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Motivation: Freshwater ecosystems have been heavily impacted by land‐use changes, but data syntheses on these impacts are still limited. Here, we compiled a global database encompassing 241 studies with species abundance data (from multiple biological groups and geographic locations) across sites with different land‐use categories. This compilation will be useful for addressing questions regarding land‐use change and its impact on freshwater biodiversity. Main Types of Variables Contained: The database includes metadata of each study, sites location, sample methods, sample time, land‐use category and abundance of each taxon. Spatial Location and Grain: The database contains data from across the globe, with 85% of the sites having well‐defined geographical coordinates. Major Taxa and Level of Measurement: The database covers all major freshwater biological groups including algae, macrophytes, zooplankton, macroinvertebrates, fish and amphibians. [ABSTRACT FROM AUTHOR]

Despite the importance of freshwater ecosystems to social‐ecological systems of the Amazon, conservation in the region historically has focused on terrestrial ecosystems. Moreover, current information on pressing management and conservation needs specific to freshwaters is scattered across multiple disciplines and generally focused on particular threats, habitats, and taxa. This disparateness of information limits the ability of researchers and practitioners to set priorities and implement actions that comprehensively address challenges faced by freshwater ecosystems. To reduce this research‐implementation gap, we reviewed the scientific literature on Amazon freshwater conservation to identify pressing actions to be taken and potential directions for their implementation. We identified 63 actions gleaned from 174 publications. These were classified into six major themes: (i) implement environmental flows, (ii) improve water quality, (iii) protect and restore critical habitats, (iv) manage exploitation of freshwater organisms, (v) prevent and control invasive species, and (vi) safeguard and restore freshwater connectivity. Although each action may face different implementation challenges, we propose three guiding principles to support action planning and decisions on‐the‐ground. We conclude with a reflection on potential future directions to place freshwaters into the center of policies and agreements that target the conservation of the Amazon. [ABSTRACT FROM AUTHOR]

Environmental DNA (eDNA) metabarcoding has the potential to significantly improve surveys of biodiversity in freshwater systems. However, this methodology is still infrequently used in global hotspots of endemic species, in part because of two major barriers to the success of eDNA metabarcoding: (1) insufficient regional taxonomic representation in public reference sequence databases; and (2) inconsistent species incidence and abundance estimates when compared to conventional surveys.We sampled eDNA and conducted visual surveys in the headwaters of two rivers in the Cape Fold aquatic ecoregion, South Africa. A reference sequence database was generated for the regional diversity of fishes to improve taxonomic classification of endemic species. We also compared the consistency of incidence data and relative abundance estimates of fishes from eDNA metabarcoding sequencing results and visual surveys (snorkel and underwater cameras) at each site sampled.Only 1% of eDNA metabarcoding reads could be classified to fish species without the supplementation of reference sequence databases for local endemic species. Once regional reference sequences were added, a total of nine species were detected and >99% reads classified. A strong positive relationship (Φ = 0.75) was observed between the patterns of detections using eDNA and visual approaches. However, eDNA metabarcoding detected more species than visual methods. In addition, the relative read frequency and abundance observed in visual surveys was significantly correlated (R2 = 0.85–0.88, p < 0.001) in the majority of the small pools surveyed.Incomplete public reference sequence databases hinder the use of eDNA metabarcoding in regions of high endemicity. Local reference sequence libraries can overcome these challenges. When appropriately implemented, eDNA metabarcoding shows promise, producing results consistent or better than the more frequently used and labour‐intensive visual surveys.Efficient survey methods like eDNA metabarcoding are urgently needed to improve aquatic monitoring efforts globally. Understanding how eDNA metabarcoding sequencing results relate to conventional survey methods is a key step in its implementation in ecoregions with high endemicity. [ABSTRACT FROM AUTHOR]

Climate change is causing stream flow regimes to change in many regions globally, including southwestern Australia (SWA) where many perennial streams have switched to intermittent flow regimes. In drier landscapes, ecological refuges and evolutionary refugia will become critical for conserving freshwater biodiversity. This study aimed to determine the contribution of dry season refuges to species persistence and community recovery in a forested headwater catchment where perennial streams have been exposed to severe permanent drying, causing them to become intermittent. That is, in streams where formerly no drought refuges were present.Macroinvertebrate assemblages were sampled in dry season refuges within recently intermittent streams. Refuges included small spring‐fed pools, perched pools and subterranean refuges associated with granite inselbergs. Dry streambeds were searched for organisms aestivating in situ, and sediments were collected from each intermittent stream for rehydration.Mantel tests were used to compare the contribution of refuges to species assemblages in the early wet season when intermittent streams had begun to flow. Analysis of similarities was used to compare patterns between dry and wet season assemblages of intermittent streams and the single remaining perennial stream in the catchment, to infer the contribution of the perennial stream to community recovery in intermittent streams.Refuge types had very different assemblages: spring‐fed refuges supported several locally endemic species, but perched pools were dominated by opportunistic colonists. Several taxa were found aestivating in dry sediments, primarily adult Coleoptera and larval Chironomidae. Inselberg springs supported small populations of endemic Trichoptera and Ephemeroptera and provided subterranean refuge for an endemic amphipod. However, dry season refuges did not significantly contribute to community recovery. Rather, assemblages in early winter flows were similar to those inhabiting the perennial stream, showing that recolonisation from perennial streams is likely the primary process of community recovery in these recently intermittent streams.Newly formed dry season refuges supported some locally endemic species, but also colonising species that were formerly absent (or rare) when all streams were perennial. However, continued loss of perennial streams in SWA will result in landscape‐wide reductions in diversity (as colonisation sources are lost), because there are no known evolutionary refugia in this landscape for relictual species to retreat into. Granite inselbergs may become evolutionary refugia for a few species, as perennial streams are lost.Refuges will likely play a pivotal role in persistence of species able to use them; however, the existence of refuges is also under threat from prolonged climatic drying, including refuges newly formed by stream dry. Thus, identification and protection of future evolutionary refugia is a matter of urgency in regions facing drier climates, as it is ultimately evolutionary refugia that will become critical reservoirs of freshwater biodiversity as perennial streams and refuges are lost. [ABSTRACT FROM AUTHOR]

Climate change is leading to global increases in extreme events, such as drought, that threaten the persistence of freshwater biodiversity. Identification and management of drought refuges, areas that promote resistance and resilience to drought, will be critical for preserving and recovering aquatic biodiversity in the face of climate change and increasing human water use. Although several reviews have addressed the effects of droughts and highlighted the role of refuges, a need remains on how to identify functional refuges that can be used in a drought management framework to support fish assemblages. We synthesize literature on drought refuges and propose a framework to identify and manage functional refuges that incorporate species physiological tolerances, behaviours and life‐history strategies. Stream pools, perennial reaches and off‐channel habitat were identified as important drought refuges for fish. The ability of refuges to improve species resistance and resilience to drought requires careful consideration of the biology of the target species and targeted management to promote persistence, quality and connectivity of refuges. Case studies illustrate that management of drought refuges can be challenging because of competing demands for water, incomplete knowledge of ecological requirements for target species and the increasing occurrence of multi‐year droughts. Climate adaptation is increasingly important, and drought refuges can increase fish resistance and resilience to climate‐related drought across the riverscape. [ABSTRACT FROM AUTHOR]

The long-term monitoring of freshwater ecosystems has been globally recognized for its critical role in preserving natural biodiversity and human well-being over the past century, yet monitoring efforts remain heterogeneously distributed. The Anatolia region in Turkey is known to host three out of the world's 34 biodiversity hotspots, boasting high biodiversity, but is increasingly threatened by anthropogenic effects and invasive freshwater fish species. Although the introduction of non-native fish species and pollution has detrimental effects on different river catchments in this area, long-term biomonitoring studies in Anatolia remain scarce and inconsistent. Collecting information of the Gediz River basin, a major Anatolian river catchment as a model that has been significantly impacted by human activities, published between 1971 and 2023, a total of 21 fish species from 12 families were identified. The spatial and temporal occurrences of these species fluctuated significantly due to heterogeneous sampling efforts that did not follow a clear pattern, indicating a complex ecological and conservation scenario characterized by both spatial and temporal variability in species prevalence, endemism and abundance. The presented results emphasize the need for comprehensive long-term biodiversity monitoring for anthropogenically impacted catchments like the Gediz River basin. Only with a coherent basis of high-resolution monitoring data can the multiple stressors threatening Anatolia's freshwater biodiversity be disentangled and, subsequently, be mitigated. Using the Gediz River basin as an example, this study emphasizes the urgent need for comprehensive, long-term biodiversity monitoring in understudied regions worldwide to protect regional biodiversity and ensure ecosystem health. [ABSTRACT FROM AUTHOR]

