45 results on '"Farias, Inês"'
Search Results
2. Designing a coastal monitoring marine biodiversity survey, using trammel nets and gillnets in Portugal
- Author
-
Rufino, Marta M., Maia, Catarina, Dinis, David, Farias, Inês, Moura, Teresa, Gomes, Pedro, Quaresma, Ivania, Martins, Rogélia, Figueiredo, Ivone, Serra-Pereira, Bárbara, Gaspar, Miguel B., and Moreno, Ana
- Published
- 2025
- Full Text
- View/download PDF
3. Identification and characterization of a polyomavirus in the thornback skate (Raja clavata)
- Author
-
Abrantes, Joana, Varsani, Arvind, Pereira, Paulo, Maia, Catarina, Farias, Inês, Veríssimo, Ana, and Neves, Fabiana
- Published
- 2023
- Full Text
- View/download PDF
4. Genomics goes deeper in fisheries science: The case of the blackspot seabream (Pagellus bogaraveo) in the northeast Atlantic
- Author
-
Cunha, Regina L., Robalo, Joana I., Francisco, Sara M., Farias, Inês, Castilho, Rita, and Figueiredo, Ivone
- Published
- 2024
- Full Text
- View/download PDF
5. Ontogenetic spatial dynamics of the deep-sea teleost Aphanopus carbo in the NE Atlantic according to otolith geochemistry
- Author
-
Farias, Inês, Pérez-Mayol, Sílvia, Vieira, Sofia, Oliveira, Paulo B., Figueiredo, Ivone, and Morales-Nin, Beatriz
- Published
- 2022
- Full Text
- View/download PDF
6. Sex steroids of black scabbardfish, Aphanopus carbo, in relation to reproductive and migratory dynamics
- Author
-
Farias, Inês, Couto, Elsa, Lagarto, Neide, Delgado, João, Canário, Adelino V.M., and Figueiredo, Ivone
- Published
- 2021
- Full Text
- View/download PDF
7. Struggling with Fish Age: A Comparative Analysis of Otolith Preparation Techniques to Unravel Age and Growth of Boarfish, Capros Aper (Linnaeus, 1758)
- Author
-
Silva, Maria Inês, primary, Martins, Rui, additional, Sequeira, Vera, additional, Silva, Dina, additional, Farias, Inês, additional, Assis, Carlos A., additional, Gordo, Leonel Serrano, additional, and Vieira, Ana Rita, additional
- Published
- 2024
- Full Text
- View/download PDF
8. Benchmarking for data-limited fishery systems to support collaborative focus on solutions
- Author
-
Stratoudakis, Yorgos, Azevedo, Manuela, Farias, Inês, Macedo, Carlos, Moura, Teresa, Pólvora, Manuel J., Rosa, Cristina, and Figueiredo, Ivone
- Published
- 2015
- Full Text
- View/download PDF
9. Reproductive and feeding spatial dynamics of the black scabbardfish, Aphanopus carbo Lowe, 1839, in NE Atlantic inferred from fatty acid and stable isotope analyses
- Author
-
Farias, Inês, Figueiredo, Ivone, Janeiro, Ana Isabel, Bandarra, Narcisa Maria, Batista, Irineu, and Morales-Nin, Beatriz
- Published
- 2014
- Full Text
- View/download PDF
10. Oceanic cephalopods around Atlantic seamounts and islands
- Author
-
Moreno, Ana (IPMA), Roura, Álvaro, González, Ángel F., Gomes, Pedro, Farias, Inês, Moreno, Ana (IPMA), Roura, Álvaro, González, Ángel F., Gomes, Pedro, and Farias, Inês
- Abstract
Several old and recent collections of oceanic cephalopods collected during research surveys in Atlantic waters, were put together to improve our knowledge on the distribution of cephalopod species and the pelagic realm biodiversity in the Atlantic Ocean. Sampling area covers the Irving, Tyro and Atlantis seamounts south of the Azores Archipelago and the Gorringe Bank, Seine, Ampere and Josephine seamounts in the Madeira-Tore region, the oceanic waters between the Portuguese southern continental shelf and these seamounts and waters surrounding Cape Verde Islands. Samples from 1994 were taken with the German RV Poseidon under the research project Eurosquid II. Samples from 2015 and 2016 were taken by the Portuguese RV Noruega under the research project Biometore. Additional samples were taken with German research vessels in oceanic waters surrounding the Azores and the Cape Verde Archipelagos. Cephalopods of these collections were collected with a Pelagic Trawl and Isaacs-Kidd Midwater Trawl (IKMT) to sample mesopelagic and epipelagic adults and juveniles, and Bongo nets to sample paralarvae in the upper 200 m. The early life stages of many cephalopod species are virtually unknown, which makes the taxonomic identification of cephalopods captured by plankton nets very difficult. Furthermore, the identification of early stages of many well-known species is problematic due to strong morphologic similarities between related taxa within each family. Therefore, molecular techniques were used to identify some paralarval specimens in the alcohol preserved samples. Cephalopod distribution is analysed in relation to topographic features in the open ocean, such as seamounts and islands
- Published
- 2022
11. Workshop on ICES reference points (WKREF2)
- Author
-
Lordan, Colm, Orio, Alessandro, Kempf, Alexander, Pierucci, Andrea, Kuparinen, Anna, Rindorf, Anna, Peyronnet, Arnaud, Wilson, Ashley, Albertsen, Christoffer Moesgaard, Konrad, Christoph, Sparrevohn, Claus Reedtz, Minto, Cóilín, Howell, Daniel, Gilljam, David, Miller, David, Garcia, Dorleta, Armelloni, Enrico, Abad, Esther, Masnadi, Francesco, Scarcella, Giuseppe, Dingsør, Gjert Endre, Winker, Henning, Sparholt, Henrik, Farias, Inês, Horbowy, Jan, Lecomte, Jean-Baptiste, Hutchings, Jeffrey A., Fall, Johanna, Lövgren, Johan, Simmonds, John, Shrives, Jonathan, De Oliveira, José, Hommik, Kristiina, Kell, Laurence, Vansteenbrugge, Lies, Borges, Lisa, Batts, Luke, Taylor, Marc, Pastoors, Martin, Scanu, Martina, Cardinale, Massimiliano, Gras, Michaël, Deurs, Mikael van, Goñi, Nicolas, Graham, Norman, Silvar Viladomiu, Paula, Sampedro, Paz, Hilborn, Ray, Sharma, Rishi, Millar, Sarah, Nimmegeers, Sofie, Miethe, Tanja, Perälä, Tommi, Bartolino, Valerio, Lordan, Colm, Orio, Alessandro, Kempf, Alexander, Pierucci, Andrea, Kuparinen, Anna, Rindorf, Anna, Peyronnet, Arnaud, Wilson, Ashley, Albertsen, Christoffer Moesgaard, Konrad, Christoph, Sparrevohn, Claus Reedtz, Minto, Cóilín, Howell, Daniel, Gilljam, David, Miller, David, Garcia, Dorleta, Armelloni, Enrico, Abad, Esther, Masnadi, Francesco, Scarcella, Giuseppe, Dingsør, Gjert Endre, Winker, Henning, Sparholt, Henrik, Farias, Inês, Horbowy, Jan, Lecomte, Jean-Baptiste, Hutchings, Jeffrey A., Fall, Johanna, Lövgren, Johan, Simmonds, John, Shrives, Jonathan, De Oliveira, José, Hommik, Kristiina, Kell, Laurence, Vansteenbrugge, Lies, Borges, Lisa, Batts, Luke, Taylor, Marc, Pastoors, Martin, Scanu, Martina, Cardinale, Massimiliano, Gras, Michaël, Deurs, Mikael van, Goñi, Nicolas, Graham, Norman, Silvar Viladomiu, Paula, Sampedro, Paz, Hilborn, Ray, Sharma, Rishi, Millar, Sarah, Nimmegeers, Sofie, Miethe, Tanja, Perälä, Tommi, and Bartolino, Valerio
- Abstract
The ICES Workshop on ICES reference points (WKREF2) was tasked review the WKREF1 report and based on the outcome develop updated guidelines for the ICES reference points system and recommendations for ACOM consideration. The WKREF1 report has suggested 5 key recommendations to simplify and harmonise the ICES reference points framework representing a major change to the current guidelines. At WKREF2, we detailed discussions and four key concerns were raised about the proposed approach. The first related to the simplification of rules to define Blim. Around two thirds of category 1 stocks would end up as WKREF1 “Blim Type 2” where Blim would be set as a fraction of B0. The Allee effect or “depensation” maybe more important than previously thought and should be furthered explored for ICES stocks since it has important consequences for Blim. A number of challenges and issues around defining Blim using the current guidelines were documented. Some suggestions on improvement criteria were discussed including using classifiers to define spasmodic stocks and using change point algorithms to address non-stationary productivity regimes. However, further work is need to make these approaches operational and there was no consensus that the WKREF1 Blim types should replace the current guidelines. WKREF1 recommended that the FMSY proxy should be based on a biological proxies and should be less than the deterministic FMSY. It was pointed out that the stochastic FMSY estimated in EqSim for example, is lower than the deterministic FMSY and that the current guidelines ensure that the FMSY should not pose a more than 5% risk to Blim. A large amount of work described in WD 1 was carried out to develop an MSE framework to consistency and robustness test a candidate reference point system for North East Atlantic stocks. However, WKREF2 recommended tha
- Published
- 2022
12. Ontogenetic spatial dynamics of the deep-sea teleost Aphanopus carbo in the NE Atlantic according to otolith geochemistry
- Author
-
