414 results on '"Gas-exchange"'
Search Results
2. A decay‐modeled compressed sensing reconstruction approach for non‐Cartesian hyperpolarized 129Xe MRI.
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Plummer, Joseph W., Hussain, Riaz, Bdaiwi, Abdullah S., Soderlund, Stephanie A., Hoyos, Xavier, Lanier, John M., Garrison, William J., Parra‐Robles, Juan, Willmering, Matthew M., Niedbalski, Peter J., Cleveland, Zackary I., and Walkup, Laura L.
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COMPRESSED sensing ,MAGNETIC resonance imaging ,VENTILATION ,IMAGE reconstruction - Abstract
Purpose: Hyperpolarized 129Xe MRI benefits from non‐Cartesian acquisitions that sample k‐space efficiently and rapidly. However, their reconstructions are complex and burdened by decay processes unique to hyperpolarized gas. Currently used gridded reconstructions are prone to artifacts caused by magnetization decay and are ill‐suited for undersampling. We present a compressed sensing (CS) reconstruction approach that incorporates magnetization decay in the forward model, thereby producing images with increased sharpness and contrast, even in undersampled data. Methods: Radio‐frequency, T1, and T2*$$ {\mathrm{T}}_2^{\ast } $$ decay processes were incorporated into the forward model and solved using iterative methods including CS. The decay‐modeled reconstruction was validated in simulations and then tested in 2D/3D‐spiral ventilation and 3D‐radial gas‐exchange MRI. Quantitative metrics including apparent‐SNR and sharpness were compared between gridded, CS, and twofold undersampled CS reconstructions. Observations were validated in gas‐exchange data collected from 15 healthy and 25 post‐hematopoietic‐stem‐cell‐transplant participants. Results: CS reconstructions in simulations yielded images with threefold increases in accuracy. CS increased sharpness and contrast for ventilation in vivo imaging and showed greater accuracy for undersampled acquisitions. CS improved gas‐exchange imaging, particularly in the dissolved‐phase where apparent‐SNR improved, and structure was made discernable. Finally, CS showed repeatability in important global gas‐exchange metrics including median dissolved‐gas signal ratio and median angle between real/imaginary components. Conclusion: A non‐Cartesian CS reconstruction approach that incorporates hyperpolarized 129Xe decay processes is presented. This approach enables improved image sharpness, contrast, and overall image quality in addition to up‐to threefold undersampling. This contribution benefits all hyperpolarized gas MRI through improved accuracy and decreased scan durations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Insights on physiological, antioxidant and flowering response to salinity stress of two candidate ornamental species: the native coastal geophytes Pancratium maritimum L. and Eryngium maritimum L.
- Author
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Cerrato, Marcello Dante, Mir-Rosselló, Pere Miquel, Cortés-Fernández, Iván, Ribas-Serra, Arnau, Douthe, Cyril, Cardona, Carles, Sureda, Antoni, Flexas, Jaume, and Gil Vives, Lorenzo
- Abstract
Increasing seawater influence in coastal areas is an ongoing environmental issue. Gardening is a widespread activity mainly in touristic areas such as the Mediterranean coasts. However, the use of exotic species well adapted to salinity encompasses the risk of invasive species introduction. This study aimed to evaluate salinity tolerance of native geophytes, Pancratium maritimum L. and Eryngium maritimum L., to assess their use as ornamental species in salt affected coastal areas. Experiments were conducted using cultivated plants for flowering response and physiological and enzymatic antioxidant response. Six treatments were applied for two months, exposing plants to seawater (SW) dilutions (Tap-Water, 6.25%SW, 12.5%SW, 25%SW, 50%SW and 100%SW). Taxa decreased inflorescence production being this effect more architectonical in E. maritimum and affecting all inflorescence integrity in P. maritimum. Flowering time was strongly delayed and reduced in P. maritimum, while E. maritimum showed smaller effects among treatments. Physiological and biochemical response showed at moderate salinity levels (1/4SW) variation concomitant with late stress response and senescence in P. maritimum, with decreased water use efficiency, NPQ values, and enzymatic activity, and increased malondialdehyde (MDA) levels. In contrast, E. maritimum showed early stress response with steady gas exchange response, increasing NPQ values and catalase (CAT) and superoxide dimutase (SOD) activity, and decreasing MDA levels with salinity. Glutathione enzymes showed limited participation in both species. The results of this study suggest that neither species can be classified as halophytes, but they exhibit tolerance to low and moderate salinity levels, making them suitable for ornamental use. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Symbiotic Functioning and Photosynthetic Rates Induced by Rhizobia Associated with Jack Bean (Canavalia ensiformis L.) Nodulation in Eswatini.
