120 results on '"Flt3 gene"'
Search Results
2. Identification of a novel mutation of the FLT3 gene located on the juxtamembrane domain from acute myeloid leukemia patients
- Author
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Arwanih, Elly Yanah, Rinaldi, Ikhwan, Wanandi, Septelia Inawati, and Louisa, Melva
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- 2024
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3. T cell phenotype and lack of eosinophilia are not uncommon in extramedullary myeloid/lymphoid neoplasms with ETV6::FLT3 fusion: a case report and review of the literature.
- Author
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Schoelinck J, Gervasoni J, Guillermin Y, Beillard E, Pissaloux D, and Chassagne-Clement C
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- Humans, Male, Myeloproliferative Disorders genetics, Myeloproliferative Disorders pathology, Myeloproliferative Disorders diagnosis, Middle Aged, ETS Translocation Variant 6 Protein, Proto-Oncogene Proteins c-ets genetics, fms-Like Tyrosine Kinase 3 genetics, Eosinophilia pathology, Eosinophilia genetics, Phenotype, Repressor Proteins genetics, Oncogene Proteins, Fusion genetics
- Abstract
In the 2022, WHO and ICC classifications, myeloid/lymphoid neoplasms with eosinophilia (M/LN-eo) and tyrosine kinase gene fusions represent rare hematologic malignancies driven by rearrangements of PDGFRA, PDGFRB, FGFR1, JAK2, FLT3, and ETV6::ABL1 fusion. Eosinophilia is the most constant finding, whereas the clinicopathological features are quite heterogeneous, presenting as Chronic eosinophilic leukemia (CEL) NOS, myelodysplastic/myeloproliferative neoplasm (MDS/MPN), MDS, MPN, systemic mastocytosis (SM), T or B cell acute lymphoblastic leukemia/lymphoblastic lymphoma (ALL/LBL), acute myeloid leukemia (AML), blastic phase of MPN, or mixed phenotype acute leukemia (MPAL). Extramedullary involvement at diagnosis or during progression is common. Here, we report a very unusual case of myeloid/lymphoid neoplasm with ETV6::FLT3 fusion with a nodal presentation without associated eosinophilia. Our case draws attention to diagnostic pitfalls in these rare entities., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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4. Detection and Quantification of FLT3 Internal Tandem Duplication Mutations Do Not Vary Significantly Between Whole Blood and Blast-Enriched Samples.
- Author
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Schumacher, Jonathan A, Holgard, Victoria D, Sial, Faryal, Pearson, Lauren N, Patel, Jay L, and Karner, Kristin H
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BLOOD sampling , *PROTEIN-tyrosine kinases , *POLYMERASE chain reaction , *CAPILLARY electrophoresis , *NUCLEOTIDE sequencing , *GENETIC mutation , *SEQUENCE analysis , *CHRONIC myeloid leukemia , *ACUTE myeloid leukemia , *ALLELES , *TRANSFERASES , *GENOMES - Abstract
Objectives: Many commonly used FLT3 mutational assay protocols require a tedious blast enrichment step. We investigated whether elimination of this step would still give equivalent results and compared the accuracy of variant allele fraction (VAF) between polymerase chain reaction/capillary electrophoresis (PCR/CE) vs next-generation sequencing (NGS) methods.Methods: Total leukocyte vs blast-enriched whole-blood aliquots were tested for FLT3 internal tandem duplication (ITD) and tyrosine kinase domain mutations by PCR/CE. VAF of the ITD mutations was also compared with NGS VAF.Results: Blast-enriched vs total leukocyte specimens showed 100% concordance in the 25 positive specimens. VAF was consistently lower by NGS, with poorer fidelity to PCR/CE VAF as the ITD size increased.Conclusions: Our study supports elimination of the blast enrichment step without compromising results or sensitivity. In addition, since NGS shows a loose correlation with PCR/CE quantitative results, NGS VAF should not be reported for FLT3 ITDs. [ABSTRACT FROM AUTHOR]- Published
- 2020
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5. HOXA9 mediates and marks premalignant compartment size expansion in colonic adenomas.
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Janmaat, Vincent T, Liu, Hui, Silva, Rodrigo A da, Wisse, Pieter H A, Spaander, Manon C W, Hagen, Timo L M Ten, Smits, Ron, Bruno, Marco J, Fuhler, Gwenny M, and Peppelenbosch, Maikel P
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ADENOMATOUS polyps , *CARCINOMA , *ETIOLOGY of diseases , *SOMATOMEDIN , *GROWTH factors - Abstract
The transformation of normal colonic epithelium to colorectal cancer (CRC) involves a relatively ordered progression, and understanding the molecular alterations involved may aid rational design of strategies aimed at preventing or counteracting disease. Homeobox A9 (HOXA9) is an oncogene in leukemia and has been implicated in CRC pathology, although its role in disease etiology remains obscure at best. We observe that HOXA9 expression is increased in colonic adenomas compared with location-matched healthy colon epithelium. Its forced expression results in dramatic genetic and signaling changes, with increased expression of growth factors IGF1 and FLT3 , super-activity of the AKT survival pathway and a concomitant increase in compartment size. Furthermore, a reduced mRNA expression of the epithelial to mesenchymal transition marker N-cadherin as well as reduced activity of the actin cytoskeletal mediator PAK was seen, which is in apparent agreement with an observed reduced migratory response in HOXA9- overexpressing cells. Thus, HOXA9 appears closely linked with adenoma growth while impairing migration and metastasis and hence is both a marker and driver of premalignant polyp growth. Colonic polyps grow but remain premalignant for up to decades. Here, we show that HOXA9 drives growth in premalignant polyps, but simultaneously prevents further transformation. [ABSTRACT FROM AUTHOR]
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- 2019
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6. Investigating and comparing the effects of lead poisoning in the rate of Flt3 gene expression in Acute Myeloid Leukemia (AML) and the value of its proteins synthesis in adult male rats.
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Mottahedzadeh, Razieh, Khatamsaz, Saeed, and Mokhtari, Mohammad Javad
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GENE expression , *ACUTE myeloid leukemia , *PROTEIN synthesis , *POLLUTANTS , *CANCER prevention - Abstract
Nowadays, cancer is undoubtedly one of the main and most common causes of human mortality. Recent studies have proved the origin and genetic source of many types of cancers. One of the main causes of genetic changes leading to the prevalence of cancer is exposure to various environmental pollutants in the living environment. The present study aims to investigate the possible effects of poisoning with lead compounds on the expression of an important gene of flt3 involved in the development of Leukemia in healthy rats. A total of 48 male rats were used in this study. Animals were generally divided into 6 groups, including control group, 300 mg / kg.bw sodium sulfide poisoning group, 600 mg / kg.bw sodium sulfide poisoning group, 30 mg / kg.bw lead acetate poisoning group, 60 mg / kg.bw lead acetate poisoning group, 600 mg / kg.bw sodium sulfide plus 60 mg / kg.bw lead acetate poisoning group. In this study, gavage was performed on rats for four months and blood samples were taken after this time. Using protein measurement kits, the value of protein was measured and it was found that in the group that received 600 mg / kg.bw sodium sulfide plus 60 mg / kg.bw lead acetate, the value of protein and gene expression increased significantly compared to other groups. [ABSTRACT FROM AUTHOR]
- Published
- 2019
7. Comparing the epidemiology, clinical characteristics and prognostic factors of acute myeloid leukemia with and without acute promyelocytic leukemia.
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Kamath, Geetanjali R, Tremblay, Douglas, Coltoff, Alexander, Caro, Jessica, Lancman, Guido, Bhalla, Sheena, Najfeld, Vesna, Mascarenhas, John, and Taioli, Emanuela
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ACUTE myeloid leukemia , *DISEASE incidence , *CANCER prognosis , *ACUTE promyelocytic leukemia , *ACUTE myeloid leukemia treatment , *EARLY death - Abstract
Acute promyelocytic leukemia (APL) is a particularly aggressive subtype of acute myeloid leukemia (AML), with high rates of early death. It is important to examine how epidemiological characteristics, clinical and treatment factors, cytogenetic and genetic data affect survival and differ between APL and non-APL AML patients. We analyzed population data from the New York State Cancer Registry to characterize AML including APL incidence rates by demographics. APL incidence rates were higher among Hispanics than non-Hispanics [incidence rate ratio = 1.22; 95% confidence interval (CI) = 1.02–1.43]; and among foreign-born than USA-born persons. APL incidence rates increased more rapidly through 1995–2014 than non-APL AML; and its frequency increased faster among foreign-born persons. In a hospital cohort of 390 AML patients, the risk of death was significantly higher among APL patients with FLT3-internal tandem duplications than those without [hazard ratio (HR) = 11.74; 95% CI = 1.03–134.5]; and among APL patients with secondary versus de novo disease (HR = 17.32; 95% CI = 1.56–192.1). Among non-APL AML patients, risk of death was significantly associated with prior chemotherapy with antitubulin agents after adjusting for age, gender and ethnicity (adjusted HR = 3.30; 95% CI = 1.49–7.32); and separately with older age, unfavorable cytogenetics and complex karyotype. This study highlights FLT3 -internal tandem duplications as a prognostic factor in APL and proposes consideration of prior antitubulin therapy as a prognostic factor in non-APL AML. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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8. FLT3 Gene Mutation in Acute Myeloid Leukemia: Correlation with Hematological, Immunophenotypic, and Cytogenetic Characteristics
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Hemangi D. Joshi, Sunitha Shankaralingappa, Jyoti Sawhney, Prabhudas S. Patel, and Jayendra B. Patel
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Oncology ,medicine.medical_specialty ,Poor prognosis ,acute myeloid leukemia ,Tertiary care ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,hemic and lymphatic diseases ,medicine ,General Materials Science ,RC254-282 ,business.industry ,Myeloid leukemia ,Cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Karyotype ,medicine.disease ,flt3-tkd ,030220 oncology & carcinogenesis ,Mutation (genetic algorithm) ,flt3-itd ,Flt3 gene ,business ,Tyrosine kinase ,030215 immunology - Abstract
Introduction In acute myeloid leukemia (AML), FMS-like tyrosine kinase 3-internal tandem duplication (FLT3-ITD) is a common driver mutation associated with high tumor burden and poor prognosis. This mutation is common in normal karyotype AML and such patients have high leukocyte count. The presence of this mutation can be predicted by certain hematological and immunophenotypic characteristics in day-to-day practice. Objective This study was undertaken to assess the strength of association between FLT3 gene mutation and hematological and immunophenotypic characteristics. Materials and Methods Morphological, hematological, immunophenotypic, and cytogenetic characteristics of FLT3 mutations recorded in 424 patients of AML in adults and children between 2016 and 2019 in a tertiary care cancer center in Western India. Blasts were classified according to French-American-British method. Tumor burden was assessed by serum lactate dehydrogenase (LDH) levels, leucocyte count, and peripheral smear blast percentage. Results Out of 424 cases, FLT3-ITD and FLT3-tyrosine kinase domain mutation were found in 72 and 25 AML patients, respectively. Patients with FLT3 mutation had high tumor burden, characterized by high leukocyte count (p < 0.001), peripheral blood (p = 0.01) and bone marrow (p = 0.03) blast percentage, and high serum LDH (mean 777.8 vs. 586; p = 0.10) compared with FLT3-negative patients. They also featured high platelet count (p < 0.001). Morphological, immunophenotypic, and cytogenetic characteristics also have been presented in the study. Conclusion Observations of the study suggest the presence of definitive hematological and immunophenotypic characteristics along with raised serum LDH levels serve as surrogate markers and indicators of FLT3 mutation in AML patients.
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- 2022
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9. Activated FLT3 Receptor Tyrosine Kinase as a Therapeutic Target In Leukemia
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Scheijen, Blanca, Griffin, James D., Teicher, Beverly A., editor, Fabbro, Doriano, editor, and McCormick, Frank, editor
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- 2006
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10. 13q12.2 deletions and FLT3 overexpression in acute leukemias
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Mariana Boroni, Mariana Emerenciano, and Caroline Pires Poubel
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Precursor Cell Lymphoblastic Leukemia Lymphoma ,Text mining ,Downregulation and upregulation ,business.industry ,Cancer research ,Hematology ,Biology ,Flt3 gene ,business - Published
- 2021
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11. Characteristics and Prognosis of Adult Acute Myeloid Leukemia with Internal Tandem Duplication in the FLT3 Gene
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Adhra Al-Mawali, David Gillis, and Ian Lewis
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Acute Myeloid Leukemia ,M1 ,FLT3 gene ,Tandem duplication ,Prognosis. ,Medicine - Abstract
Objectives: Constitutive activation of the fms-like tyrosine kinase 3 (FLT3) receptor by internal tandem duplication (ITD) of the juxtamembrane region has been described in patients with acute myeloid leukemia. FLT3/ITDs are present in about 20-30% of all acute myeloid leukemia cases. It has been shown that the mutation is correlated with worse prognosis. However, none of the previous studies investigated which FAB subtype is associated with higher percentage of FLT3/ITD, thus the reason for undertaking the current study.Methods: The prevalence and the potential prognostic impact of FLT3 mutations in 39 acute myeloid leukemia patients were analyzed by genomic polymerase chain reaction. Twelve samples with FLT3/ITDs and 27 acute myeloid leukemia samples without the mutations were compared with respect to clinical prognosis and FAB subtype. Results were correlated with cytogenetic data and the clinical response.Results: FLT3/ITD mutations were found in 31% of patients. FLT3/ITD was associated with similar clinical characteristics and was more prevalent in patients with normal karyotype (83%). Interestingly, half of the FLT3/ITD aberrations were found in patients with FAB M1 (50%), and fewer were found in patients with FAB M2 (8%), M4 (8%), and M5 (8%). Although less frequent in patients with cytogenetic aberrations, FLT3/ITDs were found in 17% of patients with t(15;17). Although the study was powered to 80%, patients with FLT3/ITD mutation did not show shorter complete remission duration or a higher relapse rate.Conclusion: The data confirm that FLT3/ITD mutations represent a common alteration in adult acute myeloid leukemia, mainly with normal karyotype (83%) and de novo acute myeloid leukemia (75%), as compared to secondary acute myeloid leukemia (25%) (p
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- 2013
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12. The Relationship Between FLT3 Mutations And Complete Remission Of AML Patients Referring To Shariati Hospital
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Sakineh Abbasi, Abdollatif Ajdari, and Shahin Mohammadi
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Acute Myeloid Leukemia (AML) ,FLT3 Gene ,Complete Remission ,Public aspects of medicine ,RA1-1270 - Abstract
Background and Aim: FLT3 gene is a member of class III receptor Tyrosine Kinase, which is expressed in most patients with acute myeloid leukemia (AML). Mutations of FLT3 such as Internal Tandem Duplication (ITD) and point mutation of the D835 are the most common genetic defects in myeloid leukemia. These two mutations in patients with MLA and their effect on survival rate were studied for the first time in Iran. Materials and Methods: DNA was extracted from the blood or bone marrow samples of 100 patients with AML from October 2008 to September 2009. For further analysis, PCR was performed to determine the prevalence of these mutations and their association with prognosis. Moreover, t and x2 statistical tests were applied for data analysis. Results: According to the results, 15% of patients revealed FLT3-ITD mutations and 8% showed mutation of D835 in FLT3 gene. In terms of achieving complete remission (CR), patients with mutation of ITD had more chance than those without such mutation (83.5% versus 53.3%). The white blood cell count was significantly higher in the ITD+ (mean = 73,646/ml) than ITD- patients (mean = 26,580/ml). Conclusion : The results indicate that FLT3-ITD mutations may reduce the chances of Complete Remission (CR) in patients; however, FLT3-ITD mutation is an important factor in selecting appropriate treatment.
