45 results on '"Fernandez-Silva, Iria"'
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2. Population differentiation across small distances in a coral reef-associated vermetid (Ceraesignum maximum) in Palau
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Soliman, Taha, Fernandez-Silva, Iria, Kise, Hiroki, Kurihara, Haruko, and Reimer, James Davis
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- 2019
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3. Phylogeny of deepwater snappers (Genus Etelis) reveals a cryptic species pair in the Indo-Pacific and Pleistocene invasion of the Atlantic
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Andrews, Kimberly R., Williams, Ashley J., Fernandez-Silva, Iria, Newman, Stephen J., Copus, Joshua M., Wakefield, Corey B., Randall, John E., and Bowen, Brian W.
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- 2016
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4. Global divergence of the human follicle mite Demodex folliculorum : Persistent associations between host ancestry and mite lineages
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Palopoli, Michael F., Fergus, Daniel J., Minot, Samuel, Pei, Dorothy T., Simison, W. Brian, Fernandez-Silva, Iria, Thoemmes, Megan S., Dunn, Robert R., and Trautwein, Michelle
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- 2015
5. Yellow tails in the Red Sea: phylogeography of the Indo-Pacific goatish Mulloidichthys flavolineatus reveals isolation in peripheral provinces and cryptic evolutionary lineages
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Fernandez-Silva, Iria, Randall, John E., Coleman, Richard R., DiBattista, Joseph D., Rocha, Luiz A., Reimer, James D., Meyer, Carl G., and Bowen, Brian W.
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- 2015
6. Genetic population structure and low genetic diversity in the over-exploited sea cucumber Holothuria edulis Lesson, 1830 (Echinodermata: Holothuroidea) in Okinawa Island
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Soliman, Taha, Fernandez-Silva, Iria, and Reimer, James Davis
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- 2016
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7. Exploring the trends of adaptation and evolution of sclerites with regards to habitat depth in sea pens
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Kushida, Yuka, primary, Imahara, Yukimitsu, additional, Wee, Hin Boo, additional, Fernandez-Silva, Iria, additional, Fromont, Jane, additional, Gomez, Oliver, additional, Wilson, Nerida, additional, Kimura, Taeko, additional, Tsuchida, Shinji, additional, Fujiwara, Yoshihiro, additional, Higashiji, Takuo, additional, Nakano, Hiroaki, additional, Kohtsuka, Hisanori, additional, Iguchi, Akira, additional, and Reimer, James Davis, additional
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- 2022
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8. Vitrumanthus vanderlandi Kise & Montenegro & Santos & Hoeksema & Ekins & Ise & Higashiji & Fernandez-Silva & Reimer 2022, SP. NOV
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Vitrumanthus vanderlandi ,Cnidaria ,Animalia ,Vitrumanthus ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
VITRUMANTHUS VANDERLANDI SP. NOV. (FIG. 7A–F) Z o o b a n k r e g i s t r a t i o n: u r n: l s i d: z o o b a n k. org:act: CE659473-CB9F-462B-97F7-4B974FAE96B9. Material examined: Holotype: RMNH.COEL.42623, CANCAP-VII Expedition Station CV 7.041, Cape Verde Islands, SãoTiago, Ilheus Rombos, east of Cima, 14°56 ′ 59 ″ N, 24°37 ′ 59 ″ W, Agassiz trawl, at a depth of 700–800 m, coll. RV HNIMS Tydeman, 24 Aug 1986, fixed in 99.5% ethanol. Paratype: RMNH.COEL.42624, CANCAP-VII Expedition Station CV 7.041, Cape Verde Islands, SãoTiago, Ilheus Rombos, east of Cima, 14°56 ′ 59 ″ N, 24°37 ′ 59 ″ W, Agassiz trawl, at a depth of 580 m depth, coll. RV HNIMS Tydeman, 24 Aug 1986. Other material examined: RMNH.COEL.42625, Equalant II Expedition to the Gulf of Guinea, as part of the ICITA Programme (International Cooperative Investigations of the Tropical Atlantic), Sta. 18/8, 38 km off Liberia, 4°25 ′ N, 8°29 ′ W, trawl at a depth range of 380–510 m, on RV Geronimo Cruise 2, 31 Oct 1963, fixed in 99.5% ethanol. Etymology: This species is named in honour of Dr Jacob van der Land, expedition leader of the CANCAP-VII expedition off the coast of West Africa (Van der Land, 1987), during which the type specimens of this species were collected. The Japanese name is 'Hime-ruri-sunaginchaku'. Description: External morphology. Thirty-two cylindrical polyps in preserved specimen. Base of polyps embedded in Aphrocallistes sponge. Solitary polyps arise irregularly from host hexactinellid sponge. Preserved polyps cream white in coloration. Surface of column smooth, and ectoderm continuous. Ectoderm of polyps partially encrusted with small size of sand and silica particles. Transparent capitulum contracted and rounded. Contracted preserved polyps 0.3–2.5 mm in height, 0.8–3.0 mm in diameter. Capitulary ridges indiscernible when contracted. Approximately 20 tentacles in number. Internal morphology. Zooxanthellae absent. Cyclically transitional marginal musculature. Mesoglea thickness 0.2–1.1 mm. Mesoglea thicker than ectoderm and endoderm. Siphonoglyph distinct and V-shaped. Mesenterial filaments present. Cnidae. Basitrichs and microbasic b-mastigophores, microbasic p-mastigophores and spirocysts (Fig. 5C; Table 2). Distribution and habitats: West Africa: Guinea and Cape Verde at depths of 580– 800 m. Associated host: Aphrocallistes beatrix Gray, 1858, Aphrocallistes sp. Remarks: Vitrumanthus vanderlandi is phylogenetically close to V. oligomyarius, but these two species can be distinguished by dimensions of polyps and the numbers of tentacles. Vitrumanthus vanderlandi and V. oligomyaria are also associated with different host hexactinellid sponges (Aphrocallistes species vs. Tretochone duplicata). Moreover, V. vanderlandi does not have any holotrich nematocysts in all tissues we examined, while other species of Vitrumanthus have holotrich nematocysts present in some tissues. Although the in situ polyp colour of V. vanderlandi is unknown, Buhl-Mortensen et al. (2017) have reported yellowed zoantharians that were observed on A. beatrix collected from the Gulf of Guinea. Therefore, the coloration of polyps of this species may be yellow. Further investigations with newly collected specimens are needed to confirm the in situ morphology of V. vanderlandi.
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- 2021
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9. Churabana kuroshioae Kise & Montenegro & Santos & Hoeksema & Ekins & Ise & Higashiji & Fernandez-Silva & Reimer 2022, SP. NOV
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Churabana kuroshioae ,Churabana ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
CHURABANA KUROSHIOAE SP. NOV. (FIG. 4A���I) Synonymy: Parazoanthidae sp. 1 ��� Reimer et al., 2019: 7, fig. 2A. Zoobank registration: u r n: l s i d: z o o b a n k. org:act: FC503255-BDC2-45C5-9788-41F52BC40FA5. Material examined: Holotype: RUMF-ZG-04447, near Iejima Island, Motobu, Okinawa, Japan, 26��54 ��� 53.6 ��� N, 127��37 ��� 50.9 ��� E, 600���650 m, baskets, coll. T. Higashiji on vessel Daini-kuroshio-maru, 2 March 2018, divided into two pieces, one portion fixed in 5���10% saltwater formalin and other in 99.5% ethanol. Paratype: RUMF-ZG-04448, near Iejima Island, Motobu, Okinawa, Japan, 26��54���53.6 ��� N, 127��37 ��� 50.9 ��� E, 600���650 m, baskets, coll. T. Higashiji on vessel Dainikuroshio-maru, 2 March 2018, fixed in 99.5% ethanol. MISE-JMG51J (NSMT-Co 1754), Nanpo Trough, Kikaijima Island, Kagoshima, Japan, 28��20 ��� 21.64 ��� N, 129��57 ��� 14.56 ��� E, depth 520 m, ROV, coll. Javier Montenegro on RV Natsushima, 14 Oct 2011, fixed in 99.5% ethanol. Etymology: The species is named after the Dainik u r o s h i o -m a r u, a s t h e t y p e s p e c i m e n s w e r e collected by this vessel. The Japanese name is 'Beni-chura-tama-sunaginchaku'. Description: External morphology. Four truncated cone-shaped or cylindrical polyps in preserved specimen. The polyp bases embedded within the sponge Pararete Ijima, 1927. Solitary polyps arise irregularly from Pararete specimens. The living polyps cream-pink or beige and tentacles cream or whitish transparent in coloration. Preserved polyps beige and partially red. Surface of column rough and ectoderm continuous. Ectoderm and mesoglea of polyps encrusted with numerous and various sizes of sand and silica particles. The living expanded oral disks c. 1.5��� 2.0 mm in diameter, expanded polyps c. up to 10 mm in height, 4.0���5.0 mm in diameter. Preserved contracted preserved polyps 3.0���4.0 mm in height, 2.8���4.0 mm in diameter. Capitulary ridges discernible, 15���16 in number when contracted. 30���32 tentacles in number. Internal morphology. Zooxanthellae absent. Cteniform endodermal marginal musculature. Encircling sinus present and basal canals of mesenteries absent. Mesenteries thin, 30���32 in macrocnemic arrangement. Mesoglea thickness 0.5���1.6 mm. Mesoglea thicker than ectoderm and endoderm. Siphonoglyph distinct and U-shaped. Mesenterial filaments present. Cnidae. Basitrichs and microbasic b-mastigophores, microbasic p-mastigophores, holotrichs and spirocysts (Fig. 5A; Table 2). Distribution and habitats: Ryukyu Archipelago, Japan: Near Iejima Island, Okinawa and Nanpo Trough, Kikaijima Island, Kagoshima, Japan at depths of 520��� 650 m. Associated host: Pararete sp. 1 and Pararete sp. 2. R e m a r k s: C h u r a b a n a k u r o s h i o a e r e s e m b l e s Vitrumanthus species, but they can be easily separated by differences in their marginal musculatures (see also Remarks under Vitrumanthus)., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 333-336, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Reimer JD, Kise H, Santos MEA, Lindsay DJ, Pyle RL, Copus JM, Bowen BW, Nonaka M, Higashiji T, Benayahu Y. 2019. Exploring the biodiversity of understudied benthic taxa at mesophotic and deeper depths: examples from the order Zoantharia (Anthozoa: Hexacorallia). Frontiers in Marine Science 6: 305.","Ijima I. 1927. Hexactinellida of the Siboga expedition. In: Weber M, ed. Uitkomsten op zoologisch, botanisch, oceanographisch en geologisch gebied verzameld in Nederlandsch Oost-Indie 1899 - 1900, 6. Leiden: Brill, 1 - 138."]}
