12 results on '"Fotis Kotasidis"'
Search Results
2. Can Dynamic Whole-Body FDG PET Imaging Differentiate between Malignant and Inflammatory Lesions?
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Stephan Skawran, Michael Messerli, Fotis Kotasidis, Josephine Trinckauf, Corina Weyermann, Ken Kudura, Daniela A. Ferraro, Janique Pitteloud, Valerie Treyer, Alexander Maurer, Martin W. Huellner, and Irene A. Burger
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dynamic whole-body positron emission tomography ,infection ,fluorodeoxyglucose ,Patlak ,oncologic imaging ,molecular imaging ,Science - Abstract
Background: Investigation of the clinical feasibility of dynamic whole-body (WB) [18F]FDG PET, including standardized uptake value (SUV), rate of irreversible uptake (Ki), and apparent distribution volume (Vd) in physiologic tissues, and comparison between inflammatory/infectious and cancer lesions. Methods: Twenty-four patients were prospectively included to undergo dynamic WB [18F]FDG PET/CT for clinically indicated re-/staging of oncological diseases. Parametric maps of Ki and Vd were generated using Patlak analysis alongside SUV images. Maximum parameter values (SUVmax, Kimax, and Vdmax) were measured in liver parenchyma and in malignant or inflammatory/infectious lesions. Lesion-to-background ratios (LBRs) were calculated by dividing the measurements by their respective mean in the liver tissue. Results: Seventy-seven clinical target lesions were identified, 60 malignant and 17 inflammatory/infectious. Kimax was significantly higher in cancer than in inflammatory/infections lesions (3.0 vs. 2.0, p = 0.002) while LBRs of SUVmax, Kimax, and Vdmax did not differ significantly between the etiologies: LBR (SUVmax) 3.3 vs. 2.9, p = 0.06; LBR (Kimax) 5.0 vs. 4.4, p = 0.05, LBR (Vdmax) 1.1 vs. 1.0, p = 0.18). LBR of inflammatory/infectious and cancer lesions was higher in Kimax than in SUVmax (4.5 vs. 3.2, p < 0.001). LBRs of Kimax and SUVmax showed a strong correlation (Spearman’s rho = 0.83, p < 0.001). Conclusions: Dynamic WB [18F]FDG PET/CT is feasible in a clinical setting. LBRs of Kimax were higher than SUVmax. Kimax was higher in malignant than in inflammatory/infectious lesions but demonstrated a large overlap between the etiologies.
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- 2022
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3. An Investigation of Stochastic Variance Reduction Algorithms for Relative Difference Penalized 3D PET Image Reconstruction.
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Robert Twyman, Simon R. Arridge, Zeljko Kereta, Bangti Jin, Ludovica Brusaferri, Sangtae Ahn, Charles W. Stearns, Brian F. Hutton, Irene A. Burger, Fotis Kotasidis, and Kris Thielemans
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- 2023
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4. BSREM for Brain Metastasis Detection with 18F-FDG-PET/CT in Lung Cancer Patients
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Virginia Liberini, Daniele A. Pizzuto, Michael Messerli, Erika Orita, Hannes Grünig, Alexander Maurer, Cäcilia Mader, Lars Husmann, Désirée Deandreis, Fotis Kotasidis, Josey Trinckauf, Alessandra Curioni, Isabelle Opitz, Sebastian Winklhofer, Martin W. Huellner, University of Zurich, and Liberini, Virginia