- Published
- 2013
13. Digital Polymerase Chain Reaction Paired with High-Speed Atomic Force Microscopy for Quantitation and Length Analysis of DNA Length Polymorphisms
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A. L. Mikheikin, Jason Reed, Amir A. Toor, Sean Koebley, Alden Chesney, Loren Picco, Daniel Guest, Taha Al Juhaishi, Kevin Leslie, Xiaojie Zhang, Catherine H. Roberts, Wendy McConnell-Wells, and Joshua H Lehman
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Poor prognosis ,Atomic force microscopy ,General Engineering ,General Physics and Astronomy ,DNA ,Sequence Analysis, DNA ,Variant allele ,Computational biology ,Biology ,Amplicon ,Microscopy, Atomic Force ,Polymerase Chain Reaction ,Leukemia, Myeloid, Acute ,chemistry.chemical_compound ,Gene Frequency ,fms-Like Tyrosine Kinase 3 ,chemistry ,Humans ,General Materials Science ,Digital polymerase chain reaction ,Flt3 gene - Abstract
DNA length polymorphisms are found in many serious diseases, and assessment of their length and abundance is often critical for accurate diagnosis. However, measuring their length and frequency in a mostly wild-type background, as occurs in many situations, remains challenging due to their variable and repetitive nature. To overcome these hurdles, we combined two powerful techniques, digital polymerase chain reaction (dPCR) and high-speed atomic force microscopy (HSAFM), to create a simple, rapid, and flexible method for quantifying both the size and proportion of DNA length polymorphisms. In our approach, individual amplicons from each dPCR partition are imaged and sized directly. We focused on internal tandem duplications (ITDs) located within the FLT3 gene, which are associated with acute myeloid leukemia and often indicative of a poor prognosis. In an analysis of over 1.5 million HSAFM-imaged amplicons from cell line and clinical samples containing FLT3-ITDs, dPCR-HSAFM returned the expected variant length and variant allele frequency, down to 5% variant samples. As a high-throughput method with single-molecule resolution, dPCR-HSAFM thus represents an advance in HSAFM analysis and a powerful tool for the diagnosis of length polymorphisms.
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- 2020
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14. FMS-like Tyrosine Kinase 3 (FLT3) Gene as a Significant Biomarker for Acute Myeloid Leukemia
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Roopali Fotra
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business.industry ,Fms-Like Tyrosine Kinase 3 ,Cancer research ,Biomarker (medicine) ,Myeloid leukemia ,Medicine ,General Medicine ,Flt3 gene ,business - Published
- 2020
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15. Enzyme-free and sensitive electrochemical determination of the FLT3 gene based on a dual signal amplified strategy: Controlled nanomaterial multilayers and a target-catalyzed hairpin assembly.
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Sun, Yingying, Ren, Qunxiang, Liu, Bo, Qin, Yan, and Zhao, Shuang
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ELECTROCHEMICAL sensors , *GENE amplification , *NANOSTRUCTURED materials , *HAIRPIN (Genetics) , *MOLECULAR self-assembly , *BIOSENSORS - Abstract
An isothermal, enzyme-free and sensitive electrochemical DNA sensor was developed for the detection of the FLT3 gene in acute myeloid leukemia (AML). First, aminated multi-walled carbon nanotubes (AMWNTs) and gold nanoparticles (AuNPs) were alternately self-assembled on a gold electrode using a layer-by-layer strategy. Then, the hairpin DNA probe 1 (H1), with a thiol group at the 3′ end and a ferrocenyl moiety (Fc) at the 5′ end, was immobilized on the AMWNTs/AuNPs multilayer films through Au–S bonding. When the target DNA (TD) appeared, it hybridized with and opened the hairpin structure of H1, and Fc was forced away from the electrode surface, leading to a significant decrease in the current peak of square wave voltammetry. Subsequently, the hairpin DNA probe 2 (H2) bound to H1, freeing the TD to trigger another reaction cycle. The combination of this target-catalyzed hairpin assembly and the LBL assembly of nanomaterials achieved a detection limit of 0.1 pM with a wide linear range of 0.1–1000 pM. The sensor discriminated between mismatched DNA and the target DNA with high selectivity. This dual signal amplification strategy is relatively simple and inexpensive because it does not need any enzymes or sophisticated equipment and successfully assayed the FLT3 gene from real samples. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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16. Role of FLT3 gene mutations in acute myeloid leukemia: effect on course of disease and results of therapy
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A. M Radzhabova, S. V Voloshin, I. S Martynkevich, A. A Kuzyaeva, VA. Shuvaev, E. V Motyko, A. Y Kuvshinov, M. S Fominykh, A. V Schmidt, L. B Polushkina, M. P Bakay, S. A Tiranova, M. N Zenina, N. A Potihonova, SA. Kudryashova, V. A Balashova, J. V Chubukina, O. S Uspenskaya, E. V Karyagina, A. N Bogdanov, and A. V Chechetkin
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Transplantation ,Biomedical Engineering ,Cancer research ,Myeloid leukemia ,Surgery ,Cell Biology ,Biology ,Flt3 gene ,Molecular Biology ,Biotechnology ,Disease course - Abstract
Detection of FLT3 gene mutations in acute myeloid leukemia is now recognized as an unfavorable factor that affects the disease course, emerging the risk of relapses and overall survival shortening and disease-free survival of patients. The aim of the study was to determine the frequency of mutations of the gene FLT3 and to assess their impact on clinical indicators, overall survival and disease-free survival in patients with acute myeloid leukemia. We compared complete blood count parameters, karyotype, duration of overall survival and disease-free survival in 199 patients with acute myeloid leukemia depending on the presence or absence of mutations of the FLT3 gene. Significant differences across these groups were discovered only in WBC and blasts between the group of patients with acute myeloid leukemia (FLT3+) and without mutations in the FLT3 gene (FLT3-). The differences between two groups were also identified in patients chromosomal aberrations. Significant differences (p=0,00024) in the duration of overall survival between groups of patients with acute myeloid leukemia with mutations of FLT3-ITD+, FLT3-TKD+ and FLT3- were demonstrated. Median overall survival was: 1 6 months for patients with mutation FLT3-ITD+ and 17 months for FLT3-TKD+ patients and not achieved for FLT3- patients. The use of modern molecular genetic methods of research in acute myeloid leukemia allows to improve the diagnosis of the disease, as well as to carry out risk stratification and individualize therapy. The use of targeted therapy for FLT3-positive patients who are not candidates for hematopoietic stem cell transplantation will increase the effectiveness of the treatment and improve the performance of overall survival and disease-free survival.
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- 2019
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17. Incidence of internal tandem duplications and D835 mutations of FLT3 gene in chronic myeloid leukemia patients from Southern India.
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Annamaneni, Sandhya, Kagita, Sailaja, Gorre, Manjula, Digumarti, Raghunadha Rao, Satti, Vishnupriya, and Battini, Mohan Reddy
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GENETIC mutation , *GENETIC polymorphisms , *HEMATOLOGY , *MEDICAL genetics , *CHRONIC myeloid leukemia - Abstract
Objective: To screen two important FLT3 mutations (internal tandem duplication (ITD) and D835 point mutations) in chronic myeloid leukemia (CML) patients from Southern India and report their incidence. Methods: Screened 350 CML patients and 350 controls for the two FLT3/mutations through polymerase chain reaction and restriction fragment length polymorphism methods. Results: ITDs were detected in 12 of the 350 CML patients (3.4%) and D835 mutations in only four cases (1.14%), relatively low in frequency as compared to those reported earlier from non-Indian populations. None of the cases showed simultaneous occurence of both ITD and D835 mutations. Discussion: These FLT3 mutations seem to be very rare in CML, and it is possible that these could be found only in a subset of patients who are in the progressive stage and/or with varied drug response. Prospective studies are needed to confirm the role of FLT3 mutations in CML pathogenesis, which may help devising therapeutic interventions. [ABSTRACT FROM AUTHOR]
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- 2014
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18. Deletions in BCP-ALL result in a TAD more FLT3
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David H. Spencer
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0301 basic medicine ,Genetics ,Lymphoblastic Leukemia ,Immunology ,Locus (genetics) ,Genomics ,hemic and immune systems ,Cell Biology ,Hematology ,Biology ,Biochemistry ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,hemic and lymphatic diseases ,Flt3 gene ,Gene ,BLOOD Commentary ,030215 immunology - Abstract
The molecular consequences of coding mutations can often be predicted simply from their effect on a gene’s sequence. Noncoding mutations require more work. In this issue of Blood, Yang and colleagues(1) use 3D genomics to make an important contribution to the list of functional noncoding mutations in cancer. They show that microdeletions at 13q12.2 in B-cell precursor acute lymphoblastic leukemia (BCP-ALL) eliminate the boundary of a topologically associated domain (TAD) at the FLT3 locus, which results in higher expression of FLT3, an important driver gene in acute leukemias.
- Published
- 2020
19. Characteristics and Prognosis of Adult Acute Myeloid Leukemia with Internal Tandem Duplication in the FLT3 Gene.
- Author
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Al-Mawali, Adhra, Gillis, David, and Lewis, Ian
- Subjects
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ACUTE myeloid leukemia , *CONFIDENCE intervals , *GENETIC mutation , *POLYMERASE chain reaction , *PROTEIN kinases , *RESEARCH funding , *DATA analysis software , *DESCRIPTIVE statistics , *KAPLAN-Meier estimator , *ADULTS , *GENETICS , *PROGNOSIS - Abstract
Objectives: Constitutive activation of the fms-like tyrosine kinase 3 (FLT3) receptor by internal tandem duplication (ITD) of the juxtamembrane region has been described in patients with acute myeloid leukemia. FLT3/ITDs are present in about 20-30% of all acute myeloid leukemia cases. It has been shown that the mutation is correlated with worse prognosis. However, none of the previous studies investigated which FAB subtype is associated with higher percentage of FLT3/ITD, thus the reason for undertaking the current study. Methods: The prevalence and the potential prognostic impact of FLT3 mutations in 39 acute myeloid leukemia patients were analyzed by genomic polymerase chain reaction. Twelve samples with FLT3/ITDs and 27 acute myeloid leukemia samples without the mutations were compared with respect to clinical prognosis and FAB subtype. Results were correlated with cytogenetic data and the clinical response. Results: FLT3/ITD mutations were found in 31% of patients. FLT3/ITD was associated with similar clinical characteristics and was more prevalent in patients with normal karyotype (83%). Interestingly, half of the FLT3/ITD aberrations were found in patients with FAB M1 (50%), and fewer were found in patients with FAB M2 (8%), M4 (8%), and M5 (8%). Although less frequent in patients with cytogenetic aberrations, FLT3/ITDs were found in 17% of patients with t(15;17). Although the study was powered to 80%, patients with FLT3/ITD mutation did not show shorter complete remission duration or a higher relapse rate. Conclusion: The data confirm that FLT3/ITD mutations represent a common alteration in adult acute myeloid leukemia, mainly with normal karyotype (83%) and de novo acute myeloid leukemia (75%), as compared to secondary acute myeloid leukemia (25%) (p<0.001). It also showed that half of the M1-FAB subtype is FLT3/ITD positive. Therefore, FLT3/ITD is a therapeutic target, and thus inhibition of FLT3 tyrosine kinease activity may provide a new approach in the treatment of leukemia carrying these mutations. [ABSTRACT FROM AUTHOR]
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- 2013
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20. The Relationship Between FLT3 Mutations And Complete Remission Of AML Patients Referring To Shariati Hospital.
- Author
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Abbasi, Sakineh, Ajdari, Abdollatif, and Mohammadi, Shahin
- Abstract
Background and Aim: FLT3 gene is a member of class III receptor Tyrosine Kinase, which is expressed in most patients with acute myeloid leukemia (AML). Mutations of FLT3 such as Internal Tandem Duplication (ITD) and point mutation of the D835 are the most common genetic defects in myeloid leukemia. These two mutations in patients with MLA and their effect on survival rate were studied for the first time in Iran. Materials and Methods: DNA was extracted from the blood or bone marrow samples of 100 patients with AML from October 2008 to September 2009. For further analysis, PCR was performed to determine the prevalence of these mutations and their association with prognosis. Moreover, t and x2 statistical tests were applied for data analysis. Results: According to the results, 15% of patients revealed FLT3-ITD mutations and 8% showed mutation of D835 in FLT3 gene. In terms of achieving complete remission (CR), patients with mutation of ITD had more chance than those without such mutation (83.5% versus 53.3%). The white blood cell count was significantly higher in the ITD+ (mean = 73,646/ml) than ITD- patients (mean = 26,580/ml). Conclusion: The results indicate that FLT3-ITD mutations may reduce the chances of Complete Remission (CR) in patients; however, FLT3-ITD mutation is an important factor in selecting appropriate treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2013
21. FMS-LIKE TYROSINE KINASE (FLT3) GENE ITD MUTATION IN ACUTE MYELOID LEUKEMIA
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Rajko Kusec, Maruska Marusic Vrsalovic, Tanja Vranic Bobetic, Slobodanka Ostojic, Hrvoje Mingo, and Branimir Jaksic
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FLT3 gene ,leukemia ,internal tandem duplication ,prognostics ,cytogenetics ,Medicine - Abstract
Background. FLT3 is a class III receptor tyrosine kinase expressed in normal stem cells and blasts of myeloid leukemia. Internal tandem duplication (ITD) of the FLT3 gene affecting the exons 14 and 15 leads to ligand-independent FLT3 dimerization and constitutive activation. This stimulates proliferation and induces inhibition of apoptosis which contributes to leukemogenesis. We have screened a panel of acute myeloid leukemia (AML) patients for the occurrence of FLT3/ITD mutation and correlated this mutation to patients’ survival and basic hematological parameters.Methods. RT-PCR for ITD in exons 14 and 15 of FLT3 gene was done on bone marrow samples of 67 AML patients at diagnosis.Results. There was a 16.4% incidence of FLT3/ITD mutation in the cohort of examined patients. By cytognetic subgroups there were 2/6 t(15;17) and 1 of 4 t(8;21) positive patients. The rest had normal and 2 had complex karyotype. Majority were of FAB M2 or M4 phenotype. For a subset of patients taken into comparative survival analysis there was a clear disadvantage for FLT3/ITD patients. No difference was found for basic hematological parameters between two groups.Conclusions. As it is evident today that FLT3/ITD is the single most common genetic abnormality in AML that also presents unfavorable clinical prognostic marker, it should be included in molecular diagnostic testing of acute myeloid leukemia.
