Bacteria Haeckel 1894 (Approved Lists 1980), Firmibacteria Murray 1988, Microtatobiotes Philip 1956 (Approved Lists 1980), Oxyphotobacteria (ex Gibbons and Murray 1978) Murray 1988, Photobacteria Gibbons and Murray 1978 (Approved Lists 1980), Proteobacteria Stackebrandt et al. 1988, Schizomycetes Nägeli 1857 (Approved Lists 1980), Scotobacteria Gibbons and Murray 1978 (Approved Lists 1980) are placed on the list of rejected names. For three common nominative singular suffixes of genus names their genitive singular and nominative plural forms are confirmed: -bacter (-bacteris, -bacteres); -fex (-ficis, -fices); and -genes (-genis, -genes). The class names Aquificae Reysenbach 2002, Chrysiogenetes Garrity and Holt 2002, Chthonomonadetes Lee et al. 2011, Gemmatimonadetes Zhang et al. 2003, Opitutae Choo et al. 2007 and Verrucomicrobiae Hedlund et al. 1998 are orthographically corrected to Aquificia, Chrysiogenia, Chthonomonadia, Gemmatimonadia, Opitutia and Verrucomicrobiia, respectively.

Published
2023

6. Guidelines for interpreting the International Code of Nomenclature of Prokaryotes and for preparing a Request for an Opinion.

Author

Arahal, David R, Bull, Carolee T, Busse, Hans-Jürgen, Christensen, Henrik, Chuvochina, Maria, Dedysh, Svetlana N, Fournier, Pierre-Edouard, Konstantinidis, Konstantinos T, Parker, Charles T, Rossello-Mora, Ramon, Ventosa, Antonio, and Göker, Markus

Subjects
Microbiology, Biological Sciences, Evolutionary Biology, Phylogeny, Sequence Analysis, DNA, RNA, Ribosomal, 16S, DNA, Bacterial, Bacterial Typing Techniques, Base Composition, Fatty Acids, advice, archaea, bacteria, classification, manual, regulations, standards, Medical Microbiology, Evolutionary biology
Abstract

In this paper the Judicial Commission provides general guidance for interpreting the International Code of Nomenclature of Prokaryotes (ICNP) and specific assistance to authors, reviewers and editors of a Request for an Opinion, or of other suggestions related to the ICNP. The role of the Judicial Commission is recapitulated, particularly with respect to the processing of such Requests. Selected kinds of nomenclature-related proposals are discussed that are unsuitable as the basis for a Request. Particular emphasis is put on Requests for placing names or epithets on the list of nomina rejicienda, and a dichotomous identification key is provided to guide potential authors of a Request that targets the name of a species or subspecies because of issues with its type strain. To this end, the criteria for the valid publication of such names under the ICNP are revisited. Aspects of other kinds of Requests are also addressed. The study is based on a comprehensive review of all Judicial Opinions issued since the publication of the Approved Lists in 1980. One goal of this paper is to assist potential authors in deciding whether their concern should be the subject of a Request, and if so, in composing it with the greatest chance of success. It is also clarified how to obtain additional help regarding nomenclature-related issues.

Published
2023

7. Judicial Opinions 112-122.

Author

Arahal, David R, Busse, Hans-Jürgen, Bull, Carolee T, Christensen, Henrik, Chuvochina, Maria, Dedysh, Svetlana N, Fournier, Pierre-Edouard, Konstantinidis, Konstantinos T, Parker, Charles T, Rossello-Mora, Ramon, Ventosa, Antonio, and Göker, Markus

Subjects
Biological Sciences, Evolutionary Biology, Peace, Justice and Strong Institutions, Bacterial Typing Techniques, Base Composition, DNA, Bacterial, Fatty Acids, Phylogeny, RNA, Ribosomal, 16S, Sequence Analysis, DNA, Microbiology, Medical Microbiology, Evolutionary biology
Abstract