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- 2021
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10. Kauluzoanthus SINNIGER
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Kauluzoanthus ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
GENUS KAULUZOANTHUS SINNIGER ET AL., 2013 Type species: Kauluzoanthus kerbyi Sinniger et al., 2013 Diagnosis: Polyps do not contract when fixed. Characteristic insertion/deletion pattern in the 16S V5 region sensu Sinniger et al. (2005) (Sinniger et al., 2013)., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on page 341, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Sinniger F, Ocana OV, Baco AR. 2013. Diversity of zoanthids (Anthozoa: Hexacorallia) on Hawaiian seamounts: description of the Hawaiian gold coral and additional zoanthids. PLoS One 8: e 52607.","Sinniger F, Montoya-Burgos JI, Chevaldonne P, Pawlowski J. 2005. Phylogeny of the order Zoantharia (Anthozoa, Hexacorallia) based on the mitochondrial ribosomal genes. Marine Biology 147: 1121 - 1128."]}
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- 2021
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11. Kauluzoanthus undetermined
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Kauluzoanthus ,Animalia ,Biodiversity ,Zoantharia ,Kauluzoanthus undetermined ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
KAULUZOANTHUS SP. (FIG. 9A���B) Material examined: USNM 1424050, French Frigate Shoals, Hawaii (23��56.649 ��� N, 166��02.187 ��� W), 1225 m, ROV, coll. RV Okeanos Explorer, NOAA on 28 February 2016, fixed in 99.5% EtOH. Description: Non-encrusted azooxanthellate zoantharians. The examined specimen associated with Hyalonema sp. Preserved polyps cylindrical and c. 1.8���9.6 mm in height, 3.9���6.7 mm in diameter, with brown column in coloration. Thin coenenchyme completely covering stalk of Hyalonema sp. Capitulary ridges discernible, 14���16 in number when contracted. Tentacles relatively short, as long as expanded oral disk diameter. Numbers of tentacles 28���32. Associated host: Hyalonema sp. Distribution and habitats: North Pacific Ocean: French Frigate Shoals, Hawaii, at a depth of 1225 m. Remarks: The genus Kauluzoanthus is known to associate with the gold coral Kulamanamana haumeaae and with several octocoral species (Sinniger et al., 2013). However, our examined specimen was associated with Hyalonema sponges, and was genetically close to Ka. kerbyi based on the results in this study. This finding suggests that Kauluzoanthus species are not host-specific to Ku. haumeaae or other octocorals. However, we could not obtain any 16S-rDNA sequences, which contain the V5 region sensu Sinniger et al. (2005). Therefore, further integrated studies including morphological and ecological studies are needed to describe this putative new species., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 341-342, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Sinniger F, Ocana OV, Baco AR. 2013. Diversity of zoanthids (Anthozoa: Hexacorallia) on Hawaiian seamounts: description of the Hawaiian gold coral and additional zoanthids. PLoS One 8: e 52607.","Sinniger F, Montoya-Burgos JI, Chevaldonne P, Pawlowski J. 2005. Phylogeny of the order Zoantharia (Anthozoa, Hexacorallia) based on the mitochondrial ribosomal genes. Marine Biology 147: 1121 - 1128."]}
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- 2021
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12. Churabana Kise & Montenegro & Santos & Hoeksema & Ekins & Ise & Higashiji & Fernandez-Silva & Reimer 2022, GEN. NOV
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Churabana ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
GENUS CHURABANA GEN. NOV. (FIG. 4A���H) Z o o b a n k r e g i s t r a t i o n: u r n: l s i d: z o o b a n k. org:act: EACFCC05-EA56-4F04-94A2-FB716F22004C. Type species: Churabana kuroshioae sp. nov. by original designation. Diagnosis: Parazoanthidae with obligate symbiotic relationship with massive hexasterophoran sponges. Preserved polyps 3.0���4.0 mm in height, 2.8���4.0 mm in diameter. Azooxanthellate. Cteniform endodermal marginal musculature. Remarks: Churabana and other already described sponge-associated zoantharian genera can be easily distinguished from each other by their host sponges (Hexactinellida sponges vs. Demospongiae sponge) and depths; the former can be found at> 140 m, while the latter are found in shallow coral reefs. Although Churabana and several species within Isozoanthus and Epizoanthus are associated with Hexactinellida sponges, these three genera can be distinguished from each other by their hosts: the latter two genera are associated with species within the subclass Amphidiscophora, while species of Churabana are associated with sponge species within the subclass Hexasterophora. Churabana has a unique deletion of 15 bp (from position 168 to 182 in our alignment) in its 16S-rDNA region. Etymology: The generic name is derived from the Ryukyuan language words chura, beautiful, and bana, flower, referring to the appearance of this species. Gender feminine. The Japanese name is 'Chura-tama-sunaginchaku'., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on page 333, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592
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- 2021
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13. Epizoanthus stellaris Hertwig 1888
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Epizoanthus ,Epizoanthidae ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Epizoanthus stellaris ,Taxonomy - Abstract
EPIZOANTHUS STELLARIS HERTWIG, 1888 (FIG. 3D) Material examined: QM G337585. Hunter CMR, New South Wales, Australia, 32��28 ��� 44.4 ��� S ���32��30 ��� 25.2 ��� S, 152��59 ��� 27.6 ��� E ���52��59 ��� 38.4 ��� E, depth 1006���1036 m, beam trawl, coll. M. Ekins on RV Investigator, Cruise IN2017_V03, 3 June 2017, fixed in 99.5% EtOH. Description: External morphology. Circa 40 nearly saucer-shaped polyps connected by strongly developed dark-brownish coenenchyme on stalks of hexactinellid sponges (Hyalonema sp.) in preserved specimen. Colony covered the upper part of the stalks, but not around the spiculous anchor. Contracted preserved polyps only rise a little from the coenenchyme and flat, 0.4���1.1 mm in height, 3.0��� 6.9 mm in diameter. Capitulary ridges present and well pronounced when contracted, approximately 14���18 in number. Ectoderm and mesoglea of polyps and coenenchyme heavily encrusted with numerous sand and silica particles. Internal morphology. Zooxanthellae absent. Number of mesenteries 28���36, in macrocnemic arrangement. Mesogleal thickness c. 0.1���0.3 mm. Numerous and various size of pigment cells in the ectoderm and mesoglea. Mesoglea thicker than ectoderm and endoderm in column, actinopharynx and mesenteries. Reticulate mesogleal musculature short and poorly developed. Siphonoglyph distinct and V-shaped. Mesenterial filaments present. Habitat and distribution: Tasman Sea at depths of 1006���1036 m in this study. The type locality of this species is off Samboangan [Zamboanga City], Philippines at a depth of 150 m (82 fathoms). This species has been recorded from the Indian Ocean (Reimer & Sinniger, 2021), New Zealand (NIWA, 2018), the East Pacific Ocean (Beaulieu, 2001; Reimer & Sinniger, 2021) and the Caribbean Sea (Due��as & Puentes, 2018). Associated host: Hyalonema sp. Remarks: Epizoanthus stellaris can be distinguished from other Epizoanthus species found on stalks of hexactinellid sponges: the strongly lamellated polyps of E. stellaris are not observed in E. fatuus, E. armatus or E. longiceps (Lwowsky, 1913) (2.0���10.0 mm in height: Lwowsky, 1913; Carlgren, 1923). Lwowsky (1913) synonymized E. stellaris as E. fatuus on account of extreme growth forms of E. fatuus due to the high amounts of morphological variability that are commonly found within zoantharian species. However, the results of our molecular phylogenetic analyses support that E. stellaris and E. fatuus are distinct species. Beaulieu (2001) observed E. stellaris frequently in the East Pacific Ocean, although it should be noted that several species may be contained in E. stellaris, as observed by Beaulieu (2001), based on the results of the present study., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on page 331, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Hertwig R. 1888. Report on the Actiniaria dredged by H. M. S, ' Challenger' during years 1873 - 1876. Supplement. In: Thomson CW, Murray J, eds. Report on the scientific results of the voyage of H. M. S. Challenger during the years 1873 - 76. Zoology 26: 39 - 41.","Reimer J, Sinniger F. 2021. World List of Zoantharia. Zoantharia. Available at: World Register of Marine Species: http: // marinespecies. org / aphia. php? p = taxdetails & id = 607338 (accessed on 2020 - 10 - 01) ..","NIWA. 2018. NIWA Invertebrate collection, v. 1.1. The National Institute of Water and Atmospheric Research (NIWA). Dataset / Occurrence. https: // nzobisipt. niwa. co. nz / resource? r = obisspecify & v = 1.1 (accessed on 2020 - 09 - 15).","Beaulieu SE. 2001. Life on glass houses: sponge stalk communities in the deep sea. Marine Biology 138: 803 - 817.","Duenas LF, Puentes V. 2018. Aportes al conocimiento de la biodiversidad de aguas profundas del mar Caribe colombiano. Anadarko Colombia Company. Bogota, Colombia. Occurrence dataset https: // doi. org / 10.15472 / kr 6 lqa accessed via GBIF. org (accessed on 2020 - 10 - 01).","Lwowsky FF. 1913. Revision der gattung Sidisia (Epizoanthus auct.), ein beitrag zur kenntnis der zoanthiden. Zoologische Jahrbucher (Systematik) 34: 557 - 613.","Carlgren O. 1923. Ceriantharia und zoantharia der deutschen tiefsee-expedition. Zoantharia. Wissenschaftliche Ergebnisse der Deutschen Tiefsee-Expedition auf dem Dampfer ' Valdivia' 1898 - 1899 19: 252 - 337."]}