- Published
- 2004
22. Inferior prognostic outcome in acute promyelocytic leukemia with alterations of FLT3 gene.
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Yoo, Soo Jin, Park, Chan Jeoung, Jang, Seongsoo, Seo, Eul-Ju, Lee, Kyoo-Hyung, and Chi, Hyun Sook
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ACUTE myeloid leukemia , *DRUG therapy , *GENETIC mutation , *PROTEIN-tyrosine kinases , *DEATH rate , *AGE , *GENDER , *KOREANS - Abstract
Alterations of the FLT3 gene, in the form of internal tandem duplications (ITD) and D835 point mutations, occur frequently in acute promyelocytic leukemia (APL). We therefore evaluated the frequency and clinical relevance of FLT3 aberrations in a series of Korean APL patients. We assayed FLT3 ITD and D835 mutation status in 75 newly diagnosed APL patients and we correlated the presence of these mutations with clinical parameters and outcomes. Of the 75 patients, fifteen (20.0%) carried FLT3 mutations, nine (12.0%) with FLT3 ITD, seven (9.3%) with D835 mutations and one with both types. Patients presenting with higher leukocyte counts (>10×109/L) had a significantly higher frequency of FLT3 ITD (P = 0.030). There was no association between FLT3 aberrations and other clinicohematologic features including age, gender, M3 variant morphology and PML/RARα subtype. Death at presentation before induction chemotherapy was significantly more frequent in patients with ITD than in those without ITD (33.3% vs. 4.5%, P = 0.020), but was not significantly related to the presence of D835 mutations (28.6% vs. 5.9%, P = 0.094). Both ITD and D835 mutations were associated with shortened event-free survival (P = 0.048 and P = 0.029, respectively), but there was no correlation between disease-free survival among the 61 patients who achieved complete remission and the presence of FLT3 mutations (P = 0.543 for ITD and P = 0.277 for D835). FLT3 mutations were less frequent in Korean APL patients than in Western APL patients. In Korean patients, however, FLT3 mutations were associated with higher leukemic burdens and early deaths before remission resulting in inferior prognosis. [ABSTRACT FROM AUTHOR]
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- 2006
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23. Outcome of older (≥70 years) APL patients frontline treated with or without arsenic trioxide-an International Collaborative Study
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Pierre Fenaux, Ana Garrido, David Martínez-Cuadrón, Uwe Platzbecker, Gabriel Ghiaur, Olga Salamero, Javier de la Serna, Lionel Adès, Sabine Kayser, Norbert Vey, Richard F. Schlenk, Xavier Thomas, Eva Lengfelder, Pau Montesinos, Arnaud Pigneux, Ramy Rahmé, Agnès Guerci-Bresler, Miguel A. Sanz, Marta Sobas, Cristina Gil, Mar Tormo, Mark J. Levis, Emmanuel Raffoux, Institut Català de la Salut, [Kayser S] Medical Clinic and Policlinic I, Hematology and Cellular Therapy, University Hospital Leipzig, Leipzig, Germany. German Cancer Research Center (DKFZ), Heidelberg, Germany. Department of Internal Medicine V, Heidelberg University Hospital, Heidelberg, Germany. [Rahmé R] Hôpital Saint Louis, Université Paris Diderot, Paris, France. [Martínez-Cuadrón D] Hematology Department, Hospital Universitari i Politècnic, La Fe, Avinguda Fernando Abril Martorell, 106, 46026 València, Spain. CIBERONC, Instituto Carlos III, Madrid, Spain. [Ghiaur G] Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA. [Thomas X] Hospices Civils de Lyon, Centre Hospitalier Lyon-Sud, Pierre Bénite, Lyon, France. [Sobas M] Department of Hematology, Blood Neoplasms and Bone Marrow Transplantation, Wroclaw Medical University, Wroclaw, Poland. [Salamero O] Vall d’Hebron Hospital Universitari, Barcelona, Spain, and Vall d'Hebron Barcelona Hospital Campus
- Subjects
Male ,Cancer Research ,ANTHRACYCLINE MONOCHEMOTHERAPY ,Myeloid ,medicine.medical_treatment ,International Cooperation ,ACUTE PROMYELOCYTIC LEUKEMIA ,Leucèmia mieloide aguda - Quimioteràpia ,Other subheadings::Other subheadings::/drug therapy [Other subheadings] ,Gastroenterology ,chemistry.chemical_compound ,Remission induction ,Arsenic Trioxide ,Antineoplastic Combined Chemotherapy Protocols ,Cumulative incidence ,Arsenic trioxide ,ELDERLY-PATIENTS ,Aged, 80 and over ,ADDITIONAL CHROMOSOME-ABNORMALITIES ,Remission Induction ,Neoplasms::Neoplasms by Histologic Type::Leukemia::Leukemia, Myeloid::Leukemia, Myeloid, Acute [DISEASES] ,Hematology ,Leukemia ,Leukemia, Myeloid, Acute ,medicine.anatomical_structure ,Treatment Outcome ,Oncology ,Female ,FLT3 GENE ,Acute promyelocytic leukemia ,medicine.medical_specialty ,Otros calificadores::Otros calificadores::/farmacoterapia [Otros calificadores] ,ACUTE MYELOID-LEUKEMIA ,Article ,Acute myeloid leukaemia ,neoplasias::neoplasias por tipo histológico::leucemia::leucemia mieloide::leucemia mieloide aguda [ENFERMEDADES] ,Internal medicine ,White blood cell ,medicine ,Humans ,Clinical genetics ,neoplasms ,CONSOLIDATION THERAPY ,Aged ,Chemotherapy ,business.industry ,organic chemicals ,diagnóstico::pronóstico::resultado del tratamiento [TÉCNICAS Y EQUIPOS ANALÍTICOS, DIAGNÓSTICOS Y TERAPÉUTICOS] ,Correction ,biochemical phenomena, metabolism, and nutrition ,Diagnosis::Prognosis::Treatment Outcome [ANALYTICAL, DIAGNOSTIC AND THERAPEUTIC TECHNIQUES, AND EQUIPMENT] ,medicine.disease ,TANDEM DUPLICATION ,bacterial infections and mycoses ,biological factors ,RISK-ADAPTED TREATMENT ,TRANS-RETINOIC ACID ,chemistry ,Avaluació de resultats (Assistència sanitària) ,business - Abstract
Data on outcome in older (≥70 years) patients with acute promyelocytic leukemia after treatment with arsenic trioxide (ATO) compared with standard chemotherapy (CTX) is scarce. We evaluated 433 patients (median age, 73.4 years) treated either with ATO+ all-trans retinoic acid (ATO/ATRA; n = 26), CTX/ATRA + ATO during consolidation (CTX/ATRA/ATO; n = 148), or with CTX/ATRA (n = 259). Median follow-up for overall survival (OS) was 4.8 years. Complete remissions (CR) were achieved in 92% with ATO/ATRA and 82% with CTX/ATRA; induction death rates were 8% and 18%, respectively. For analysis of postremission outcomes we combined the ATO/ATRA and CTX/ATRA/ATO groups (ATO/ATRA ± CTX). Cumulative incidence of relapse (CIR) was significantly lower after ATO/ATRA ± CTX compared with CTX/ATRA (P P = 0.20). High (>10 × 109/l) white blood cell (WBC) counts at diagnosis were associated with higher CIR (P P = 0.48). ATO, when added to ATRA or CTX/ATRA is feasible and effective in elderly patients for remission induction and consolidation, particularly in patients with high WBC at diagnosis.
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- 2019
24. The Impact of Flt3 Gene Mutations in Acute Promyelocytic Leukemia: A Meta-Analysis
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Gledson L. Picharski, Raul C. Ribeiro, Bonald C. Figueiredo, Ana Luiza M. R. Fabro, Diancarlos P. Andrade, Fernanda S. Tonin, and Luana Lenzi
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0301 basic medicine ,Oncology ,Acute promyelocytic leukemia ,Cancer Research ,medicine.medical_specialty ,Funnel plot ,FLT3-ITD ,Review ,WBC ,medicine.disease_cause ,lcsh:RC254-282 ,03 medical and health sciences ,fluids and secretions ,0302 clinical medicine ,Internal medicine ,White blood cell ,hemic and lymphatic diseases ,medicine ,FLT3-D835 ,Mutation ,business.industry ,hemic and immune systems ,Publication bias ,acute promyelocytic leukemia ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,APL ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Meta-analysis ,Relative risk ,embryonic structures ,Flt3 gene ,business - Abstract
The association of FLT3 mutations with white blood cell (WBC) counts at diagnosis and early death was studied in patients with acute promyelocytic leukemia (APL). Publications indexed in databases of biomedical literature were analyzed. Potential publication bias was evaluated by analyzing the standard error in funnel plots using the estimated relative risk (RR). Mixed-effect models were used to obtain the consolidated RR. All analyses were conducted using the R statistical software package. We used 24 publications in the final meta-analysis. Of 1005 males and 1376 females included in these 24 publications, 645 had FLT3-ITD (internal tandem duplication) mutations. Information on FLT3-D835 mutations was available in 10 publications for 175 patients. Concurrent occurrence of the two mutations was rare. WBC count at diagnosis was ≥10 × 109/L in 351 patients. For patients with the FLT3-ITD mutation, RR was 0.59 for overall survival (OS) and 1.62 for death during induction. For those with FLT3-D835 mutations, the RR was 0.50 for OS and 1.77 for death during induction. RR for WBC count ≥10 × 109/L was 3.29 and 1.48 for patients with FLT3-ITD and FLT3-D835, respectively. APL patients with FLT3-ITD or FLT3-D835 are more likely to present with elevated WBC counts and poorer prognosis than those without these mutations.
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- 2019
25. Higher daunorubicin exposure benefits FLT3 mutated acute myeloid leukemia
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Alan Kenneth Burnett, Nigel H. Russell, and Robert Kerrin Hills
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Daunorubicin ,Immunology ,Context (language use) ,Outcome assessment ,Bioinformatics ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Outcome Assessment, Health Care ,Humans ,Medicine ,Survival analysis ,Antibiotics, Antineoplastic ,Dose-Response Relationship, Drug ,business.industry ,Myeloid leukemia ,Cell Biology ,Hematology ,medicine.disease ,Survival Analysis ,Dose–response relationship ,Leukemia ,fms-Like Tyrosine Kinase 3 ,Leukemia, Myeloid ,Tandem Repeat Sequences ,030220 oncology & carcinogenesis ,Acute Disease ,Mutation ,Cancer research ,business ,Flt3 gene ,030215 immunology ,medicine.drug - Abstract
To the editor: Whether, and for which patients with acute myeloid leukemia, the dose of daunorubicin in induction should be 90 mg/m2 continues to be discussed. There seems little doubt that 90 mg/m2 is superior to a 45 mg/m2 dose.[1][1][⇓][2]-[3][3] In this context, the reports from the Eastern
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- 2016
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26. Prognosis of Patients with Acute Myeloid Leukemia Regarding the Presence FLT3 Gene Mutation – a Case Report
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Árpád Bzduch, István Benedek, Szilárd Bíró, Johanna Sándor-Kéri, and Erzsébet Lázár
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0301 basic medicine ,business.industry ,Myeloid leukemia ,acute myeloid leukemia ,stem cell transplantation ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,hemic and lymphatic diseases ,030220 oncology & carcinogenesis ,Mutation (genetic algorithm) ,Cancer research ,Medicine ,business ,Flt3 gene ,ftl3 mutation - Abstract
Acute myeloid leukemia (AML) is a cancerous disease affecting the myeloid line of the bone marrow cells. FLT3, also known as CD135, is a proto-oncogene, which, if mutated, leads to different types of cancer. The protein it encodes presents tyrosine-kinase activity, and its intratandem mutation, FLT3-ITD, leads to uncontrolled proliferation of myeloblasts and worse outcomes in AML patients. There are currently several pharmacological agents that can inhibit the effect of either the proteins with tyrosine-kinase activity or the mutated FLT3 gene. We present the case of a 68-year-old patient, smoker, with a history of arterial hypertension, chronic obstructive pulmonary disease, presenting with headache unresponsive to antalgics, dyspnea after physical exertion, and epistaxis, with onset 2 months prior to his presentation. The patient was diagnosed with AML with positive FTL3 mutation for which conventional induction therapy was initiated. Within the next days, the patient presented several complications related to the disease itself or caused by the treatment, which eventually led to his death.
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- 2017
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27. FLT3 dancing on the stem cell
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Mark J. Levis
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0301 basic medicine ,Mutation ,Immunology ,Disease ,Biology ,News ,medicine.disease_cause ,Leukemic Hematopoietic Stem Cell ,Hematopoietic Stem Cells ,Insights ,03 medical and health sciences ,030104 developmental biology ,fms-Like Tyrosine Kinase 3 ,Flt3 mutation ,medicine ,Cancer research ,Neoplastic Stem Cells ,Immunology and Allergy ,Humans ,Stem cell ,Flt3 gene - Abstract
Whether or not FLT3 mutations are present and expressed within a leukemic hematopoietic stem cell has engendered some controversy. New evidence has now been presented on this issue that could change the way we manage the disease in the future.