- Author
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Ngwenya, Zanele D. and Dakora, Felix D.
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PHOTOSYNTHETIC rates ,BEANS ,GRAIN yields ,LEGUMES ,MICROBIAL inoculants ,STRAIN rate ,BRADYRHIZOBIUM - Abstract
Improving the efficiency of the legume–rhizobia symbiosis in African soils for increased grain yield would require the use of highly effective strains capable of nodulating a wide range of legume plants. This study assessed the photosynthetic functioning, N
2 fixation, relative symbiotic effectiveness (%RSE) and C assimilation of 22 jack bean (Canavalia ensiformis L.) microsymbionts in Eswatini soils as a first step to identifying superior isolates for inoculant production. The results showed variable nodule number, nodule dry matter, shoot biomass and photosynthetic rates among the strains tested under glasshouse conditions. Both symbiotic parameters and C accumulation differed among the test isolates at the shoot, root and whole-plant levels. Although 7 of the 22 jack bean isolates showed much greater relative symbiotic efficiency than the commercial Bradyrhizobium strain XS21, only one isolate (TUTCEeS2) was statistically superior to the inoculant strain, which indicates its potential for use in inoculant formulation after field testing. Furthermore, the isolates that recorded high %RSE elicited greater amounts of fixed N. [ABSTRACT FROM AUTHOR]- Published
- 2023
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5. Effects of CPAP and FiO2 on respiratory effort and lung stress in early COVID-19 pneumonia: a randomized, crossover study.
- Author
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Giosa, Lorenzo, Collins, Patrick Duncan, Sciolla, Martina, Cerrone, Francesca, Di Blasi, Salvatore, Macrì, Matteo Maria, Davicco, Luca, Laguzzi, Andrea, Gorgonzola, Fabiana, Penso, Roberto, Steinberg, Irene, Muraccini, Massimo, Perboni, Alberto, Russotto, Vincenzo, Camporota, Luigi, Bellani, Giacomo, and Caironi, Pietro
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LUNGS , *COVID-19 , *ADULT respiratory distress syndrome , *OXYGEN masks , *PNEUMONIA - Abstract
Background: in COVID-19 acute respiratory failure, the effects of CPAP and FiO2 on respiratory effort and lung stress are unclear. We hypothesize that, in the compliant lungs of early Sars-CoV-2 pneumonia, the application of positive pressure through Helmet-CPAP may not decrease respiratory effort, and rather worsen lung stress and oxygenation when compared to higher FiO2 delivered via oxygen masks. Methods: In this single-center (S.Luigi Gonzaga University-Hospital, Turin, Italy), randomized, crossover study, we included patients receiving Helmet-CPAP for early (< 48 h) COVID-19 pneumonia without additional cardiac or respiratory disease. Healthy subjects were included as controls. Participants were equipped with an esophageal catheter, a non-invasive cardiac output monitor, and an arterial catheter. The protocol consisted of a random sequence of non-rebreather mask (NRB), Helmet-CPAP (with variable positive pressure and FiO2) and Venturi mask (FiO2 0.5), each delivered for 20 min. Study outcomes were changes in respiratory effort (esophageal swing), total lung stress (dynamic + static transpulmonary pressure), gas-exchange and hemodynamics. Results: We enrolled 28 COVID-19 patients and 7 healthy controls. In all patients, respiratory effort increased from NRB to Helmet-CPAP (5.0 ± 3.7 vs 8.3 ± 3.9 cmH2O, p < 0.01). However, Helmet's pressure decreased by a comparable amount during inspiration (− 3.1 ± 1.0 cmH2O, p = 0.16), therefore dynamic stress remained stable (p = 0.97). Changes in static and total lung stress from NRB to Helmet-CPAP were overall not significant (p = 0.07 and p = 0.09, respectively), but showed high interpatient variability, ranging from − 4.5 to + 6.1 cmH2O, and from − 5.8 to + 5.7 cmH2O, respectively. All findings were confirmed in healthy subjects, except for an increase in dynamic stress (p < 0.01). PaO2 decreased from NRB to Helmet-CPAP with FiO2 0.5 (107 ± 55 vs 86 ± 30 mmHg, p < 0.01), irrespective of positive pressure levels (p = 0.64). Conversely, with Helmet's FiO2 0.9, PaO2 increased (p < 0.01), but oxygen delivery remained stable (p = 0.48) as cardiac output decreased (p = 0.02). When PaO2 fell below 60 mmHg with VM, respiratory effort increased proportionally (p < 0.01, r = 0.81). Conclusions: In early COVID-19 pneumonia, Helmet-CPAP increases respiratory effort without altering dynamic stress, while the effects upon static and total stress are variable, requiring individual assessment. Oxygen masks with higher FiO2 provide better oxygenation with lower respiratory effort. Trial registration Retrospectively registered (13-May-2021): clinicaltrials.gov (NCT04885517), https://clinicaltrials.gov/ct2/show/NCT04885517. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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6. The carbon-concentrating mechanism of the extremophilic red microalga Cyanidioschyzon merolae.