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- 2021
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14. Vitrumanthus Kise & Montenegro & Santos & Hoeksema & Ekins & Ise & Higashiji & Fernandez-Silva & Reimer 2022, GEN. NOV
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Animalia ,Vitrumanthus ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
GENUS VITRUMANTHUS GEN. NOV. (FIGS 6–8) Type species: Vitrumanthus schrieri sp. nov. by original designation. Zoobank registration: urn:lsid:zoobank.org:act: 00F773E4-4535-49F4-8CDA-30F569190BEF. Diagnosis: Parazoanthidae with obligate symbiotic r e l a t i o n s h i p w i t h m a s s i v e h e x a s t e r o p h o r a n a n d D e m o s p o n g i a e s p o n g e s. P r e s e r v e d p o l y p s 0.3–3.1 mm in length, 0.8–3.4 mm in diameter. Azooxanthellate. Cyclically transitional marginal musculature. Remarks: Vitrumanthus is distinguished from genus Churabana by its marginal musculature. In Vitrumanthus, cyclically transitional marginal musculature with several mesogleal lacunae was observed, while in Churabana cteniform endodermal marginal musculature with comb-like mesogleal pleats was seen. Molecular phylogenetic analyses clearly support the distinctiveness between Churabana and Vitrumanthus. In the 16S-rDNA region, Vitrumanthus has a unique deletion of 15 bp (positions 136–150 in our alignment). Etymology: The generic name is derived from the Latin word vitruma, glass, and Greek word anthos, flower, referring to the appearance of this genus. Gender masculine. The Japanese name is 'Ruri-sunaginchaku'.
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- 2021
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15. Epizoanthus fatuus
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Epizoanthus ,Epizoanthidae ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Epizoanthus fatuus ,Taxonomy - Abstract
EPIZOANTHUS FATUUS (SCHULTZE, 1860) (FIG. 3A, B) Synonymy: Palythoa fatua Schultze, 1860: 36, taf. 2, figs 1���2; Palythoa fatua ��� Andres, 1884: 311; Sidisia fatua ��� Lwowsky, 1913: 589���596, taf. 19, figs 5���8; Sidisia fatua var. alba ��� Lwowsky, 1913: 597. Material examined: MISE-HK33-2 (NSMT-Co 1757), off Amakusa, Kumamoto, Japan, 32��24 ��� 44.8 ��� N 129��28 ��� 01.3 ��� E (position approximate, exact location unknown), 1000 m depth, beat trawl, coll. D. Uyeno on the training vessel Nagasaki-maru, 2011, fixed in 99.5% ethanol. MISE-HK132 (NSMT-Co 1758), Sagami Bay, Kanagawa, Japan, 35��08 ��� 27.5 ��� N ���35��0 8 ��� 33.5 ��� N, 139��32 ��� 12.2 ��� E ���139��32 ��� 44.3 ��� E, 133���274 m depth, dredging, coll. H. Kotsuka on vessel Rinkaimaru, 12 Feb 2015, fixed in 99.5% ethanol. Description: External morphology. Ten to 50 cylindrical polyps connected by strongly developed dark brown and light beige coenenchyme on stalks of hexactinellid sponges (Hyalonema sp.) in preserved specimens. Column of preserved polyps dark brown and light beige in coloration. Colonies covered upper part of stalks, but not around the spiculous anchor. Contracted preserved polyps 0.8���2.9 mm in height, 1.9���3.6 mm in diameter. Capitulum swollen, and diameter of capitulum larger than scapus when contracted. Capitulary ridges present and strongly pronounced when contracted, 14 in number. The number of tentacles of each polyp in this study 28, and tentacles arranged in two rows. Ectoderm and mesoglea of polyps and coenenchyme heavily encrusted with numerous sand and silica particles. Internal morphology: Zooxanthellae absent. Number of mesenteries 28, in macrocnemic arrangement. Mesogleal thickness 0.1���0.3 mm and gradually wider in direction from capitulum towards scapus. Mesoglea either as thick as or thinner than ectoderm. Reticulate mesogleal musculature. Siphonoglyph distinct and V-shaped. Mesenterial filaments present. Habitat and distribution: Indo-Pacific Ocean: near Indonesia (Carlgren, 1923), East China Sea (Pei 1998), the Bay of Bengal, India and Japan (Lwowsky, 1913). Associated host. Hyalonema spp. Remarks: This species has been reported in several studies, which indicate the presence of intraspecific variation (Andres, 1884; Lwowsky, 1913, Carlgren, 1923). In fact, we observed several morphological differences, such as coloration and polyp dimensions, between the two examined specimens (NSMT-Co 1757 and NSMT-Co 1758). Also, some genetic variation of E. fatuus was observed in ITS-rDNA sequences (8 bp), and thus the possibility remains that E. fatuus contains cryptic species, as ITS-rDNA has been demonstrated to be among the most variable genetic regions currently utilized to delineate species within Zoantharia (e.g. Reimer et al., 2007; Montenegro et al., 2015). However, the sequences of the two examined specimens formed a strongly supported monophyletic clade and we therefore identify the examined specimens as a single species in this study. Additional specimens and fine-scale genetic analyses are required to better examine if there is any cryptic diversity within this group., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 327-330, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Schultze MJS. 1860. Die Hyalonemen. Ein Beitrag zur Naturgeschichte der Spongien. Bonn: A. Marcus, i - iii, 1 - 46.","Andres A. 1884. Le Attinie. Fauna und Flora des Golfes von Neapel 9: 1 - 459.","Lwowsky FF. 1913. Revision der gattung Sidisia (Epizoanthus auct.), ein beitrag zur kenntnis der zoanthiden. Zoologische Jahrbucher (Systematik) 34: 557 - 613.","Carlgren O. 1923. Ceriantharia und zoantharia der deutschen tiefsee-expedition. Zoantharia. Wissenschaftliche Ergebnisse der Deutschen Tiefsee-Expedition auf dem Dampfer ' Valdivia' 1898 - 1899 19: 252 - 337.","Pei Z. 1998. Fauna Sinica. Coelenterata: Actiniaria, Ceriantharia, Zoanthidea. Beijing: Science Press, 200 - 201.","Reimer JD, Takishita K, Ono S, Maruyama T. 2007. Diversity and evolution in the zoanthid genus Palythoa (Cnidaria: Hexacorallia) based on nuclear ITS-rDNA. Coral Reefs 26: 399 - 410.","Montenegro J, Sinniger F, Reimer JD. 2015. Unexpected diversity and new species in the sponge-Parazoanthidae association in southern Japan. Molecular Phylogenetics and Evolution 89: 73 - 90."]}
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16. Vitrumanthus oligomyarius
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Vitrumanthus oligomyarius ,Animalia ,Vitrumanthus ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
VITRUMANTHUS OLIGOMYARIUS (WASSILIEFF, 1908) COMB. NOV. (FIG. 8A���G) Basionym: Gemmaria oligomyaria Wassilieff, 1908: 47, fig. 29; taf. I, fig. 29. Material examined: CMNH ZG-4785, off Katsuura, Chiba, Japan, 34��50���N ���35��00���N, 140��20���W ���140��30���W, 390, vertical long line fishing, coll. A. Tamura on vessel Kiyo-maru, 19 Jan 2006, divided into two pieces, one portion fixed in 5���10% saltwater formalin and other in 99.5% ethanol. Description: External morphology. Circa> 300 cylindrical polyps. Solitary polyps arise from Tretochone duplicata (Topsent, 1928) in preserved specimen. Preserved polyps dark-yellow in coloration and trapezoid when opened. Polyps located all over the three-dimensional structured hexactinellid sponge body. Surface of column smooth, and ectoderm continuous. Ectoderm of polyps partially encrusted with small sized sand and silica particles (c., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on page 341, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Wassilieff A. 1908. Japanische actinien, in Doflein. Abhandlungen der Mathematisch-Physikalischen Klasse der Koniglich Bayerischen Akademie der Wissenschaften 1: 1 - 49.","Topsent E. 1928. Sur deux Euretides du Japon. (Note preliminaire). Bulletin de l'Institut oceanographique de Monaco 515: 1 - 4.","Haddon AC, Shackleton AM. 1891 b. Actiniae: I. Zoantheae. In: Reports on the zoological collections made in the Torres Straits by Professor A. C. Haddon, 1888 - 1889. Scientific Transactions of the Royal Dublin Society 4: 673 - 701, pls 61 - 64.","Sinniger F, Reimer JD, Pawlowski J. 2010. The Parazoanthidae (Hexacorallia: Zoantharia) DNA taxonomy: description of two new genera. Marine Biodiversity 40: 57 - 70.","Reimer J, Sinniger F. 2021. World List of Zoantharia. Zoantharia. Available at: World Register of Marine Species: http: // marinespecies. org / aphia. php? p = taxdetails & id = 607338 (accessed on 2020 - 10 - 01) .."]}