This article explores different definitions of river, and in doing so, considers how our efforts to define rivers illuminate aspects of the human condition. Through an exploration of our definitions of river, through the human imagination, in poetry, music, and human's actions, this article considers how our nature is reflected back by rivers—how we in turn are defined by rivers—such as their role in determining borders, movement, escape, the locations of cities, trade, communication, and in the shaping of cultures and societies. This article specifically highlights three definitions of river using examples predominately from North America. River as boundary, exploring how in the reaches of some river basins, rivers act not only as a border, or boundary between two nations or cultures, but also as a line of demarcation between the known and unknown landscapes and the tamed and untamed lands. The definition of river as pathway includes exploration of how the Mississippi River served as a natural highway for people escaping slavery to travel North and reach Underground Railroad routes toward freedom, while also forcibly moving hundreds of thousands of enslaved people in the United States from the Upper South to the Lower South as they were "sold down the river." Third, this article examines how rivers have been defined as a resource through examples, such as the US government and Bonneville Power Administration's (BPA) efforts, to encourage support of large dam construction and water development projects by hiring Woody Guthrie in 1941 to write songs that would prompt public support for the water projects. Through this discussion of three river definitions, the article considers how rivers have been conceptualized over time and how those different knowledges inform our understanding and treatment of rivers. The article argues that it is vital to include knowledge from across scales, time, boundaries, and ways of knowing in order to improve the protection of rivers and their ecosystems. If we do not, we will continue to lose freshwater biodiversity, wetland and riverine habitat, and their immeasurable qualities that inspire life and imagination at a staggering rate. [ABSTRACT FROM AUTHOR]

ABSTRACT Aim Location Methods Results Main Conclusions Human activities pose many challenges to freshwater biodiversity. Among these, is landscape transformation, such as conversion of natural grassland to plantation forestry, impacting both terrestrial and freshwater biodiversity. Functional diversity measures provide substantial information on current and emerging impacts on biological communities, and aid conservation decisions relative to anthropogenic impacts. We determined (1) environmental similarities among 10 freshwater biotope types; (2) whether freshwater biotopes in conservation corridor networks support equal levels of functional richness and divergence compared with an extensive neighbouring protected area; (3) whether certain biotopes are more important for maintaining functional richness and divergence than others; and (4) whether associations between traits and biotope types could be identified.The northeastern coastal region of South Africa.Using dragonflies as model organisms, and data from 140 freshwater lotic and lentic sites, we investigated the distribution of dragonfly traits across a plantation forestry‐natural grassland landscape mosaic with a range of biotope types.Lake sites were different in their environmental conditions compared with the other biotopes. Environmental conditions were variable among the other biotope types and were difficult to distinguish. Freshwater biotopes in the conservation corridors supported equal levels of functional richness and divergence compared with those in the protected area. Overall, dragonfly functional richness and divergence were low at lake sites and wallows, while all other biotopes supported high levels of functional richness and divergence. Trait associations were complex across the waterscape and driven by habitat selection, flight behaviour and ecological sensitivity.Maintaining a mosaic of small lentic and lotic habitats would best support dragonfly conservation in this transformed landscape. A combination of biotopes offers a wide range of environmental conditions essential for conserving the full range of dragonfly traits and species across the region. [ABSTRACT FROM AUTHOR]

Recent decades have witnessed substantial changes in freshwater biodiversity worldwide. Although research has shown that freshwater biodiversity can be shaped by changes in habitat diversity and human‐induced pressure, the potentials for interaction between these drivers and freshwater biodiversity at large spatial extents remain unclear. To address these issues, we employed a spatially extensive multitrophic fish and insect database from 3323 stream sites across the United States, to investigate the ability of habitat diversity to modulate the effect of human pressure on the richness and abundance of fish and insects. We found evidence that high levels of habitat diversity were associated with increased richness and abundance of fish and insects (including whole‐assemblage and individual trophic guilds). We also show that the effects of human pressure on the richness and abundance of fish and insects tend to become positive at high levels of habitat diversity. Where habitat diversity is low, human pressure strongly reduces insect richness and abundance, whereas these reductions are attenuated at high levels of habitat diversity. Structural equation modeling revealed that human pressure reduced habitat diversity, indirectly negatively affecting the richness and abundance of fish and insects. These findings illustrate that, in addition to promoting greater fish and insect biodiversity, habitat diversity may mitigate the deleterious effects of human pressures on these two stream assemblages. Overall, our study suggests that maintaining high levels of habitat diversity is a useful way to protect freshwater biodiversity from ongoing increases in human pressure. However, if human pressures continue to increase, this will reduce habitat diversity, further threatening stream assemblages. [ABSTRACT FROM AUTHOR]

Environmental DNA (eDNA) has emerged as a highly sensitive and efficient tool for the biomonitoring of aquatic ecosystems. In this study, we investigated fish and benthic species communities using eDNA techniques in a medium-sized reservoir (about 3 square kilometers) in Anhui, China. A total of 12 water samples and 11 sediment samples were analyzed by 12S and 18S primers, respectively. We analyzed the composition of species diversity and the effect of seven environmental factors using the Mantel test. A total of 42 fish taxa were present in the water samples, and 188 benthic taxa in the sediment samples. Species composition was different in disparate stations. We found that water temperature and salinity are pivotal factors influencing the composition of fish communities, while chlorophyll-a is a primary environmental determinant for benthic species assembly structures across different zones. Biodiversity information generated by eDNA techniques can be used to reflect the resource status of this reservoir. The relevant results will provide important scientific reference information for the development and exploitation of medium-sized reservoirs. [ABSTRACT FROM AUTHOR]

Biological invasions have caused the loss of freshwater biodiversity worldwide. The interplay between adaptive responses and demographic characteristics of populations impacted by invasions is expected to be important for their resilience, but the interaction between these factors is poorly understood. The freshwater gastropod Amnicola limosus is native to the Upper St. Lawrence River and distributed along a water calcium concentration gradient within which high‐calcium habitats are impacted by an invasive predator fish (Neogobius melanostomus, round goby), whereas low‐calcium habitats provide refuges for the gastropods from the invasive predator. Our objectives were to (1) test for adaptation of A. limosus to the invasive predator and the low‐calcium habitats, and (2) investigate if migrant gastropods could move from refuge populations to declining invaded populations (i.e., demographic rescue), which could also help maintain genetic diversity through gene flow (i.e., genetic rescue). We conducted a laboratory reciprocal transplant of wild F0A. limosus sourced from the two habitat types (high calcium/invaded and low calcium/refuge) to measure adult survival and fecundity in home and transplant treatments of water calcium concentration (low/high) and round goby cue (present/absent). We then applied pooled whole‐genome sequencing of 12 gastropod populations from across the calcium/invasion gradient. We identified patterns of life‐history traits and genetic differentiation across the habitats that are consistent with local adaptation to low‐calcium concentrations in refuge populations and to round goby predation in invaded populations. We also detected restricted gene flow from the low‐calcium refugia towards high‐calcium invaded populations, implying that the potential for demographic and genetic rescue is limited by natural dispersal. Our study highlights the importance of considering the potentially conflicting effects of local adaptation and gene flow for the resilience of populations coping with invasive predators. [ABSTRACT FROM AUTHOR]

Freshwater and terrestrial biodiversity are linked through spatial resource flows. Key examples are detrital subsidies from the riparian vegetation that form the base of food webs in small streams. Despite the central role of detritivores in these food webs, the consequences of altered riparian vegetation type and resource availability on their trophic strategies are less known.Therefore, we experimentally tested direct and indirect effects of riparian vegetation type (i.e. riparian forests present vs. absent) on trophic interactions and dietary imbalances of aquatic detritivores. To characterise trophic strategies, we used stoichiometric and isotopic differences between consumers and resources as functional measures of trophic link strength in leaf litter bags naturally colonised by stream decomposers and detritivores.Our results show that an absence of riparian forests affected stoichiometric and isotopic properties in stream detrital food webs. Where local riparian forests were absent, leaf litter showed lower C:N ratios, which only trichopteran detritivores mirrored, whereas plecopteran and crustacean detritivores showed differences in their isotopic signatures. Diverging patterns between resources and consumers could lead to a rewiring of energy flow paths and weaken the coupling between aquatic detritivores and terrestrial detritus.Consequently, our findings demonstrate that riparian forests are essential for aquatic food webs by not only influencing organisms themselves but also their trophic interactions and energy flow paths. Aquatic detritivores depending on terrestrial subsidies can be highly sensitive to local changes in their resource environment. Therefore, functionally divergent patterns between resources and consumers in recipient systems highlight how habitat properties of the donor system can affect food webs connected across ecosystem boundaries. Read the free Plain Language Summary for this article on the Journal blog. [ABSTRACT FROM AUTHOR]

Freshwater crayfish are amongst the largest macroinvertebrates and play a keystone role in the ecosystems they occupy. Understanding the global distribution of these animals is often hindered due to a paucity of distributional data. Additionally, non-native crayfish introductions are becoming more frequent, which can cause severe environmental and economic impacts. Management decisions related to crayfish and their habitats require accurate, up-to-date distribution data and mapping tools. Such data are currently patchily distributed with limited accessibility and are rarely up-to-date. To address these challenges, we developed a versatile e-portal to host distributional data of freshwater crayfish and their pathogens (using Aphanomyces astaci, the causative agent of the crayfish plague, as the most prominent example). Populated with expert data and operating in near real-time, World of Crayfish™ is a living, publicly available database providing worldwide distributional data sourced by experts in the field. The database offers open access to the data through specialized standard geospatial services (Web Map Service, Web Feature Service) enabling users to view, embed, and download customizable outputs for various applications. The platform is designed to support technical enhancements in the future, with the potential to eventually incorporate various additional features. This tool serves as a step forward towards a modern era of conservation planning and management of freshwater biodiversity. [ABSTRACT FROM AUTHOR]