Opinion 112 denies the request to place Seliberia Aristovskaya and Parinkina 1963 (Approved Lists 1980) on the list of rejected names because the information provided is insufficient. For the same reason, Opinion 113 denies the request to reject Shewanella irciniae Lee et al. 2006 and Opinion 114 denies the request to reject the name Enterobacter siamensis Khunthongpan et al. 2014. Opinion 115 rejects the epithet of Moorella thermoautotrophica (Wiegel et al. 1981) Collins et al. 1994, which is regarded as a nomen confusum. To assess the consequences of Rule 8, Opinion 116 revisits names of taxa above the rank of genus which should comprise the stem of the name of a nomenclatural type and a category-specific ending but fail to do so. Such names should be orthographically corrected if the sole error is the inadvertent usage of an incorrect stem or be regarded as illegitimate if otherwise. The necessary corrections are made for a number of names. In Opinion 117, the request to designate Methylothermus subterraneus Hirayama et al. 2011 as the type species of the genus Methylothermus is denied because an equivalent action compatible with the Code was already conducted. In Opinion 118, the possible orthographical correction of the name Flaviaesturariibacter is treated, as are the analogous cases of Fredinandcohnia and Hydrogeniiclostidium. The genus names are corrected to Flaviaestuariibacter, Ferdinandcohnia and Hydrogeniiclostridium, respectively. Opinion 119 concludes that assigning Actinomycetales Buchanan 1917 (Approved Lists 1980) as nomenclatural type of the class Actinobacteria Stackebrandt et al. 1997 would not render that name legitimate if Rule 8 remained retroactive. The request is granted but Actinomycetales is also assigned as type of Actinomycetes Krassilnikov 1949 (Approved Lists 1980). In Opinion 120, the possible orthographical correction of the name Amycolatopsis albidoflavus is treated. It is grammatically corrected to Amycolatopsis albidoflava. Six names which could according to Rule 61 be grammatically corrected by anyone are also corrected. Opinion 121 denies the request to revise Opinion 69 and notes that Opinion 69 does not have the undesirable consequences emphasized in the request. In Opinion 122, the request to reject various taxon names of Mollicutes proposed in 2018 is denied because it is based on misinterpretations of the Code, which are clarified. Alternative ways to solve the perceived problems are outlined. These Opinions were ratified by the voting members of the International Committee on Systematics of Prokaryotes.

Published
2022

10. New Genotype of Coxiella burnetii Causing Epizootic Q Fever Outbreak in Rodents, Northern Senegal

Author

Mangombi-Pambou, Joa, Granjon, Laurent, Labarrere, Clement, Kane, Mamadou, Niang, Youssoupha, Fournier, Pierre-Edouard, Delerce, Jeremy, Fenollar, Florence, and Mediannikov, Oleg

Subjects
Q fever -- Diagnosis -- Care and treatment, Genotype -- Analysis, Rickettsial diseases -- Risk factors -- Prevention, Health
Abstract

Coxiella burnetii is a causative agent of Q fever, a worldwide zoonosis. The disease may be acute (relatively benign) or chronic (with a wide range of clinical manifestations that can [...]

Published
2023

11. Bacterial Agents Detected in 418 Ticks Removed from Humans during 2014-2021, France

Author

Jumpertz, Marie, Sevestre, Jacques, Luciani, Lea, Houhamdi, Linda, Fournier, Pierre-Edouard, and Parola, Philippe

Subjects
Tick-borne diseases -- Statistics -- Causes of -- Risk factors, Bacteria, Pathogenic -- Statistics -- Identification and classification, Health
Abstract

Ticks are obligate hematophagous arthropods that are the second most prevalent vectors of human zoonotic pathogens after mosquitoes (1). Ticks harbor a vast number of pathogenic bacteria, viruses, and protozoa [...]

Published
2023
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14. Observational Cohort Study of Evolving Epidemiologic, Clinical, and Virologic Features of Monkeypox in Southern France

Author

Cassir, Nadim, Cardona, Florian, Tissot-Dupont, Herve, Bruel, Christiane, Doudier, Barbara, Lahouel, Salima, Bendamardji, Karim, Boschi, Celine, Aherfi, Sarah, Edouard, Sophie, Lagier, Jean-Christophe, Colson, Philippe, Gautret, Philippe, Fournier, Pierre-Edouard, Parola, Philippe, Brouqui, Philippe, La-Scola, Bernard, and Million, Matthieu

Subjects
Human monkeypox -- Statistics -- Risk factors -- Diagnosis, Epidemics -- Statistics -- Risk factors -- France, Health
Abstract

Monkeypox virus (MPXV), a zoonotic orthopoxvirus related to smallpox virus, was first described in humans in 1970 in the Democratic Republic of the Congo (1). Sporadic outbreaks of infection have [...]