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Fluorine Radioisotopes ,Lung Neoplasms ,PET/CT ,10255 Clinic for Thoracic Surgery ,18F-FDG ,Brain metastases ,BSREM ,Lung cancer ,OSEM ,Fluorodeoxyglucose F18 ,Humans ,Image Processing, Computer-Assisted ,Positron Emission Tomography Computed Tomography ,Radiopharmaceuticals ,Retrospective Studies ,Brain Neoplasms ,Image Processing ,610 Medicine & health ,Computer-Assisted ,10043 Clinic for Neuroradiology ,1706 Computer Science Applications ,2741 Radiology, Nuclear Medicine and Imaging ,Radiology, Nuclear Medicine and imaging ,3614 Radiological and Ultrasound Technology ,Radiological and Ultrasound Technology ,10181 Clinic for Nuclear Medicine ,Computer Science Applications ,10032 Clinic for Oncology and Hematology - Abstract
The aim of the study was to analyze the use of block sequential regularized expectation maximization (BSREM) with different β-values for the detection of brain metastases in digital fluorine-18 labeled 2-deoxy-2-fluoro-D-glucose (18F-FDG) PET/CT in lung cancer patients. We retrospectively analyzed staging/restaging 18F-FDG PET/CT scans of 40 consecutive lung cancer patients with new brain metastases, confirmed by MRI. PET images were reconstructed using BSREM (β-values of 100, 200, 300, 400, 500, 600, 700) and OSEM. Two independent blinded readers (R1 and R2) evaluated each reconstruction using a 4-point scale for general image quality, noise, and lesion detectability. SUVmax of metastases, brain background, target-to-background ratio (TBR), and contrast recovery (CR) ratio were recorded for each reconstruction. Among all reconstruction techniques, differences in qualitative parameters were analyzed using non-parametric Friedman test, while differences in quantitative parameters were compared using analysis of variances for repeated measures. Cohen’s kappa (k) was used to measure inter-reader agreement. The overall detectability of brain metastases was highest for BSREM200 (R1: 2.83 ± 1.17; R2: 2.68 ± 1.32) and BSREM300 (R1: 2.78 ± 1.23; R2: 2.68 ± 1.36), followed by BSREM100, which had lower accuracy owing to noise. The highest median TBR was found for BSREM100 (R1: 2.19 ± 1.05; R2: 2.42 ± 1.08), followed by BSREM200 and BSREM300. Image quality ratings were significantly different among reconstructions (p β-value. Inter-reader agreement was particularly high for the detectability of photopenic metastases and blurring (all k > 0.65). BSREM200 and BSREM300 yielded the best results for the detection of brain metastases, surpassing both BSREM400 and OSEM, typically used in clinical practice.
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- 2022
5. An Investigation of Stochastic Variance Reduction Algorithms for 3D Penalised PET Image Reconstruction
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Kris Thielemans, Fotis Kotasidis, Irene A. Burger, Brian Hutton, Charles Stearns, Sangtae Ahn, Ludovica Brusaferri, Bangti Jin, Zeljko Kereta, Simon Arridge, and Robert Twyman
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Application of stochastic variance reduction algorithms to iterative PET reconstruction. We investigated the SAGA and SVRG algorithms for non-TOF PET image reconstruction. Both similated data and a patient data sets were used in the analysis. We found that the stochastic algorithms can improve convergence rate and eliminate behaviour, commonly know as limit cycle behaviour, from PET reconstruction within 5 epochs.