Fundação para a Ciência e a Tecnologia (Portugal), European Maritime and Fisheries Fund, European Commission, Governo da República Portuguesa, Farias, Inês, Pérez-Mayol, Silvia, Vieira, Sofia, Oliveira, Paulo B., Figueiredo, Ivone, Morales-Nin, Beatriz, Fundação para a Ciência e a Tecnologia (Portugal), European Maritime and Fisheries Fund, European Commission, Governo da República Portuguesa, Farias, Inês, Pérez-Mayol, Silvia, Vieira, Sofia, Oliveira, Paulo B., Figueiredo, Ivone, and Morales-Nin, Beatriz
- Abstract
The spatial distribution of deep-sea fishes is commonly related to major water masses or regional circulatory features that in turn may reflect differences in food-web structure and productivity. Aphanopus carbo is a benthopelagic species that undergoes horizontal and vertical migrations driven by spawning and by feeding, and for which a large-scale clockwise migration around the NE Atlantic is hypothesized. In this work, the adequacy of otolith microchemical composition used as tool to discriminate A. carbo specimens caught at different areas was investigated. Furthermore, potential birth areas and spatial pattern migration throughout the species life cycle were studied. Trace element concentration (TEC) in the otolith edge allowed the discrimination of the locations where specimens were caught and supported the separation between the northern and the southern distribution areas. The existence of two natal sources was suggested based on the separation of otolith core TEC into two groups. Longitudinal multivariate analyses applied to TEC data also sustained the separation of the otoliths into two main groups, but the mixing between them gives support to the species migratory hypothesis. The acceptance of both southern and northern spawning grounds and of migratory movements along the NE Atlantic in both northward and southward directions implies changes to the current migratory hypothesis that might be translated into new definitions of A. carbo stock structure and therefore fisheries management.
- Published
- 2022
13. Workshop on ICES reference points (WKREF2)
- Author
-
Orio, Alessandro, Kemp, Alexander, Pierucci, Andrea, Kuparinen, Anna, Rindorf, Anna, Peyronnet, Arnaud, Wilson, Ashley, Albertsen, Christoffer Moesgaard, Konrad, Christoph, Sparrevohn, laus Reedtz, Minto, Cóilín, Howell, Daniel, Gilljam, David, Miller, David, Garcia, Dorleta, Armelloni, Enrico, Abad, Esther, Masnadi, Francesco, Scarcella, Giuseppe, Dingsør, Gjert Endre, Winker, Henning, Sparholt, Henrik, Farias, Inês, Horbowy, Jan, Lecomte, Jean-Baptiste, Hutchings, Jeffrey A., Fall, Johanna, Lövgren, Johan, Simmonds, John, Shrives, Jonathan, Oliveira, José De, Hommik, Kristiina, Kel, Laurence, Vansteenbrugge, Lies, Borges, Lisa, Batts, Luke, Taylor, Marc, Pastoors, Martin, Scanu, Martina, Cardinale, Massimiliano, Gras, Michaël, Deurs, Mikael van, Goñi, Nicolas, Graham, Norman, Viladomiu, Paula Silvar, Sampedro, Paz, Hilborn, Ray, Sharma, Rishi, Millar, Sarah, Nimmegeers, Sofie, Miethe, Tanja, Perälä, Tommi, Bartolino, Valerio, Lordan, Colm, and ICES
- Subjects
Fisheries and aquaculture ,Fishery management reference points ,ICES ,Management advice ,Reference points ,Fisheries ,ICES resources ,All ICES Ecoregions - Abstract
The ICES Workshop on ICES reference points (WKREF2) was tasked review the WKREF1 report and based on the outcome develop updated guidelines for the ICES reference points system and recommendations for ACOM consideration. The WKREF1 report has suggested 5 key recom- mendations to simplify and harmonise the ICES reference points framework representing a ma- jor change to the current guidelines. At WKREF2, we detailed discussions and four key concerns were raised about the proposed approach. The first related to the simplification of rules to define Blim. Around two thirds of category 1 stocks would end up as WKREF1 “Blim Type 2” where Blim would be set as a fraction of B0. The Allee effect or “depensation” maybe more important than previously thought and should be furthered explored for ICES stocks since it has important consequences for Blim. A number of challenges and issues around defining Blim using the current guidelines were documented. Some suggestions on improvement criteria were discussed including using classifiers to define spas- modic stocks and using change point algorithms to address non-stationary productivity regimes. However, further work is need to make these approaches operational and there was no consen- sus that the WKREF1 Blim types should replace the current guidelines. WKREF1 recommended that the FMSY proxy should be based on a biological proxies and should be less than the deterministic FMSY. It was pointed out that the stochastic FMSY estimated in EqSim for example, is lower than the deterministic FMSY and that the current guidelines ensure that the FMSY should not pose a more than 5% risk to Blim. A large amount of work described in WD 1 was carried out to develop an MSE framework to consistency and robustness test a candidate refer- ence point system for North East Atlantic stocks. However, WKREF2 recommended that further work needs to be carried out to condition and test the simulation framework before the conclu- sions could be adopted by ICES and incorporated into the guidelines. A number of considerations for defining MSY related reference points were discussed including using model validation and prediction skill to ensure that ICES provide robust and credible ad- vice. There is evidence that density dependence (DD) is important in the majority of ICES stocks (68% in recruitment and 54% in growth). The correct prediction of the shape and strength of density-dependence in productivity is key to predicting future stock development and providing the best possible long-term fisheries management advice. A suggested approach to use surplus production models (SPMs) to account for DD in FMSY was suggested and discussed but there was no consensus on whether that approach was appropriate. There was consensus that the FECO approach as a means of adapting target fishing mortality to medium-term changes in productiv- ity should be included in the guidelines subject to a benchmark and ACOM approval. While WKREF1 and 2 focused mainly on Category 1 stocks ToR c) called for a “simplified and harmonised set of guidelines for estimating MSY and precautionary reference points applicable in the advice framework across various ICES stock categories.” Ideally the ICES assessment cat- egories should provide equivalent risk across all stocks. This issue was discussed but no recom- mendations emerged. There was no consensus a revised reference point framework was proposed at WKREF2. How- ever, it was agreed that it should be presented here for further discussion at ACOM and other fora. The key feature of the suggested approach is that the stock status evaluation is treated in- dependent of the Advice Rule (AR). The main feature of the system is that the biomass trigger is not linked to a stock status evaluation, it is linked to the expected biomass when fishing at the target fishing mortality, in contrast to the current ICES approach. It also entailed that FMSY would also become an upper limit of fishing mortality and that the advised fishing mortality would be set at or lower than that level. WKREF2 did not discuss what to do in situations where SSB< Blim or alternative forms of HCR for the advice rule. Building community understanding and con- sensus around simplified and harmonised guidelines has yet to be achieved. A further workshop WKREF3 will be required to achieve that aim. The report includes 6 recommendations for ACOM consideration. ICES The main objective of the workshop was to review the recommendations of WKREF1 and con- sider how these might feed into a new reference points framework and guidelines for ICES. There were a number of presentations on the wider issues of best practice for reference points, the Allee effect, density dependence and the WKIRISH approach. The starting point was to try and develop a set of simplified and harmonised guidelines based on the WKREF1 report rather than evolving the current guidelines to include the WKREF1 conclusions. A key aspect of the meeting was to allow for discussions in order to build a shared understanding of the strengths and weakness of the current framework and of the new framework emerging from WKREF1. Published Non Refereed
- Published
- 2022
- Full Text
- View/download PDF
14. Growth and maturity of the lesser‐spotted dogfish Scyliorhinus canicula (Linnaeus, 1758) in the southern Portuguese continental coast
- Author
-
Moreira, Inês, primary, Figueiredo, Ivone, additional, Farias, Inês, additional, Lagarto, Neide, additional, Maia, Catarina, additional, Robalo, Joana, additional, and Moura, Teresa, additional