To identify and mitigate biodiversity decline, it is necessary to develop and implement appropriate ecological assessment methods. This particularly relevant in ecosystems under strong human pressure, such as riverine environments, in which ecological assessment requires several standardized methods useful in a wide range of riverine characteristics and habitats. In this work, we related otter diet composition with a set of environmental variables in representative river reaches of two contiguous river basins with a high diversity of habitats and varying degrees of human alteration. Our goal was to determine to what extent otter prey communities were sensitive to habitat characteristics and human pressures. Our results suggest that otter prey community in heavily anthropized rivers vary significantly across three gradients: habitat productivity, habitat structure and habitat stability. We also compared the results obtained from the otter diet with those obtained from electrofishing. Overall, the otter diet changed spatially in a similar way to the fish community sampled by electrofishing, but both methods showed disagreements that suggest different biases in some habitats and for some species. We conclude that otter diet analysis is a potential supplementary method for assessing river ecological status and that human alterations related to habitat structural simplification and water extraction can prevent freshwater biodiversity recovery in human‐dominated landscapes despite improvements in biochemical water quality. [ABSTRACT FROM AUTHOR]

Freshwater biodiversity in the Maghreb region remains largely unexplored, providing significant opportunities for further discovery. Algerian caddisflies have received relatively little attention. The present study aims to fill gaps in caddisfly taxonomy and distribution by conducting a comprehensive survey of rivers and streams in northeastern Algeria, with a focus on collecting adult caddisflies. Through our research, we identified a total of 28 species from Algeria, and a new caddisfly species, Hydropsyche tenerifa, collected in the Canary Islands, expanding our knowledge of the caddisfly fauna in North Africa. Among these discoveries, we describe 15 new species (H. cherfa, H. makhloufa, H. seybousa, H. algirica, H. dbabcha, H. farrahae, H. guitna, H. chenioura, H. edougha, H. louara, H. vinconi, H. linae, H. nardjissae, Agapetus ferrerasi, A. yasminae) from Algeria and reclassify three subspecies or varieties as distinct species (Wormaldia numidica, Thremma africanum, Mesophylax hoggarensis). In addition, our surveys led to the discovery of three previously unrecorded caddisfly species (Lype reducta, Lepidostoma kumanskii, and Adicella syriaca) in Algeria, as well as the expansion of the known range of seven additional species. These results underscore the importance of the Maghreb's freshwater biodiversity and highlight the need for a more comprehensive understanding of caddisfly taxonomy in the region. By providing a clearer taxonomy and distributional framework for caddisflies, our research establishes a solid foundation for future monitoring and conservation initiatives targeting these important aquatic insects and the ecosystems they inhabit.

ABSTRACT The increase in the frequency and intensity of droughts and heatwaves caused by climate change poses a major threat to biodiversity. In aquatic systems, sedentary species such as freshwater mussels are generally considered more vulnerable to changes in habitat conditions than mobile species such as fish. As mussels provide important ecosystem services, understanding the impacts of drought on freshwater mussels is of particular importance for the management of overall functioning of aquatic ecosystems. We used a comprehensive literature search to provide a systematic overview of direct and indirect effects of drought on freshwater mussels (Bivalvia: Unionida) and an evaluation of mitigation strategies. We found that drought studies were concentrated mostly in the USA, with a focus on the Unionidae family. Topics ranged from the physiological effects of high temperatures, emersion, and hypoxia/anoxia to behavioural and reproductive consequences of drought and the implications for biotic interactions and ecosystem services. Studies spanned all levels of biological organization, from individual responses to population‐ and community‐level impacts and ecosystem‐wide effects. We identified several knowledge gaps, including a paucity of trait‐based evaluation of drought consequences, limited understanding of thermal and desiccation tolerance at the species level, and the synergistic effects of multiple drought stressors on mussels. Although we found many studies provided suggestions concerning management of populations, habitat conditions, and anthropogenic water use, a systematic approach and testing of recommended mitigation strategies is largely lacking, creating challenges for managers aiming to conserve freshwater mussel communities and populations in light of climate change. [ABSTRACT FROM AUTHOR]

Background: Combating infectious diseases and halting biodiversity loss are intertwined challenges crucial to ensure global health. Biodiversity can constrain the spread of vector-borne pathogens circulation, necessitating a deeper understanding of ecological mechanisms underlying this pattern. Our study evaluates the relative importance of biodiversity and the abundance of Bulinus truncatus, a major intermediate host for the trematode Schistosoma haematobium on the circulation of this human pathogen at aquatic transmission sites. Methods: We combined mathematical modelling and a molecular based empirical study to specifically assess the effect of co-infections between S. haematobium and other trematodes within their B. truncatus snail hosts; and B. truncatus abundance at transmission sites, on the production of S. haematobium infective cercariae stages released into the aquatic environment. Results: Our modelling approach shows that more competitive trematode species exploiting B. truncatus as an intermediate host at the transmission site level leads to higher co-infection rates within snail hosts, subsequently reducing the production of S. haematobium cercariae. Conversely, an increase in B. truncatus abundance results in lower co-infection rates, and a higher proportion of S. haematobium cercariae released into the environment. Our empirical data from the field support these findings, indicating a significant negative effect of local trematode species richness (P-value = 0.029; AIC = 14.9) and co-infection rates (P-value = 0.02, AIC = 17.4) on the dominance of S. haematobium based on our GLMM models, while B. truncatus abundance positively influences S. haematobium dominance (P-value = 0.047, AIC = 20.1). Conclusions: Our study highlights the importance of biodiversity in influencing the transmission of S. haematobium through the effect of antagonistic interactions between trematodes within bulinid snail hosts. This effect intensifies when B. truncatus populations are low, promoting co-infections within snails. In line with the One Health concept, our results suggest that maintaining high level of freshwater biodiversity to sustain global trematode diversity at transmission sites can help reducing the circulation of Schistosoma species locally. [ABSTRACT FROM AUTHOR]

Biological invasions pose a global challenge, threatening both biodiversity and human well-being. Projections suggest that as invasions increase, the financial costs associated with management and the ecological harm they cause will also escalate. Here, we examined whether long-term biomonitoring strategies were adequate to identify and track benthic aquatic non-native macroinvertebrate species by using the German subset (151 time series; 129 of which reported non-native species) of the currently most comprehensive European long-term dataset of 1816 macroinvertebrate community time series from 22 European countries. The detection of aquatic non-native species was directly linked to the availability of long-term sites and thus, monitoring effort, having identified the spatio-temporal occurrence of 32 non-native species. The available long-term monitoring site data were mostly concentrated in the western part of Germany, predominantly covering the Rhine River and its tributaries. The spatially biased network of long-term monitoring sites, therefore, naturally skews the detection and reporting of aquatic non-native species toward this area and underestimates Eastern and Southern regions, impeding the comprehension of invasion dynamics. However, based on the available data, we found that the absolute number of non-native species increased and the proportion of non-native species relative to native species decreased over time. This indicates complex ecological interactions between native and non-native species and underlines the value of long-term data for investigating invasion dynamics. Considering the value of comprehensive monitoring networks, a spatially biased network delays the application of management and mitigation plans, possibly worsening the ecological and economic effects of biological invasions in Germany. The results provided here indicate the disadvantages of biased datasets, but simultaneously underline the enormous potential of a dense network of long-term monitoring. Our results also highlight the urgent need to increase and diversify long-term biomonitoring efforts throughout Germany to cover the main freshwater resources and their connections where the introduction risk of non-native species is the highest. Centrally collating such data would provide a profound basis for the monitoring of spreading aquatic non-native species and could serve the implementation of national biosecurity efforts. [ABSTRACT FROM AUTHOR]

Freshwater ecosystems are crucial for global biodiversity through supporting plant and animal species and providing essential resources. These ecosystems are under significant threat, particularly in island environments such as Madagascar. Our study focuses on the Amboaboa River basin, home to the rare and endemic fish species Rheocles derhami, last recorded in 2013. To assess the status of this and other threatened fish species including Ptychochromis insolitus and Paretroplus gymnopreopercularis, and to understand freshwater fish population dynamics in this biodiversity hotspot, we conducted a comprehensive survey using both environmental DNA (eDNA) and traditional fishing methods. While traditional methods effectively captured a diverse range of species, including several invasive aliens and the critically endangered endemic species that were the focus of this study, the eDNA approach detected only a fraction of these introduced species and struggled to identify some critically endangered endemics at the species level. This highlights the value of combining methods to enhance species detection. We also investigated the trade-offs associated with multi-primer assessments in eDNA analysis, focusing on three different primer combinations targeting the 12S mitochondrial gene: MiFish, Tele02, and Riaz. Additionally, we provided 12S reference barcodes for 10 species across 9 genera of fishes from the region to increase the coverage of the public reference databases. Overall, our study elucidates the current state of freshwater biodiversity in the Amboaboa River basin and underscores the value of employing multiple methods for effective conservation strategies. [ABSTRACT FROM AUTHOR]