- Author
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Steensma, Anne K., Shachar-Hill, Yair, and Walker, Berkley J.
- Abstract
Cyanidioschyzonmerolae is an extremophilic red microalga which grows in low-pH, high-temperature environments. The basis of C. merolae's environmental resilience is not fully characterized, including whether this alga uses a carbon-concentrating mechanism (CCM). To determine if C. merolae uses a CCM, we measured CO
2 uptake parameters using an open-path infra-red gas analyzer and compared them to values expected in the absence of a CCM. These measurements and analysis indicated that C. merolae had the gas-exchange characteristics of a CCM-operating organism: low CO2 compensation point, high affinity for external CO2 , and minimized rubisco oxygenation. The biomass δ13 C of C. merolae was also consistent with a CCM. The apparent presence of a CCM in C. merolae suggests the use of an unusual mechanism for carbon concentration, as C. merolae is thought to lack a pyrenoid and gas-exchange measurements indicated that C. merolae primarily takes up inorganic carbon as carbon dioxide, rather than bicarbonate. We use homology to known CCM components to propose a model of a pH-gradient-based CCM, and we discuss how this CCM can be further investigated. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
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7. Impacts of climate and tree morphology on tree-ring stable isotopes in central Mongolia.
- Author
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Leland, Caroline, Andreu-Hayles, Laia, Cook, Edward R, Anchukaitis, Kevin J, Byambasuren, Oyunsanaa, Davi, Nicole, Hessl, Amy, Martin-Benito, Dario, Nachin, Baatarbileg, and Pederson, Neil
- Subjects
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STABLE isotopes , *TREE-rings , *DROUGHTS , *CLIMATE extremes , *WATER efficiency , *CLIMATE sensitivity , *TREES , *PINE - Abstract
Recent climate extremes in Mongolia have ignited a renewed interest in understanding past climate variability over centennial and longer time scales across north-central Asia. Tree-ring width records have been extensively studied in Mongolia as proxies for climate reconstruction, however, the climate and environmental signals of tree-ring stable isotopes from this region need to be further explored. Here, we evaluated a 182-year record of tree-ring δ13C and δ18O from Siberian Pine (Pinus sibirica Du Tour) from a xeric site in central Mongolia (Khorgo Lava) to elucidate the environmental factors modulating these parameters. First, we analyzed the climate sensitivity of tree-ring δ13C and δ18O at Khorgo Lava for comparison with ring-width records, which have been instrumental in reconstructing hydroclimate in central Mongolia over two millennia. We also compared stable isotope records of trees with partial cambial dieback ('strip-bark morphology'), a feature of long-lived conifers growing on resource-limited sites, and trees with a full cambium ('whole-bark morphology'), to assess the inferred leaf-level physiological behavior of these trees. We found that interannual variability in tree-ring δ13C and δ18O reflected summer hydroclimatic variability, and captured recent, extreme drought conditions, thereby complementing ring-width records. The tree-ring δ18O records also had a spring temperature signal and thus expanded the window of climate information recorded by these trees. Over longer time scales, strip-bark trees had an increasing trend in ring-widths, δ13C (and intrinsic water-use efficiency, iWUE) and δ18O, relative to whole-bark trees. Our results suggest that increases in iWUE at this site might be related to a combination of leaf-level physiological responses to increasing atmospheric CO2, recent drought, and stem morphological changes. Our study underscores the potential of stable isotopes for broadening our understanding of past climate in north-central Asia. However, further studies are needed to understand how stem morphological changes might impact stable isotopic trends. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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8. Assessing the effects of early and timely sowing on wheat cultivar HD 2967 under current and future tropospheric ozone scenarios.