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17. Epizoanthus fatuus Gray 1867
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Epizoanthus ,Epizoanthidae ,Animalia ,Epizoanthus aff. fatuus (schultze, 1860) ,Biodiversity ,Zoantharia ,Anthozoa ,Epizoanthus fatuus ,Taxonomy - Abstract
EPIZOANTHUS AFF. FATUUS (SCHULTZE, 1860) (FIG. 3C) Material examined: QM G337590. Hunter CMR, Australia, New South Wales, 32��34 ��� 30.0 ��� S ���32��37 ��� 53.8 ��� S, 153��08 ��� 31.2 ��� E ���153��09 ��� 42.1 ��� E, depth 1006���1036 m, beam trawl, coll. M. Ekins on RV Investigator, Cruise IN2017_V03, 3 June 2017, fixed in 99.5% EtOH. Description: External morphology. Circa 40 cylindrical polyps connected by strongly developed light beige coenenchyme on stalks of hexactinellid sponges (Hyalonema sp.) in preserved specimen. Colony covered upper part of the stalks, but not around the spiculous anchor. Contracted preserved polyps 1.0���3.0 mm in height, 1.5���3.5 mm in diameter. Remarks: The capitulums of this specimen (QM G337590) were not swollen, while capitulums of the examined specimens of Epizoanthus fatuus (NSMT-Co 1757, NSMT-Co 1758) were swollen when contracted. On the other hand, numbers of tentacles and mesenteries were the same between QM G337590 and the examined specimens of E. fatuus. Therefore, we here preliminarily identify the examined specimen as Epizoanthus aff. fatuus., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 330-331, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Schultze MJS. 1860. Die Hyalonemen. Ein Beitrag zur Naturgeschichte der Spongien. Bonn: A. Marcus, i - iii, 1 - 46."]}
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18. Epizoanthus armatus Gray 1867
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Epizoanthus armatus ,Cnidaria ,Epizoanthus ,Epizoanthus aff. armatus carlgren, 1923 ,Churabana ,Epizoanthidae ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
EPIZOANTHUS AFF. ARMATUS CARLGREN, 1923 (FIG. 3E) Material examined: MISE-HPD1323 (NSMT-Co 1759), Kuroshima Island, Kagoshima, Japan, 24��13 ��� 36.1 ��� N, 124��06 ��� 18.0 ���E, depth 468 m, ROV, coll. J.D. Reimer on RV Natsushima, 19 Sep 2011, fixed in 90% ethanol. Description: External morphology. Circa 80 cylindrical polyps connected by strongly developed light-brownish coenenchyme on stalks of hexactinellid sponges (Hyalonema sp.) in preserved specimen. Colony covered the upper part of the stalks, but not around the spiculous anchor. Contracted preserved polyps well developed and 0.5���4.9 mm in height, 2.5���7.8 mm in diameter.Capitulary ridges present but weakly pronounced when contracted, c. 14���16 in number. The numbers of tentacles of each polyp c. 28���32 and tentacles arranged in two rows. Internal morphology. Zooxanthellae absent. Number of mesenteries 28���32, in macrocnemic arrangement. Reticulate mesogleal musculature. Habitat and distribution: Off Kuroshima, Okinawa, in the Ryukyu Archipelago, Japan at a depth of 468 m. Epizoanthus armatus has previously been reported from off Somalia in the Indian Ocean (Carlgren, 1923). Associated host: Hyalonema sp. Remarks: Polyp dimensions of the examined specimen are larger than those of E. fatuus and E. stellaris, and this specimen resembles E. armatus as described by Carlgren (1923). The morphological characters and dimensions observed in the examined specimen agree well with the original description by Carlgren (1923). Epizoanthus armatus was originally described from East Africa (Carlgren, 1923). Kise et al. (2018) reported the existence of E. planus Carlgren, 1923 in Japanese waters, and this species was also originally described from East Africa.Therefore, it is possible that E. armatus may also be distributed in Japanese waters. However, the collected depths of the examined specimen in this study and the specimens Carlgren (1923) examined are different (468 m vs. 741���1362 m deep). We also could not observe internal morphology of the examined specimen due to its poor preserved condition. Therefore, we here preliminarily identified the examined specimen as Epizoanthus aff. armatus. Examination of additional specimens combined with molecular analyses should help confirm the identity of this specimen. FAMILY PARAZOANTHIDAE DELAGE & HEROUARD, 1901 GENUS CHURABANA GEN. NOV. (FIG. 4A���H) Z o o b a n k r e g i s t r a t i o n: u r n: l s i d: z o o b a n k. org:act: EACFCC05-EA56-4F04-94A2-FB716F22004C. Type species: Churabana kuroshioae sp. nov. by original designation. Diagnosis: Parazoanthidae with obligate symbiotic relationship with massive hexasterophoran sponges. Preserved polyps 3.0���4.0 mm in height, 2.8���4.0 mm in diameter. Azooxanthellate. Cteniform endodermal marginal musculature. Remarks: Churabana and other already described sponge-associated zoantharian genera can be easily distinguished from each other by their host sponges (Hexactinellida sponges vs. Demospongiae sponge) and depths; the former can be found at> 140 m, while the latter are found in shallow coral reefs. Although Churabana and several species within Isozoanthus and Epizoanthus are associated with Hexactinellida sponges, these three genera can be distinguished from each other by their hosts: the latter two genera are associated with species within the subclass Amphidiscophora, while species of Churabana are associated with sponge species within the subclass Hexasterophora. Churabana has a unique deletion of 15 bp (from position 168 to 182 in our alignment) in its 16S-rDNA region. Etymology: The generic name is derived from the Ryukyuan language words chura, beautiful, and bana, flower, referring to the appearance of this species. Gender feminine. The Japanese name is 'Chura-tama-sunaginchaku'. GENUS CHURABANA GEN. NOV. (FIG. 4A���H) Z o o b a n k r e g i s t r a t i o n: u r n: l s i d: z o o b a n k. org:act: EACFCC05-EA56-4F04-94A2-FB716F22004C. Type species: Churabana kuroshioae sp. nov. by original designation. Diagnosis: Parazoanthidae with obligate symbiotic relationship with massive hexasterophoran sponges. Preserved polyps 3.0���4.0 mm in height, 2.8���4.0 mm in diameter. Azooxanthellate. Cteniform endodermal marginal musculature. Remarks: Churabana and other already described sponge-associated zoantharian genera can be easily distinguished from each other by their host sponges (Hexactinellida sponges vs. Demospongiae sponge) and depths; the former can be found at> 140 m, while the latter are found in shallow coral reefs. Although Churabana and several species within Isozoanthus and Epizoanthus are associated with Hexactinellida sponges, these three genera can be distinguished from each other by their hosts: the latter two genera are associated with species within the subclass Amphidiscophora, while species of Churabana are associated with sponge species within the subclass Hexasterophora. Churabana has a unique deletion of 15 bp (from position 168 to 182 in our alignment) in its 16S-rDNA region. Etymology: The generic name is derived from the Ryukyuan language words chura, beautiful, and bana, flower, referring to the appearance of this species. Gender feminine. The Japanese name is 'Chura-tama-sunaginchaku'., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 332-333, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Carlgren O. 1923. Ceriantharia und zoantharia der deutschen tiefsee-expedition. Zoantharia. Wissenschaftliche Ergebnisse der Deutschen Tiefsee-Expedition auf dem Dampfer ' Valdivia' 1898 - 1899 19: 252 - 337.","Kise H, Dewa N, Reimer JD. 2018. First record of sea urchinassociated Epizoanthus planus from Japanese waters and its morphology and molecular phylogeny. Plankton and Benthos Research 13: 136 - 141.","Delage Y, Herouard E. 1901. Zoanthides - Zoanthidea. In: Traitede Zoologie concrete. Tome II - 2 me Partie. Les Coelenteres. Paris: C. Reinwald, 654 - 667. Available at: https: // gallica. bnf. fr / ark: / 12148 / bpt 6 k 5597996 v. texteImage"]}
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19. Epizoanthus Gray 1867
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Epizoanthus ,Epizoanthidae ,Animalia ,Biodiversity ,Zoantharia ,Anthozoa ,Taxonomy - Abstract
GENUS EPIZOANTHUS GRAY, 1867 Type species: Dysidea papillosa Johnston, 1842, by monotypy (see also Opinion 1689 in ICZN, 1992). Diagnosis: Macrocnemic zoantharians with simple mesogleal musculature, readily distinguishable from Palaeozoanthus by the presence of non-fertile micromesenteries (Sinniger & H��ussermann 2009)., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on page 327, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Gray JE. 1867. Notes on Zoanthinae, with descriptions of some new genera. Proceedings of the Zoological Society of London 15: 233 - 240.","Johnston G. 1842. A history of British sponges and lithophytes. Edinburgh, London & Dublin: Publisher","ICZN 1992. Opinion 1689. Epizoanthus Gray, 1867 (Cnidaria, Anthozoa): conserved. Bulletin of Zoological Nomenclature 49: 236 - 237.","Sinniger F, Haussermann V. 2009. Zoanthids (Cnidaria: Hexacorallia: Zoantharia) from shallow waters of the southern Chilean fjord region, with descriptions of a new genus and two new species. Organisms Diversity & Evolution 9: 23 - 36."]}
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20. Vitrumanthus schrieri Kise & Montenegro & Santos & Hoeksema & Ekins & Ise & Higashiji & Fernandez-Silva & Reimer 2022, SP. NOV
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D.