Climate change is interacting with water resource pressures to alter the frequency, severity and spatial extent of drought, which can thus no longer be considered a purely natural hazard. Although particularly severe ecological impacts of drought have occurred in drylands, its effects on temperate ecosystems, including rivers, are also considerable. Extensive research spanning a diverse range of UK rivers offers an opportunity to place the effects of past drought in the context of intensifying climate change and to examine the likely effects of future drought in a typically cool, wet country. Here, drought manifests instream as deficits in surface water, modified flow velocities, and—increasingly—partial or complete drying of previously perennial and naturally non‐perennial reaches. As a result, drought causes declines in the taxonomic and functional biodiversity of freshwater communities including microorganisms, algae, plants, invertebrates and fish, altering ecological processes and associated benefits to people. Although freshwater communities have typically recovered quickly after previous UK droughts, an increase in drought extremity may compromise recovery following future events. The risk of droughts that push ecosystems beyond thresholds to persistent, species‐poor, functionally simplified states is increasing. Research and monitoring are needed to enable timely identification of rivers approaching such thresholds and thus to inform interventions that pull these ecosystems back from the brink. Management actions that support natural flow regimes and promote natural processes that diversify instream habitats, including drought refuges, are also crucial to support biodiversity within functional river ecosystems as they adapt to a changing world. This article is categorized under:Water and Life > Nature of Freshwater EcosystemsWater and Life > Stresses and Pressures on EcosystemsWater and Life > Conservation, Management, and Awareness [ABSTRACT FROM AUTHOR]

Hydropower expansion is increasingly responsible for connectivity and biodiversity loss in freshwater ecosystems. The Amazon basin, which supports the highest level of freshwater biodiversity globally, faces such unplanned expansion. Here, we demonstrate and quantify the impacts of two major hydroelectric dams on the Madeira River on the trans‐Amazonian movements of one apex predatory catfish (Brachyplatystoma rousseauxii) performing the longest migration known in freshwaters. Using otolith microchemistry, we show that above the dams, the former basin‐wide homing migration between the breeding grounds in the upper Madeira and the nursery in the Amazon estuary has now been replaced by residency. We found evidence suggesting downstream migration of juvenile fish past dams into the Amazon estuary and that some of them home back to the Madeira. However, we did not find evidence that the fish homing back from the estuary can access their breeding grounds in the upper Madeira; they remain blocked below the dams. Our results provide undisputable evidence that the conservation of the species primarily requires the reestablishment of connectivity with the construction of efficient fishways. [ABSTRACT FROM AUTHOR]

Multiple anthropogenic forces have pushed river ecosystems into undesirable states with no clear understanding of how they should be best managed. The advancement of riverine fish habitat models intended to provide management insights has slowed. Investigations into theoretical and empirical gaps to define habitat more comprehensively across different scales and ecological organizations are crucial in managing the freshwater biodiversity crisis. We introduce the concept of novel riverscapes to reconcile anthropogenic forcing, fish habitat, limitations of current fish habitat models, and opportunities for new models. We outline three priority data-driven opportunities that incorporate the novel riverscape concept: fish movement, river behavior, and drivers of novelty that all are integrated into a scale-based framework to guide the development of new models. Last, we present a case study showing how researchers, model developers, and practitioners can work collaboratively to implement the novel riverscape concept. [ABSTRACT FROM AUTHOR]

The present study examined for the first time both length–to–weight relationships and condition factors of ten species belonging to three endemically rich genera: Alburnoides (nspecimens = 361), Alburnus (nspecimens = 36), and Squalius (nspecimens = 205). Fish were sampled in several lakes and streams using electroshocking. Fish samples ranged from 3.60 cm to 27.40 cm in total length and from 38.00 g to 250.02 g in total weight. The coefficient of determination for all populations was R2 ≥ 0.95, while the b value varied between 3.0158 and 3.4957 for all sampling locations. The latter ranged from 3.0158 to 3.4957 for Alburnoides, from 3.0357 to 3.2327 for Alburnus, and from 3.0743 to 3.2143 for Squalius populations. Fulton's condition factor was calculated for all populations. The research presented here focused on data-deficient endemic and native species of Anatolian freshwater resources, and the results obtained may prove useful in biodiversity management strategies. [ABSTRACT FROM AUTHOR]

The Yangtze River is one of the largest riverine ecosystems in the world and is a biodiversity hotspot. In recent years, this river ecosystem has undergone rapid habitat deterioration due to anthropogenic disturbances, leading to a decrease in freshwater biodiversity. Owing to these anthropogenic impacts, the Chinese government imposed a "Ten‐year fishing ban" (TYFB) in the Yangtze River and its tributaries. Ecological changes associated with this decision have not been documented to evaluate the level of success. This study evaluates the success of the TYFB by analyzing the changes in phytoplankton communities and comparing them to periods before the TYFB was imposed. A total of 325 phytoplankton species belonging to 7 phyla and 103 genera dominated by Chlorophyceae and Bacillariophyceae were identified. Species diversity according to the Shannon–Wiener ranged between 1.19 and 3.00. The results indicated that phytoplankton diversity increased, while both density and biomass decreased after the TYFB. The health of the aquatic ecosystem appeared to have improved after the TYFB, as indicated by the phytoplankton‐based index of biotic integrity. Significant seasonal and spatial differences were found among the number of species, density, and biomass of phytoplankton, where these differences were correlated with pH, water depth, chlorophyll‐a, permanganate index, transparency, copper, ammonia nitrogen, and total phosphorus based on redundancy analysis. Results from this study indicate that the TYFB played an important role in the restoration of freshwater ecosystem in the Yangtze River and its tributaries. [ABSTRACT FROM AUTHOR]

Conservation translocations may be a useful tool for the restoration of declining freshwater invertebrates, but they are poorly represented in the literature. We conducted a before‐after/control‐impact (BACI) experiment to test the efficacy of conservation translocation for re‐establishing abundant populations of the amphipod Gammarus lacustris, a declining species and wildlife food resource in depressional wetlands in the upper Midwest of the United States of America. Each study site (n = 19) contained at least one treatment wetland receiving translocated G. lacustris from a local donor and one control wetland. We selected study wetlands based on a suite of wetland characteristics and randomly assigned recipient versus control treatment. Gammarus lacustris was detected post‐translocation at only 2 of 22 recipient wetlands (1 of 19 sites). Overall, there was a statistical increase in G. lacustris density in recipient wetlands compared to controls; however, the results were of minimal biological significance due to being driven by a single site with low G. lacustris densities. Accordingly, our results suggest that future conservation translocations of amphipods might be successful if limited to recently restored wetlands or informed by a more complex habitat suitability model to differentiate dispersal limitations from habitat limitations. To develop such a model would involve identifying the fewest, most influential physical and biological factors (e.g. wetland size/structure, fish, aquatic vegetation, and water chemistry) from the numerous inter‐related factors that correlate with the abundance of naturally occurring G. lacustris; candidate wetlands to receive amphipods would be those for which the model predicts abundant G. lacustris but in which they do not presently occur. [ABSTRACT FROM AUTHOR]

Simple Summary: Freshwater mussels create habitat, filter water, and enhance food webs, but they are also among the world's most imperiled taxa. Conservation efforts largely rely on captive propagation in which mussels are grown in protected aquaculture environments (hatcheries) for later release. Recent evidence has highlighted the importance of pathogens in population losses of freshwater mussels. In response to ongoing mass mortality events of freshwater mussels in the Upper Tennessee River Basin in Virginia and Tennessee, USA, we conducted a multi-year study to document viruses across multiple restoration sites and compare them to viruses in mussels from the hatchery. Viral communities changed greatly after mussels were released. Of the 681 viruses of the 27 families we documented, only 20 viruses were found exclusively in hatchery mussels, compared to 451 viruses found only in mussels stocked to the wild. After release, mussels rapidly acquired new viruses, and the number of viruses increased steadily over time. These findings have implications for how mussel introduction programs might be managed for greater success, for example, by incorporating acclimatization periods prior to full release. Freshwater mussels (order: Unionida) are highly imperiled globally and are increasingly the focus of captive propagation efforts to protect and restore wild populations. The Upper Tennessee River Basin (UTRB) in Virginia is a freshwater biodiversity hotspot hosting at least 45 of North America's ~300 species of freshwater mussels, including 21 threatened and endangered species listed under the U.S. Endangered Species Act. Recent studies have documented that viruses and other microbes have contributed to freshwater mussel population declines in the UTRB. We conducted a multi-year longitudinal study of captive-reared hatchery mussels released to restoration sites throughout the UTRB to evaluate their viromes and compare them to captive hatchery environments. We documented 681 viruses from 27 families. The hatchery mussels had significantly less viruses than those deployed to wild sites, with only 20 viruses unique to the hatchery mussels. After the hatchery mussels were released into the wild, their number of viruses initially spiked and then increased steadily over time, with 451 viruses in total unique to the mussels in the wild. We found Clinch densovirus 1 (CDNV-1), a virus previously associated with mass mortality events in the Clinch River, in all samples, but the wild site mussels consistently had significantly higher CDNV-1 levels than those held in the hatchery. Our data document substantial differences between the viruses in the mussels in the hatchery and wild environments and rapid virome shifts after the mussels are released to the wild sites. These findings indicate that mussel release programs might benefit from acclimatization periods or other measures to mitigate the potential negative effects of rapid exposure to infectious agents found in natural environments. [ABSTRACT FROM AUTHOR]