- Published
- 2021
- Full Text
- View/download PDF
15. Dynamics of the deep-sea teleost black scabbardfish (Aphanopus carbo Lowe, 1839) in the Northeast Atlantic
- Author
-
Alves Farias, Inês and Morales Nin, Beatriz
- Subjects
otòlit ,Ictiologia i Biologia Pesquera ,elements traça ,peix sable negra ,stable isotopes ,trace elements ,àcids grassos ,isotopos estables ,migration ,fatty acids ,otolith ,esteroides sexuales ,bentopelàgic ,elementos traza ,NE Atlàntic ,population dynamics ,sex steroids ,black scabbardfish ,NE Atlantic ,ácidos grasos ,otolito ,Aphanopus carbo ,migració ,dinámica poblacional ,isòtops estables ,Atlántico NE ,migración ,esteroids sexuals ,sable negro ,benthopelagic ,dinàmica de la població ,bentopelágico - Abstract
[eng] Aphanopus carbo (Lowe, 1839), the black scabbardfish, is a benthopelagic teleost with high commercial value in the NE Atlantic, especially in Madeira Archipelago and mainland Portugal. Given its commercial interest and high susceptibility to overfishing, as a consequence of low fecundity and low growth rate, improving the knowledge on its life cycle and population dynamics is of uttermost importance for improving fisheries management and advice. Although some questions persist, the agreed assumption is that there is a unique stock that undergoes a clockwise migration around the NE Atlantic driven by feeding and reproduction. The available information that supports the hypothetical migratory cycle of A. carbo was reviewed in this Thesis and different methodological approaches were proposed to explore its life history traits and relate them with the migratory cycle, in order to increase information on the species for a sustainable knowledge-based fishery management, and to assess its population dynamics and spatial pattern in the NE Atlantic. Differences in fatty acids and stable isotopes concentrations in the muscle tissue of specimens from different areas supported the species hypothetical migratory cycle. Mature specimens showed a prevalence of polyunsaturated fatty acids (PUFA) which are related with high energetic demands, supporting the hypothesis that the black scabbardfish continues to feed during the spawning period. PUFA associated with a response to stress were high in specimens from the southernmost areas which might be related with the expected long-distance migrations. The analysis of sex steroids in blood serum confirmed their role as intrinsic triggers for gonadal maturation and spawning in black scabbardfish. Based on estradiol (E2) and testosterone (T) concentrations, some developing females from Madeira were clustered with females from mainland Portugal, giving evidence that not all developing females will have the ability to mature and reproduce during the current spawning season. The previous methodologies allowed relating biochemical traits with the species life cycle and compare them between geographical areas in a short and recent time-frame. To understand the species taxonomic and species spatial diversity throughout its life cycle, otoliths were used as chemical markers. In a first study, otolith trace element composition (TEC) was shown to be adequate to separate the two Aphanopus species that are mixed in landings from the Madeiran longline fleet. It was further demonstrated that quantifying Mg, Cr, Sr, and Ba in the otolith increment that corresponds to age-class 9 can be an effective way to identify the species using LA- ICPMS at relatively reduced costs. This technique could be applied to archived collections of otoliths to perceive the historical presence of A. intermedius in landings in Madeira, reconstruct species abundance time-series and infer if the species is moving northwards. Otolith microchemical analysis was also applied to infer the migratory movements of A. carbo along the NE Atlantic by quantifying certain trace elements at selected otolith zones that represent different life history stages, namely the core, age three, age five, and the edge. TEC in the otolith edge could discriminate the locations where specimens were caught, separating the northernmost from the southernmost areas. The longitudinal multivariate analyses of TEC also sustained the separation of the otoliths into two groups, but there is high mixing between them, which agrees with the migratory hypothesis. The existence of two natal sources was suggested from otolith core TEC analysis. The acceptance of both southern and northern spawning grounds and of migratory movements along the NE Atlantic in both northward and southward directions implies changes to the current migratory hypothesis that might translate into changes in A. carbo’s stock assessment. [cat] Aphanopus carbo (Lowe, 1839), el peix sable negra, és un teleòste bentopelàgic amb un alt valor comercial a l'NE Atlàntic, especialment a l'arxipèlag de Madeira i a Portugal continental. Atès el seu interès comercial i la seva alta susceptibilitat a la sobrepesca, com a conseqüència de la baixa fecunditat i la baixa taxa de creixement, millorar la informació sobre el seu cicle de vida i la dinàmica de la població és de màxima importància per millorar la gestió i l'assessorament de la pesca. Tot i que hi ha preguntes sobre el seu cicle de vida i la dinàmica de la població que romanen sense resposta, la suposició acordada és que hi ha un estoc únic que experimenta una migració en sentit horari al voltant de l'NE Atlàntic impulsada per l'alimentació i la reproducció. La informació disponible que dóna suport al hipotètic cicle migratori de A. carbo es va revisar en aquesta tesi i es van proposar diferents enfocaments metodològics per explorar els trets de la seva història de vida i relacionar-los amb el cicle migratori, per tal d’incrementar la informació sobre la espècie per a una gestió sostenible de la pesca basada en el coneixement de les espècies i la seva dinàmica de població i patró espacial al Nord-Atlàntic. Les diferències en àcids grassos i les concentracions estables d’isòtops en el teixit muscular d’exemplars de diferents àrees van donar suport a l’hipotètic cicle migratori de l’espècie. Els exemplars madurs van mostrar una prevalença d’àcids grassos poliinsaturats (PUFA) que es relacionen amb elevades demandes energètiques, donant suport a la hipòtesi que el sable negre continua alimentant-se durant el període de posta. Els PUFA associats amb una resposta a l’estrès van ser elevats en exemplars de les zones més meridionals, cosa que podria estar relacionada amb les migracions esperades de llarga distància. L’anàlisi d’esteroides sexuals al sèrum sanguini va confirmar el seu paper com a desencadenants intrínsecs per a la maduració gonadal i la posta en sable negre. Basant-se en les concentracions d’estradiol (E2) i testosterona (T), algunes femelles en desenvolupament de Madeira es van agrupar amb femelles del Portugal continental, donant evidència que no totes les femelles en desenvolupament tindran la capacitat de madurar i reproduir-se durant la temporada actual de posta. Les metodologies anteriors permeten relacionar trets bioquímics amb el cicle de vida de les espècies i comparar-los entre àrees geogràfiques en un període de temps curt i recent. Per entendre diversitat taxonòmica i espacial de l’espècie al llarg del seu cicle de vida, es van utilitzar otòlits com a marcadors químics. En un primer estudi, es va demostrar que la composició d’elements traça d’otòlits (TEC) era adequada per separar les dues espècies d’Aphanopus que es barregen en els desembarcaments de la flota de palangre de Madeira. Es va demostrar, a més, que quantificar Mg, Cr, Sr i Ba en l'increment de l'otòlit que correspon a la classe d'edat 9 pot ser una manera eficaç d'identificar les espècies mitjançant LA-ICPMS a costos relativament reduïts. Aquesta tècnica es podria aplicar a col·leccions d’otòlits arxivades per percebre la presència històrica d’A. intermedius als desembarcaments a Madeira, reconstruir sèries temporals d’abundància d’espècies i inferir si l’espècie es mou cap al nord. L'anàlisi microquímica d'otolits també es va aplicar per inferir els moviments migratoris d'A. carbo al llarg de l'Atlàntic NE quantificant certs oligoelements en zones seleccionades d'otòlits que representen diferents etapes de la història de la vida, és a dir, el nucli, tres anys, cinc anys i la vora. El TEC a la vora de l’otòlit podria discriminar els llocs on es van capturar els exemplars, separant la zona més septentrional de la zona més meridional. Les anàlisis longitudinals multivariants de TEC també van mantenir la separació dels otòlits en dos grups, però hi ha una gran barreja entre ells, cosa que concorda amb la hipòtesi migratòria. L'existència de dues fonts natals es va suggerir a partir de