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36 results on '"Filion GJ"'

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1. Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration

2. Causality in transcription and genome folding: Insights from X inactivation.

3. Chromatin and viral integration in immunity: The challenge of silencing non-self genes.

4. Strand asymmetry influences mismatch resolution during a single-strand annealing.

7. Chromosome compartments on the inactive X guide TAD formation independently of transcription during X-reactivation.

8. Calibrating Seed-Based Heuristics to Map Short Reads With Sesame.

9. Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.

10. Transcription factors and 3D genome conformation in cell-fate decisions.

11. An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape.

12. OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes.

13. Theoretical principles of transcription factor traffic on folded chromatin.

14. A New Quinoline BRD4 Inhibitor Targets a Distinct Latent HIV-1 Reservoir for Reactivation from Other "Shock" Drugs.

15. Using Barcoded HIV Ensembles (B-HIVE) for Single Provirus Transcriptomics.

16. Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming.

17. Methylation of DNA Ligase 1 by G9a/GLP Recruits UHRF1 to Replicating DNA and Regulates DNA Methylation.

18. Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors.

19. Clustering of Drosophila housekeeping promoters facilitates their expression.

20. Position effects influence HIV latency reversal.

21. Zerone: a ChIP-seq discretizer for multiple replicates with built-in quality control.

22. Machine Learning: How Much Does It Tell about Protein Folding Rates?

24. Starcode: sequence clustering based on all-pairs search.

25. The signed Kolmogorov-Smirnov test: why it should not be used.

26. A network model of the molecular organization of chromatin in Drosophila.

27. The inner nuclear membrane proteins Man1 and Ima1 link to two different types of chromatin at the nuclear periphery in S. pombe.

28. Systematic protein location mapping reveals five principal chromatin types in Drosophila cells.

29. Bayesian network analysis of targeting interactions in chromatin.

31. Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic.

33. Transmission and immunity: the importance of heterogeneity in the fight against malaria.

34. [Epigenetics and cancer].

35. A family of human zinc finger proteins that bind methylated DNA and repress transcription.

36. The human enhancer blocker CTC-binding factor interacts with the transcription factor Kaiso.

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