Freshwater biodiversity is under great threat across the globe as evidenced by more severe declines relative to other types of ecosystems. Some of the main stressors responsible for these concerning trends is habitat fragmentation, degradation, and loss stemming from anthropogenic activities, including energy production, urbanization, agriculture, and resource extraction. Habitat protection and restoration both play an integral role in efforts to save freshwater biodiversity and associated ecosystem services from further decline. In this paper, we summarize the sources of threats associated with habitat fragmentation, degradation, and loss and then outline response options to protect and restore freshwater habitats. Specific response options are to legislate the protection of healthy and productive freshwater ecosystems, prioritize habitats for protection and restoration, enact durable protections, conserve habitat in a coordinated and integrated manner, engage in evidence-based restoration using an adaptive management approach, ensure that potential freshwater habitat alterations are mitigated or off-set, and future-proof protection and restoration actions. Such work should be done through a lens that engages and involves local community members. We identify three broad categories of obstacles that could arise during the implementation of the response options outlined: (a) scientific (e.g., inaccessible data or uncertainties), (b) institutional and management (e.g., capacity issues or differing goals across agencies), and (c) social and political (e.g., prioritizing economic development over conservation initiatives). The protection and restoration of habitats is key to Bend the Curve for freshwater biodiversity, with a comprehensive, connected, and coordinated effort of response options needed to protect intact habitats and restore fragmented, degraded, and lost habitats and the biodiversity and ecosystem services that they support. [ABSTRACT FROM AUTHOR]

Environmental flows (e-flows) aim to mitigate the threat of altered hydrological regimes in river systems and connected waterbodies and are an important component of integrated strategies to address multiple threats to freshwater biodiversity. Expanding and accelerating implementation of e-flows can support river conservation and help to restore the biodiversity and resilience of hydrologically altered and water-stressed rivers and connected freshwater ecosystems. While there have been significant developments in e-flow science, assessment, and societal acceptance, implementation of e-flows within water resource management has been slower than required and geographically uneven. This review explores critical factors that enable successful e-flow implementation and biodiversity outcomes in particular, drawing on 13 case studies and the literature. It presents e-flow implementation as an adaptive management cycle enabled by 10 factors: legislation and governance, financial and human resourcing, stakeholder engagement and co-production of knowledge, collaborative monitoring of ecological and social-economic outcomes, capacity training and research, exploration of trade-offs among water users, removing or retrofitting water infrastructure to facilitate e-flows and connectivity, and adaptation to climate change. Recognising that there may be barriers and limitations to the full and effective enablement of each factor, the authors have identified corresponding options and generalizable recommendations for actions to overcome prominent constraints, drawing on the case studies and wider literature. The urgency of addressing flow-related freshwater biodiversity loss demands collaborative networks to train and empower a new generation of e-flow practitioners equipped with the latest tools and insights to lead adaptive environmental water management globally. Mainstreaming e-flows within conservation planning, integrated water resource management, river restoration strategies, and adaptations to climate change is imperative. The policy drivers and associated funding commitments of the Kunming–Montreal Global Biodiversity Framework offer crucial opportunities to achieve the human benefits contributed by e-flows as nature-based solutions, such as flood risk management, floodplain fisheries restoration, and increased river resilience to climate change. [ABSTRACT FROM AUTHOR]

For millennia humans have extracted biological and physical resources from the planet to sustain societies and enable the development of technology and infrastructure. Growth in the human population and changing consumption patterns have increased the human footprint on ecosystems and their biodiversity, including in fresh waters. Freshwater ecosystems and biodiversity face many threats and it is now widely accepted that we are in a biodiversity crisis. One means of protecting and restoring freshwater biodiversity is to better manage the exploitation of freshwater biota and aggregate resources (e.g., sand, gravel, and boulders). Here we outline the threats arising from such exploitation and identify response options to ensure that methods and levels of extraction are sustainable and allow recovery of over-exploited freshwater biodiversity and ecosystems. The guidance we provide will enable practitioners, policy-makers, and resource stewards to embrace effective, sustainable, and evidence-based approaches to resource extraction. Response options for managing species exploitation include strengthening assessment and reporting, using science-based approaches to reduce overexploitation and support recovery, embracing community engagement, and building or tightening legislation. Response options for managing exploitation of freshwater aggregate resources include reducing demand for harvest, strengthening governance, reporting, and monitoring of environmental impacts, and promoting the restoration of degraded ecosystems or compensating for losses. Diverse case studies highlight examples of where various management actions have been implemented in an effort to consider how they can be scaled up and adapted to other contexts. Managing exploitation will be a key aspect of broader initiatives needed to protect and restore freshwater biodiversity around the globe. [ABSTRACT FROM AUTHOR]

Freshwater biodiversity loss is accelerating globally, but humanity can change this trajectory through actions that enable recovery. To be successful, these actions require coordination and planning at a global scale. The Emergency Recovery Plan for global freshwater biodiversity aims to reduce the risk for freshwater biodiversity loss through six priority actions: (1) accelerate implementation of environmental flows; (2) improve water quality to sustain aquatic life; (3) protect and restore critical habitats; (4) manage exploitation of freshwater species and riverine aggregates; (5) prevent and control nonnative species invasions in freshwater habitats; and (6) safeguard and restore freshwater connectivity. These actions can be implemented using future-proofing approaches that anticipate future risks (e.g., emerging pollutants, new invaders, and synergistic effects) and minimize likely stressors to make conservation of freshwater biodiversity more resilient to climate change and other global environmental challenges. While uncertainty with respect to past observations is not a new concern for freshwater biodiversity, future-proofing has the distinction of accounting for the uncertainty of future conditions that have no historical baseline. The level of uncertainty with respect to future conditions is unprecedented. Future-proofing of the Emergency Recovery Plan for freshwater biodiversity will require anticipating future changes and developing and implementing actions to address those future changes. Here, we showcase future-proofing approaches likely to be successful using local case studies and examples. Ensuring that response options within the Emergency Recovery Plan are future-proofed will provide decision makers with science-informed choices, even in the face of uncertain and potentially new future conditions. We are at an inflection point for global freshwater biodiversity loss; learning from defeats and successes can support improved actions toward a sustainable future. [ABSTRACT FROM AUTHOR]

ABSTRACT Freshwater biodiversity conservation has received substantial attention in the scientific literature and is finally being recognized in policy frameworks such as the Global Biodiversity Framework and its associated targets for 2030. This is important progress. Nonetheless, freshwater species continue to be confronted with high levels of imperilment and widespread ecosystem degradation. An Emergency Recovery Plan (ERP) proposed in 2020 comprises six measures intended to “bend the curve” of freshwater biodiversity loss, if they are widely adopted and adequately supported. We review evidence suggesting that the combined intensity of persistent and emerging threats to freshwater biodiversity has become so serious that current and projected efforts to preserve, protect and restore inland‐water ecosystems may be insufficient to avert substantial biodiversity losses in the coming decades. In particular, climate change, with its complex and harmful impacts, will frustrate attempts to prevent biodiversity losses from freshwater ecosystems already affected by multiple threats. Interactions among these threats will limit recovery of populations and exacerbate declines resulting in local or even global extinctions, especially among low‐viability populations in degraded or fragmented ecosystems. In addition to impediments represented by climate change, we identify several other areas where the absolute scarcity of fresh water, inadequate scientific information or predictive capacity, and a widespread failure to mitigate anthropogenic stressors, are liable to set limits on the recovery of freshwater biodiversity. Implementation of the ERP rapidly and at scale through many widely dispersed local actions focused on regions of high freshwater biodiversity and intense threat, together with an intensification of ex‐situ conservation efforts, will be necessary to preserve native freshwater biodiversity during an increasingly uncertain climatic future in which poorly understood, emergent and interacting threats have become more influential. But implementation of the ERP must be accompanied by measures that will improve water, energy and food security for humans – without further compromising the condition of freshwater ecosystems. Unfortunately, the inadequate political implementation of policies to arrest widely recognized environmental challenges such as climate change do not inspire confidence about the possible success of the ERP. In many parts of the world, the Anthropocene future seems certain to include extended periods with an absolute scarcity of uncontaminated surface runoff that will inevitably be appropriated by humans. Unless there is a step‐change in societal awareness of – and commitment to – the conservation of freshwater biodiversity, together with necessary actions to arrest climate change, implementation of established methods for protecting freshwater biodiversity may not bend the curve enough to prevent continued ecosystem degradation and species loss. [ABSTRACT FROM AUTHOR]