l'anàlisi TEC del nucli d'otòlits. L’acceptació de les zones de posta tant del sud com del nord i dels moviments migratoris al llarg de l’NE Atlàntic en direccions nord i sud implica canvis en la hipòtesi migratòria actual que es podria traduir en canvis en l’avaluació d’estoc d’A. carbo. [spa] Aphanopus carbo (Lowe, 1839), el sable negro, es una especie bentopelágica con elevado valor comercial en el Atlántico NE, especialmente en Madeira y en Portugal peninsular. Dado su interés comercial y su elevada susceptibilidad a sobrepesca, como consecuencia de baja fecundidad y baja tasa de crecimiento, mejorar el conocimiento sobre su ciclo de vida y dinámica poblacional tiene máxima importancia para la gestión y asesoramiento de las pesquerías. Aunque quedan algunas cuestiones, la suposición acuerdada es que hay un stock único que hace una migración al redor del Atlántico NE en el sentido de las agujas del reloj estimulado por la reproducción y alimentación. La información disponible que sustenta la hipótesis del ciclo migratorio del A. carbo fue revisada en esta Tesis y se proponen diferentes abordajes metodológicos para explorar sus características vitales y relacionarlos con el ciclo migratorio, con el objetivo de aumentar la información sobre la especie en el sentido de un asesoramiento de la pesquería basado en el conocimiento, y para investigar su dinámica poblacional y patrón espacial en el Atlántico NE. Diferencias en la concentración de ácidos grasos y de isotopos estables en el tejido muscular de especímenes de diferentes áreas soportan el hipotético ciclo migratorio de la especie. En individuos maduros prevalecieron los ácidos grasos polinsaturados (PUFA) que están relacionados con elevada demanda energética, apoyando la hipótesis de que el sable negro sigue alimentándose durante la época de madurez sexual. Los PUFA, que están relacionados con la respuesta al estrés, alcanzaron niveles más altos en los especímenes de las áreas más a sur, pudendo estar relacionado con las migraciones de larga escala. Los análisis de esteroides sexuales en el suero sanguíneo confirmaron su papel como desencadenantes intrínsecos de la maduración de las gónadas y del desove del sable negro. Con base en la concentración de estradiol (E2) y de testosterona (T), algunas hembras en maduración capturadas en Madeira se agruparon con las hembras de Portugal peninsular, dando pruebas de que no todas las hembras en maduración tendrán la capacidad de madurar y reproducirse durante la presente época de desove. Las metodologías anteriores permiten relacionar trazos bioquímicos con el ciclo de vida de la especie y compararlos entre áreas geográficas. Para comprender la diversidad taxonómica y espacial de la especie a lo largo del ciclo de vida, los otolitos fueran usados como registradores químicos del ambiente donde el individuo vivió. En un primero estudio, se demostró que la concentración de elementos traza (TEC) de los otolitos es adecuada para separar las dos especies de Aphanopus que están mezcladas en los desembarques de la flota de palangre de Madeira. Además, se demostró que es posible separar las dos especies usando el LAICPMS con base en la cuantificación de los elementos Mg, Cr, Sr y Ba en el incremento del otolito que corresponde a la clase de edad 9. Esta técnica podrá ser empleada en colecciones archivadas de otolitos para demostrar la presencia histórica de A. intermedius en los desembarques en Madeira, reconstruir series temporales de abundancia de las especies y inferir si la especie se está desplazando hacia el norte. El análisis de microquímica de otolitos también fue empleada para inferir los movimientos migratorios de A. carbo alrededor del Atlántico NE por cuantificación de determinados elementos traza en zonas seleccionadas del otolito que representan diferentes fases de su historia de vida, a saber, el núcleo, los incrementos correspondientes a la edad tres y la edad cinco y el borde del otolito. Fue posible discriminar las áreas donde los especímenes fueron capturados con base en las TEC, separando las áreas más al norte de las más al sur. El análisis longitudinal multivariado de las TEC también suportó la separación de los otolitos en dos grupos, pero con elevada mezcla entre ellos, lo que corrobora la hipótesis de migración. La existencia de dos zonas de reproducción fue sugerida con base en el análisis de TEC en el núcleo de los otolitos. La aceptación de dos áreas de desove, en el sur y en el norte y de movimientos migratorios en el sentido norte y sur del Atlántico NE implica cambios en la actual hipótesis migratoria que podrán traducirse en cambios en el asesoramiento del stock de A. carbo.
- Published
- 2021
16. Report of the Working Group on Biological Parameters (WGBIOP) 2020
- Author
-
Aanestad, J., Allegaert, Wim, Beier, U., Bekaert, K. (Karen), Canha, A.M.L. (Ángela M.L.), Carbonara, P. (Pierluigi), Davies, J.L. (Julie Coad), Farias, Inês, Follesa, M.C. (Maria Cristina), Gault, Mandy, Gillespie-Mules, R. (Ruadhán), Haase, S. (Stephanie), Hilvarsson, A. (Annelie), Hüssy, K. (Karin), Korta, M. (María), Krüger-Johnsen, M. (María), Krumme, U. (Uwe), Landa, J. (Jorge), Mahé, K. (Kélig), Maxwell, David, McCormick, H. (Helen), Mirny, Zuzanna, Nunes, C. (Cristina), Ofridopoulou, Konstantina, Pérez-Rodríguez, A. (Alfonso), Piñeiro-Álvarez, C.G. (Carmen Gloria), Raid, Tiit, Raitaniemi, J. (Jari), Sapounidis, Argyris, Sauger, Carine, Smith, J., Stransky, C. (Christoph), Tomkiewicz, J., Torreele, E. (Els), Torres-Cutillas, P. (Pedro), Ulleweit, J. (Jens), van Damme, C.J.G. (Cindy), Visconti, V., Vxtale, F. (Francesca), Carbonara, P. (Pierluigi), Coad Davies, J., and van Damme, C.J.G. (Cindy)
- Subjects
biological parameters ,fish ,graphs ,training ,Centro Oceanográfico de Santander ,nutrient cycles ,gloria ,Pesquerías ,quality assurance ,natural resources ,symbionts ,data processing - Abstract
The main objective of the Working Group on Biological Parameters (WGBIOP) is to review the status, issues, developments, and quality assurance of biological parameters for use in assess-ments and management that are in line with the requirements of end-users. In this final year of the three-year term, WGBIOP operated under challenging circumstances due to COVID-19 measures. The initial action plan was replaced by a more flexible one, where online plenary and subgroup meetings were spread over the year with intersessional work to finalize the proposed deliverables. WGBIOP continued the review of past exchanges and workshops under the remit of the working group. Since 2019, these calibrations on age, maturity, and larvae identification have been carried out in SmartDots, an online platform for sharing images and facilitating the reading of otoliths, staging of gonads, and identification of early life stages. Developments are underway to include an improved calculation of modal age and error matrices in the SmartDots standard report. WGBIOP investigated ways to incorporate error matrices into assessments and studied the effect of this inclusion together with stock assessors. Requests for new exchanges and workshops were reviewed, with a focus on stocks to be bench-marked in the coming years. Issue lists were scrutinized, problems identified, and information provided to stock coordinators via regular channels and through the Stock Identification Data-base (SID). Despite close cooperation with stock assessors and continued efforts, it has not been possible to further streamline the WGBIOP workflow with the benchmark process. This will be addressed with the Advisory Committee. The need for validation studies was stressed by the repeated low levels of agreement between readers of some stocks and recurring issues and recommendations to WGBIOP. Lack of resources is the main obstacle. As a first step for measures to prioritize validation studies, WGBIOP iden-tified precision, trueness, and feasibility of validation methods (as well as the urgency for the assessment). WGBIOP continued investigations into new life-history parameters for integrated assessment and advice in cooperation with end-users (Working Group on Integrative, Physical-biological and Ecosystem Modelling-WGIPEM and Regional Coordination Groups-RCGs). This included a standardization and quality assurance action plan for stomach sampling. Efforts have also been taken to streamline data and workflows across databases and groups. A step has been taken in the standardization of quality assurance procedures at the regional level. Institute-level overviews of methods and quality assurance protocols used for ageing and maturity are now available. Also, a new method for quality grading was developed, tested, and implemented in SmartDots.