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Cnidaria ,Vitrumanthus schrieri ,Animalia ,Vitrumanthus ,Biodiversity ,Zoantharia ,Anthozoa ,Parazoanthidae ,Taxonomy - Abstract
VITRUMANTHUS SCHRIERI SP. NOV. (FIG. 6A���F) Synonymy: Parazoanthidae sp. ��� Montenegro et al., 2020: 7���8, fig. 2; ���zoanthid symbionts���, ���zoanthids��� ��� Reiswig & Dohrmann, 2014: 241���242, fig. 4A, B; ���white zoanthids��� ��� Van Soest et al., 2014: 438. Z o o b a n k r e g i s t r a t i o n: u r n: l s i d: z o o b a n k. org:act: D326729E-6617-4C5F-8F43-31C5C7133EF4. Material examined: Holotype: RMNH.COEL.42429, SubStation, Cura��ao, 12��14 ��� 01 ��� N, 68��53 ��� 32 ��� W, depth range 161���243 m, manned submarine Curasub, coll. B. W. Hoeksema, 31 Mar 2014, fixed in 99.5% ethanol. Paratype: RMNH.COEL.42430, SubStation, Cura��ao, 12��05 ��� 04 ��� N, 68��53 ��� 54 ��� W, c. 200 m deep, manned submarine Curasub, coll. B. W. Hoeksema, 21 Apr 2014, fixed in 99.5% ethanol. Other material examined: RMNH.COEL.42620, Cargill Pier, Bonaire, Caribbean Netherlands, 12��04 ��� 47.9 ��� N, 68��17 ��� 37.7 ��� W, depth 223 m, manned submarine Curasub based on RV Chapman, coll. L. Becking and E. Meesters, 1 Jun 2013, fixed in 99.5% ethanol. RMNH.COEL.42621, Cargill Pier, Bonaire, Caribbean Netherlands, 12��04 ��� 47.9 ��� N, 68��17 ��� 37.7 ��� W, depth 248 m, manned submarine Curasub based on RV Chapman, coll. L. Becking and E. Meesters, 1 Jun 2013, fixed in 99.5% ethanol. RMNH.COEL.42622, Kralendijk Pier, Bonaire, Caribbean Netherlands, 12��08 ��� 48.9 ��� N, 68��16 ��� 55.6 ��� W, depth 140 m, manned submarine Curasub based on RV Chapman, coll. L. Becking and E. Meesters, 30 May 2013, fixed in 99.5% ethanol. Etymology: The species is named for Adriaan ���Dutch��� Schrier, owner of the manned submersible Curasub and RV Chapman, operated from Substation Cura��ao, for his generosity in allowing BWH to sample specimens. The Japanese name is 'Amime-ruri-sunaginchaku'. Description: External morphology. Circa 50 cylindrical polyps in preserved specimen. Solitary or colonial polyps rise irregularly from the hexactinellid sponge Verrucocoeloidea liberatoriii Reswig & Dohrmann, 2014. Living polyps white and tentacle transparent in coloration. Preserved polyps dark beige. Surface of column rough and ectoderm continuous. Ectoderm and mesoglea of polyps encrusted with numerous and various sizes of sand and silica particles. The living expanded oral disks c. up to 8.0 mm in diameter, expanded polyps c. up to 10 mm in height, 1.0���5.0 mm in diameter. Preserved contracted preserved polyps 0.3���2.1 mm in height, 0.8���2.8 mm in diameter. Capitulary ridges indiscernible. Tentacles 20���24 in number. Internal morphology. Zooxanthellae absent. Cyclically transitional marginal musculature. Encircling sinus present and basal canals of mesenteries absent. Mesenteries thin. Mesoglea thickness c. 0.6 mm. Mesoglea thicker than ectoderm and endoderm. Siphonoglyph distinct and V-shaped. Mesenterial filaments present. Cnidae. Basitrichs and microbasic b-mastigophores, microbasic p-mastigophores, holotrichs and spirocysts (Fig. 5B; Table 2). Distribution and habitats: Caribbean Netherlands: known from Cura��ao and Bonaire at depths of 140��� 248 m. Associated hosts: Verrucocoeloidea liberatorii Reswig & Dohrmann, 2014, Parahigginsia strongylifera Van Soest, Meesters & Becking, 2014 and Cyrtaulon sigsbeei (Schmidt, 1880). Remarks: In terms of host hexactinellid sponges, Vitrumanthus schrieri can be distinguished from V. vanderlandi and V. oligomyarius (Wassilieff, 1908) because only V. schrieri is associated with Verrucocoeloidea sponges. Vitrumanthus schrieri is not only associated with hexactinellid sponges, but also with Demospongiae species in the genus Parahigginsia (Van Soest et al., 2014). On the other hand, V. vanderlandi and V. oligomyarius are associated with Tretochone duplicata (Topsent, 1928). In addition, the column of V. schrieri is rough, due to heavy encrustation, while columns of V. vanderlandi and V. oligomyarius are smooth with almost no encrustations. Vitrumanthus sp. (NSMT-Co 1755) and V. vanderlandi are associated with Cyrtaulon species. Reiswig & Dohrmann (2014) reported zoantharians were found on Verrucocoeloidea liberatorii, and we judge that these are likely V. schrieri based on external morphology and the host hexactinellid sponge species., Published as part of Kise, Hiroki, Montenegro, Javier, Santos, Maria E. A., Hoeksema, Bert W., Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria & Reimer, James D., 2022, Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species, pp. 323-347 in Zoological Journal of the Linnean Society 194 on pages 337-339, DOI: 10.1093/zoolinnean/zlab068, http://zenodo.org/record/5799592, {"references":["Montenegro J, Hoeksema BW, Santos MEA, Kise H, Reimer JD. 2020. Zoantharia (Cnidaria: Hexacorallia) of the Dutch Caribbean with historical distribution records from the Atlantic and one new species of Parazoanthus. Diversity 12 (5): 190.","Reiswig HM, Dohrmann M. 2014. Three new species of glass sponges (Porifera: Hexactinellida) from the West Indies, and molecular phylogenetics of Euretidae and Auloplacidae (Sceptrulophora). Zoological Journal of the Linnean Society 171: 233 - 253.","Van Soest RW, Meesters EH, Becking LE. 2014. Deepwater sponges (Porifera) from Bonaire and Klein Curacao, Southern Caribbean. Zootaxa 3878: 401 - 443.","Schmidt O. 1880. Die Spongien des meerbusen von Mexico (Und des caraibischen Meeres). Heft II. Abtheilung II. Hexactinelliden. Abtheilung III. Tetractinelliden. Monactinelliden und Anhang. Nachtrage zu Abtheilung I (Lithistiden). In: Reports on the dredging under the supervision of Alexander Agassiz, in the Gulf of Mexico, by the USCSS ' Blake'. Jena: Gustav Fischer, 33 - 90.","Wassilieff A. 1908. Japanische actinien, in Doflein. Abhandlungen der Mathematisch-Physikalischen Klasse der Koniglich Bayerischen Akademie der Wissenschaften 1: 1 - 49.","Topsent E. 1928. Sur deux Euretides du Japon. (Note preliminaire). Bulletin de l'Institut oceanographique de Monaco 515: 1 - 4."]}
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21. The projected timing of climate departure from recent variability
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Mora, Camilo, Frazier, Abby G., Longman, Ryan J., Dacks, Rachel S., Walton, Maya M., Tong, Eric J., Sanchez, Joseph J., Kaiser, Lauren R., Stender, Yuko O., Anderson, James M., Ambrosino, Christine M., Fernandez-Silva, Iria, Giuseffi, Louise M., and Giambelluca, Thomas W.