Published
2022
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32. Variations in respiratory pathogen carriage among a homeless population in a shelter for men in Marseille, France, March–July 2020: cross-sectional 1-day surveys

Author

Ly, Tran Duc Anh, Hoang, Van Thuan, Goumballa, Ndiaw, Louni, Meriem, Canard, Naomie, Dao, Thi Loi, Medkour, Hacene, Borg, Audrey, Bardy, Kevin, Esteves-Vieira, Véra, Filosa, Véronique, Davoust, Bernard, Mediannikov, Oleg, Fournier, Pierre-Edouard, Raoult, Didier, and Gautret, Philippe

Published
2021
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35. Infective Endocarditis in Patients on Chronic Hemodialysis

Author

Clara, Liliana, Sanchez, Marisa, Casabé, José, Cortes, Claudia, Nacinovich, Francisco, Oses, Pablo Fernandez, Ronderos, Ricardo, Sucari, Adriana, Thierer, Jorge, Altclas, Javier, Kogan, Silvia, Spelman, Denis, Athan, Eugene, Harris, Owen, Kennedy, Karina, Tan, Ren, Gordon, David, Papanicolas, Lito, Korman, Tony, Kotsanas, Despina, Dever, Robyn, Jones, Phillip, Konecny, Pam, Lawrence, Richard, Rees, David, Ryan, Suzanne, Feneley, Michael P., Harkness, John, Post, Jeffrey, Reinbott, Porl, Gattringer, Rainer, Wiesbauer, Franz, Andrade, Adriana Ribas, Passos de Brito, Ana Cláudia, Guimarães, Armenio Costa, Grinberg, Max, Mansur, Alfredo José, Siciliano, Rinaldo Focaccia, Varejao Strabelli, Tania Mara, Campos Vieira, Marcelo Luiz, de Medeiros Tranchesi, Regina Aparecida, Paiva, Marcelo Goulart, Fortes, Claudio Querido, de Oliveira Ramos, Auristela, Weksler, Clara, Ferraiuoli, Giovanna, Golebiovski, Wilma, Lamas, Cristiane, Karlowsky, James A., Keynan, Yoav, Morris, Andrew M., Rubinstein, Ethan, Jones, Sandra Braun, Garcia, Patricia, Cereceda, M., Fica, Alberto, Mella, Rodrigo Montagna, Fernandez, Ricardo, Franco, Liliana, Gonzalez, Javier, Jaramillo, Astrid Natalia, Barsic, Bruno, Bukovski, Suzana, Krajinovic, Vladimir, Pangercic, Ana, Rudez, Igor, Vincelj, Josip, Freiberger, Tomas, Pol, Jiri, Zaloudikova, Barbora, Ashour, Zainab, El Kholy, Amani, Mishaal, Marwa, Osama, Dina, Rizk, Hussien, Aissa, Neijla, Alauzet, Corentine, Alla, Francois, Campagnac, CHU Catherine, Doco-Lecompte, Thanh, Selton-Suty, Christine, Casalta, Jean-Paul, Fournier, Pierre-Edouard, Habib, Gilbert, Raoult, Didier, Thuny, Franck, Delahaye, Francois, Delahaye, Armelle, Vandenesch, Francois, Donal, Erwan, Donnio, Pierre Yves, Flecher, Erwan, Michelet, Christian, Revest, Matthieu, Tattevin, Pierre, Chevalier, Florent, Jeu, Antoine, Rémadi, Jean Paul, Rusinaru, Dan, Tribouilloy, Christophe, Bernard, Yvette, Chirouze, Catherine, Hoen, Bruno, Leroy, Joel, Plesiat, Patrick, Naber, Christoph, Neuerburg, Carl, Mazaheri, Bahram, Sophia Athanasia, Carl Neuerburg, Deliolanis, Ioannis, Giamarellou, Helen, Thomas, Tsaganos, Giannitsioti, Efthymia, Mylona, Elena, Paniara, Olga, Papanicolaou, Konstantinos, Pyros, John, Skoutelis, Athanasios, Papanikolaou, Konstantinos, Sharma, Gautam, Francis, Johnson, Nair, Lathi, Thomas, Vinod, Venugopal, Krishnan, Hannan, Margaret M., Hurley, John