- Published
- 2020
17. Sex steroids of black scabbardfish, Aphanopus carbo, in relation to reproductive and migratory dynamics
- Author
-
Fundação para a Ciência e a Tecnologia (Portugal), Ministério da Agricultura, do Desenvolvimento Rural e das Pescas (Portugal), European Commission, Farias, Inês, Couto, Elsa, Lagarto, Neide, Delgado, João, Canario, Adelino V. M., Figueiredo, Ivone, Fundação para a Ciência e a Tecnologia (Portugal), Ministério da Agricultura, do Desenvolvimento Rural e das Pescas (Portugal), European Commission, Farias, Inês, Couto, Elsa, Lagarto, Neide, Delgado, João, Canario, Adelino V. M., and Figueiredo, Ivone
- Abstract
Black scabbardfish, Aphanopus carbo, is a commercially important species that takes distant migrations throughout its life cycle. Sex steroids were measured by radioimmunoassay in the blood plasma of specimens caught off the Madeira Archipelago and mainland Portugal to link this species migratory path with its reproductive cycle. Furthermore, a pilot study using Mozambique tilapia (Oreochromis mossambicus) was designed to evaluate the effect of sample freshness on steroid levels because black scabbardfish blood was collected at separate times after specimens were caught. The changes in T and 11-KT concentrations between the time of blood extraction and the time after preservation did not statistically differ among the different methods applied. Therefore, measured black scabbardfish steroid concentrations were directly used in the subsequent data analyses. In females, E2 and in T concentrations peaked at a late stage of vitellogenesis. E2 concentration was significantly different between females caught off each area. Clustering E2 and T concentrations from all developing females resulted in the separation of two distinct groups, independently of their geographical area. In males, T and 11-KT were not significantly different between maturity stages. The hepatosomatic index of males caught off mainland Portugal was relatively high. This may reflect a mechanism for storing energy that will later be consumed during migration to the spawning grounds. The trend of sex steroids concentrations throughout the sexual maturation of the species is consistent with the morphological indicators and shows evidence of the reproductive and migratory pattern hypothesised for the black scabbardfish in NE Atlantic.
- Published
- 2021
18. Genetic population structure of the Blackspot seabream (Pagellus bogaraveo): contribution of mtDNA control region to fisheries management
- Author
-
Robalo, Joana I., primary, Farias, Inês, additional, Francisco, Sara M., additional, Avellaneda, Karen, additional, Castilho, Rita, additional, and Figueiredo, Ivone, additional
- Published
- 2021
- Full Text
- View/download PDF
19. Morphometric ratios of six commercially landed species of skate from the Portuguese continental shelf, and their utility for identification
- Author
-
Serra-Pereira, Bárbara, Farias, Inês, Moura, Teresa, Gordo, Leonel Serrano, Santos, Miguel, and Figueiredo, Ivone
- Published
- 2010
- Full Text
- View/download PDF
20. Estimation of Risk Assessment of Some Heavy Metals Intake Through Black Scabbardfish (Aphanopus carbo) Consumption in Portugal
- Author
-
Cardoso, Carlos, Farias, Inês, Costa, Valentina, Nunes, Maria, and Gordo, Leonel
- Published
- 2010
- Full Text
- View/download PDF
21. REPORT OF THE WORKING GROUP ON THE BIOLOGY AND ASSESSMENT OF DEEP-SEA FISHERIES RESOURCES (WGDEEP)
- Author
-
Berg, Erik, Díez, Guzmán, Farias, Inês, Figueiredo, Ivone, Hallfredsson, Elvar Halldor, Hege Overboe Hansen, Heggebakken, Lise, Helle, Kristin, Gil-Herrera, Juan, Wendell, Medeiros Leal, Lorance, Pascal, Miller, David, Ofstad. Lise Helen, Pastoors, M.A., Almón, Bruno, Rui-Pinho, Mario, Régis, Souzasantos, Skúvadal,Fróði B., Sonjudóttir, Anika, Vasconcelos, Joana, Vieira, Rui, and Woods, Pamela
- Subjects
Sede Central IEO ,Pesquerías - Published
- 2020
22. Report of the Working Group on Biological Parameters (WGBIOP) 2020
- Author
-
Godiksen, Jane Aaestad, Allegaert, Wim, Beier, Ulrika, Bekaert, K. (Karen), Canha, A.M.L. (Ángela M.L.), Carbonara, P. (Pierluigi), Davies, J.L. (Julie Coad), Farias, Inês, Follesa, M.C. (Maria Cristina), Gault, Mandy, Gillespie-Mules, R. (Ruadhán), Haase, S. (Stephanie), Hilvarsson, A. (Annelie), Hüssy, K. (Karin), Korta, M. (María), Krüger-Johnsen, M. (María), Krumme, U. (Uwe), Landa, J. (Jorge), Mahé, K. (Kélig), Maxwell, David, McCormick, Helen, Mirny, Zuzanna, Nunes, C. (Cristina), Ofridopoulou, Konstantina, Pérez-Rodríguez, A. (Alfonso), Piñeiro-Álvarez, C.G. (Carmen Gloria), Raid, Tiit, Raitaniemi, J. (Jari), Sapounidis, Argyris, Sauger, Carine, and Torres-Cutillas, P. (Pedro)
- Subjects
Centro Oceanográfico de Santander ,Pesquerías - Published
- 2020
23. Report of the Working Group on Biological Parameters (WGBIOP) 2020
- Author
-
Carbonara, P. (Pierluigi), Coad Davies, J., van Damme, C.J.G. (Cindy), Aanestad, J., Allegaert, Wim, Beier, U., Bekaert, Karen, Canha, A.M.L., Carbonara, Pierluigi, Davies, Julie Coad, Farias, Inês, Follesa, Maria Cristina, Gault, Mandy, Gillespie-Mules, Ruadhán, Haase, Stephanie, Hilvarsson, Annelie, Hüssy, Karin, Korta, María, Krüger-Johnsen, María, Krumme, Uwe, Landa, Jorge, Mahé, Kélig, Maxwell, David, McCormick, Helen, Mirny, Zuzanna, Nunes, Cristina, Ofridopoulou, Konstantina, Pérez-Rodríguez, Alfonso, Piñeiro-Álvarez, Carmen Gloria, Raid, Tiit, Raitaniemi, Jari, Sapounidis, Argyris, Sauger, Carine, Smith, J., Stransky, Christoph, Tomkiewicz, J., Torreele, Els, Torres-Cutillas, Pedro, Ulleweit, Jens, van Damme, Cindy, Visconti, V., Vxtale, Francesca, Carbonara, P. (Pierluigi), Coad Davies, J., van Damme, C.J.G. (Cindy), Aanestad, J., Allegaert, Wim, Beier, U., Bekaert, Karen, Canha, A.M.L., Carbonara, Pierluigi, Davies, Julie Coad, Farias, Inês, Follesa, Maria Cristina, Gault, Mandy, Gillespie-Mules, Ruadhán, Haase, Stephanie, Hilvarsson, Annelie, Hüssy, Karin, Korta, María, Krüger-Johnsen, María, Krumme, Uwe, Landa, Jorge, Mahé, Kélig, Maxwell, David, McCormick, Helen, Mirny, Zuzanna, Nunes, Cristina, Ofridopoulou, Konstantina, Pérez-Rodríguez, Alfonso, Piñeiro-Álvarez, Carmen Gloria, Raid, Tiit, Raitaniemi, Jari, Sapounidis, Argyris, Sauger, Carine, Smith, J., Stransky, Christoph, Tomkiewicz, J., Torreele, Els, Torres-Cutillas, Pedro, Ulleweit, Jens, van Damme, Cindy, Visconti, V., and Vxtale, Francesca
- Abstract
The main objective of the Working Group on Biological Parameters (WGBIOP) is to review the status, issues, developments, and quality assurance of biological parameters for use in assess-ments and management that are in line with the requirements of end-users. In this final year of the three-year term, WGBIOP operated under challenging circumstances due to COVID-19 measures. The initial action plan was replaced by a more flexible one, where online plenary and subgroup meetings were spread over the year with intersessional work to finalize the proposed deliverables. WGBIOP continued the review of past exchanges and workshops under the remit of the working group. Since 2019, these calibrations on age, maturity, and larvae identification have been carried out in SmartDots, an online platform for sharing images and facilitating the reading of otoliths, staging of gonads, and identification of early life stages. Developments are underway to include an improved calculation of modal age and error matrices in the SmartDots standard report. WGBIOP investigated ways to incorporate error matrices into assessments and studied the effect of this inclusion together with stock assessors. Requests for new exchanges and workshops were reviewed, with a focus on stocks to be bench-marked in the coming years. Issue lists were scrutinized, problems identified, and information provided to stock coordinators via regular channels and through the Stock Identification Data-base (SID). Despite close cooperation with stock assessors and continued efforts, it has not been possible to further streamline the WGBIOP workflow with the benchmark process. This will be addressed with the Advisory Committee. The need for validation studies was stressed by the repeated low levels of agreement between readers of some stocks and recurring issues and recommendations to WGBIOP. Lack of resources is the main obstacle. As a first step for measures to prioritize validation studies, WGBIOP iden-tified precision
- Published
- 2020
24. Growth and maturity of the lesser‐spotted dogfish Scyliorhinus canicula (Linnaeus, 1758) in the southern Portuguese continental coast.