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- 2017
28. Identification of FLT3 and NPM1 Mutations in Patients with Acute Myeloid Leukaemia
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Zubaidah Zakaria, Nor Rizan Kamaluddin, Zahidah Abu Seman, Nor Amalina Zulkiply, Yuslina Mat Yusoff, Julia Abdullah, Norodiyah Othman, and Ezalia Esa
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0301 basic medicine ,Oncology ,Male ,DNA Mutational Analysis ,medicine.disease_cause ,FLT3 gene ,law.invention ,0302 clinical medicine ,law ,hemic and lymphatic diseases ,Medicine ,FLT3 ,Polymerase chain reaction ,Sanger sequencing ,Aged, 80 and over ,education.field_of_study ,Mutation ,Nuclear Proteins ,hemic and immune systems ,General Medicine ,Middle Aged ,Prognosis ,Leukemia, Myeloid, Acute ,030220 oncology & carcinogenesis ,embryonic structures ,symbols ,Female ,Nucleophosmin ,NPM1 gene ,Research Article ,Adult ,medicine.medical_specialty ,NPM1 ,Adolescent ,Concordance ,Population ,ITD gene ,DNA sequencing ,Acute myeloid leukaemia ,03 medical and health sciences ,symbols.namesake ,Young Adult ,FLT3-D835 gene ,Internal medicine ,Biomarkers, Tumor ,Humans ,education ,Gene ,Aged ,business.industry ,030104 developmental biology ,fms-Like Tyrosine Kinase 3 ,business ,Follow-Up Studies - Abstract
Objective: The most frequent acquired molecular abnormalities and important prognostic indicators in patients with Acute Myeloid Leukaemia (AML) are fms-like tyrosine kinase-3 gene (FLT3) and nucleophosmin-1 (NPM1) mutations. Our study aims to develop a cost effective and comprehensive in-house conventional PCR method for detection of FLT3-ITD, FLT3-D835 and NPM1 mutations and to evaluate the frequency of these mutations in patients with cytogenetically normal (CN) AML in our population. Methods: A total of 199 samples from AML patients (95 women, 104 men) were included in the study. Mutation analyses were performed using polymerase chain reaction (PCR) and gene sequencing. Result: Sixty-eight patients were positive for the mutations. FLT3-ITD mutations were detected in 32 patients (16.1%), followed by FLT3-D835 in 5 (2.5%) and NPM1 in 54 (27.1%). Double mutations of NPM1 and FLT3-ITD were detected in 23 cases (11.6%). Assays validation were performed using Sanger sequencing and showed 100% concordance with in house method. Conclusion: The optimized in-house PCR assays for the detection of FLT3-ITD, FLT3-D835 and NPM1 mutations in AML patients were robust, less labour intensive and cost effective. These assays can be used as diagnostic tools for mutation detection in AML patients since identification of these mutations are important for prognostication and optimization of patient care.
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- 2018
29. FLT3 pathway is a potential therapeutic target for PRC2-mutated T-cell acute lymphoblastic leukemia
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Wenyu Yang, Man Zhang, Li Zhang, Xiaojuan Chen, Yumei Chen, Peng Wu, Yingchi Zhang, Ye Guo, Xiaofan Zhu, Chao Liu, Xiao-Ming Liu, Youjia Cao, Tao Cheng, Yao Zou, Jie Yin, and Jingliao Zhang
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0301 basic medicine ,Male ,T cell ,Lymphoblastic Leukemia ,Immunology ,medicine.disease_cause ,Precursor T-Cell Lymphoblastic Leukemia-Lymphoma ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,Humans ,Mutation ,biology ,business.industry ,Polycomb Repressive Complex 2 ,Cell Biology ,Hematology ,030104 developmental biology ,medicine.anatomical_structure ,fms-Like Tyrosine Kinase 3 ,030220 oncology & carcinogenesis ,Pediatric malignancy ,biology.protein ,Cancer research ,Female ,Flt3 gene ,business ,PRC2 ,Signal Transduction - Abstract
TO THE EDITOR: Acute lymphoblastic leukemia (ALL) is the most common pediatric malignancy, and T-cell ALL (T-ALL) accounts for approximately 15% of cases of childhood ALL.[1][1],[2][2] Early T-cell precursor ALL (ETP-ALL) is a recently recognized subtype of T-ALL.[3][3],[4][4] Hallmarks of T-ALL
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- 2018
30. Arsenic and old FLT3
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Mark Levis
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0301 basic medicine ,Acute promyelocytic leukemia ,Immunology ,Retinoic acid ,chemistry.chemical_element ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,fluids and secretions ,0302 clinical medicine ,hemic and lymphatic diseases ,Medicine ,Receptor ,neoplasms ,Arsenic ,business.industry ,hemic and immune systems ,Cell Biology ,Hematology ,medicine.disease ,030104 developmental biology ,chemistry ,embryonic structures ,Cancer research ,Tandem exon duplication ,Flt3 gene ,business ,030215 immunology - Abstract
FLT3-internal tandem duplication (FLT3-ITD) mutations are common in acute promyelocytic leukemia (APL) and render the disease more difficult to manage or cure. In this issue of Blood, Esnault et al begin to unravel how the mutation-activated FLT3 receptor impedes the effects of all-trans retinoic acid (ATRA) and how arsenic counters this.1
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- 2019
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31. Analysis of the presence of FLT3 gene mutation and association with prognostic factors in adult and pediatric acute leukemia patients
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Marley Aparecida Licínio, Maria Cláudia Santos-Silva, Arthur Schveitzer Ferreira, Thaís Cristine Marques Sincero, Ana Carolina Rabello de Moraes, Manoela Lira Reis, Pâmela Cristina Gaspar, and Graciele Burnatt
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Oncology ,medicine.medical_specialty ,CD34 ,lcsh:RS1-441 ,medicine.disease_cause ,lcsh:Pharmacy and materia medica ,03 medical and health sciences ,0302 clinical medicine ,fluids and secretions ,AML ,Internal medicine ,Precursor cell ,hemic and lymphatic diseases ,medicine ,Acute leucemia/prognostic factors ,General Pharmacology, Toxicology and Pharmaceutics ,Receptor ,Gene ,Acute leukemia ,Mutation ,business.industry ,Acute leucemia/pediatric patients ,hemic and immune systems ,Wbc count ,Acute leucemia/adults patients ,030220 oncology & carcinogenesis ,Immunology ,embryonic structures ,Flt3 gene ,business ,ALL ,FLT3-ITD/mutation ,FLT3-D835 ,030215 immunology - Abstract
When the FLT3 gene is mutated, it originates a modified receptor with structural changes, which give survival advantage and malignant hematopoietic cell proliferation. Thus, the presence of mutations in this gene is considered an unfavorable prognostic factor. A total of 85 consecutive samples of newly diagnosed untreated patients with AL were included in the study after they provided their informed consent. FLT3 gene mutations were detected by PCR. For the pediatric group, a positive correlation was observed between WBC count and the presence of FLT3-ITD in patients with AML and ALL. Furthermore, children with AML who had the FLT3-ITD mutation showed a tendency to express CD34 in blast cells. In the adult group, the AML patients with FLT3-ITD who expressed CD34 in blast cells had a tendency to worse progression. The present data indicate no association between the prognostic factors evaluated and FLT3 gene mutations in adult with AL. Yet, the presence of FLT3-ITD mutation was significantly related with WBC count in the pediatric group. These findings demonstrate that FLT3 gene mutations can be considered as independent poor prognostic factors.
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- 2017
32. FLT3 Mutation Testing in Acute Myeloid Leukemia
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David S. Viswanatha, Mrinal M. Patnaik, and Arjun Gupta
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0301 basic medicine ,Male ,Cancer Research ,Vision Disorders ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,Segmental Duplications, Genomic ,Medicine ,Humans ,Test interpretation ,Genetic Testing ,Leukapheresis ,Genetics ,business.industry ,Daunorubicin ,Cytarabine ,Headache ,Myeloid leukemia ,Middle Aged ,Leukostasis ,Leukemia, Myeloid, Acute ,030104 developmental biology ,Oncology ,fms-Like Tyrosine Kinase 3 ,Tandem Repeat Sequences ,030220 oncology & carcinogenesis ,Flt3 mutation ,Mutation (genetic algorithm) ,business ,Flt3 gene - Published
- 2017
33. Deletion and deletion/insertion mutations in the juxtamembrane domain of the FLT3 gene in adult acute myeloid leukemia
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Han-Chun DeFedericis, Matthew T. Smonskey, Sheila N.J. Sait, Petr Starostik, George Deeb, Eunice S. Wang, Meir Wetzler, and Kristin K. Deeb
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Mutant allele ,Case Report ,Biology ,medicine.disease_cause ,lcsh:RC254-282 ,fluids and secretions ,Complementary DNA ,hemic and lymphatic diseases ,medicine ,Acute myeloid leukemia (AML) ,FLT3 ,Juxtamembrane domain ,Genetics ,Acute leukemia ,Messenger RNA ,Mutation ,Deletion/insertion ,Adult Acute Myeloid Leukemia ,hemic and immune systems ,Hematology ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Oncology ,Deletion insertion ,embryonic structures ,Flt3 gene - Abstract
In contrast to FLT3 ITD mutations, in-frame deletions in the FLT3 gene have rarely been described in adult acute leukemia. We report two cases of AML with uncommon in-frame mutations in the juxtamembrane domain of the FLT3 gene: a 3-bp (c.1770_1774delCTACGinsGT; p.F590_V592delinsLF) deletion/insertion and a 12-bp (c.1780_1791delTTCAGAGAATAT; p.F594_Y597del) deletion. We verified by sequencing that the reading frame of the FLT3 gene was preserved and by cDNA analysis that the mRNA of the mutant allele was expressed in both cases. Given the recent development of FLT3 inhibitors, our findings may be of therapeutic value for AML patients harboring similar FLT3 mutations.
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- 2014
34. Metabolic strugGLS after FLT3 inhibition in AML
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Samuel J. Taylor and Ulrich Steidl
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0301 basic medicine ,Glutaminolysis ,Immunology ,Palindrome ,Myeloid leukemia ,hemic and immune systems ,Cell Biology ,Hematology ,Protein-Tyrosine Kinases ,Biology ,Biochemistry ,Article ,Leukemia, Myeloid, Acute ,03 medical and health sciences ,fluids and secretions ,030104 developmental biology ,fms-Like Tyrosine Kinase 3 ,hemic and lymphatic diseases ,embryonic structures ,Cancer research ,Humans ,CRISPR ,Flt3 gene - Abstract
FLT3 internal tandem duplication (FLT3ITD) are common mutations in acute myeloid leukemia (AML) associated with poor patient prognosis. Although new generation FLT3 tyrosine kinase inhibitors (TKI) have shown promising results, the outcome of FLT3ITD AML patients remains poor and demands the identification of novel, specific and validated therapeutic targets for this highly aggressive AML subtype. Utilizing an unbiased genome-wide CRISPR/Cas9 screen, we identify GLS, the first enzyme in glutamine metabolism, as synthetically lethal with FLT3-TKI treatment. Using complementary metabolomic and gene-expression analysis, we demonstrate that glutamine metabolism, through its ability to support both mitochondrial function and cellular redox metabolism, becomes a metabolic dependency of FLT3ITD AML, specifically unmasked by FLT3-TKI treatment. We extend these findings to AML subtypes driven by other tyrosine kinase (TK) activating mutations, and validate the role of GLS as a clinically actionable therapeutic target in both primary AML and in vivo models. Our work highlights the role of metabolic adaptations as a resistance mechanism to several TKI, and suggests glutaminolysis as a therapeutically targetable vulnerability when combined with specific TKI in FLT3ITD and other TK activating mutation driven leukemias.
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- 2018
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35. Identification of a Pharmacodynamic Biomarker for SEL24/MEN1703, a First-in-Class Dual PIM/FLT3 Kinase Inhibitor for Acute Myeloid Leukemia, and Its Implementation in the First-in-Human Study CLI24-001
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Monica Binaschi, Andrea Pellacani, Simone Baldini, Krzysztof Brzózka, Elisa Borella, Alessio Fiascarelli, Giuseppe Merlino, Daniela Bellarosa, Alessia Tagliavini, Andrea Massimiliano Tomirotti, Massimiliano Salerno, Milena Mazan, and Alessandro Bressan
- Subjects
medicine.diagnostic_test ,business.industry ,Kinase ,Immunology ,Myeloid leukemia ,Cell Biology ,Hematology ,First in human ,Biochemistry ,Flow cytometry ,Biomarker ,medicine.anatomical_structure ,hemic and lymphatic diseases ,Pharmacodynamics ,medicine ,Cancer research ,Bone marrow ,business ,Flt3 gene - Abstract
SEL24/MEN1703 is a first-in-class, orally available, dual PIM/FLT3 kinase inhibitor currently investigated in patients with Acute Myeloid Leukemia (AML) in the first-in-human study CLI24-001 (NCT03008187). PIM and FLT3 kinases are considered to play an important role in AML and are inhibited by SEL24/MEN1703. Moreover, there is evidence that inhibition of PIM kinases might contribute to overcoming acquired resistance induced by approved FLT3 inhibitors1. In AML, different signal transducers in the FLT3 pathway are substrates of kinases. Therefore, their phosphorylation levels might be modulated by kinase inhibitors and may be exploited as a potential pharmacodynamic biomarker in clinical development. In particular, phosphorylation of S6, 4E-BP1, and STAT5 is regulated by both FLT3 and PIM1/2. Thus, the objective of this investigation was to identify the most promising pharmacodynamic biomarker/s for implementation in the clinical trials of SEL24/MEN1703. Initially, we assessed the in vitro cytotoxic effect of SEL24/MEN1703 in a panel of 26 AML cell lines harboring different genetic mutations, to identify suitable cell lines for subsequent experiments. In the selected panel of AML cell lines, SEL24/MEN1703 resulted in the inhibition of phosphorylation of S6, 4-EBP1 and STAT5 as measured by immunoblotting. Notably, the reduction in phosphorylated S6 (pS6) in response to SEL24/MEN1703 was particularly evident. Since SEL24/MEN1703 displays a broad cytotoxic activity in AML cell lines, we clustered sensitive and resistant cell lines considering 0.5 μM as the IC50 cut-off value. Then, we investigated the relationship between SEL24/MEN1703 cytotoxic activity in AML cell lines and the inhibition of the above mentioned phosphorylated proteins in a 24-hour cytotoxic assay, showing a correlation between IC50 and the reduction of pS6 (Pearson correlation coefficient: -0.6905, R2= 0.477). To further confirm the in vitro data, SEL24/MEN1703 ability to modulate phosphoproteins was assessed also in xenograft mice bearing MOLM-16 cell line. The phosphorylation status of S6, 4E-BP1 and STAT5 was analyzed by immunoblot in tumor tissues from mice treated at 25 mg/kg of SEL24/MEN1703 at baseline and at 4, 8, and 16 hours after treatment. Results showed that also in vivo, SEL24/MEN1703 administration resulted in a decrease of pS6, with maximum reduction in this parameter observed 4 hours after the administration of the investigational compound. Based on these results, pS6 was identified as the pharmacodynamic biomarker to be implemented in the CLI24-001 clinical trial. Among different available methods, flow cytometry was selected as the preferred platform to analyze patient samples, because of its ability to provide quantitative assessment of cellular events and pharmacodynamic evaluation in a selected, relevant cell subpopulation, such as the AML blast cells. The assessment of pS6 in the clinical trial is planned both at baseline and at cycle 1 day 14 for whole blood and bone marrow. In addition, pS6 levels will be measured in whole blood at additional time points during treatment cycles. We have implemented the measurement of pS6 in the CLI24-001 trial, and pS6 levels as well as their relationship with the main pharmacokinetic parameters in patients treated with SEL24/MEN703 at 100 and 125 mg will be presented. 1Green A.S. et al., Pim kinases modulate resistance to FLT3 tyrosine kinase inhibitors in FLT3-ITD acute myeloid leukemia, Sci Adv, 2015 Disclosures Tomirotti: Menarini Ricerche S.p.A.: Employment. Merlino:Menarini Ricerche S.p.A.: Employment. Fiascarelli:Menarini Ricerche S.p.A.: Employment. Baldini:Menarini Ricerche S.p.A.: Employment. Tagliavini:Menarini Ricerche S.p.A: Employment. Borella:Menarini Ricerche S.p.A.: Employment. Mazan:Selvita S.A.: Employment. Brzózka:Selvita S.A.: Employment, Equity Ownership, Membership on an entity's Board of Directors or advisory committees. Bressan:Menarini Ricerche S.p.A.: Employment. Pellacani:Menarini Ricerche S.p.A.: Employment; Amgen: Equity Ownership. Salerno:Menarini Ricerche S.p.A.: Employment. Binaschi:Menarini Ricerche S.p.A.: Employment. Bellarosa:Menarini Ricerche S.p.A.: Employment.