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- 2022
6. Systematic Evaluation of the Impact of Involuntary Motion in Whole Body Dynamic PET
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Ander Biguri, Fotis Kotasidis, Alexander C. Whitehead, Irene Burger, Brian F. Hutton, and Kris Thielemans
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- 2021
7. Image enhancement of whole-body oncology [
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Abolfazl, Mehranian, Scott D, Wollenweber, Matthew D, Walker, Kevin M, Bradley, Patrick A, Fielding, Kuan-Hao, Su, Robert, Johnsen, Fotis, Kotasidis, Floris P, Jansen, and Daniel R, McGowan
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PET ,Fluorodeoxyglucose F18 ,Positron Emission Tomography Computed Tomography ,Positron-Emission Tomography ,Deep neural networks ,Image Processing, Computer-Assisted ,Humans ,Image quality ,Original Article ,Neural Networks, Computer ,Tomography, X-Ray Computed ,Algorithms - Abstract
Purpose To enhance the image quality of oncology [18F]-FDG PET scans acquired in shorter times and reconstructed by faster algorithms using deep neural networks. Methods List-mode data from 277 [18F]-FDG PET/CT scans, from six centres using GE Discovery PET/CT scanners, were split into ¾-, ½- and ¼-duration scans. Full-duration datasets were reconstructed using the convergent block sequential regularised expectation maximisation (BSREM) algorithm. Short-duration datasets were reconstructed with the faster OSEM algorithm. The 277 examinations were divided into training (n = 237), validation (n = 15) and testing (n = 25) sets. Three deep learning enhancement (DLE) models were trained to map full and partial-duration OSEM images into their target full-duration BSREM images. In addition to standardised uptake value (SUV) evaluations in lesions, liver and lungs, two experienced radiologists scored the quality of testing set images and BSREM in a blinded clinical reading (175 series). Results OSEM reconstructions demonstrated up to 22% difference in lesion SUVmax, for different scan durations, compared to full-duration BSREM. Application of the DLE models reduced this difference significantly for full-, ¾- and ½-duration scans, while simultaneously reducing the noise in the liver. The clinical reading showed that the standard DLE model with full- or ¾-duration scans provided an image quality substantially comparable to full-duration scans with BSREM reconstruction, yet in a shorter reconstruction time. Conclusion Deep learning–based image enhancement models may allow a reduction in scan time (or injected activity) by up to 50%, and can decrease reconstruction time to a third, while maintaining image quality. Supplementary Information The online version contains supplementary material available at 10.1007/s00259-021-05478-x.
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- 2021
8. Whole-body parametric [
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Michael, Messerli, Fotis, Kotasidis, Daniela A, Ferraro, Ken, Kudura, Valerie, Treyer, Josephine, Trinckauf, Corina, Weyermann, Martin, Hüllner, Philipp, Kaufmann, and Irene A, Burger
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Lung Neoplasms ,Fluorodeoxyglucose F18 ,Positron Emission Tomography Computed Tomography ,Positron-Emission Tomography ,Embolism ,Humans ,Whole Body Imaging ,Radiopharmaceuticals ,Image of the Month - Published
- 2020
9. Patient-Specific Hybrid Whole-body PET Parametric Imaging From SpeedModulated Continuous Bed Motion Dynamic Data
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Valentina Garibotto, A. Fotis Kotasidis, and Habib Zaidi
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Protocol (science) ,Accuracy and precision ,Computer science ,Dynamic data ,Dynamic imaging ,Work (physics) ,Patient specific ,Patlak plot ,Motion (physics) ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Algorithm - Abstract
In our previous work a hybrid whole-body dynamic protocol was proposed, enabling full compartmental modelling, as well as whole-body (WB) Patlak analysis, in continuous bed motion (CBM) acquisition mode. While such an approach improves upon previous WB dynamic protocols, kinetic parameters are estimated with reduced precision and accuracy due to limited counting statistics. In this work we propose a new patient/pathology specific whole-body dynamic imaging protocol with the aim to maximize the counting statistics in the regions of interest and achieve optimum kinetic parameter accuracy and precision based on a personalized dynamic data acquisition. This is achieved by modulating the CBM bed speed within each pass depending on the FOV of primary interest as opposed to utilizing a constant speed for the entire FOV. Therefore in cases where the pathology is known and localized to a certain degree, such as in response to therapy or based on information from other modalities or clinical findings, the protocol can be modulated in such a way as to maximize the counting statistics and kinetic parameter accuracy and precision in a disease and patient specific way. Using dynamic WB simulations as well as initial clinical dynamic WB scans, we demonstrate the kinetic parameter estimation benefits and the clinical feasibility of the proposed protocol.
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- 2017
10. Patient-Specific Hybrid Whole-body PET Parametric Imaging From SpeedModulated Continuous Bed Motion Dynamic Data
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Fotis Kotasidis, A., primary, Garibotto, Valentina, additional, and Zaidi, Habib, additional
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- 2017
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11. Experimental validation of estimated spatially variant radioisotope-specific point spread functions using published positron range simulations and fluorine-18 measurements.