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Greenhouse gases -- Environmental aspects -- Analysis ,Climatic changes -- Analysis ,Environmental issues ,Science and technology ,Zoology and wildlife conservation - Abstract
Ecological and societal disruptions by modern climate change are critically determined by the time frame over which climates shift beyond historical analogues. Here we present a new index of the year when the projected mean climate of a given location moves to a state continuously outside the bounds of historical variability under alternative greenhouse gas emissions scenarios. Using 1860 to 2005 as the historical period, this index has a global mean of 2069 (± 18 years s.d.) for near-surface air temperature under an emissions stabilization scenario and 2047 (± 14 years s.d.) under a 'business-as-usual' scenario. Unprecedented climates will occur earliest in the tropics and among low-income countries, highlighting the vulnerability of global biodiversity and the limited governmental capacity to respond to the impacts of climate change. Our findings shed light on the urgency of mitigating greenhouse gas emissions if climates potentially harmful to biodiversity and society are to be prevented., Climate is a primary driver of biological processes, operating from individuals to ecosystems, and affects several aspects of human life. Therefore, climates without modern precedents could cause large and potentially [...]
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- 2013
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22. Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species
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Kise, Hiroki, primary, Montenegro, Javier, additional, Santos, Maria E A, additional, Hoeksema, Bert W, additional, Ekins, Merrick, additional, Ise, Yuji, additional, Higashiji, Takuo, additional, Fernandez-Silva, Iria, additional, and Reimer, James D, additional
- Published
- 2021
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23. Higher Genetic Diversity of the Common Sea Cucumber Holothuria (Halodeima) atra in Marine Protected Areas of the Central and Southern Ryukyu Islands
- Author
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Hamamoto, Kohei, primary, Soliman, Taha, additional, Poliseno, Angelo, additional, Fernandez-Silva, Iria, additional, and Reimer, James Davis, additional
- Published
- 2021
- Full Text
- View/download PDF
24. Sympatric Speciation in the Post “Modern Synthesis” Era of Evolutionary Biology
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Bird, Christopher E., Fernandez-Silva, Iria, Skillings, Derek J., and Toonen, Robert J.
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- 2012
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25. Fostering international collaboration in marine biodiversity sciences in the Asia-Pacific region
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Costello, Mark John, Reimer, James, Szabo, Zoltan, Fernandez-Silva, Iria, Adzis, Kee Alfian Abdul, Worheide, Gert, Beardall, John, Lai, Joelle C.Y., Lee, Wong Ching, Orlov, Alexei, and Williams, Gray A.
- Subjects
Marine sciences -- Conferences, meetings and seminars ,International relations -- Environmental aspects ,Earth sciences ,Science and technology - Abstract
At the 22nd Pacific Science Congress in Kuala Lumpur, Malaysia a workshop was held on 17th June 2011 where an international group of delegates discussed the potential for fostering international [...]
- Published
- 2012
26. Shaping melons: agronomic and genetic characterization of QTLs that modify melon fruit morphology
- Author
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Fernandez-Silva, Iria, Moreno, Eduard, Essafi, Ali, Fergany, Mohamed, Garcia-Mas, Jordi, Martín-Hernandez, Ana Montserrat, Álvarez, Jose María, and Monforte, Antonio J.
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- 2010
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27. Mora et al. reply
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Mora, Camilo, Frazier, Abby G., Longman, Ryan J., Dacks, Rachel S., Walton, Maya M., Tong, Eric J., Sanchez, Joseph J., Kaiser, Lauren R., Stender, Yuko O., Anderson, James M., Ambrosino, Christine M., Fernandez-Silva, Iria, Giuseffi, Louise M., and Giambelluca, Thomas W.
- Published
- 2014
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28. Exploring the trends of adaptation and evolution of sclerites with regards to habitat depth in sea pens.
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Yuka Kushida, Yukimitsu Imahara, Hin Boo Wee, Fernandez-Silva, Iria, Fromont, Jane, Gomez, Oliver, Wilson, Nerida, Taeko Kimura, Shinji Tsuchida, Yoshihiro Fujiwara, Takuo Higashiji, Hiroaki Nakano, Hisanori Kohtsuka, Akira Iguchi, and Reimer, James Davis
- Subjects
HABITATS ,CONVERGENT evolution ,OCTOCORALLIA ,SPECIES diversity ,WATER depth ,WATER temperature - Abstract
Octocorals possess sclerites, small elements comprised of calcium carbonate (CaCO3) that are important diagnostic characters in octocoral taxonomy. Among octocorals, sea pens comprise a unique order (Pennatulacea) that live in a wide range of depths. Habitat depth is considered to be important in the diversification of octocoral species, but a lack of information on sea pens has limited studies on their adaptation and evolution across depth. Here, we aimed to reveal trends of adaptation and evolution of sclerite shapes in sea pens with regards to habitat depth via phylogenetic analyses and ancestral reconstruction analyses. Colony form of sea pens is suggested to have undergone convergent evolution and the loss of axis has occurred independently across the evolution of sea pens. Divergences of sea pen taxa and of sclerite forms are suggested to depend on habitat depths. In addition, their sclerite forms may be related to evolutionary history of the sclerite and the surrounding chemical environment as well as water temperature. Three-flanged sclerites may possess the tolerance towards the environment of the deep sea, while plate sclerites are suggested to be adapted towards shallower waters, and have evolved independently multiple times. The common ancestor form of sea pens was predicted to be deep-sea and similar to family Pseudumbellulidae in form, possessing sclerites intermediate in form to those of alcyonaceans and modern sea pens such as spindles, rods with spines, and three-flanged sclerites with serrated edges sclerites, as well as having an axis and bilateral traits. [ABSTRACT FROM AUTHOR]
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- 2022
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29. Etelis boweni sp. nov., a new cryptic deepwater eteline snapper from the Indo‐Pacific (Perciformes: Lutjanidae)
- Author
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Andrews, Kimberly R., primary, Fernandez‐Silva, Iria, additional, Randall, John E., additional, and Ho, Hsuan‐Ching, additional
- Published
- 2021
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30. Optimizing Selection of Microsatellite Loci from 454 Pyrosequencing via Post-sequencing Bioinformatic Analyses
- Author
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Fernandez-Silva, Iria, primary and Toonen, Robert J., additional
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- 2013
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31. Evolution and phylogeny of glass-sponge-associated zoantharians, with a description of two new genera and three new species.
- Author
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Kise, Hiroki, Montenegro, Javier, Santos, Maria E A, Hoeksema, Bert W, Ekins, Merrick, Ise, Yuji, Higashiji, Takuo, Fernandez-Silva, Iria, and Reimer, James D
- Subjects
PHYLOGENY ,MARINE ecology ,SPECIES ,SYMBIOSIS - Abstract
Hexactinellid sponges are important members of deep-sea benthic ecosystems because they provide available hard substrate habitats for filter-feeding invertebrates. However, symbioses between hexactinellid sponges and their symbionts are poorly known. Zoantharians associated with hexactinellid sponges have been reported widely from deep-sea marine ecosystems, either on the bodies or stalks of hexactinellid sponges. Despite these records, there has been a lack of research on their diversity and phylogenetic relationships. In this study, 20 specimens associated with amphidiscophoran and hexasterophoran sponges were collected from the waters of Australia and Japan in the Pacific, and from Curaçao in the southern Caribbean, and these were examined in addition to museum specimens. Based on molecular phylogenetic analyses and morphological observations, we formally describe two new genera and three new species of Zoantharia and report several previously described species. The results suggest at least two independent origins for the symbioses between hexactinellid sponges and zoantharians. Our results demonstrate that the diversity of hexactinellid sponge-associated zoantharians is much higher than has been previously thought. The new taxa described in this work further reconfirm that the deep-sea harbours high levels of undescribed zoantharian diversity. [ABSTRACT FROM AUTHOR]
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- 2022
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32. A behavioral and genetic study of multiple paternity in a polygamous marine invertebrate, Octopus oliveri
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Ylitalo, Heather, primary, Oliver, Thomas A., additional, Fernandez-Silva, Iria, additional, Wood, James B., additional, and Toonen, Robert J., additional
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- 2019
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33. Who’s your daddy? A behavioral and genetic study of multiple paternity in a polygamous marine invertebrate, Octopus oliveri
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Ylitalo, Heather, primary, Oliver, Thomas A, additional, Fernandez-Silva, Iria, additional, Wood, James B, additional, and Toonen, Robert J, additional
- Published
- 2018
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34. Molecular Phylogeny Demonstrates the Need for Taxonomic Reconsideration of Species Diversity of the Hydrocoral Genus Millepora (Cnidaria: Hydrozoa) in the Pacific
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Takama, Okuto, primary, Fernandez-Silva, Iria, additional, López, Cataixa, additional, and Reimer, James Davis, additional
- Published
- 2018
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35. Whole-genome assembly of the coral reef Pearlscale Pygmy Angelfish (Centropyge vrolikii)
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Fernandez-Silva, Iria, primary, Henderson, James B., additional, Rocha, Luiz A., additional, and Simison, W. Brian, additional
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- 2018
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36. Revision of the circumtropical glasseye fish Heteropriacanthus cruentatus (Perciformes: Priacanthidae), with resurrection of two species
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FERNANDEZ-SILVA, IRIA, primary and HO, HSUAN-CHING, additional
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- 2017
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37. Coral reef grazer-benthos dynamics complicated by invasive algae in a small marine reserve
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Stamoulis, Kostantinos A., primary, Friedlander, Alan M., additional, Meyer, Carl G., additional, Fernandez-Silva, Iria, additional, and Toonen, Robert J., additional
- Published
- 2017
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38. Extremely low genetic variability within and among locations of the greenfish holothurianStichopus chloronotusBrandt, 1835 in Okinawa, Japan
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Soliman, Taha, primary, Takama, Okuto, additional, Fernandez-Silva, Iria, additional, and Reimer, James D., additional
- Published
- 2016
- Full Text
- View/download PDF
39. Mulloidichthys flavolineatus flavicaudus Fernandez-Silva & Randall (Perciformes, Mullidae), a new subspecies of goatfish from the Red Sea and Arabian Sea
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Fernandez-Silva, Iria, primary, Randall, John E., additional, Golani, Daniel, additional, and Bogorodsky, Sergey V., additional
- Published
- 2016
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40. Global divergence of the human follicle mite Demodex folliculorum:persistent associations between host ancestry and mite lineages
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Palopoli, Michael F., Fergus, Daniel J., Minot, Samuel, Pei, Dorothy T., Simison, W. Brian, Fernandez-Silva, Iria, Thoemmes, Megan S., Dunn, Robert Roberdeau, Trautwein, Michelle, Palopoli, Michael F., Fergus, Daniel J., Minot, Samuel, Pei, Dorothy T., Simison, W. Brian, Fernandez-Silva, Iria, Thoemmes, Megan S., Dunn, Robert Roberdeau, and Trautwein, Michelle
- Abstract
Microscopic mites of the genus Demodex live within the hair follicles of mammals and are ubiquitous symbionts of humans, but little molecular work has been done to understand their genetic diversity or transmission. Here we sampled mite DNA from 70 human hosts of diverse geographic ancestries and analyzed 241 sequences from the mitochondrial genome of the species Demodex folliculorum. Phylogenetic analyses recovered multiple deep lineages including a globally distributed lineage common among hosts of European ancestry and three lineages that primarily include hosts of Asian, African, and Latin American ancestry. To a great extent, the ancestral geography of hosts predicted the lineages of mites found on them; 27% of the total molecular variance segregated according to the regional ancestries of hosts. We found that D. folliculorum populations are stable on an individual over the course of years and that some Asian and African American hosts maintain specific mite lineages over the course of years or generations outside their geographic region of birth or ancestry. D. folliculorum haplotypes were much more likely to be shared within families and between spouses than between unrelated individuals, indicating that transmission requires close contact. Dating analyses indicated that D. folliculorum origins may predate modern humans. Overall, D. folliculorum evolution reflects ancient human population divergences, is consistent with an out-of-Africa dispersal hypothesis, and presents an excellent model system for further understanding the history of human movement.