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- 2019
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36. Activity of Multiple Targetable Therapies in FLT3-Mutated (mu) Acute Myeloid Leukemia (AML) Patients (pts) with Concurrent Isocitrate Dehydrogenase Mutation (IDHm)
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Naval Daver, Farhad Ravandi, Hagop M. Kantarjian, Koji Sasaki, Jorge E. Cortes, Nicholas J. Short, Guillermo Garcia-Manero, Courtney D. DiNardo, Sherry Pierce, Mansour Alfayez, Elias Jabbour, Tapan M. Kadia, Naveen Pemmaraju, Marina Konopleva, Gautam Borthakur, Lucia Masarova, and Musa Yilmaz
- Subjects
Mutation ,business.industry ,Immunology ,Myeloid leukemia ,Cell Biology ,Hematology ,medicine.disease_cause ,medicine.disease ,Biochemistry ,Leukemia ,Isocitrate dehydrogenase ,Antigen ,Cytarabine ,Cancer research ,Medicine ,Flt3 gene ,business ,medicine.drug - Abstract
Background: FLT3-mutated (mu) AML pts have poor outcomes. IDH1mutated (IDH1m) and IDH2m co-occur with FLT3 mutations in 15-27% and 8-30% of AML, respectively (Boddu P, et al. Leukemia 2017; 31:2526-2529). FLT3-ITD is a strong risk factor for relapse and since multiple FLT3 inhibitors (FLT3i's) are available, it is important to further determine how the efficacy of these targeted is impacted by concurrent mutation/s. Methods: We reviewed FLT3-mu AML pts with concurrent IDHm's between Jan 2011-Dec 2018 who had received at least one first or second generation FLT3-inhibitor (FLT3i)-based therapy in frontline and/or relapsed/refractory (R/R) setting. We are not discussing IDHi based therapies in double mutant pts this abstract. Mutation testing was performed using a NGS-based analysis for the detection of somatic mutations in the coding sequences of 28 or 81 genes on DNA extracted from BMA, as previously described (33). We analyzed the characteristics of these pts, responses to therapy, and outcomes. Results: Eighty two FLT3, IDH 'double mutated' AML pts were identified. One pt had FLT3-TKD mu and IDH1m, and 2 pts had FLT3-TKD mu and IDH2m and were excluded. We focus here on the 79 pts with concurrent FLT3-ITD mu and IDH1m or IDH2m. 30 pts had concurrent FLT3/IDH1m: 19 (63%) in frontline and 11 (37%) in the R/R setting. 49 had concurrent FLT3/IDH2m: 31 (63%) in frontline and 18 (37%) in the R/R setting. The median follow-up was 8.3 months [1.2 - 115] and 10.5 months [0.3 - 57.8] months for pts with concurrent FLT3/IDH1m and FLT3/IDH2m, respectively. The median number of prior therapies was 2 [1 - 8] in both R/R settings. The most frequent mutations were IR132H (77%) and IR140Q (98%) in pts with FLT3/IDH1m and FLT3/IDH2m, respectively. Patient characteristics are shown in Table 1. As expected, the incidence of adverse cytogenetics in FLT3/IDH mutated pts was low (7/79; 9%). The most common co-occurring mutations in FLT3/IDH1 pts were NPM1 (66%) and DNMT3A (43%). Similarly in FLT3/IDH2: NPM1 (53%) and DNMT3A (31%). FLT3i's were given as a single agent or in combination with cytotoxic chemotherapy (CCT) or low intensity therapy (LIT) (hypomethylating agents and low-dose cytarabine) in the frontline or R/R setting (Table 2). CR/CRi rate was highest with CCR with FLT3i, with 83% and 78% of frontline and R/R FLT3/IDH pts achieving CR/CRi with this approach. Among pts who could not receive CCT based therapies, LIT with FLT3i showed encouraging activity with CR/CRi rates of 47% and 40% in frontline and R/R FLT3/IDH pts, respectively. LIT alone was not very effective with CR/CRi rates of 0 and 33% in frontline and R/R FLT3/IDH pts, although numbers are small. Similarly, single agent FLT3 showed modest activity with CR/CRi in 16% of the R/R FLT3/IDH pts. As expected FLT3/IDH2 pts had improved overall survival (OS) and event free survival (EFS) compared with FLT3/IDH1 pts. The median OS was 11.2 and 2.88 in frontline and R/R FLT3/IDH1 pts, respectively. The median OS was 20.6 and 10.3 in frontline and R/R FLT3/IDH2 pts, respectively. The median EFS was 4.98 and 4.27 in frontline FLT3/IDH1 pts who received CCT+FLT3i and LIT+FLT3i, respectively (p=0.10). The median EFS was 14.2 and 8.2 in frontline FLT3/IDH2 pts who received CCT+FLT3i and LIT+FLT3i, respectively (p=0.09). Conclusion:FLT3/IDH2 pts have better EFS and OS than FLT3/IDH1 pts in frontline and R/R setting with FLT3i in combination with CCT or LIT. CCT in combination with FLT3i appears to be optimal therapy for FLT3/IDH co-mutated pts with CR/CRi rates of 83% in frontline, and 78% in R/R setting. In pts unable to tolerate CCT a combination of LIT with FLT3i is a reasonable approach yielding CR/CRi rates of 40-45% in frontline and R/R FLT3/IDH pts. LIT alone and FLT3-inhibitor alone demonstrated lower activity with CR/CRi rates of 14-16% in double mutant pts. Disclosures Kadia: Pfizer: Membership on an entity's Board of Directors or advisory committees, Research Funding; BMS: Research Funding; Amgen: Membership on an entity's Board of Directors or advisory committees, Research Funding; Jazz: Membership on an entity's Board of Directors or advisory committees, Research Funding; Celgene: Research Funding; Bioline RX: Research Funding; Genentech: Membership on an entity's Board of Directors or advisory committees; Pharmacyclics: Membership on an entity's Board of Directors or advisory committees; Takeda: Membership on an entity's Board of Directors or advisory committees; AbbVie: Consultancy, Research Funding. Konopleva:Astra Zeneca: Research Funding; Reata Pharmaceuticals: Equity Ownership, Patents & Royalties; Ablynx: Research Funding; Ascentage: Research Funding; Kisoji: Consultancy, Honoraria; Genentech: Honoraria, Research Funding; Amgen: Consultancy, Honoraria; F. Hoffman La-Roche: Consultancy, Honoraria, Research Funding; AbbVie: Consultancy, Honoraria, Research Funding; Cellectis: Research Funding; Eli Lilly: Research Funding; Stemline Therapeutics: Consultancy, Honoraria, Research Funding; Forty-Seven: Consultancy, Honoraria; Calithera: Research Funding; Agios: Research Funding. Ravandi:Macrogenix: Consultancy, Research Funding; Xencor: Consultancy, Research Funding; Amgen: Honoraria, Membership on an entity's Board of Directors or advisory committees, Research Funding; Menarini Ricerche: Research Funding; Cyclacel LTD: Research Funding; Selvita: Research Funding. Cortes:Novartis: Consultancy, Honoraria, Research Funding; Takeda: Consultancy, Research Funding; Jazz Pharmaceuticals: Consultancy, Research Funding; BiolineRx: Consultancy; Forma Therapeutics: Consultancy, Honoraria, Research Funding; Immunogen: Consultancy, Honoraria, Research Funding; Daiichi Sankyo: Consultancy, Honoraria, Research Funding; Bristol-Myers Squibb: Consultancy, Research Funding; Biopath Holdings: Consultancy, Honoraria; Pfizer: Consultancy, Honoraria, Research Funding; Astellas Pharma: Consultancy, Honoraria, Research Funding; Merus: Consultancy, Honoraria, Research Funding; Sun Pharma: Research Funding. Jabbour:Pfizer: Consultancy, Research Funding; AbbVie: Consultancy, Research Funding; Amgen: Consultancy, Research Funding; Takeda: Consultancy, Research Funding; BMS: Consultancy, Research Funding; Adaptive: Consultancy, Research Funding; Cyclacel LTD: Research Funding. Garcia-Manero:Onconova: Research Funding; H3 Biomedicine: Research Funding; Merck: Research Funding; Amphivena: Consultancy, Research Funding; Helsinn: Research Funding; Novartis: Research Funding; AbbVie: Research Funding; Celgene: Consultancy, Research Funding; Astex: Consultancy, Research Funding. Short:Takeda Oncology: Consultancy, Research Funding; AstraZeneca: Consultancy; Amgen: Honoraria. Sasaki:Pfizer: Consultancy; Otsuka: Honoraria. Pemmaraju:novartis: Consultancy, Research Funding; plexxikon: Research Funding; Daiichi-Sankyo: Research Funding; abbvie: Consultancy, Honoraria, Research Funding; sagerstrong: Research Funding; affymetrix: Research Funding; celgene: Consultancy, Honoraria; cellectis: Research Funding; Stemline Therapeutics: Consultancy, Honoraria, Research Funding; samus: Research Funding; incyte: Consultancy, Research Funding; mustangbio: Consultancy, Research Funding. Borthakur:Argenx: Membership on an entity's Board of Directors or advisory committees; FTC Therapeutics: Membership on an entity's Board of Directors or advisory committees; Tetralogic Pharmaceuticals: Research Funding; Janssen: Research Funding; NKarta: Consultancy; Bayer Healthcare AG: Research Funding; Novartis: Research Funding; Incyte: Research Funding; Agensys: Research Funding; Merck: Research Funding; GSK: Research Funding; Arvinas: Research Funding; Xbiotech USA: Research Funding; Cyclacel: Research Funding; BioTheryX: Membership on an entity's Board of Directors or advisory committees; Strategia Therapeutics: Research Funding; BMS: Research Funding; AstraZeneca: Research Funding; PTC Therapeutics: Consultancy; Cantargia AB: Research Funding; BioLine Rx: Consultancy, Membership on an entity's Board of Directors or advisory committees, Research Funding; Eisai: Research Funding; Oncoceutics: Research Funding; Eli Lilly and Co.: Research Funding; Oncoceutics, Inc.: Research Funding; Polaris: Research Funding; AbbVie: Research Funding. Kantarjian:Actinium: Honoraria, Membership on an entity's Board of Directors or advisory committees; AbbVie: Honoraria, Research Funding; Daiichi-Sankyo: Research Funding; Amgen: Honoraria, Research Funding; BMS: Research Funding; Cyclacel: Research Funding; Takeda: Honoraria; Immunogen: Research Funding; Ariad: Research Funding; Novartis: Research Funding; Agios: Honoraria, Research Funding; Jazz Pharma: Research Funding; Astex: Research Funding; Pfizer: Honoraria, Research Funding. DiNardo:celgene: Consultancy, Honoraria; jazz: Honoraria; syros: Honoraria; daiichi sankyo: Honoraria; agios: Consultancy, Honoraria; medimmune: Honoraria; notable labs: Membership on an entity's Board of Directors or advisory committees; abbvie: Consultancy, Honoraria. Daver:Celgene: Consultancy; Glycomimetics: Research Funding; NOHLA: Research Funding; BMS: Consultancy, Research Funding; Sunesis: Consultancy, Research Funding; Incyte: Consultancy, Research Funding; Immunogen: Consultancy, Research Funding; Otsuka: Consultancy; Karyopharm: Consultancy, Research Funding; Jazz: Consultancy; Forty-Seven: Consultancy; Novartis: Consultancy, Research Funding; Agios: Consultancy; Abbvie: Consultancy, Research Funding; Genentech: Consultancy, Research Funding; Pfizer: Consultancy, Research Funding; Servier: Research Funding; Hanmi Pharm Co., Ltd.: Research Funding; Daiichi Sankyo: Consultancy, Research Funding; Astellas: Consultancy.