Aquatic invasive species are a significant threat to global freshwater biodiversity. This study focuses on the banded mystery snail, Callinina georgiana, an invasive species in the Adirondack region of northern New York—an important section of the New York Great Lakes Basin. This project aims to explore the genetic connectivity of C. georgiana within its invasive range using a combination of mitochondrial and nuclear markers.Sampling was conducted in the Raquette River and adjacent waterways, with a total of 229 snails collected from 16 distinct populations distributed across eight different waterbodies. Also included were two populations from the species' native range in the southern U.S.A. DNA was extracted, and a 710‐bp fragment of the mitochondrial DNA marker cytochrome c oxidase 1 and a 351‐bp fragment of nuclear marker histone‐3 were amplified. Population genetic analyses including haplotype patterning, AMOVA and genetic diversity estimates, neutrality tests and tests for isolation by distance were performed to assess connectivity patterns.Results showed moderate to high levels of genetic admixture within the snail's invasive range as indicated by the lack of geographic patterning of haplotypes and low to moderate levels of genetic differentiation across multiple sites. Demographic analyses combined with high numbers of private haplotypes indicate historic population expansion. Interestingly, a case of mitonuclear discordance was detected for native and invasive populations as evident by incongruent haplotype patterns for the cytochrome c oxidase 1 and histone‐3 markers.Callinina georgiana exhibits a high level of genetic connectivity in its invasive range. The presence of dams does not significantly affect apparent gene flow, indicating that anthropogenic activities, such as boat traffic might be key in dispersing the snails across this fragmented freshwater system.This study offers new insights into the dispersal and genetic structure of an invasive freshwater snail. It highlights the importance of considering anthropogenic factors when confronting complex patterns of genetic diversity. The findings are significant for biodiversity conservation and provide a basis for developing strategies to manage and contain the spread of aquatic invasive species such as C. georgiana, especially in regions with high human activity. [ABSTRACT FROM AUTHOR]

Streamflow regimes that maintain vital functions and processes of aquatic ecosystems are critical to sustaining ecosystem health. In rivers with altered flow regimes, restoring components of the natural flow regime is predicted to conserve freshwater biodiversity by supporting ecological functions and geomorphological processes to which native communities are adapted. However, the effectiveness of environmental flow restoration is poorly understood because of inadequate monitoring and uncertainty in ecological responses to managed changes in specific, quantifiable aspects of the annual streamflow regime. Here, we used time series models to analyze 25 years of fish assemblage data collected before and after environmental flow implementation in a dammed river in California, USA. We examined the response of the fish community to changes in individual components of the flow regime known to support ecosystem functions. We found that as functional flow components shifted toward their predicted natural range, the quasi‐extinction risk (likelihood of population declines of >80%) decreased for the native fish assemblage. Following environmental flow implementation, observed changes toward natural ranges of dry season duration, fall pulse flow magnitude, and wet season timing each reduced quasi‐extinction risk by at least 40% for the native assemblage. However, functional flow components that shifted away from their predicted natural range, including lower spring recession flows and higher dry season baseflow, resulted in greater quasi‐extinction risk for native species. In contrast, non‐native species decreased in abundance when flow components shifted toward predicted natural ranges and increased when components shifted away from their natural range. Although most functional flow components remained outside of their natural range following environmental flow implementation, our results indicate that even moderate shifts toward a natural flow regime can benefit native and suppress non‐native fish species. Overall, this study provides the most compelling evidence to date of the effectiveness of functional environmental flows in supporting native fish recovery in a highly regulated river. [ABSTRACT FROM AUTHOR]

Freshwater species biodiversity is under threat. The average global decline for migratory fish species is estimated to be more than 75% since 1970. Atlantic salmon is one of these species with a steep decline in north‐western Europe and it even went extinct in the river Rhine in the 1950s. The causes for this decline have been posted to habitat loss, pollution, climate change and overfishing. Annual stocking in the Rhine since the late 1980s resulted in an initial increase in the Atlantic salmon numbers after which numbers collapsed again. In this paper, we lay out the recent decline, estimate losses of smolts and adults at different sections in the freshwater habitat and elaborate on potential causes of the recent decline and these losses. We found that the salmon population of the river Rhine has declined rapidly over the past two decades, with a current estimated spawning population of only ~350–800 individuals. The percentage of salmon smolts returning as adults to spawning grounds is estimated at 0.5%–0.6%, well below the 3% supposedly needed to maintain a self‐sustaining population. Many individuals disappear during their migrations, with the highest percentage of smolts disappearing in the German tributaries (44%) and the Dutch lower Rhine (71%), while the percentage of disappearing adults is highest in both the Dutch (74%) and the German (78%) Rhine. Causes for the losses per river section remain unclear and possible threats, some specific to the river Rhine, are being discussed. The large losses of smolts and adults in inland waters, compared with open sea losses, indicate that restocking the river Rhine might only result in a self‐sustaining population with more ecological restoration than carried out so far along the intensively shipped and highly regulated river course and associated high levels of predation, and might be increasingly limited by future climate change. [ABSTRACT FROM AUTHOR]

To face the current downward trajectory of freshwater biodiversity loss, the implementation of effective biodiversity monitoring programs is of utmost importance. Environmental DNA offers unprecedented opportunities for this aim but several challenges still need to be addressed before implementing efficient species monitoring using eDNA. One of them is optimizing the eDNA sampling scheme to maximize the eDNA detection probability. For instance, in flowing freshwaters, the transport of eDNA downstream from its source can impact the eDNA detection probability, and blur the link between eDNA detection and the local occurrence of the species. Here, we investigated the eDNA spatial range of Harttiella lucifer (Siluriformes, Loricariidae), a threatened neotropical siluriform fish inhabiting French Guianese mountain streams, and confined to waterfalls and fast‐flowing environments. Environmental samples were collected at 11 sites from the H. lucifer population to 2000 m downstream. A species‐specific dPCR approach was applied to quantify the amount of DNA present in each sample and evaluate the eDNA detection probability of H. lucifer according to the distance from its source. Results showed an accumulation of eDNA at 50 and 100 m downstream from H. lucifer population. The evaluation of detection probabilities revealed that 300 m downstream from H. lucifer population, the probability of detection drops to 50%. This study suggests that eDNA drift in neotropical small streams is limited to a few tens meters downstream. These findings demonstrate that in neotropical small streams, eDNA provides a picture of the local fish fauna rather than integrating information over large spatial scales. [ABSTRACT FROM AUTHOR]

Freshwater habitats in Indo-Pacific tropical islands are mainly inhabited by amphidromous fish, which display a marine larval phase while the rest of their life cycle takes place in rivers. Gobiiformes are the most diversified fish component in these ecosystems. In this study, we focused on the status of the widespread Stenogobius genus (Gobioidei). This genus is distributed from the Indian Ocean to French Polynesia. Recently, a first revision of Stenogobius was undertaken leading to the redescription of S. genivittatus (Valenciennes, 1837) and the placement of 12 species names as synonyms of this species. This paper focuses on the status of nine Stenogobius species supposedly present in Indonesia, a country well known as one of the freshwater hotspots of biodiversity. The present study is based on 95 specimens, and includes morphomeristic data and partial mitochondrial COI sequences. Our results show that, at least four species occur in Indonesia, including the widespread species S. genivittatus. [ABSTRACT FROM AUTHOR]

Freshwater mussels are integral components of riverine ecosystems, influencing water quality, nutrient cycling, and habitat characteristics. Enigmatic freshwater mussel declines, often characterized by sudden mass mortality events, pose significant challenges to conservation efforts. The Clinch River, a freshwater biodiversity hotspot in Virginia and Tennessee, USA, has experienced several enigmatic mass mortality events since 2016. Studies have reported bacteria associated with moribund Pheasantshell (Actinonaias pectorosa) during mortality events in the Clinch River, specifically Yokenella regensburgei. Despite reports of bacterial infection, little is known about their role as pathogens. Through a multiyear case-control study, combining in-situ experiments, field surveys, histology, bacterial isolation, and high-throughput sequencing, we assessed the role of bacteria in Pheasantshell (Actinonais pectorosa) mortality at three sites in the Clinch River. Between May 2021 and December 2023, we collected 21 wild moribund free-living A. pectorosa and 68 hatchery-reared A. pectorosa maintained in silos at the same sites and investigated differences in pathology and microbiologye between groups. No silo mussels presented clinical signs of disease, or gross or microscopic lesions associated with pathological conditions leading to mortality. Our findings reveal a significant association between Yokenella regensburgei and severe multisystemic and multifocal infiltrative hemocytosis with necrosis, consistent with sepsis. Lesions associated with yokenellosis were of sufficient severity and physiological significance to explain mortality in infected hosts. Although our study does not explain the cause of these infections, it confirms that mussels at our study sites are ultimately dying with an infectious disease and that Y. regensburgei can be pathogenic in free-living mussels. Our results underscore the importance of considering bacterial diseases in wild mussel populations and emphasize the need for further research to elucidate the epidemiology and pathogenicity of Y. regensburgei. Overall, our study highlights the importance of integrated approaches combining pathology, microbiology, and epidemiology in freshwater mussel conservation efforts. [ABSTRACT FROM AUTHOR]