P., Wanounou, Maor, Gilon, Dan, Israel, Sarah, Korem, Maya, Strahilevitz, Jacob, Durante-Mangoni, Emanuele, Iossa, Domenico, Orlando, Serena, Ursi, Maria Paola, Pafundi, Pia Clara, D’Amico, Fabiana, Bernardo, Mariano, Cuccurullo, Susanna, Dialetto, Giovanni, Covino, Franco Enrico, Manduca, Sabrina, Della Corte, Alessandro, De Feo, Marisa, Tripodi, Marie Françoise, Cecchi, Enrico, De Rosa, Francesco, Forno, Davide, Imazio, Massimo, Trinchero, Rita, Grossi, Paolo, Lattanzio, Mariangela, Toniolo, Antonio, Goglio, Antonio, Raglio, Annibale, Ravasio, Veronica, Rizzi, Marco, Suter, Fredy, Carosi, Giampiero, Magri, Silvia, Signorini, Liana, Kanafani, Zeina, Kanj, Souha S., Sharif-Yakan, Ahmad, Abidin, Imran, Tamin, Syahidah Syed, Martínez, Eduardo Rivera, Soto Nieto, Gabriel Israel, van der Meer, Jan T.M., Chambers, Stephen, Holland, David, Morris, Arthur, Raymond, Nigel, Read, Kerry, Murdoch, David R., Dragulescu, Stefan, Ionac, Adina, Mornos, Cristian, Butkevich, O.M., Chipigina, Natalia, Kirill, Ozerecky, Vadim, Kulichenko, Vinogradova, Tatiana, Edathodu, Jameela, Halim, Magid, Liew, Yee-Yun, Tan, Ru-San, Lejko-Zupanc, Tatjana, Logar, Mateja, Mueller-Premru, Manica, Commerford, Patrick, Commerford, Anita, Deetlefs, Eduan, Hansa, Cass, Ntsekhe, Mpiko, Almela, Manel, Ambrosioni, Juan, Azqueta, Manuel, Brunet, Merce, Castro, Pedro, De Lazzari, Elisa, Falces, Carlos, Fuster, David, Fita, Guillermina, Garcia- de- la- Maria, Cristina, Garcia-Gonzalez, Javier, Gatell, Jose M., Llopis, Jaume, Marco, Francesc, Miró, José M., Moreno, Asuncion, Ortiz, José, Ninot, Salvador, Paré, J. Carlos, Pericas, Juan M., Quintana, Eduard, Ramirez, Jose, Rovira, Irene, Sandoval, Elena, Sitges, Marta, Tellez, Adrian, Tolosana, José M., Vidal, Barbara, Vila, Jordi, Anguera, Ignasi, Font, Bernat, Guma, Joan Raimon, Bermejo, Javier, Bouza, Emilio, Garcia Fernández, Miguel Angel, Gonzalez-Ramallo, Victor, Marín, Mercedes, Muñoz, Patricia, Pedromingo, Miguel, Roda, Jorge, Rodríguez-Créixems, Marta, Solis, Jorge, Almirante, Benito, Fernandez-Hidalgo, Nuria, Tornos, Pilar, de Alarcón, Arístides, Parra, Ricardo, Alestig, Eric, Johansson, Magnus, Olaison, Lars, Snygg-Martin, Ulrika, Pachirat, Orathai, Pachirat, Pimchitra, Pussadhamma, Burabha, Senthong, Vichai, Casey, Anna, Elliott, Tom, Lambert, Peter, Watkin, Richard, Eyton, Christina, Klein, John L., Bradley, Suzanne, Kauffman, Carol, Bedimo, Roger, Chu, Vivian H., Corey, G. Ralph, Crowley, Anna Lisa, Douglas, Pamela, Drew, Laura, Fowler, Vance G., Holland, Thomas, Lalani, Tahaniyat, Mudrick, Daniel, Samad, Zaniab, Sexton, Daniel, Stryjewski, Martin, Wang, Andrew, Woods, Christopher W., Lerakis, Stamatios, Cantey, Robert, Steed, Lisa, Wray, Dannah, Dickerman, Stuart A., Bonilla, Hector, DiPersio, Joseph, Salstrom, Sara-Jane, Baddley, John, Patel, Mukesh, Peterson, Gail, Stancoven, Amy, Levine, Donald, Riddle, Jonathan, Rybak, Michael, Cabell, Christopher H., Pericàs, Juan M., Jiménez-Exposito, Maria Jesús, Kourany, Wissam M., Montagna-Mella, Rodrigo, Mestres, Carlos A., de Lazzari, Elisa, Fowler, Vance G., Jr., and Miró, Jose M.