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37. Loss of Heterozygosity of FLT3-ITD Is Common in Acute Myeloid Leukemia and May be a More Consistent Prognostic Marker Than FLT3-ITD Allele Frequency
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Eric Allan Severson, Prasanth Reddy, Jeffrey S. Ross, Shakti H. Ramkissoon, Jo-Anne Vergilio, Brian M. Alexander, Ethan Sokol, Amanda Hemmerich, Claire Edgerly, Nicholas Britt, Pratheesh Sathyan, Russell Madison, Julia A. Elvin, Daniel Duncan, Siraj M. Ali, and Richard S.P. Huang
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Immunology ,Aneuploidy ,Myeloid leukemia ,Cell Biology ,Hematology ,Biology ,Impedance threshold device ,medicine.disease ,Biochemistry ,Gene expression profiling ,Loss of heterozygosity ,medicine ,Cancer research ,Flt3 gene ,Allele frequency ,Flt3 itd - Abstract
BACKGROUND: FLT3 alterations in Acute Myeloid Leukemia (AML) occur as either point mutations in the tyrosine kinase domain (TKD) or internal tandem duplications (ITD), both of which result in constitutive activation of FLT3; however, only FLT3-ITD has prognostic value. Per NCCN guidelines, when NPM and FLT3-ITD alterations co-occur, an allele frequency ≥ 0.5 for FLT3-ITD (FLT3-ITDhigh) confers an intermediate prognosis, while allele frequencies < 0.5 (FLT3-ITDlow) confers a favorable prognosis. For allele frequency to be ≥ 0.5, loss of heterozygosity (LOH) or copy number gains at the FLT3 locus are required. In this study, we examined a large cohort of FLT3 mutated AML samples to study LOH at the FLT3 locus. DESIGN: During routine clinical care, 2129 AML samples were evaluated by comprehensive genomic profiling (CGP) for 406 genes via DNAseq for all classes of genomic alterations and 265 genes via RNAseq for rearrangements, using a hybrid-capture next generation sequencing assay (FoundationOne®Heme). Of these samples, 1379 met analytic specifications required for LOH analysis. LOH analysis was performed by first generating copy number models from exon and SNP log ratio and minor allele fractions (maf). LOH was then determined using the modeled copy number, maf, and tumor purity. Samples with low aneuploidy were reviewed manually. RESULTS: The median age of the overall cohort was 60 y (range LOH analysis was performed for 236 AML samples with a FLT3 alteration and 224 randomly selected wild-type FLT3 AML samples as controls. Samples with a FLT3 alteration had a significantly higher rate of LOH compared to the control samples (34/236 (14.4%) versus 2/224 (0.9%), p = 9.0x10-9). Samples with a FLT3-ITD were under significantly greater LOH than samples with a point mutation (33/171 (19.3%) versus 4/115 (3.5%), p = 2.8x10-5). Samples with only a point mutation rarely had LOH (1/94, 1.0%), not significantly different than FLT3 wild-type controls. Copy number analysis revealed that FLT3-altered samples had a rate of FLT3 copy number gains not significantly different than control samples (10/236 (4.2%) versus 7/224 (3.1%)). The allele frequency was significantly higher for FLT3-ITD alterations compared to FLT3-TKD alterations (median 0.11 versus 0.24, p < 0.001), and FLT3-ITD alterations under LOH had a higher allele frequency than those not under LOH (median 0.35 versus 0.24, p< 0.01). Only 1/115 FLT3-TKD alterations had an allele frequency > 0.5 versus 7/171 of the FLT3-ITD alterations. Five (of 7) FLT3-ITDhigh samples were under LOH and the remaining 2 samples had FLT3 copy number gains. FLT3-ITD mutated AML has co-occurring genomic alterations of clinical significance; however, with this sample size there were no statistically significant differences in the frequencies between samples with and without LOH at the FLT3 locus (NPM1: 64% vs 43%, DNMT3A: 48% vs 37%, WT1: 36% vs 25%, RUNX1: 12% vs 17%, NRAS: 3% vs 16%). CONCLUSIONS: In AML, the FLT3 locus has increased LOH when a FLT3-ITD is present, compared to FLT3 wild-type controls and samples with FLT3-TKD alterations. Copy number alterations in FLT3 are not different in FLT3-altered vs FLT3 wild type AML. Allele frequencies were higher for FLT3-ITDs compared to FLT3-TKDs and were highest for FLT3-ITDs under LOH. An emerging negative prognostic indicator in AML is FLT3-ITDhigh. Determination of FLT3-ITDhigh status requires high tumor purity, copy number gains, and/or LOH. The requirement of high tumor purity makes FLT3-ITDhigh status dependent on factors other than tumor biology, such as tumor sampling. In our dataset, 33 (19%) FLT3-ITD samples were under LOH but only 5 (4%) were FLT3-ITDhigh. LOH of FLT3-ITDs has also been associated with worse prognosis in AML and further studies are warranted to determine if allele frequency or absence of wild-type FLT3 drives these prognostic correlations. FLT3-ITD LOH is more common than FLT3-ITDhigh and could provide more accurate, sample independent risk stratification for patients with FLT3-ITD+ AML. Disclosures Severson: F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment. Sokol:F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment. Madison:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Duncan:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Hemmerich:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Edgerly:Foundation Medicine, Inc: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Huang:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Britt:Foundation Medicine, Inc: Employment. Vergilio:F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment. Elvin:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Reddy:Foundation Medicine, Inc: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Sathyan:F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment. Alexander:F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment. Ross:Foundation Medicine, Inc.: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Ali:Foundation Medicine, Inc: Employment; F. Hoffman La Roche, Ltd.: Equity Ownership. Ramkissoon:F. Hoffman La Roche, Ltd.: Equity Ownership; Foundation Medicine, Inc.: Employment.
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38. Next-Generation RNA Sequencing-Based Analysis Identifies a Novel Set of Prognostic Micrornas (miRs) in Cytogenetically Normal Acute Myeloid Leukemia (CN-AML)
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Richard Stone, Ann-Kathrin Eisfeld, Allison E. Walker, Andrew J. Carroll, Christopher J. Walker, Jessica Kohlschmidt, Kellie J. Archer, Bayard L. Powell, Deedra Nicolet, Dimitrios Papaioannou, John C. Byrd, Krzysztof Mrózek, Jonathan E. Kolitz, Ramiro Garzon, Clara D. Bloomfield, Geoffrey L. Uy, and Marius Bill
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Immunology ,Treatment outcome ,Complete remission ,RNA ,Cell Biology ,Hematology ,Biology ,Biochemistry ,CCAAT/enhancer binding protein alpha ,medicine.anatomical_structure ,microRNA ,Cytogenetically normal acute myeloid leukemia ,medicine ,Cancer research ,Bone marrow ,Flt3 gene - Abstract
Background: Aberrant expression levels of several miRs have been reported to independently associate with outcome of patients (pts) with CN-AML. In these reports, miR expression was profiled using microarray assays, which interrogate a selected subset of miRs. The advent of next-generation sequencing (NGS) has allowed unbiased measurement of miR expression, but, to our knowledge, NGS has not been used to identify miRs associated with prognosis of AML pts. Here, we analyze small RNA sequencing (smRNA-seq) data from a large cohort of younger adults with CN-AML, for whom outcome data were available, with the goal to identify new prognostic miRs. Methods: We performed smRNA-seq in 281 younger adults (aged 18-59 y) with de novo CN-AML. Cytogenetic analyses were performed in Cancer and Leukemia Group B (CALGB)/Alliance institutional laboratories using standard banding techniques; mutational analyses were done centrally using a targeted DNA sequencing platform. All pts were treated on frontline CALGB/Alliance protocols. Results: We first evaluated which miRs associated with overall survival (OS) in univariable analysis; we detected 9 such miRs. We then used a machine-learning approach, namely random forests, to identify miRs whose concomitant expression could generate an effective outcome predictor in CN-AML. To account for the effect of co-existing prognostic gene mutations, we included the European LeukemiaNet (ELN) risk group status in the random forest analyses. A total of 8 prognostic miRs were identified, 4 of which were also found to be prognostic in univariable analysis (underlined below), thus bringing the total number of unique prognostic miRs to 13: miR-511, miR-1193, miR-155, miR-4517, miR-3681, miR-2355, miR-628, miR-1266, miR-6715a, miR-1180, miR-6715b, miR-132, miR-146b. We used partitioning around medoids to divide our pts into clusters, based on the combined expression levels of the 13 prognostic miRs. Two such clusters were identified: cluster 1 comprised 173 pts and cluster 2 contained 108 pts. Regarding pretreatment and molecular features, pts in cluster 1 had lower percent of bone marrow blasts (P=.04), and had more frequently biallelic CEBPA mutations (P Conclusion: Unbiased profiling of miRs using smRNA-seq has identified a novel set of 13 miRs with prognostic significance in CN-AML. MiR expression-based cluster status independently associates with clinical outcome of CN-AML pts. Our preliminary in vitro experiments have shown that miR-511, whose association with prognosis was the strongest among the newly identified prognostic miRs, is functionally relevant in AML. Disclosures Uy: Astellas: Consultancy; Pfizer: Consultancy; Curis: Consultancy; GlycoMimetics: Consultancy. Powell:Rafael Pharmaceuticals: Consultancy, Research Funding; Novartis: Consultancy, Speakers Bureau; Jazz Pharmaceuticals: Consultancy, Research Funding, Speakers Bureau; Pfizer: Consultancy, Research Funding; Janssen: Research Funding. Kolitz:Astellas: Research Funding; Boeringer-Ingelheim: Research Funding; Roche: Research Funding. Byrd:Acerta: Research Funding; TG Therapeutics: Other: Travel Expenses, Research Funding, Speakers Bureau; Genentech: Research Funding; Janssen: Consultancy, Other: Travel Expenses, Research Funding, Speakers Bureau; Ohio State University: Patents & Royalties: OSU-2S; Genentech: Research Funding; Novartis: Other: Travel Expenses, Speakers Bureau; BeiGene: Research Funding; TG Therapeutics: Other: Travel Expenses, Research Funding, Speakers Bureau; Novartis: Other: Travel Expenses, Speakers Bureau; Pharmacyclics LLC, an AbbVie Company: Other: Travel Expenses, Research Funding, Speakers Bureau; Acerta: Research Funding; Ohio State University: Patents & Royalties: OSU-2S; Ohio State University: Patents & Royalties: OSU-2S; Gilead: Other: Travel Expenses, Research Funding, Speakers Bureau; Genentech: Research Funding; Acerta: Research Funding; BeiGene: Research Funding; Gilead: Other: Travel Expenses, Research Funding, Speakers Bureau; Janssen: Consultancy, Other: Travel Expenses, Research Funding, Speakers Bureau; Pharmacyclics LLC, an AbbVie Company: Other: Travel Expenses, Research Funding, Speakers Bureau.
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39. Towards Understanding & Uncovering New Key Players in T-Cell Development upon Aging
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Hartmut Geiger, Kalpana Nattamai, Hanane Boukarabila, and Medhanie A. Mulaw
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Cognitive science ,Transplantation ,medicine.anatomical_structure ,T cell ,Immunology ,medicine ,Key (cryptography) ,Cell Biology ,Hematology ,Flt3 gene ,Psychology ,Biochemistry ,Signal pathway - Abstract
Aging-associated immune remodeling (AAIR) leads to an impaired ability to respond to vaccination and combat infections, and is due to many factors acting in concert. Several studies have linked the T-cell decline that occurs with age to thymic involution. However, there is novel and mounting evidence that also aged lymphoid-primed multipotent progenitors (LMPPs) are immune system intrinsic players in AAIR. However, very little is known on molecular and cellular mechanisms by which aging LMPPs could drive this AAIR phenomenon. Deciphering the underlying mechanisms is of crucial importance for developing new therapies to attenuate AAIR. Here, we present new data demonstrating the dysregulated pathways associated with aged LMPPs and the cellular changes in early thymic differentiation events in driving AAIR. To assess the T-lineage potential of aged LMPPs, we performed single cells ex-vivo OP9D assays using LMPPs (Lin-cKit+Sca1+CD34-Flt3hi) from aged (18-20 month-old) and young (8-10 week-old) C57BL/6 animals as controls. The frequencies of T-cell lineage potential in aged LMPPs and young LMPPs at the single cell level were very similar. This result was also validated in vivo by transplantation assays where 5000 aged or young LMPPs were injected into sub-lethally irradiated young recipients followed by T-cell lineage (CD4+ & CD8+) analysis in the peripheral blood (PB) at 4 weeks post transplantation (Mean; Y:12,75 vs A:16:23 % of total, p=0.46). However, aged LMPPs were associated with a dramatic disadvantage of PB T-cells at 4 weeks post injections (Mean; Y:9 vs A:2.3 % of total, p We also performed RNA-Seq analyses on LMPPs from young and aged mice. Unsupervised hierarchical clustering of differentially expressed genes between young and aged LMPPs highlighted a clear dysregulation of only a few pathways that are involved in T-cell development such as Notch signaling. We next correlated our RNA-Seq data with other immunological signatures in attempt to look for more T-cell specific key factors that are differentially expressed between young and aged LMPPs. Importantly, the results show that the data from our RNA-Seq correlated with more than 400 immunological signatures among which 25 were most highly correlated. Interestingly, this correlation has allowed us to curate a list of the top 30 differentially expressed genes between young and aged LMPPs including T-cell specific transcription factors such as Satb1 and Foxo1. Altogether, our findings reveal that the T-cell immune decline that occurs with age is already imprinted in LMPPs within the bone marrow and translates into a dysregulation of signaling pathways that are directly related to T-cell development. Targeting these pathways could open up new perspectives in attenuating AAIR. Disclosures No relevant conflicts of interest to declare.
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40. Molecular Characterization of Leukemia Evolving from Paroxysmal Nocturnal Hemoglobinuria
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Vera Adema, Hetty E. Carraway, Valeria Visconte, Ashwin Kishtagari, Sunisa Kongkiatkamon, Jaroslaw P. Maciejewski, Jibran Durrani, Hassan Awada, Shafia Rahman, Mikkael A. Sekeres, and Cassandra M Kerr
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ASXL1 gene ,business.industry ,Immunology ,Myeloproliferative disease ,Signs and symptoms ,Cell Biology ,Hematology ,Srsf2 gene ,medicine.disease ,Biochemistry ,Leukemia ,hemic and lymphatic diseases ,medicine ,Paroxysmal nocturnal hemoglobinuria ,Myelofibrosis ,Flt3 gene ,business - Abstract
Myeloid malignancies can evolve from prior hematologic disorders, most commonly AML evolving from MDS. AA and PNH are not malignant conditions but they can evolve to myeloid malignancies with a lower frequency compared to MDS and other myeloid and myeloproliferative diseases. PNH can evolve to myeloid disorders with an incidence rate of 4-10%. Here we aim to revisit the subject of malignant evolution of PNH to myeloid disorders by analyzing the molecular background of PNH using modern NGS technologies. Clinical characteristics, demographics and mutational profiles of patients were collected at The Cleveland Clinic Foundation. In total a cohort of 243 patients evaluated for hemolytic PNH (n=83), AA (39) and AA/PNH (n=121) followed for a period of 22 years was evaluated. Inclusion criteria were: complete flow cytometric panels of PNH cells, patients without antecedent AA (pPNH, 45), patients evolving from AA with PNH clone >20% (sPNH, 38), karyotype (at diagnosis of PNH and transformation), clinical parameters including time to malignant progression, and molecular characterization resulting from NGS performed using various library preparation systems (TruSeq, TruSight, Nextera), comparison of molecular mutations with control cohorts (AA, 160; MDS, 835). The incidence rate of myeloid disorders in our PNH cohort was 3% (7/243). Among hemolytic PNH patients, 7 patients progressed to AML (n=1), MDS (n=5) or myelofibrosis (n=1). Median age was 48 yr (range, 24-80); M/F, 5/2. Median PNH clone size was 71% (range, 29-99). Three progressors were in the pPNH and 4 in the sPNH group. Time to malignant diagnosis was A total of 45 somatic mutations equally distributed in the 2 groups (pPNH, 22; sPNH, 23) and with similar VAFAVG (pPNH vs. sPNH 38% vs. 33%) were found. PNH showed a higher proportion of individuals with mutations compared to AA/PNH+AA (42 vs. 22% of cases with ≥1 mutation; P=.002) with a median VAF percentage significantly higher in PNH vs. AA/PNH+AA (40 vs. 19%; P55), 17% were equivocal (possibly hits biclonal with a VAFSUM between 45-55), while 13% were more likely a result of clonal chimerism (hits present in different clones; VAFSUM Clonal evolution of hemolytic PNH to MDS/AML is rare, but still occurs and it is accompanied by mutations in typical myeloid genes (BCOR, NPM1, TET2, U2AF1) which in permissive circumstances are capable to change the cell's fate favoring clonal evolution. Our results suggest that most PNH cases can carry additional mutations in the same clone and these mutations can be secondary hits, with PIGA mutations being the founder lesions. However even when mutations in myeloid genes are dominant, the phenotype of the patients is inferred by PIGA. This observation supports the nature of PNH as a monogenic disease with clinical manifestations resulting by PIGA mutations rather than by myeloid genes. Disclosures Sekeres: Syros: Membership on an entity's Board of Directors or advisory committees; Millenium: Membership on an entity's Board of Directors or advisory committees; Celgene: Membership on an entity's Board of Directors or advisory committees. Maciejewski:Novartis: Consultancy; Alexion: Consultancy.