- Author
-
Moreira, Inês, Figueiredo, Ivone, Farias, Inês, Lagarto, Neide, Maia, Catarina, Robalo, Joana, and Moura, Teresa
- Subjects
COASTS ,FEMALES ,MALES ,CHONDRICHTHYES ,VERTEBRAE - Abstract
Growth and reproductive parameters were estimated for Scyliorhinus canicula from the south‐western Portuguese coast. The sample consisted of 148 specimens with total length ranging from 187 to 580 mm (82 males and 66 females). Maximum ages assigned to males and females were 12 and 13 years, respectively. Linf and k were estimated as 63.6 cm and 0.16 year−1 for males and 63.2 and 0.15 year−1 for females. Length and age at first maturity were estimated as 42.6 cm and 6 years for males and 44.5 cm and 7 years for females. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
25. Registros de representação semiótica: identificando representações e apreensões no estudo de trigonometria no triângulo retângulo
- Author
-
Berlanda, Juliane Carla and Farias, Inês
- Subjects
Libros de texto ,Trigonométricas ,Semiótica ,Gráfico - Abstract
Com o presente artigo, decorrente de uma pesquisa de mestrado, pretende-se, por meio da teoria dos registros de representação semiótica discutir, a partir de atividades encontradas em livros didáticos, aspectos relacionados às representações e apreensões em geometria tendo como objeto matemático a trigonometria no triângulo retângulo. Tais elementos auxiliam na compreensão de como se dá a aprendizagem de geometria e, consequentemente, seu estudo pode minimizar algumas dificuldades encontradas no percurso de ensinar. Nessa perspectiva, este trabalho se constitui a partir de atividades selecionadas em dois livros didáticos do 1º ano do ensino médio que fizeram parte do Programa Nacional do Livro Didático - PNLD (2014-2016). Nestas atividades foi possível observar a correlação com a teoria de registros de representação semiótica, de acordo com aspectos elencados da mesma. Dessa forma, espera-se contribuir com subsídios para a identificação em outras atividades que envolvam o objeto matemático em questão.
- Published
- 2019
26. Report of the Working Group on the Biology and Assessment of Deep-sea Fisheries Resources (WGDEEP)
- Author
-
Berg, Erik, Christensen, Helle Torp, Díez, Guzmán, Farias, Inês, Figueiredo, Ivone, Halldor, Elvar, Øverbøe Hansen, Hege, Heggebakken, Lise, Helle, Kristin, Gil-Herrera, Juan, Lorance, Pascal, Moura, Teresa, Nielsen, Julius, Ofstad, Lise Helle, Pastoors, M.A., Almón, Bruno, Rui-Pinho, Mario, de Pinho, Rilho, Thorlacius, Magnus, Vieira, Rui, and Woods, Pamela
- Subjects
Sede Central IEO ,Pesquerías - Published
- 2019
27. Reproductive strategies in black scabbardfish (Aphanopus carbo Lowe, 1839) from the NE Atlantic
- Author
-
Neves, Ana, Vieira, Ana Rita, Farias, Inês, Figueiredo, Ivone, Sequeira, Vera, and Serrano Gordo, Leonel
- Subjects
lcsh:SH1-691 ,skip spawning ,Portugal ,urogenital system ,fecundity ,SH1-691 ,atresia ,portugal ,lcsh:Aquaculture. Fisheries. Angling ,sable negro ,skipped spawning ,Aquaculture. Fisheries. Angling ,black scabbardfish ,fecundidad - Abstract
Gonads of the NE Atlantic black scabbardfish were examined to give an insight into the reproductive biology of this species. It was concluded that black scabbardfish had determinate fecundity because: (i) a distinct hiatus in oocyte size was observed between pre-vitellogenic and vitellogenic oocytes; (ii) vitellogenic oocytes increased in size during the spawning season; (iii) the number of vitellogenic oocytes did not increase during the spawning season; and (iv) the intensity of atresia was low in pre-spawning and spawning ovaries. Fecundity estimates ranged from 73 to 373 oocytes g-1 female. Comparison of developing ovaries from mainland Portugal and Madeira revealed that those from Madeira were more advanced in development, with more cortical alveoli stage oocytes and a higher gonadosomatic index. Starting in July, the reproductive development of all females from mainland Portugal was interrupted by a generalised atresia of developing oocytes. Completion of gametogenesis and spawning only occurred for fish from Madeira but some fish from this area also failed to complete oocyte development due to mass follicular atresia of vitellogenic oocytes. The percentage of Madeiran fish that failed to spawn due to follicular atresia ranged from 21.2% in 2006 to 37.4% in 2005. Las gónadas del sable negro del Atlántico nordeste fueron examinadas para conocer la biología reproductiva de esta especie. Los resultados sobre el tipo de fecundidad mostraron que la especie tenía una fecundidad determinada en base a los siguientes hechos: (i) hiato entre ovocitos previtelogénicos y vitelogénicos; (ii) aumento de tamaño de los ovocitos vitelogénicos durante el período de puesta; (iii) ausencia de incremento en el número permanente de ovocitos vitelogénicos avanzados durante el período de puesta y (iv) una pequeña atresia en los ovarios antes de la ovulación y durante ella. Las estimaciones de fecundidad se establecieron entre 73 y 373 ovocitos g-1 hembra. La comparación de los ovarios de hembras en desarrollo de aguas frente a Portugal continental y las de Madeira mostró una diferencia significativa en el tamaño medio de los ovocitos entre las dos áreas, y que las hembras de Madeira presentaron una mayor cantidad de ovocitos con alvéolos corticales y un índice gonadosomático mayor. A partir de julio y en hembras recolectadas frente a Portugal de continente, todos los individuos comenzaron a sufrir una atresia generalizada en sus ovocitos, mientras que en las aguas de Madeira, el ciclo reproductivo continúa hasta ovulación. Sin embargo, en algunas hembras de Madeira la gametogénesis también se paraliza y todos los ovocitos vitelogénicos son absorbidos vía atresia folicular. El porcentaje de hembras no reproductivas varió del 21.23% en 2006 al 37.4% en 2005.
- Published
- 2009
- Full Text
- View/download PDF
28. Report of the Workshop on Growth-increment Chronologies in Marine Fish: climate-ecosystem interactions in the North Atlantic 2
- Author
-
Black, B., Stransky, C. (Christoph), Costa, R.M., Campana, S., Cerna, F., Moyano, G., Matras, U., de Pontual, H. (Hélène), Mahé, K. (Kélig), Anastasopoulou, K., Bolle, L., Geffen, A.J., Andrade, H., Folkvord, A. (Arild), Andersson, C., Bonitz, F., Trofimova, T., Melvik, V., Mirny, Zuzanna, Smolirinski, S., Tanner, S.E. (Susanne E.), Vasconcelos, R.P. (Rita P.), Duarte, F.M., Sequeira, A.L., Silva, A., Farias, Inês, Domínguez-Petit, R. (Rosario), Díaz, C., Campos, A., Barcala-Bellod, E. (Elena), Rey-Sanz, J. (Javier), Morales, B., Landa, J. (Jorge), Butler, P., Smith, J., and Rutterford, L.