Published
2021
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36. Screening of SARS-CoV-2 among homeless people, asylum-seekers and other people living in precarious conditions in Marseille, France, March–April 2020

Author

Ly, Tran Duc Anh, Nguyen, Nhu Ngoc, Hoang, Van Thuan, Goumballa, Ndiaw, Louni, Meriem, Canard, Naomie, Dao, Thi Loi, Medkour, Hacene, Borg, Audrey, Bardy, Kevin, Esteves-Vieira, Véra, Filosa, Véronique, Davoust, Bernard, Mediannikov, Oleg, Fournier, Pierre-Edouard, Raoult, Didier, and Gautret, Philippe

Published
2021
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37. Pedobacter ghigonii sp. nov., Isolated from the Microbiota of the Planarian Schmidtea mediterranea

Author

Luis Johnson Kangale, Didier Raoult, and Fournier Pierre-Edouard

Subjects
culturomics, taxono-genomics, Schmidtea mediterranea, Pedobacter ghigonii, Microbiology, QR1-502
Abstract

The planarian S. mediterranea is a platyhelminth with worldwide distribution that can regenerate any part of its body after amputation and has the capacity to eliminate a large spectrum of human bacterial pathogens. Surprisingly, the microbiota of S. mediterranea remains poorly investigated. Using the culturomics strategy to study the bacterial component of planarians, we isolated a new bacterial strain, Marseille-Q2390, which we characterized with the taxono-genomic approach that associates phenotypic assays and genome sequencing and analysis. Strain Marseille-Q2390 exhibited a 16S rRNA sequence similarity of 99.36% with Pedobacter kyungheensis strain THG-T17T, the closest phylogenetic neighbor. It is a white-pigmented, Gram-negative, and rod-shaped bacterium. It grows in aerobic conditions and belongs to the family Sphingobacteriaceae. The genome of strain Marseille-Q2390 is 5,919,359 bp-long, with a G + C content of 40.3%. By comparing its genome with other closely related strains, the highest Orthologous Average Nucleotide Identity (Ortho-ANI) and digital DNA-DNA hybridization (dDDH) values were 85.71% and 30.50%, respectively, which were found with Pedobacter soli strain 15-51T. We conclude that strain Marseille-Q2390T is sufficiently different from other nearby species to be classified within a new species for which we propose the name Pedobacter ghigonii sp. nov.

Published
2021
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45. Rickettsiosis in Denmark: A nation-wide survey

Author

Jensen, Bo Bødker, primary, Andersen, Nanna Skaarup, additional, Wölfel, Silke, additional, Chen, Ming, additional, Paarup, Helene M., additional, Olesen, Carsten Riis, additional, Fournier, Pierre Edouard, additional, Jensen, Per Moestrup, additional, and Skarphedinsson, Sigurdur, additional

Published
2023
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46. COVID-19 in 16 West African Countries: An Assessment of the Epidemiology and Genetic Diversity of SARS-CoV-2 after Four Epidemic Waves

Author

Ndiaye, Anna Julienne Selbé, primary, Beye, Mamadou, additional, Sow, Aissatou, additional, Lo, Gora, additional, Padane, Abdou, additional, Sokhna, Cheikh, additional, Kane, Coumba Touré, additional, Colson, Philippe, additional, Fenollar, Florence, additional, Mboup, Souleymane, additional, and Fournier, Pierre-Edouard, additional

Published
2023
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