The barbel chub (Squaliobarbus curriculus), the only species in the genus, is widely distributed in freshwater lakes and rivers at different latitudes in East Asia, with fishery and biodiversity importance, and is an emerging commercially important fish in China. However, the resource of this species has dramatically declined due to anthropogenic activities such as over-exploitation, as well as water pollution. Genomic resources for S. curriculus are useful for the management and sustainable utilization of this important fish species, and also for a better understanding of its genetic variation in the region. Here, we report the chromosome-level assembly of the S. curriculus genome obtained from the integration of PacBio long sequencing and Hi-C technology. A total of 155.34 Gb high-quality PacBio sequences were generated, and the preliminary genome assembly was 894.95 Mb in size with a contig N50 being 20.34 Mb. By using Hi-C data, 99.42% of the assembled sequences were anchored to 24 pseudochromosomes, with chromosome lengths ranging from 27.22 to 58.75 Mb. A total of 25,779 protein-coding genes were predicted, 94.70% of which were functionally annotated. Moreover, S. curriculus shows resistance to grass carp haemorrhagic disease (GCHD) caused by grass carp reovirus (GCRV), which seriously hinders the status and future perspectives of commercial grass carp production. Phylogenetic analysis indicated that S. curriculus diverged with grass carp (Ctenopharyngodon idellus) approximately 20.80 million years ago. Annotations of the expanded gene families were found to be largely enriched in immune-related KEGG pathway categories. Moreover, a total of 18 Toll-like receptor (TLR) genes were identified from the whole genome of S. curriculus. The high-quality genome assembled in this study will provide a valuable resource for accelerating ecological, evolutionary, and genetic research on S. curriculus. [ABSTRACT FROM AUTHOR]

ABSTRACT Chemical pollutants and/or climate change have the potential to break down reproductive barriers between species and facilitate hybridization. Hybrid zones may arise in response to environmental gradients and secondary contact between formerly allopatric populations, or due to the introduction of non‐native species. In freshwater ecosystems, field observations indicate that changes in water quality and chemistry, due to pollution and climate change, are correlated with an increased frequency of hybridization. Physical and chemical disturbances of water quality can alter the sensory environment, thereby affecting chemical and visual communication among fish. Moreover, multiple chemical compounds (e.g. pharmaceuticals, metals, pesticides, and industrial contaminants) may impair fish physiology, potentially affecting phenotypic traits relevant for mate selection (e.g. pheromone production, courtship, and coloration). Although warming waters have led to documented range shifts, and chemical pollution is ubiquitous in freshwater ecosystems, few studies have tested hypotheses about how these stressors may facilitate hybridization and what this means for biodiversity and species conservation. Through a systematic literature review across disciplines (i.e. ecotoxicology and evolutionary biology), we evaluate the biological interactions, toxic mechanisms, and roles of physical and chemical environmental stressors (i.e. chemical pollution and climate change) in disrupting mate preferences and inducing interspecific hybridization in freshwater fish. Our study indicates that climate change‐driven changes in water quality and chemical pollution may impact visual and chemical communication crucial for mate choice and thus could facilitate hybridization among fishes in freshwater ecosystems. To inform future studies and conservation management, we emphasize the importance of further research to identify the chemical and physical stressors affecting mate choice, understand the mechanisms behind these interactions, determine the concentrations at which they occur, and assess their impact on individuals, populations, species, and biological diversity in the Anthropocene. [ABSTRACT FROM AUTHOR]

Dams are one of the greatest threats to freshwater biodiversity and efforts to remove dams to restore riverine systems are increasing. However, dam‐removal studies have primarily focused on taxonomic responses to large dam removals with little work on the functional trait responses of fish to small‐dam removals; such a focus limits the application of results in regions with different taxonomic compositions.We explored taxonomic and functional trait responses of fish assemblages to two small‐dam removals over 10 years using a Multiple Before After Control Impact design at a dammed and an undammed river. Eight life‐history traits were used to calculate functional diversity (RaoQ) and determine the position of each fish species within a multivariate life‐history space relative to three life‐history strategy endpoints: opportunistic, periodic, and equilibrium. The distance of each species relative to these endpoints was used to calculate community weighted means (CWM), allowing us to examine the shift in life‐history strategy of a given assemblage after dam removal. Based on life‐history theory, we predicted a decrease in the CWM of equilibrium strategists and an increase in the CWM opportunistic strategists after dam removal.For the dammed river, we observed changes in assemblage structure at both the control and impact sites driven primarily by shifts from a lentic to lotic assemblage, with the most apparent change occurring in the formerly impounded sites. These changes tended to occur within 1 year, suggesting rapid colonization by lotic species after habitat change. By contrast, no change in assemblage structure was found for the undammed river, suggesting that dam removal was the primary driver of the shifts in assemblage structure observed in the dammed river. We found no change in the CWM of periodic strategists or RaoQ of all life‐history traits at any site after dam removal.Based on CWM, life‐history strategies shifted in response to dam removal at impounded sites where equilibrium strategists decreased and opportunistic strategists tended to increase after the impounded sites changed from a stable lentic environment to an unstable lotic environment, supporting predictions made by life‐history theory.Our results suggest that small‐dam removal may provide ecological benefits by restoring fish assemblages to a more natural riverine state and reversing the negative effects of dam construction on the ecosystem. We demonstrate that combining both trait‐based and taxonomic approaches can improve our ecological understanding of the impacts of dam removal on fish assemblages and provide relevant data for local management. [ABSTRACT FROM AUTHOR]

Freshwater biodiversity is rapidly declining worldwide, especially in tropical island environments which appear to be particularly vulnerable to alien species. Monitoring biodiversity using effective methods is crucial for conservation efforts. This study aims to examine the capacity of the eDNA-based method to provide accurate measures of fish and crustacean biodiversity, and how it can be implemented in the French West Indies. To this end, we conducted eDNA and electric fishing capture-based surveys in parallel, both upstream and downstream, in nine Guadeloupean rivers and during two different seasons. While both methods were congruent in terms of species richness and composition, the eDNA-based method generally exhibited greater efficacy and reliability in assessing biodiversity. The exception to this trend was observed during the second campaign for the crustacean community. The quantitative data (the numbers of individuals and percentages of sequences) also proved to be uncorrelated for crustaceans during the second campaign, indicating that further knowledge of crustacean biology is needed. Nevertheless, the eDNA-based method was able to detect the presence of alien, rare and cryptic species, showing that it can be used in tropical island conditions for biodiversity assessment or conservation purposes. [ABSTRACT FROM AUTHOR]

The rapid loss of biodiversity in freshwater systems asks for a robust and spatially explicit understanding of species' occurrences. As two complementing approaches, habitat suitability models provide information about species' potential occurrence, while environmental DNA (eDNA) based assessments provide indication of species' actual occurrence. Individually, both approaches are used in ecological studies to characterize biodiversity, yet they are rarely combined. Here, we integrated high‐resolution habitat suitability models with eDNA‐based assessments of aquatic invertebrates in riverine networks to understand their individual and combined capacity to inform on species' occurrence. We used eDNA sampling data from 172 river sites and combined the detection of taxa from three insect orders (Ephemeroptera, Plecoptera, Trichoptera; hereafter EPT) with suitable habitat predictions at a subcatchment level (2 km2). Overall, we find congruence of habitat suitability and eDNA‐based detections. Yet, the models predicted suitable habitats beyond the number of detections by eDNA sampling, congruent with the suitable niche being larger than the realized niche. For local mismatches, where eDNA detected a species but the habitat was not predicted suitable, we calculated the minimal distance to upstream suitable habitat patches, indicating possible sources of eDNA signals from upstream sites subsequently being transported along the water flow. We estimated a median distance of 1.06 km (range 0.2–42 km) of DNA transport based on upstream habitat suitability, and this distance was significantly smaller than expected by null model predictions. This estimated transport distance is in the range of previously reported values and allows extrapolations of transport distances across many taxa and riverine systems. Together, the combination of eDNA and habitat suitability models allows larger scale and spatially integrative inferences about biodiversity, ultimately needed for the management and protection of biodiversity. [ABSTRACT FROM AUTHOR]

Freshwater megafauna, such as sturgeons, giant catfishes, river dolphins, hippopotami, crocodylians, large turtles, and giant salamanders, have experienced severe population declines and range contractions worldwide. Although there is an increasing number of studies investigating the causes of megafauna losses in fresh waters, little attention has been paid to synthesising the impacts of megafauna on the abiotic environment and other organisms in freshwater ecosystems, and hence the consequences of losing these species. This limited understanding may impede the development of policies and actions for their conservation and restoration. In this review, we synthesise how megafauna shape ecological processes in freshwater ecosystems and discuss their potential for enhancing ecosystem restoration. Through activities such as movement, burrowing, and dam and nest building, megafauna have a profound influence on the extent of water bodies, flow dynamics, and the physical structure of shorelines and substrata, increasing habitat heterogeneity. They enhance nutrient cycling within fresh waters, and cross‐ecosystem flows of material, through foraging and reproduction activities. Freshwater megafauna are highly connected to other freshwater organisms via direct consumption of species at different trophic levels, indirect trophic cascades, and through their influence on habitat structure. The literature documenting the ecological impacts of freshwater megafauna is not evenly distributed among species, regions, and types of ecological impacts, with a lack of quantitative evidence for large fish, crocodylians, and turtles in the Global South and their impacts on nutrient flows and food‐web structure. In addition, population decline, range contraction, and the loss of large individuals have reduced the extent and magnitude of megafaunal impacts in freshwater ecosystems, rendering a posteriori evaluation more difficult. We propose that reinstating freshwater megafauna populations holds the potential for restoring key ecological processes such as disturbances, trophic cascades, and species dispersal, which will, in turn, promote overall biodiversity and enhance nature's contributions to people. Challenges for restoration actions include the shifting baseline syndrome, potential human–megafauna competition for habitats and resources, damage to property, and risk to human life. The current lack of historical baselines for natural distributions and population sizes of freshwater megafauna, their life history, trophic interactions with other freshwater species, and interactions with humans necessitates further investigation. Addressing these knowledge gaps will improve our understanding of the ecological roles of freshwater megafauna and support their full potential for facilitating the development of effective conservation and restoration strategies to achieve the coexistence of humans and megafauna. [ABSTRACT FROM AUTHOR]