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41. The Ever-Changing Therapeutic Landscape of AML: A Real World Experience of Novel Therapies on Outcomes
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Sarah Sadek, Mark G. Faber, Amanda Przespolewski, Jeffrey Baron, Eunice S. Wang, James E. Thompson, Swapna Thota, Abhay Singh, and Elizabeth A. Griffiths
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medicine.medical_specialty ,Karnofsky Performance Status ,business.industry ,Immunology ,Gilteritinib ,Cell Biology ,Hematology ,Biochemistry ,Transplantation ,medicine ,Drug approval ,Intensive care medicine ,business ,Flt3 gene - Abstract
BACKGROUND: After many decades of stagnation, several promising novel therapies have recently been approved for the management of patients (pts) with Acute Myeloid Leukemia (AML). Many of these target pts in specific clinical and molecular subsets such as midostaurin/gilteritinib for FLT3-mutated AML, liposomal daunorubicin-cytarabine for secondary AML, and fractionated gemtuzumab ozogamicin (GO) for good risk AML. To address the dismal outlook for elderly AML patients, we now have venetoclax or glasdegib combinations. Single agent FLT3 inhibitors (resulting in ~4 m improvement in overall survival (OS)) and IDH inhibitors (response rate 40%, doubled OS in responders) have shown to be superior to traditional approaches in the relapsed setting. Although these agents are exciting, a majority of pts with AML present with intermediate and high-risk disease and only a small subset will have actionable mutations. In order to determine the impact of these newer therapies on outcome for our pts, we investigated AML outcomes for pts diagnosed and treated since 2017 and compared these with survival for similar pts treated in the prior two years (y). METHODS: We performed a retrospective chart review to identify newly diagnosed pts treated with chemotherapy over a 2y period (2015-17) prior to the first FDA approval of Midostaurin in April, 2017 (old AML era or group 1) and the 2y since approval (2017-19; new AML era or group 2). We reviewed charts of 138 AML pts meeting these criteria at our institution: 79 in group 1 and 59 in group 2. Demographics, disease-specific variables, as well as outcomes of interest (overall survival (OS), overall response rate (CR/CRi)) were collected on an IRB-approved protocol. Responses were defined according to the 2003 International Working Group (IWG) criteria. Demographics, baseline characteristics, and treatment responses were analyzed using descriptive statistics. Overall survival was estimated utilizing Kaplan-Meier (KM) survival analysis. RESULTS: Clinical characteristics were comparable in both groups. Median age was 65y with slight differences in gender distribution (Table 1). ELN risk categories (Döhner, Blood. 2017) across the groups were similarly distributed; a majority of pts had intermediate and adverse risk characteristics. As expected, more pts received newer therapies in group 2. 6 pts (7.6%) in group 1 received new drugs (as part of clinical trials), while 31 (52%) received newer therapies in group 2. Newer therapies were mostly GO (28%), midostaurin (11%) and venetoclax (11%) with lesser percentages of the more specific targeted therapies. Median follow-up was 10m for group 1 and 8m for group 2. Median OS was 13m for group 1 and 20m for group 2, but the difference was not statistically significant (p=0.29) [Figure 1]. OS was significantly better in the subgroup of older AML pts (age ≥ 60y); median OS was 7m vs. 11m in groups 1 and 2 respectively (p=0.01).Rates of CR from induction therapy were comparable in both groups (68% in group 1 versus 65% in group 2). A larger number of pts (especially older pts) in group 2 went on to allogeneic bone marrow transplant (allo-HCT). This was perhaps due to increased recognition of performance status over age in selection of pts for allo-HCT and increased utilization of reduced intensity and non-myeloablative conditioning regimens. CONCLUSIONS: Our results indicate a positive impact on survival for pts diagnosed in the era of novel therapies in a real world setting, specifically for pts presenting at older ages. A larger cohort analysis to further evaluate these findings is currently underway. The expansion of the therapeutic armamentarium as well as expanded transplant options is encouraging and offers new hope for pts diagnosed with AML Disclosures Griffiths: Onconova Therapeutics: Other: PI on a clinical trial; Partner Therapeutics: Consultancy; Astex Phramaceuticals/Otsuka Pharmaceuticals: Consultancy, Research Funding; Appelis Pharmaceuticals: Other: PI on a clinical trial; Onconova Therapeutics: Other: PI on a clinical trial; Appelis Pharmaceuticals: Other: PI on a clinical trial; Boston Scientific: Consultancy; Genentech, Inc.: Research Funding; Genentech, Inc.: Research Funding; New Link Genetics: Consultancy; Astex Phramaceuticals/Otsuka Pharmaceuticals: Consultancy, Research Funding; Celgene, Inc: Consultancy, Research Funding; Celgene, Inc: Consultancy, Research Funding; Abbvie, Inc.: Consultancy, PI on a clinical trial; Abbvie, Inc.: Consultancy; New Link Genetics: Consultancy; Persimmune: Consultancy; Persimmune: Consultancy; Boston Scientific: Consultancy; Novartis Inc.: Consultancy; Partner Therapeutics: Consultancy; Novartis Inc.: Consultancy. Wang:Kite: Other: Advisory role; Jazz: Other: Advisory role; Amgen: Other: Advisory role; Agios: Other: Advisory role; Abbvie: Other: Advisory role; Daiichi: Other: Advisory role; Stemline: Other: Advisory role, Speakers Bureau; Pfizer: Other: Advisory role, Speakers Bureau; celyad: Other: Advisory role; Astellas: Other: Advisory role, Speakers Bureau. Thota:Incyte, Inc.: Speakers Bureau.
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- 2019
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42. Overcoming Adaptive Therapy Resistance in AML By Targeting Immune Response Pathways
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Kathleen Hueneman, Morgan M. Walker, Patrick Sutter, Xiaohu Zhang, Xin Xu, Mark Wunderlich, Donald D. Lorimer, Jan Abendroth, James C. Mulloy, Eric O'Brien, LaQuita M Jones, Christopher Famulare, Ross L. Levine, Lyndsey Bolanos, Katelyn Melgar, Amy Wang, Kwangmin Choi, Scott Hoyt, Daniel T. Starczynowski, Jiang-Kang Jiang, Ellin Berman, Craig J. Thomas, Gregory J. Tawa, John P. Perentesis, and Kelli M. Wilson
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0301 basic medicine ,Myeloid ,Immunology ,Biochemistry ,Receptor tyrosine kinase ,Small Molecule Libraries ,Fight-or-flight response ,03 medical and health sciences ,Structure-Activity Relationship ,0302 clinical medicine ,Immune system ,Cell Line, Tumor ,Gene Duplication ,hemic and lymphatic diseases ,Humans ,Medicine ,Treatment resistance ,Cell survival ,Innate immune system ,biology ,Kinase ,business.industry ,Myeloid leukemia ,hemic and immune systems ,IRAK1 ,General Medicine ,Cell Biology ,Hematology ,Binding (Molecular Function) ,medicine.disease ,Xenograft Model Antitumor Assays ,Immunity, Innate ,Leukemia ,Leukemia, Myeloid, Acute ,Editorial Commentary ,030104 developmental biology ,medicine.anatomical_structure ,Interleukin-1 Receptor-Associated Kinases ,fms-Like Tyrosine Kinase 3 ,Drug Resistance, Neoplasm ,030220 oncology & carcinogenesis ,Intracellular signaling cascade ,embryonic structures ,biology.protein ,Cancer research ,Signal transduction ,Flt3 gene ,business ,Signal Transduction - Abstract
Targeted inhibitors to oncogenic kinases demonstrate encouraging clinical responses early in the treatment course, however, most patients will relapse due to target-dependent mechanisms that mitigate enzyme-inhibitor binding or through target-independent mechanisms, such as alternate activation of survival and proliferation pathways, known as adaptive resistance. One example involves the FMS-like receptor tyrosine kinase (FLT3). Activating mutations of FLT3 result in its autophosphorylation and initiation of intracellular signaling pathways, which induce abnormal survival and proliferation of leukemic cells.One of the most common mutations in acute myeloid leukemia (AML) involves the internal tandem duplication (ITD) of FLT3, which occurs in ~25% of all cases of newly diagnosed AML and confers a particularly poor prognosis. FLT3 inhibitors (FLT3i) evaluated in clinical studies as monotherapy and combination therapies have shown good initial response rates; however, patients eventually relapse with FLT3i-resistant disease. The absence of durable remission in patients treated with potent and selective FLT3i highlights the need to identify resistance mechanisms and develop additional treatment strategies. Several mechanisms contribute to resistance to selective FLT3i, including mutations in the tyrosine kinase domain of FLT3 (20-50%) or activation of parallel signaling mechanisms that bypass FLT3 signaling, referred to as adaptive resistance (30-50%). Here we describe mechanisms of adaptive resistance in FLT3-mutant AML by examining in-cell kinase and gene regulatory network responses after oncogenic signaling blockade by FLT3 inhibitors (FLT3i). Through this integrative approach, we identified activation of innate immune stress response pathways after treatment of FLT3-mutant AML cells with FLT3i. Utilizing genetic approaches, we demonstrated that innate immune pathway activation via IRAK1 and IRAK4 contributes to adaptive resistance in FLT3-mutant AML cells. The immediate nature of IRAK1/4 activation in adaptively resistant FLT3-ITD AML cells requires concomitant inhibition of these targets to avoid compensatory signaling and cell survival. Achieving optimal multi-drug combination regimens that yield extended overlapping exposure while avoiding unwanted toxicities is challenging. Therefore, we desired a small molecule inhibitor that simultaneously targeted the FLT3 and IRAK1/4 kinases to eradicate adaptively resistant FLT3-ITD AML. To overcome this adaptive resistance mechanism, we developed and optimized a novel small molecule that simultaneously inhibits FLT3 and IRAK1/4 kinases. The FLT3-IRAK1/4 inhibitor exhibited potent binding affinity for IRAK1 (KD= 2.9 nM), IRAK4 (KD= 0.3 nM), and FLT3 (KD= 0.3 nM), as well as acceptable pharmacokinetic properties in mice. Moreover, a high-resolution crystal structure demonstrates that the FLT3-IRAK1/4 inhibitor binds as a type I inhibitor (ATP-competitive binding to the active state). The FLT3-IRAK1/4 inhibitor eliminated adaptively resistant FLT3-mutant AML cell lines and patient-derived samples in vitro and in vivo, and displayed superior efficacy as compared to current targeted FLT3 therapies. Our study demonstrates that therapies that simultaneously inhibit FLT3 signaling and compensatory IRAK1/4 activation have the potential to improve the therapeutic efficacy in patients with FLT3-mutant AML. In conclusion, these findings reveal that inflammatory stress response pathways contribute to adaptive resistance in FLT3-mutant AML and suggests that this mechanism may extend to other malignant cells undergoing a stress-induced response to therapy. Disclosures Hoyt: Kurome Therapeutics: Consultancy. Berman:Astellas: Membership on an entity's Board of Directors or advisory committees, Research Funding. Levine:Qiagen: Membership on an entity's Board of Directors or advisory committees; Prelude Therapeutics: Research Funding; Amgen: Honoraria; Lilly: Honoraria; Gilead: Consultancy; C4 Therapeutics: Membership on an entity's Board of Directors or advisory committees; Novartis: Consultancy; Roche: Consultancy, Research Funding; Imago Biosciences: Membership on an entity's Board of Directors or advisory committees; Isoplexis: Membership on an entity's Board of Directors or advisory committees; Celgene: Consultancy, Research Funding; Loxo: Membership on an entity's Board of Directors or advisory committees. Rosenbaum:Kurome Therapeutics: Consultancy, Employment. Perentesis:Kurome Therapeutics: Consultancy. Starczynowski:Kurome Therapeutics: Consultancy.
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- 2019
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43. Acute myeloid leukaemia with FLT3 gene mutations of both internal tandem duplication and point mutation type.