- Subjects
Centro Oceanográfico de Santander ,Pesquerías - Published
- 2016
29. Can otolith elemental composition reveal special events in the life history of a deep-sea species?
- Author
-
Farias, Inês, Pérez-Mayol, Silvia, Palmer, Margarita, Morales-Nin, Beatriz, and Figueiredo, Ivone
- Abstract
Trabajo presentado en la ICES Annual Science Conference, celebrada en Riga, Letonia, del 19 al 23 de septiembre de 2016
- Published
- 2016
30. Black scabbardfish, Aphanopus carbo, in the northeast Atlantic: Distribution and hypothetical migratory cycle
- Author
-
Fundação para a Ciência e a Tecnologia (Portugal), European Commission, Farias, Inês, Morales-Nin, Beatriz, Lorance, Pascal, Figueiredo, Ivone, Fundação para a Ciência e a Tecnologia (Portugal), European Commission, Farias, Inês, Morales-Nin, Beatriz, Lorance, Pascal, and Figueiredo, Ivone
- Abstract
The biology, ecology, and dynamics of the deep-sea teleost black scabbardfish in the northeast Atlantic are reviewed. The black scabbardfish is a commercial bathypelagic species found in the NE Atlantic mostly from Iceland to the Canary Islands and Western Sahara, at depths from 800 to 1300 m. The spatial structure of its population is still uncertain, although the existence of one single stock that migrates around the NE Atlantic driven by feeding and reproduction is the most likely hypothesis consistent with available data. This review is based on data from commercial fisheries off the Faroe Islands, Hatton Bank, the west of the British Isles, and Portugal (mainland, Azores, and Madeira) and from Icelandic and Scottish scientific surveys collected between 1988 and 2012. Spawning of black scabbardfish occurs around Madeira and the Canary Archipelagos during the last quarter of the year. According to the migratory hypothesis, eggs, larvae, and possibly juveniles move north to areas from south of Icelandic and Faroe Islands to the west of the British Isles where they remain for some years to feed and grow. Then, they move south to the area off mainland Portugal, where they reach the size of first maturity but do not reproduce, and later move further south to the spawning grounds. Further studies are needed to understand which of the environmental conditions prevailing around Madeira and the Canaries, but not elsewhere, allow this species to mature and subsequently reproduce. This review suggests that a multidisciplinary approach is required to confirm the spatiotemporal migration and habitats used by black scabbardfish populations in the NE Atlantic at different life stages. Otolith contour shape and microchemistry, fatty acids, carbon and nitrogen stable isotopes, as well as steroid hormones are proposed as promising alternative tools for responding to this challenge. © 2013 EDP Sciences, IFREMER, IRD.
- Published
- 2013
31. Age and growth of black scabbardfish (Aphanopus carbo Lowe, 1839) in the southern NE Atlantic
- Author
-
Vieira, Ana Rita, Farias, Inês, Figueiredo, Ivone, Neves, Ana, Morales-Nin, Beatriz, Sequeira, Vera, Martins, Maria Rogélia, Serrano Gordo, Leonel, Vieira, Ana Rita, Farias, Inês, Figueiredo, Ivone, Neves, Ana, Morales-Nin, Beatriz, Sequeira, Vera, Martins, Maria Rogélia, and Serrano Gordo, Leonel
- Abstract
[EN] Though whole otoliths are commonly adopted in age assignment of black scabbardfish, this study showed that sectioned otoliths are more appropriate because growth increments are more evident and ageing of larger specimens is easier. Vertebrae are not the most appropriate structure for ageing but, in the absence of otoliths, this structure may be useful in age assignment of this species. To verify possible differences between age and growth among specimens from the southern NE Atlantic, 1075 sectioned otoliths from specimens from mainland Portugal, 436 from Madeira and 107 from the Azores were analysed and the distribution of length-at-age obtained for each sex and region was determined. Significant differences were obtained in the comparison of the distribution of length-at-age between Madeira, the mainland and the Azores. The von Bertalanffy growth model was applied to back-calculated mean length-at-age data from Madeira (Lt = 1586 [1 – e –0.119(t+2.282)] females; Lt = 1461 [1 – e –0.146(t+1.441)] males) and mainland (Lt = 1354 [1 – e –0.170(t+2.040)] females; Lt = 1240 [1 – e –0.208(t+1.654)] males), and significant differences in the growth equations were obtained. Furthermore, a regression tree model was used to investigate how growth is conditioned by reproduction. results showed a clear separation between individuals from the two areas, both females and males from the mainland (non-reproductive individuals) being characterised by a lower gonadosomatic index and a lower age, [ES] A pesar de que los otolitos enteros son adoptados normalmente en lecturas de edad del sable negro, este estudio mostró que los otolitos seccionados son más apropiados porque los incrementos de crecimiento son más evidentes y facilita la asignación de edad en los peces de mayor talla. Las vértebras no son las estructuras más apropiadas para asignar la edad del sable negro, pero en ausencia de otolitos, esta estructura puede resultar de utilidad en dicho proceso. Para verificar posibles diferencias entre la edad y el crecimiento de especimenes viviendo en el sur del Atlántico nordeste, 1075 otolitos seccionados de ejemplares de sable negro de Portugal continental, 436 de Madeira y 107 de Azores fueron analizados, y se obtuvieron las distribuciones de tallas por edad por sexo, en cada región. Fueron observadas diferencias significativas en la comparación de las distribuciones de talla por edad entre Madeira, continente y Azores. El modelo de crecimiento de von Bertalanffy fue aplicado a los datos retrocalculados de talla media por grupo de edad de Madeira (Lt = 1586 [1 – e –0.119(t+2.282)] hembras; Lt = 1461 [1 – e –0.146(t+1.441)] machos) y continente (Lt = 1354 [1 – e –0.170(t+2.040)] hembras; Lt = 1240 [1 – e –0.208(t+1.654)] machos), y fueran encontradas diferencias significativas en las ecuaciones de crecimiento. Además, un modelo de árbol de regresión fue utilizado para estudiar cómo el crecimiento es condicionado por la reproducción. Los resultados mostraron una separación clara entre individuos de las dos áreas, caracterizándose tanto las hembras como los machos del continente (individuos no reproductivos) por un índice gonadosomatico y una edad más baja.