Climate change is increasing the proportion of river networks experiencing flow intermittence, which in turn reduces local diversity (i.e., α‐diversity) but enhances variation in species composition among sites (i.e., β‐diversity), with potential consequences on ecosystem stability. Indeed, the multiscale theory of stability proposes that regional stability can be attained not only by local processes but also by spatial asynchrony among sites. However, it is still unknown whether and how scale‐dependent changes in biodiversity associated with river flow intermittence influence stability across spatial scales. To elucidate this, we here focus on multiple metacommunities of French rivers experiencing contrasting levels of flow intermittence. We clearly show that the relative contribution of spatial asynchrony to regional stability was higher for metacommunities of intermittent than perennial rivers. Surprisingly, spatial asynchrony was mainly linked to asynchronous population dynamics among sites, but not to β‐diversity. This finding was robust for both truly aquatic macroinvertebrates and for taxa that disperse aerially during their adult stages, implying the need to conserve multiple sites across the landscape to attain regional stability in intermittent rivers. By contrast, metacommunities of truly aquatic macroinvertebrates inhabiting perennial rivers were mainly stabilized by local processes. Our study provides novel evidence that metacommunities of perennial and intermittent rivers are stabilized by contrasting processes operating at different spatial scales. We demonstrate that flow intermittence enhances spatial asynchrony among sites, thus resulting in a regional stabilizing effect on intermittent river networks. Considering that climate change is increasing the proportion of intermittent rivers worldwide, our results suggest that managers need to focus on the spatial dynamics of metacommunities more than on local‐scale processes to monitor, restore, and conserve freshwater biodiversity. [ABSTRACT FROM AUTHOR]

Although somewhat debated, it is generally agreed in Europe that small water bodies comprise lentic ecosystems that are shallow (less than 20 m) and have a surface area of a few hectares (less than 10 ha). In Albania, 84 glacial lakes constitute a substantial portion of the aquatic ecosystems that sustain high levels of biodiversity, metabolic rates, and functionality. This paper discusses the integration of ecological sustainability into ecosystem services (i.e., cultural, regulatory, and sustaining services) and the national ecological networks of protected sites. This integration is particularly important in light of recent advancements regarding European integration. It is also important due to the catchment continuum, which addresses biodiversity values and gradients that, in this work, are considered using rotifer communities and aquatic plant species. The main causes of the stressors on small ecosystems are inappropriate land use, water pollution, altered habitats, non-native species introduction, resource mismanagement in basins, inadequate planning, and a lack of sector integration. The glacial lakes reflect climate change elements through: an increased number of dried glacial lakes, so only 84 remain functioning; the water level is slowly being reduced; the oscillation of the water level is steadily increasing; and the eutrophication process is rapidly advancing. [ABSTRACT FROM AUTHOR]

The article investigates the influences of seasonal variations, physical and chemical factors on zooplankton diversity, density and distribution of sacred grove freshwater in the Banapureeshwar pond at Kumbakonam, Thanjavur district in Tamil Nadu, India. The study assesses water quality parameters including temperature, conductivity, potential of hydrogen (pH), turbidity and salinity. It identified zooplankton species such as copepods, Cladocera, rotifiers and ostracoda in the lentic ecosystem.

The Ganges river dolphin, also known as 'Susu', is a blind aquatic mammal endemic to the Indian subcontinent. Its population has declined significantly over the past 40 years due to threats such as deliberate killing, pollution, and habitat fragmentation. The Indian government has taken steps to conserve the species, including the establishment of the Vikramshila Gangetic Dolphin Wildlife Sanctuary and declaring the GRD as the National Aquatic Animal of India. Collaborative efforts have led to an increase in the dolphin population, but more work is needed. Proposed actions include collaboration among stakeholders, coordination with global experts, cooperation for transboundary commissions, augmentation of protected areas, implementation of e-flow regulations, integration of terrestrial and freshwater ecosystems, engagement of local communities, inclusion of educational activities, conduction of awareness programs, and adoption of advanced digital technologies. These actions aim to improve conservation efforts and elevate the livelihoods of local communities. [Extracted from the article]

Benefits to wildlife communities stemming from the protection of a single species have been documented in terrestrial and marine systems but remain understudied within the context of freshwater‐protected areas (FPAs). We used five long‐standing (>80 years) FPAs in three lakes in eastern Ontario, Canada, which were initially established to protect native black bass (Micropterus spp.) from angling exploitation, to assess whether this protection affected wildlife communities found in the riparian areas of these FPAs. From May to July 2021, we used baited remote camera traps and visual surveys to assess species diversity within and outside of FPAs. We recorded 61 species spanning mammalian, avian and herpetofauna taxa, with the two assessment methods identifying unique sets of species (23% overlap). Camera traps showed that animals were more active in riparian areas during the day (62% of detections) than at night. FPAs had a variable but overall positive influence on riparian wildlife biodiversity, hosting more bird, mammal, amphibian and reptile species than non‐protected areas and having higher species richness. FPAs differed from other sites in the lakes by having higher habitat complexity, less human infrastructure and less human use, which potentially contributed to these differences. This study raises awareness that even small FPAs can have legacy, umbrella‐type benefits that extend beyond fishes to the wildlife that use the adjacent riparian areas. [ABSTRACT FROM AUTHOR]

The current progressive increase in urbanisation is a contributing factor to the alarming rate of decrease in biodiversity worldwide, so it is critical to propose new solutions that bring nature, and their associated benefits, back to cities. Urban ponds and pondscapes are potential Nature-based Solutions that play a crucial role in the conservation and promotion of biodiversity, as well as providing other ecosystem services. Therefore, it is important to understand people's perception of the contribution that these ponds/pondscapes make in their daily lives. The aim of this study was to assess public perception of the value of the multiple ecosystem services, here referred to as Nature's Contributions to People (NCPs), provided by urban ponds with a focus on biodiversity. To achieve it, we conducted a face-to-face questionnaire survey among 331 visitors of urban parks and nature reserves in a medium-sized European city (Geneva, Switzerland). The results show that people highly value the different contributions provided by urban ponds, and that contact with nature is the main motivation for visiting urban pondscapes. Their positive view about the provided NCPs and also their acknowledgement of an improved quality of life suggest a public acceptance of these ponds. We also found that gender and income do not influence public perception of the contributions provided by urban pondscapes. Additionally, the biodiversity of urban ponds was highly appreciated, but there was a knowledge gap relating to biodiversity conservation, as both native and exotic species were valued equally. In conclusion, ponds are Nature-based Solutions that are very well adapted and accepted in cities, and in the future they should be part of the greening (and blueing) of urban planning to conserve and enhance freshwater biodiversity whilst also providing NCPs. [ABSTRACT FROM AUTHOR]

Mediterranean high-mountain lakes are being increasingly affected by strong Saharan dust deposition events. However, the ecological impacts of these severe atmospheric episodes remain largely unknown. We examined the effects of a strong Saharan dust intrusion to the Iberian Peninsula in 2022 on the physicochemical parameters and prokaryotic communities in sediments of nine high-mountain lakes of Sierra Nevada (Spain) located above 2800 m.a.s.l and in different orientations (north vs. south). A previous year (2021), with lower Saharan dust deposition with respect to 2022, was used for interannual comparisons. The strong dust deposition to the high-mountain lakes resulted in a significant increase in sediment nutrient availability which was linked to changes in the composition of prokaryotic communities. Decreases in alpha diversity and changes in beta diversity of prokaryotic communities were mainly observed in lakes located in the south compared to the north orientation likely because the former was more affected by the atmospheric dust deposition episode. Dust intrusion to the high-mountain lakes resulted in significant changes in the relative abundance of specific genera involved in important nutrient cycling processes such as phosphate solubilization, nitrogen fixation, nitrification, and denitrification. Saharan dust deposition also increased predicted microbial functionality in all lakes. Our findings show that severe atmospheric dust inputs to remote high-mountain lakes of Sierra Nevada can have significant biogeochemical and biodiversity consequences through changes in nutrient availability and prokaryotic communities in sediments of these freshwater ecosystems. This information contributes to understanding how Mediterranean high-mountain lakes of Sierra Nevada face strong intrusions of Saharan dust and their ecological consequences. [ABSTRACT FROM AUTHOR]