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Jose M Anton-Rodriguez, Georgios Krokos, Fotis Kotasidis, Marie-Claude Asselin, Olivia Morris, Peter Julyan, Anthony Archer, and Julian C Matthews
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POSITRON emission tomography ,RADIOISOTOPES ,GAUSSIAN function - Abstract
In this work we compare spatially variant radioisotope-specific point spread functions (PSFs) derived from published positron range data with measured data using a high resolution research tomograph (HRRT). Spatially variant PSFs were measured on a HRRT for fluorine-18, carbon-11 and gallium-68 using an array of printed point sources. For gallium-68, this required modification of the original design to handle its longer positron range. Using the fluorine-18 measurements and previously published data from Monte-Carlo simulations of positron range, estimated PSFs for carbon-11 and gallium-68 were calculated and compared with experimental data. A double 3D Gaussian function was fitted to the estimated and measured data and used to model the spatially varying PSFs over the scanner field of view (FOV). Differences between the measured and estimated PSFs were quantified using the full-width-at-half-maximum (FWHM) and full-width-at-tenth-maximum (FWTM) in the tangential, radial and axial directions. While estimated PSFs were generally in agreement with the measured PSFs over the entire FOV better agreement was observed (FWHM and FWTM differences of less than 10%) when using one of the two sets of positron range simulations, especially for gallium-68 and for the FWTM. Spatially variant radioisotope specific PSFs can be accurately estimated from fluorine-18 measurements and published positron range data. We have experimentally validated this approach for carbon-11 and gallium-68, and such an approach may be applicable to other radioisotopes such as oxygen-15 for which measurements are not practical. [ABSTRACT FROM AUTHOR]
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- 2018
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12. Accelerated time-of-flight (TOF) PET image reconstruction using TOF bin subsetization and TOF weighting matrix pre-computation.
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Abolfazl Mehranian, Fotis Kotasidis, and Habib Zaidi
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POSITRON emission tomography , *IMAGE quality in radiography , *SIGNAL-to-noise ratio , *IMAGE reconstruction algorithms , *MAXIMUM likelihood statistics - Abstract
Time-of-flight (TOF) positron emission tomography (PET) technology has recently regained popularity in clinical PET studies for improving image quality and lesion detectability. Using TOF information, the spatial location of annihilation events is confined to a number of image voxels along each line of response, thereby the cross-dependencies of image voxels are reduced, which in turns results in improved signal-to-noise ratio and convergence rate. In this work, we propose a novel approach to further improve the convergence of the expectation maximization (EM)-based TOF PET image reconstruction algorithm through subsetization of emission data over TOF bins as well as azimuthal bins. Given the prevalence of TOF PET, we elaborated the practical and efficient implementation of TOF PET image reconstruction through the pre-computation of TOF weighting coefficients while exploiting the same in-plane and axial symmetries used in pre-computation of geometric system matrix. In the proposed subsetization approach, TOF PET data were partitioned into a number of interleaved TOF subsets, with the aim of reducing the spatial coupling of TOF bins and therefore to improve the convergence of the standard maximum likelihood expectation maximization (MLEM) and ordered subsets EM (OSEM) algorithms. The comparison of on-the-fly and pre-computed TOF projections showed that the pre-computation of the TOF weighting coefficients can considerably reduce the computation time of TOF PET image reconstruction. The convergence rate and bias-variance performance of the proposed TOF subsetization scheme were evaluated using simulated, experimental phantom and clinical studies. Simulations demonstrated that as the number of TOF subsets is increased, the convergence rate of MLEM and OSEM algorithms is improved. It was also found that for the same computation time, the proposed subsetization gives rise to further convergence. The bias-variance analysis of the experimental NEMA phantom and a clinical FDG-PET study also revealed that for the same noise level, a higher contrast recovery can be obtained by increasing the number of TOF subsets. It can be concluded that the proposed TOF weighting matrix pre-computation and subsetization approaches enable to further accelerate and improve the convergence properties of OSEM and MLEM algorithms, thus opening new avenues for accelerated TOF PET image reconstruction. [ABSTRACT FROM AUTHOR]
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- 2016
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