- Published
- 2015
41. Multilocus evidence for globally distributed cryptic species and distinct populations across ocean gyres in a mesopelagic copepod
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Andrews, Kimberly R., primary, Norton, Emily L., additional, Fernandez-Silva, Iria, additional, Portner, Elan, additional, and Goetze, Erica, additional
- Published
- 2014
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42. ezRAD: a simplified method for genomic genotyping in non-model organisms
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Toonen, Robert J., primary, Puritz, Jonathan B., additional, Forsman, Zac H., additional, Whitney, Jonathan L., additional, Fernandez-Silva, Iria, additional, Andrews, Kimberly R., additional, and Bird, Christopher E., additional
- Published
- 2013
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43. Microsatellites for Next-Generation Ecologists: A Post-Sequencing Bioinformatics Pipeline
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Fernandez-Silva, Iria, primary, Whitney, Jonathan, additional, Wainwright, Benjamin, additional, Andrews, Kimberly R., additional, Ylitalo-Ward, Heather, additional, Bowen, Brian W., additional, Toonen, Robert J., additional, Goetze, Erica, additional, and Karl, Stephen A., additional
- Published
- 2013
- Full Text
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44. Spread of a SARS-CoV-2 variant through Europe in the summer of 2020
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Medicina Preventiva, Hodcroft, Emma B., Zuber, Moira, Nadeau, Sarah, Vaughan, Timothy G., Crawford, Katharine H. D., Althaus, Christian L., Reichmuth, Martina L., Bowen, John E., Walls, Alexandra C., Corti, Davide, Bloom, Jesse D., Veesler, David, Mateo, David, Hernando, Alberto, Comas, Iñaki, González-Candelas, Fernando, Goig, Galo Adrian, Chiner-Oms, Álvaro, Cancino-Muñoz, Irving, López, Mariana Gabriela, Torres-Puente, Manuela, Gomez-Navarro, Inmaculada, Jiménez-Serrano, Santiago, Ruiz-Roldán, Lidia, Bracho, María Alma, García-González, Neris, Martínez-Priego, Llúcia, Galán-Vendrell, Inmaculada, Ruiz-Hueso, Paula, De Marco, Griselda, Ferrús, Maria Loreto, Carbó-Ramírez, Sandra, D’Auria, Giuseppe, Coscollá, Mireia, Ruiz-Rodríguez, Paula, Roig-Sena, Francisco Javier, Sanmartín, Isabel, Garcia-Souto, Daniel, Pequeno-Valtierra, Ana, Tubio, Jose M. C., Rodríguez-Castro, Jorge, Rabella, Nuria, Navarro, Ferrán, Miró, Elisenda, Rodríguez-Iglesias, Manuel, Galán-Sanchez, Fátima, Rodriguez-Pallares, Salud, de Toro, María, Escudero, María Bea, Azcona-Gutiérrez, José Manuel, Alberdi, Miriam Blasco, Mayor, Alfredo, García-Basteiro, Alberto L., Moncunill, Gemma, Dobaño, Carlota, Cisteró, Pau, García-de-Viedma, Darío, Pérez-Lago, Laura, Herranz, Marta, Sicilia, Jon, Catalán-Alonso, Pilar, Muñoz, Patricia, Muñoz-Cuevas, Cristina, Rodríguez-Rodríguez, Guadalupe, Alberola-Enguidanos, Juan, Nogueira, Jose Miguel, Camarena, Juan José, Rezusta, Antonio, Tristancho-Baró, Alexander, Milagro, Ana, Martínez-Cameo, Nieves Felisa, Gracia-Grataloup, Yolanda, Martró, Elisa, Bordoy, Antoni E., Not, Anna, Antuori-Torres, Adrián, Benito, Rafael, Algarate, Sonia, Bueno, Jessica, del Pozo, Jose Luis, Boga, Jose Antonio, Castelló-Abietar, Cristián, Rojo-Alba, Susana, Alvarez-Argüelles, Marta Elena, Melon, Santiago, Aranzamendi-Zaldumbide, Maitane, Vergara-Gómez, Andrea, Fernández-Pinero, Jovita, Martínez, Miguel J., Vila, Jordi, Rubio, Elisa, Peiró-Mestres, Aida, Navero-Castillejos, Jessica, Posada, David, Valverde, Diana, Estévez-Gómez, Nuria, Fernandez-Silva, Iria, de Chiara, Loretta, Gallego-García, Pilar, Varela, Nair, Moreno, Rosario, Tirado, Maria Dolores, Gomez-Pinedo, Ulises, Gozalo-Margüello, Mónica, Eliecer-Cano, Maria, Méndez-Legaza, José Manuel, Rodríguez-Lozano, Jesus, Siller, María, Pablo-Marcos, Daniel, Oliver, Antonio, Reina, Jordi, López-Causapé, Carla, Canut-Blasco, Andrés, Hernáez-Crespo, Silvia, Cordón, Maria Luz A., Lecároz-Agara, María-Concepción, Gómez-González, Carmen, Aguirre-Quiñonero, Amaia, López-Mirones, José Israel, Fernández-Torres, Marina, Almela-Ferrer, Maria Rosario, Gonzalo-Jiménez, Nieves, Ruiz-García, Maria Montserrat, Galiana, Antonio, Sanchez-Almendro, Judith, Cilla, Gustavo, Montes, Milagrosa, Piñeiro, Luis, Sorarrain, Ane, Marimón, José María, Gomez-Ruiz, Maria Dolores, López-Hontangas, José Luis, González Barberá, Eva M., Navarro-Marí, José María, Pedrosa-Corral, Irene, Sanbonmatsu-Gámez, Sara, Pérez-González, Carmen, Chamizo-López, Francisco, Bordes-Benítez, Ana, Navarro, David, Albert, Eliseo, Torres, Ignacio, Gascón, Isabel, Torregrosa-Hetland, Cristina Juana, Pastor-Boix, Eva, Cascales-Ramos, Paloma, Fuster-Escrivá, Begoña, Gimeno-Cardona, Concepción, Ocete, María Dolores, Medina-Gonzalez, Rafael, González-Cantó, Julia, Martínez-Macias, Olalla, Palop-Borrás, Begoña, de Toro, Inmaculada, Mediavilla-Gradolph, Maria Concepción, Pérez-Ruiz, Mercedes, González-Recio, Óscar, Gutiérrez-Rivas, Mónica, Simarro-Córdoba, Encarnación, Lozano-Serra, Julia, Robles-Fonseca, Lorena, de Salazar, Adolfo, Viñuela-González, Laura, Chueca, Natalia, García, Federico, Gómez-Camarasa, Cristina, de la Puente, Raul, Farga-Martí, Maria Amparo, Domínguez-Márquez, Victoria, Costa-Alcalde, José Javier, Trastoy, Rocío, Barbeito-Castiñeiras, Gema, Coira, Amparo, Pérez-del-Molino, María Luisa, Aguilera, Antonio, Planas, Anna M., Soriano, Alex, Fernandez-Cádenas, Israel, Pérez-Tur, Jordi, Marcos, Maria Ángeles, Moreno-Docón, Antonio, Viedma, Esther, Mingorance, Jesús, Galán-Montemayor, Juan Carlos, Parra-Grande, Mónica, Stadler, Tanja, Neher, Richard A., Carvajal Urueña, Ana María, Martín Sánchez, Vicente, Fregeneda Grandes, Juan Miguel, Molina de la Torre, Antonio José, Argüello Rodríguez, Héctor, Fernández Villa, Tania, Medicina Preventiva, Hodcroft, Emma B., Zuber, Moira, Nadeau, Sarah, Vaughan, Timothy G., Crawford, Katharine H. D., Althaus, Christian L., Reichmuth, Martina L., Bowen, John E., Walls, Alexandra C., Corti, Davide, Bloom, Jesse D., Veesler, David, Mateo, David, Hernando, Alberto, Comas, Iñaki, González-Candelas, Fernando, Goig, Galo Adrian, Chiner-Oms, Álvaro, Cancino-Muñoz, Irving, López, Mariana Gabriela, Torres-Puente, Manuela, Gomez-Navarro, Inmaculada, Jiménez-Serrano, Santiago, Ruiz-Roldán, Lidia, Bracho, María Alma, García-González, Neris, Martínez-Priego, Llúcia, Galán-Vendrell, Inmaculada, Ruiz-Hueso, Paula, De Marco, Griselda, Ferrús, Maria Loreto, Carbó-Ramírez, Sandra, D’Auria, Giuseppe, Coscollá, Mireia, Ruiz-Rodríguez, Paula, Roig-Sena, Francisco