- Published
- 2009
32. Black scabbardfish,Aphanopus carbo, in the northeast Atlantic: distribution and hypothetical migratory cycle
- Author
-
Farias, Inês, primary, Morales-Nin, Beatriz, additional, Lorance, Pascal, additional, and Figueiredo, Ivone, additional
- Published
- 2013
- Full Text
- View/download PDF
33. Discriminating bluemouth, Helicolenus dactylopterus (Pisces: Sebastidae), stocks in Portuguese waters by means of otolith shape analysis
- Author
-
Neves, Ana, primary, Sequeira, Vera, additional, Farias, Inês, additional, Vieira, Ana Rita, additional, Paiva, Rafaela, additional, and Gordo, Leonel Serrano, additional
- Published
- 2010
- Full Text
- View/download PDF
34. The development of the oviducal gland in the Rajid thornback ray, Raja clavata
- Author
-
Serra-Pereira, Bárbara, primary, Afonso, Fernando, additional, Farias, Inês, additional, Joyce, Pedro, additional, Ellis, Megan, additional, Figueiredo, Ivone, additional, and Gordo, Leonel Serrano, additional
- Published
- 2010
- Full Text
- View/download PDF
35. Otolith shape analysis as a tool for stock discrimination of the black scabbardfish, Aphanopus carbo Lowe, 1839 (Pisces: Trichiuridae), in Portuguese waters
- Author
-
Farias, Inês, primary, Vieira, Ana Rita, additional, Serrano Gordo, Leonel, additional, and Figueiredo, Ivone, additional
- Published
- 2009
- Full Text
- View/download PDF
36. Age and growth of black scabbardfish (Aphanopus carbo Lowe, 1839) in the southern NE Atlantic
- Author
-
Vieira, Ana Rita, primary, Farias, Inês, additional, Figueiredo, Ivone, additional, Neves, Ana, additional, Morales-Nin, Beatriz, additional, Sequeira, Vera, additional, Martins, Maria Rogélia, additional, and Serrano Gordo, Leonel, additional
- Published
- 2009
- Full Text
- View/download PDF
37. Mercury, cadmium and lead in black scabbardfish (Aphanopus carbo Lowe, 1839) from mainland Portugal and the Azores and Madeira archipelagos
- Author
-
Costa, Valentina, primary, Lourenço, Helena Maria, additional, Figueiredo, Ivone, additional, Carvalho, Lucília, additional, Lopes, Humberto, additional, Farias, Inês, additional, Pires, Luís, additional, Afonso, Cláudia, additional, Vieira, Ana Rita, additional, Nunes, Maria Leonor, additional, and Serrano Gordo, Leonel, additional
- Published
- 2009
- Full Text
- View/download PDF
38. Stock structure of black scabbardfish (Aphanopus carbo Lowe, 1839) in the southern northeast Atlantic
- Author
-
Serrano Gordo, Leonel, primary, Baptista, Irineu, additional, Carvalho, Lucília, additional, Costa, Valentina, additional, Cruz, Cristina, additional, Eiras, Jorge C., additional, Farias, Inês, additional, Figueiredo, Ivone, additional, Lourenço, Helena, additional, Bordalo-Machado, Pedro, additional, Neves, Ana, additional, Nunes, Maria Leonor, additional, Reis, Sara, additional, Santos, Maria João, additional, Saraiva, Aurélia, additional, and Vieira, Ana Rita, additional
- Published
- 2009
- Full Text
- View/download PDF
39. Variación ontogénica en la dieta y estrategia alimentaria de Raja undulata Lacepède, 1802 (Chondrichthyes: Rajidae) en la plataforma continental portuguesa
- Author
-
Moura, Teresa, primary, Figueiredo, Ivone, additional, Farias, Inês, additional, Serra-Pereira, Bárbara, additional, Neves, Ana, additional, Borges, Maria De Fátima, additional, and Serrano Gordo, Leonel, additional
- Published
- 2008
- Full Text
- View/download PDF
40. The use of caudal thorns for ageing Raja undulata from the Portuguese continental shelf, with comments on its reproductive cycle
- Author
-
Moura, Teresa, primary, Figueiredo, Ivone, additional, Farias, Inês, additional, Serra-Pereira, Bárbara, additional, Coelho, Rui, additional, Erzini, Karim, additional, Neves, Ana, additional, and Gordo, Leonel Serrano, additional
- Published
- 2007
- Full Text
- View/download PDF
41. Diet comparison of four ray species (Raja clavata, Raja brachyura, Raja montaguiandLeucoraja naevus) caught along the Portuguese continental shelf
- Author
-
Farias, Inês, primary, Figueiredo, Ivone, additional, Moura, Teresa, additional, Serrano Gordo, Leonel, additional, Neves, Ana, additional, and Serra-Pereira, Bárbara, additional
- Published
- 2006
- Full Text
- View/download PDF
42. Black scabbardfish, Aphanopus carbo, in the northeast Atlantic: distribution and hypothetical migratory cycle.
- Author
-
Farias, Inês, Morales-Nin, Beatriz, Lorance, Pascal, and Figueiredo, Ivone
- Subjects
- *
FISH migration , *FISH feeds , *FISH reproduction , *FISH spawning , *DEEP-sea fishes , *OSTEICHTHYES - Abstract
The biology, ecology, and dynamics of the deep-sea teleost black scabbardfish in the northeast Atlantic are reviewed. The black scabbardfish is a commercial bathypelagic species found in the NE Atlantic mostly from Iceland to the Canary Islands and Western Sahara, at depths from 800 to 1300 m. The spatial structure of its population is still uncertain, although the existence of one single stock that migrates around the NE Atlantic driven by feeding and reproduction is the most likely hypothesis consistent with available data. This review is based on data from commercial fisheries off the Faroe Islands, Hatton Bank, the west of the British Isles, and Portugal (mainland, Azores, and Madeira) and from Icelandic and Scottish scientific surveys collected between 1988 and 2012. Spawning of black scabbardfish occurs around Madeira and the Canary Archipelagos during the last quarter of the year. According to the migratory hypothesis, eggs, larvae, and possibly juveniles move north to areas from south of Icelandic and Faroe Islands to the west of the British Isles where they remain for some years to feed and grow. Then, they move south to the area off mainland Portugal, where they reach the size of first maturity but do not reproduce, and later move further south to the spawning grounds. Further studies are needed to understand which of the environmental conditions prevailing around Madeira and the Canaries, but not elsewhere, allow this species to mature and subsequently reproduce. This review suggests that a multidisciplinary approach is required to confirm the spatiotemporal migration and habitats used by black scabbardfish populations in the NE Atlantic at different life stages. Otolith contour shape and microchemistry, fatty acids, carbon and nitrogen stable isotopes, as well as steroid hormones are proposed as promising alternative tools for responding to this challenge. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
43. The development of the oviducal gland in the Rajid thornback ray, Raja clavata.
- Author
-
Serra-Pereira, Bárbara, Afonso, Fernando, Farias, Inês, Joyce, Pedro, Ellis (nee Storrie), Megan, Figueiredo, Ivone, and Gordo, Leonel
- Subjects
CHONDRICHTHYES ,OVIPARITY ,FISH reproduction ,SPERMATOZOA - Abstract
The reproductive processes of chondrichthyans are complex. Knowledge of the development and maturation of the oviducal gland is vital for understanding the reproductive biology of a species. This study represents the first contribution of this subject for skates. In the oviparous thornback ray, Raja clavata, oviducal gland development begins early in the developing stage with the formation of gland tubules and the distinct lamellae of each zone: club, papillary, baffle and terminal. Oviducal development is complete by the end of the developing stage when the storage and secretion of products is evident within the gland tubules of each zone. Periodic acid-Schiff and alcian blue histological staining showed that the secretory mucous cells of the club and papillary zones produce neutral and sulfated acid mucins. The last row of gland tubules of the papillary zone stains intensely for sulfated acid mucins. The baffle zone, which is responsible for the production of the egg capsule, represented 60-80% of the glandular zone of the oviducal gland. Sperm bundles were observed in the deeper recesses of the baffle zone during the maturation process, and during capsule extrusion, sperm were detected near the lumen. The terminal zone was composed of two types of gland tubules: serous (producing protein fibres) and mucous glands (producing sulfated acid mucins). [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
44. Discriminating bluemouth, Helicolenus dactylopterus (Pisces: Sebastidae), stocks in Portuguese waters by means of otolith shape analysis.
- Author
-
Neves, Ana, Sequeira, Vera, Farias, Inês, Vieira, Ana Rita, Paiva, Rafaela, and Gordo, Leonel Serrano
- Abstract
The understanding of the stock structure of a species is essential to effectively manage fisheries. Otolith shape analysis has been successfully applied in stock identification using the elliptic Fourier analysis. This method was used to assess possible differences in the otolith shape of Helicolenus dactylopterus caught around the Azores, Madeira and mainland Portugal. A total of 294 individuals ranging from 23 to 29 cm in total length, equally distributed by sex and area, were analysed. The multivariate analysis of variance performed on the otolith normalized elliptic Fourier descriptors (NEFDs) revealed significant differences for both area and sex, but no interaction was found between the two factors. In the canonical discriminant analysis an overall classification success of 69.4% and 66.7% was achieved for females and males respectively. These results suggest the usefulness of otolith shape analysis for stock differentiation of bluemouth from Portuguese waters. [ABSTRACT FROM PUBLISHER]
- Published
- 2011
- Full Text
- View/download PDF
45. Diet comparison of four ray species (Raja clavata, Raja brachyura, Raja montaguiand Leucoraja naevus) caught along the Portuguese continental shelf
- Author
-
Farias, Inês, Figueiredo, Ivone, Moura, Teresa, Serrano Gordo, Leonel, Neves, Ana, and Serra-Pereira, Bárbara
- Abstract
Data on the diet of species are important for understanding ecosystem dynamics and are fundamental for the implementation of recent approaches in stock assessment and consequently for the establishment of more ecological management measures. In mainland Portugal, as in most European countries, skates and rays represent an important proportion of commercial landings. The four main species landed are Raja clavataand Raja brachyura, followed by Leucoraja naevusand Raja montagui. This paper analyses their diets based on the examination of stomach contents. Food items were identified to the lowest identifiable taxon and were further assembled into major taxonomic groups designated as prey. Intra- and interspecific comparisons were made according to size and sex. All four species had generalized diets with differences in prey preference among them. Decapods and bony fish were the most frequent prey. Furthermore, an ontogenetic dietary shift was evident in all species at around 45−55 cm total length. Both intra- and interspecific differences observed seem to be related to size and morphological characteristics of the species, as well as type of dentition. These variations allow different species, as well as small and large specimens from the same species, to exploit a larger diversity of habitats.
- Published
- 2006
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.