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Chen, Weina, Jones, Dan, Jeffrey Medeiros, L., Luthra, Rajyalashmi, and Lin, Pei
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GENETIC mutation , *GENETICS , *GENES , *MYELOID leukemia , *BONE marrow diseases , *KARYOTYPES , *CHROMOSOME abnormalities - Abstract
FLT3 gene mutations, either internal tandem duplication or point mutation type, are common in acute myeloid leukaemia (AML). We describe 21 AML cases with both types of gene mutations, so-called dual mutations, representing approximately 1% of all cases. Most newly diagnosed AML with FLT3 dual mutations had monocytic differentiation and a normal karyotype. Over the disease course, changes in FLT3 mutation status were seen in 89% of cases, and were associated with cytogenetic changes. We conclude that FLT3 dual mutations occur rarely in AML, and appear to be related to clonal evolution. [ABSTRACT FROM AUTHOR]
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- 2005
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44. Characteristics and Prognosis of Adult Acute Myeloid Leukemia with Internal Tandem Duplication in the FLT3 Gene
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Ian D. Lewis, Adhra Al-Mawali, and David Gillis
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Oncology ,Acute Myeloid Leukemia ,medicine.medical_specialty ,Prognosis ,M1 ,lcsh:Medicine ,medicine.disease_cause ,FLT3 gene ,law.invention ,law ,Internal medicine ,hemic and lymphatic diseases ,medicine ,Secondary Acute Myeloid Leukemia ,Tandem duplication ,Receptor ,Polymerase chain reaction ,Mutation ,business.industry ,lcsh:R ,Myeloid leukemia ,Karyotype ,Adult Acute Myeloid Leukemia ,hemic and immune systems ,General Medicine ,body regions ,Immunology ,embryonic structures ,Original Article ,Tandem exon duplication ,business ,psychological phenomena and processes - Abstract
Objectives: Constitutive activation of the fms-like tyrosine kinase 3 (FLT3) receptor by internal tandem duplication (ITD) of the juxtamembrane region has been described in patients with acute myeloid leukemia. FLT3/ITDs are present in about 20-30% of all acute myeloid leukemia cases. It has been shown that the mutation is correlated with worse prognosis. However, none of the previous studies investigated which FAB subtype is associated with higher percentage of FLT3/ITD, thus the reason for undertaking the current study.Methods: The prevalence and the potential prognostic impact of FLT3 mutations in 39 acute myeloid leukemia patients were analyzed by genomic polymerase chain reaction. Twelve samples with FLT3/ITDs and 27 acute myeloid leukemia samples without the mutations were compared with respect to clinical prognosis and FAB subtype. Results were correlated with cytogenetic data and the clinical response.Results: FLT3/ITD mutations were found in 31% of patients. FLT3/ITD was associated with similar clinical characteristics and was more prevalent in patients with normal karyotype (83%). Interestingly, half of the FLT3/ITD aberrations were found in patients with FAB M1 (50%), and fewer were found in patients with FAB M2 (8%), M4 (8%), and M5 (8%). Although less frequent in patients with cytogenetic aberrations, FLT3/ITDs were found in 17% of patients with t(15;17). Although the study was powered to 80%, patients with FLT3/ITD mutation did not show shorter complete remission duration or a higher relapse rate.Conclusion: The data confirm that FLT3/ITD mutations represent a common alteration in adult acute myeloid leukemia, mainly with normal karyotype (83%) and de novo acute myeloid leukemia (75%), as compared to secondary acute myeloid leukemia (25%) (p
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- 2013
45. Comparison of molecular biology, immunological characteristics and clinical efficacy in patients with acute myelogenous leukemia with or without FLT3-ITD gene mutation
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Ting-ting LI, Xue-dong SUN, Zheng DONG, Chang-lin YU, Qi-yun SUN, Jian-hui QIAO, Kai-xun HU, Guang-xian LIU, Bo YAO, Hui-sheng AI, and Mei GUO
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body regions ,leukemia, promyelocytic, acute ,lcsh:R5-920 ,hemic and lymphatic diseases ,embryonic structures ,lcsh:R ,lcsh:Medicine ,hemic and immune systems ,lcsh:Medicine (General) ,NPM1 gene ,psychological phenomena and processes ,FLT3 gene ,translocation, genetic - Abstract
Objective To compare the clinical and laboratory characteristics, therapeutic efficacy and prognosis of acute myelogenous leukemia (AML) with or without FLT3-ITD gene mutation. Methods The clinical data of 93 AML patients, aged from 10 to 66 years, were retrospectively analyzed. Among them, 21 patients were FLT3-ITD gene (FLT3-ITD+AML group) positive, and 72 patients were negative for FLT3-ITD gene (FLT3-ITD-AML group). The patients' chromosomes were examined, and mutation of FLT3-ITD and NPM1 gene and the expressions of HOX11, ETO, EVI and NPM1 gene were analyzed, along with the 2-year event-free survival and 2-year overall survival were learned. Results At primary diagnosis, the proportion of patients with WBC>100×109/L, and bleeding rate was significantly higher in FLT3-ITD+ AML group than that in FLT3-ITD-AML group (P=0.04; P=0.01), but no statistical difference was found in age, immunophenotype and chromosomal abnormality (P>0.05). The complete remission (CR) rate was 28.57% in FLT3-ITD+ AML group, and it was obviously lower than that in FLT3-ITD-AML group (55.56%, P=0.013). The 2-year event-free survival was 29.2% in FLT3-ITD+ AML group, and it was significantly lower than that in FLT3-ITD-AML group (37.7%; P=0.04). Meanwhile, 33.3% of the patients in FLT3-ITD-AML group were also positive for NPM1 gene expression, and all of them did not get complete remission. However, only 1.39% of the patients expressed NPM1 gene in FLT3-ITD-AML group, but 50% of them got complete remission (P=0.022). Conclusion Patients with FLT3-ITD+AML were easily associated with high WBC counts, bleeding, lower CR rate, poor event-free survival, and poor prognosis.
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- 2013
46. MISTRG extends PDX modeling to favorable AMLs
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Mark Wunderlich and James C. Mulloy
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0301 basic medicine ,Immunology ,Favorable prognosis ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,hemic and lymphatic diseases ,Medicine ,Humans ,Homeodomain Proteins ,Myeloid Neoplasia ,business.industry ,Myeloid leukemia ,Cell Biology ,Hematology ,medicine.disease ,Leukemia ,Leukemia, Myeloid, Acute ,030104 developmental biology ,030220 oncology & carcinogenesis ,Mutation (genetic algorithm) ,Cancer research ,Flt3 gene ,business - Abstract
In this issue of Blood , [Ellegast et al][1] demonstrate that MISTRG mice allow high-level, reproducible engraftment of favorable prognosis acute myeloid leukemia (AML), a group that has been recalcitrant to attempts to develop valuable preclinical patient-derived xenograft (PDX) models.[1][2] Over
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- 2016
47. Rational for targeting the hedgehog signalling pathway in acute myeloid leukemia with FLT3 mutation
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Didier Bouscary
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Niacinamide ,Cell Survival ,Kruppel-Like Transcription Factors ,Zinc Finger Protein Gli2 ,Article ,030218 nuclear medicine & medical imaging ,Receptors, G-Protein-Coupled ,03 medical and health sciences ,Mice ,0302 clinical medicine ,fluids and secretions ,hemic and lymphatic diseases ,Cell Line, Tumor ,Gene Duplication ,STAT5 Transcription Factor ,Medicine ,Animals ,Humans ,Hedgehog Proteins ,neoplasms ,Cell Proliferation ,Myeloproliferative Disorders ,business.industry ,Phenylurea Compounds ,Stem Cells ,Veratrum Alkaloids ,Myeloid leukemia ,Nuclear Proteins ,hemic and immune systems ,Drug Synergism ,General Medicine ,Sorafenib ,Smoothened Receptor ,Cell Compartmentation ,Hedgehog signalling ,Leukemia, Myeloid, Acute ,fms-Like Tyrosine Kinase 3 ,030220 oncology & carcinogenesis ,Flt3 mutation ,embryonic structures ,Cancer research ,Commentary ,Disease Progression ,Mutant Proteins ,Flt3 gene ,business ,Signal Transduction - Abstract
FMS-like tyrosine kinase 3 (FLT3) internal tandem duplication (ITD) mutations resulting in constitutive kinase activity are common in acute myeloid leukemia (AML) and carry a poor prognosis. Several agents targeting FLT3 have been developed, but their limited clinical activity suggests that the inhibition of other factors contributing to the malignant phenotype is required. We examined gene expression data sets as well as primary specimens and found that the expression of GLI2, a major effector of the Hedgehog (Hh) signaling pathway, was increased in FLT3-ITD compared to wild-type FLT3 AML. To examine the functional role of the Hh pathway, we studied mice in which Flt3-ITD expression results in an indolent myeloproliferative state and found that constitutive Hh signaling accelerated the development of AML by enhancing signal transducer and activator of transcription 5 (STAT5) signaling and the proliferation of bone marrow myeloid progenitors. Furthermore, combined FLT3 and Hh pathway inhibition limited leukemic growth in vitro and in vivo, and this approach may serve as a therapeutic strategy for FLT3-ITD AML.
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- 2016
48. Analysis of Chromosomal Aberrations and FLT3 gene Mutations in Childhood Acute Myelogenous Leukemia Patients
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Ugur Ozbek, Ayşegül Ünüvar, Leyla Agaoglu, Omer Devecioglu, Tiraje Celkan, Gonul Aydogan, Cetin Timur, Yıldız Yildirmak, Sema Anak, Ahmet Faik Oner, Nazan Sarper, Inci Yildiz, and Ender Coskunpinar
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lcsh:Internal medicine ,Turkish population ,Chromosomal translocation ,Chromosomal translocations ,law.invention ,Loss of heterozygosity ,fluids and secretions ,Childhood Acute Myelogenous Leukemia ,law ,hemic and lymphatic diseases ,Medicine ,lcsh:RC31-1245 ,neoplasms ,Polymerase chain reaction ,D835 mutations ,Genetics ,lcsh:RC633-647.5 ,business.industry ,Point mutation ,hemic and immune systems ,lcsh:Diseases of the blood and blood-forming organs ,Hematology ,Childhood AML ,Complementation ,ITD ,FLT3 gene mutations ,embryonic structures ,Cancer research ,business ,Flt3 gene ,Research Article - Abstract
Objective: To identify the well-known common translocations and FLT3 mutations in childhood acute myelogenousleukemia (AML) patients in Turkey. Material and Methods: The study included 50 newly diagnosed patients in which t(15;17), t(8;21), and inv(16)chromosomal translocations were identified using real-time PCR and FLT3 gene mutations were identified via direct PCR amplification PCR-RE analysis. Results: In all, t(15;17) chromosomal aberrations were observed in 4 patients (8.0%), t(8;21) chromosomal aberrationswere observed in 12 patients (24.0%), inv(16) chromosomal aberrations were observed in 3 patients (6.0%), and FLT3-ITD mutations were observed in 2 patients (4.0%); FLT3-D835 point mutation heterozygosity was observed in only 1patient (2.0%) patient. Conclusion: Despite of the known literature, a patient with FLT3-ITD and FLT3-D835 double mutation shows a bettersurvival and this might be due to the complementation effect of the t(15;17) translocation. The reportedmutation ratein this article (4%) of FLT3 gene seems to be one of the first results for Turkish population.
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- 2012
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49. Concealed dagger in FLT3/ITD+ AML
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Yishai Ofran
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Male ,Myeloid ,Oncogene Proteins, Fusion ,Oncogene Proteins ,Immunology ,Biochemistry ,hemic and lymphatic diseases ,medicine ,Humans ,Myeloid Neoplasia ,business.industry ,Myeloid leukemia ,hemic and immune systems ,Cell Biology ,Hematology ,Cryptic translocation ,medicine.disease ,body regions ,Leukemia, Myeloid, Acute ,Leukemia ,medicine.anatomical_structure ,fms-Like Tyrosine Kinase 3 ,embryonic structures ,Cancer research ,Female ,Remission rate ,Flt3 gene ,business ,psychological phenomena and processes ,Flt3 itd - Abstract
Coexpression of NUP98/NSD1 and FLT3/ITD in AML is associated with very low complete remission rates and poor survival.It is the interaction between NUP98/NSD1 and FLT3/ITD that determines poor outcome in NUP98/NSD1-associated AML.
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- 2014
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50. Adding Midostaurin to Intensive Chemotherapy in FLT3-Positive AML Patients. Results from a Multicenter Historical-Controlled Study
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Ilana Hellmann, Adina Aviram, Pia Raanani, Shilo Yaari, Tamar Berger, Ofir Wolach, Yishai Ofran, Ron Ram, and Yakir Moshe
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Oncology ,medicine.medical_specialty ,Secondary leukemia ,business.industry ,Immunology ,Cell Biology ,Hematology ,Intensive chemotherapy ,medicine.disease ,Biochemistry ,Chemotherapy regimen ,chemistry.chemical_compound ,chemistry ,Internal medicine ,Disease remission ,medicine ,Cytarabine ,Midostaurin ,business ,Flt3 gene ,Febrile neutropenia ,medicine.drug - Abstract
Introduction: The phase III RATIFY study (Stone et al, NEJM 2017) demonstrated that the addition of the FLT3 inhibitor midostaurin to intensive induction and consolidation courses improves outcome in younger FLT3-positive AML patients. The toxicity and efficacy profile of adding midostaurin to chemotherapy in patients not originally included in the RATIFY study is unknown. We sought to characterize midostaurin use in a 'real-world' setting. Methods: Patients (>18 years) with FLT3-positive AML (ITD/TKD) were eligible to receive midostaurin through the Novartis extended access program that was launched in Israel in April 2016. In order to control for toxicity and efficacy outcomes in the midostaurin-treated patients, a historical control cohort was created that included patients with FLT3-positive AML from 2 participating centers that were not treated with midostaurin (all patients diagnosed after January 2015). Data were extracted from electronic patient records and were collected from several medical centers in Israel. Base-line characteristics, disease- and patient- specific parameters as well as relapse-rates and overall survival were analyzed and compared between the midostaurin treated and untreated cohorts. We used Cox regression to analyze predictors for survival. This study was approved by the Institutional Review Board. Results: Thirty-five patients were included in the analysis. The median age of the patients was 62 years (range 27-78); 40% and 20% of patients were over the age of 65 and 70 years, respectively. FLT3-ITD mutations were detected in 32 patients (91%) and 3 patients had TKD mutations (9%). Eight patients (23%) had secondary leukemia, 83% had normal karyotype and 57% were NPM1-mutated. No differences were noted between the midostaurin-treated group (n=21) and the historical control cohort (n=14) in terms of age, gender, leukemia ontogeny, cytogenetics, presenting blood counts, extramedullary involvement, performance status and comorbidity scales. More patients in the midostaurin group were found to be NPM1-mutated (66 vs. 44%, p=0.03). Furthermore, no differences were noted between the groups in terms of daunorubicin dose for induction (45, 60 and 90 mg/m2/dayin 20, 30 and 50% of patients, respectively), number of consolidations (median number of cycles - 2), cytarabine dose or allogeneic transplantation rate (45 and 36% in the midostaurin and control group, respectively). The full 14 day midostaurin course was given in most patients during induction (73%). In 5 patients midostaurin was initiated only at the post-induction courses due to technical delays in drug supply. Only 4 patients experienced dose reductions or interruptions during therapy: 3 during induction (septic shock, drug interaction and QT prolongation) and 1 during consolidation (new onset atrial fibrillation). Toxicity was comparable between the cohorts. Febrile neutropenia during induction was noted in 95 and 93% of patients in the midostaurin and control groups, respectively. Time to neutrophil and platelet recovery were also comparable (25 vs. 24 days and 24 vs. 20 days in the midostaurin and control groups respectively). Other toxicities were uncommon and not significantly different between the groups. CR/CRi rates were 85% and 58% in the midostaurin and control cohorts, respectively (p=0.17). The median follow-up time for surviving patients in the midostaurin and control cohorts were 426 and 517 days, respectively (p=0.55). During follow-up, 7 deaths occurred in the midostaurin group and 9 in the control arm. Median survival was not reached for the midostaurin treated group and was 281 days for the control group (Figure 1, p=0.42). Nine and 6 patients in remission relapsed in the midostaurin and control group, respectively, translating into a relapse-rate of 53% and 86%, respectively (p=0.19). No difference in early death rate was noted between the groups. The only factor that significantly affected overall survival in the COX-regression analysis was white blood cell count at diagnosis (p=0.03). Conclusions: In the off-trial setting, midostaurin is administered across all age groups and various FLT3-positive subtypes. In this 'real-life' setting, midostaurin is well tolerated and does not significantly add to the toxicity of chemotherapy. Longer follow-up and more patients are needed to assess the efficacy of adding midostaurin to chemotherapy in this group of patients. Figure 1. Figure 1. Disclosures Ofran: Novartis: Other: Served on a Novartis advisory board.
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- 2018
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