Javier, Sanmartín, Isabel, Garcia-Souto, Daniel, Pequeno-Valtierra, Ana, Tubio, Jose M. C., Rodríguez-Castro, Jorge, Rabella, Nuria, Navarro, Ferrán, Miró, Elisenda, Rodríguez-Iglesias, Manuel, Galán-Sanchez, Fátima, Rodriguez-Pallares, Salud, de Toro, María, Escudero, María Bea, Azcona-Gutiérrez, José Manuel, Alberdi, Miriam Blasco, Mayor, Alfredo, García-Basteiro, Alberto L., Moncunill, Gemma, Dobaño, Carlota, Cisteró, Pau, García-de-Viedma, Darío, Pérez-Lago, Laura, Herranz, Marta, Sicilia, Jon, Catalán-Alonso, Pilar, Muñoz, Patricia, Muñoz-Cuevas, Cristina, Rodríguez-Rodríguez, Guadalupe, Alberola-Enguidanos, Juan, Nogueira, Jose Miguel, Camarena, Juan José, Rezusta, Antonio, Tristancho-Baró, Alexander, Milagro, Ana, Martínez-Cameo, Nieves Felisa, Gracia-Grataloup, Yolanda, Martró, Elisa, Bordoy, Antoni E., Not, Anna, Antuori-Torres, Adrián, Benito, Rafael, Algarate, Sonia, Bueno, Jessica, del Pozo, Jose Luis, Boga, Jose Antonio, Castelló-Abietar, Cristián, Rojo-Alba, Susana, Alvarez-Argüelles, Marta Elena, Melon, Santiago, Aranzamendi-Zaldumbide, Maitane, Vergara-Gómez, Andrea, Fernández-Pinero, Jovita, Martínez, Miguel J., Vila, Jordi, Rubio, Elisa, Peiró-Mestres, Aida, Navero-Castillejos, Jessica, Posada, David, Valverde, Diana, Estévez-Gómez, Nuria, Fernandez-Silva, Iria, de Chiara, Loretta, Gallego-García, Pilar, Varela, Nair, Moreno, Rosario, Tirado, Maria Dolores, Gomez-Pinedo, Ulises, Gozalo-Margüello, Mónica, Eliecer-Cano, Maria, Méndez-Legaza, José Manuel, Rodríguez-Lozano, Jesus, Siller, María, Pablo-Marcos, Daniel, Oliver, Antonio, Reina, Jordi, López-Causapé, Carla, Canut-Blasco, Andrés, Hernáez-Crespo, Silvia, Cordón, Maria Luz A., Lecároz-Agara, María-Concepción, Gómez-González, Carmen, Aguirre-Quiñonero, Amaia, López-Mirones, José Israel, Fernández-Torres, Marina, Almela-Ferrer, Maria Rosario, Gonzalo-Jiménez, Nieves, Ruiz-García, Maria Montserrat, Galiana, Antonio, Sanchez-Almendro, Judith, Cilla, Gustavo, Montes, Milagrosa, Piñeiro, Luis, Sorarrain, Ane, Marimón, José María, Gomez-Ruiz, Maria Dolores, López-Hontangas, José Luis, González Barberá, Eva M., Navarro-Marí, José María, Pedrosa-Corral, Irene, Sanbonmatsu-Gámez, Sara, Pérez-González, Carmen, Chamizo-López, Francisco, Bordes-Benítez, Ana, Navarro, David, Albert, Eliseo, Torres, Ignacio, Gascón, Isabel, Torregrosa-Hetland, Cristina Juana, Pastor-Boix, Eva, Cascales-Ramos, Paloma, Fuster-Escrivá, Begoña, Gimeno-Cardona, Concepción, Ocete, María Dolores, Medina-Gonzalez, Rafael, González-Cantó, Julia, Martínez-Macias, Olalla, Palop-Borrás, Begoña, de Toro, Inmaculada, Mediavilla-Gradolph, Maria Concepción, Pérez-Ruiz, Mercedes, González-Recio, Óscar, Gutiérrez-Rivas, Mónica, Simarro-Córdoba, Encarnación, Lozano-Serra, Julia, Robles-Fonseca, Lorena, de Salazar, Adolfo, Viñuela-González, Laura, Chueca, Natalia, García, Federico, Gómez-Camarasa, Cristina, de la Puente, Raul, Farga-Martí, Maria Amparo, Domínguez-Márquez, Victoria, Costa-Alcalde, José Javier, Trastoy, Rocío, Barbeito-Castiñeiras, Gema, Coira, Amparo, Pérez-del-Molino, María Luisa, Aguilera, Antonio, Planas, Anna M., Soriano, Alex, Fernandez-Cádenas, Israel, Pérez-Tur, Jordi, Marcos, Maria Ángeles, Moreno-Docón, Antonio, Viedma, Esther, Mingorance, Jesús, Galán-Montemayor, Juan Carlos, Parra-Grande, Mónica, Stadler, Tanja, Neher, Richard A., Carvajal Urueña, Ana María, Martín Sánchez, Vicente, Fregeneda Grandes, Juan Miguel, Molina de la Torre, Antonio José, Argüello Rodríguez, Héctor, and Fernández Villa, Tania
- Abstract
[EN] Following its emergence in late 2019, the spread of SARS-CoV-21,2 has been tracked by phylogenetic analysis of viral genome sequences in unprecedented detail3,4,5. Although the virus spread globally in early 2020 before borders closed, intercontinental travel has since been greatly reduced. However, travel within Europe resumed in the summer of 2020. Here we report on a SARS-CoV-2 variant, 20E (EU1), that was identified in Spain in early summer 2020 and subsequently spread across Europe. We find no evidence that this variant has increased transmissibility, but instead demonstrate how rising incidence in Spain, resumption of travel, and lack of effective screening and containment may explain the variant’s success. Despite travel restrictions, we estimate that 20E (EU1) was introduced hundreds of times to European countries by summertime travellers, which is likely to have undermined local efforts to minimize infection with SARS-CoV-2. Our results illustrate how a variant can rapidly become dominant even in the absence of a substantial transmission advantage in favourable epidemiological settings. Genomic surveillance is critical for understanding how travel can affect transmission of SARS-CoV-2, and thus for informing future containment strategies as travel resumes.
45. Extremely low genetic variability within and among locations of the greenfish holothurian Stichopus chloronotus Brandt, 1835 in Okinawa, Japan.
- Author
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Soliman T, Takama O, Fernandez-Silva I, and Reimer JD
- Abstract
The greenfish sea cucumber Stichopus chloronotus is an economically and ecologically important sea cucumber species throughout its range. This species is widely distributed, inhabiting coral reefs of the Indo-Pacific Ocean. Our study evaluated population genetic structure and levels of genetic diversity in southern Japan. A total of 180 individuals were collected from eight locations from Okinawa and Okinoerabu Islands and sequenced using mitochondrial 16S ribosomal DNA (16S) and nuclear histone H3 (H3) gene. Only three 16S haplotypes were detected (518 bp) with haplotype diversity ranging from 0 to 0.56 and nucleotide diversity from 0 to 0.1%. H3 showed no variation among the studied locations. It is plausible that such results could be due to a shift to asexual reproduction . Additionally, the presence of the species on the east coast of Okinawa could only be detected in one location and all individuals consisted of a single haplotype. Genetic differences between the east and west coasts of Okinawa have been noticed in other coral reef organisms, and attributed to either ecological or biogeographical historical differences between the coasts due to differing levels of isolation during Pleistocene ice ages. Results from the present study should inform management and conservation policies of S. chloronotus in southern Japan., Competing Interests: James Reimer is an Academic Editor for PeerJ.
- Published
- 2016
- Full Text
- View/download PDF
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