- Author
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Ghosh, Annesha, Pandey, Bhanu, Agrawal, Madhoolika, and Agrawal, S.B.
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PLANT yields , *WATER efficiency , *SUSTAINABILITY , *TROPOSPHERIC ozone , *GRAIN yields - Abstract
This study investigates the impact of elevated ozone (eO 3) levels on the growth and yield of the wheat cultivar HD 2967 under different sowing dates in open-top chambers. Wheat was sown early on November 1st and timely on November 20th, 2017, under ambient and elevated O 3 (ambient + 20 ppb), resulting in four treatment groups: AT (ambient + timely), ET (elevated + timely), AE (ambient + early), and EE (elevated + early). Results showed significant reductions in morphological traits and gas-exchange parameters, including photosynthetic rate, stomatal conductance, and water use efficiency under eO 3. The most notable decreases were observed 40 days after germination (DAG) compared to 80 DAG. Interestingly, while a higher percentage reduction was observed under ET at 80 DAG, a reversal in the trend of percentage reduction between the two stages was noted, suggesting a dynamic response of the wheat cultivar to stress across the growth stage. However, compared with ET's results, early sowing mitigated these negative effects under a futuristic O 3 level scenario, showing no significant impact on grain yield and productivity factors. This resilience is attributed to the extended growth period, enhancing photosynthesis and biomass accumulation while avoiding high eO 3 concentrations during critical reproductive stages. Furthermore, a trade-off in ET plants suggests resources are allocated towards defense (enzymatic and non-enzymatic antioxidants) at the expense of growth, while EE conditions favor growth at later stages, maintaining reproductive fitness despite eO 3 levels. Under conventional timely sowing, wheat may suffer yield declines of up to 30 % amidst rising eO 3 levels. Early sowing emerges as a proactive strategy to maintain wheat productivity under increasing O 3 stress. Future studies should explore the effectiveness of early sowing across multiple wheat cultivars and climatic conditions to inform sustainable agricultural practices in high O 3 areas. [Display omitted] • Early sowing mitigates adverse effects of eO 3 on wheat biomass and photosynthesis. • Extended growth period under early sowing compensates for grain yield loss despite increased O 3. • Conventional timely sowing risks significant wheat yield decline under projected higher O 3 levels. • Trade-off observed between growth and defense mechanisms under timely sowing and eO 3 conditions. • Early sowing can be akey strategy to safeguard wheat productivity in the IGP region against escalating O 3 concentrations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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9. A multiplexed gas exchange system for increased throughput of photosynthetic capacity measurements
- Author
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Salter, William T, Gilbert, Matthew E, and Buckley, Thomas N
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Plant Biology ,Biological Sciences ,Phenotyping ,Photosynthesis ,High-throughput ,Gas-exchange ,Photosynthetic capacity ,A(max) ,Amax ,Biochemistry and Cell Biology ,Agricultural Biotechnology ,Plant Biology & Botany ,Agricultural biotechnology ,Bioinformatics and computational biology ,Plant biology - Abstract
BackgroundExisting methods for directly measuring photosynthetic capacity (Amax) have low throughput, which creates a key bottleneck for pre-breeding and ecological research. Currently available commercial leaf gas exchange systems are not designed to maximize throughput, on either a cost or time basis.ResultsWe present a novel multiplexed semi-portable gas exchange system, OCTOflux, that can measure Amax with approximately 4-7 times the throughput of commercial devices, despite a lower capital cost. The main time efficiency arises from having eight leaves simultaneously acclimate to saturating CO2 and high light levels; the long acclimation periods for each leaf (13.8 min on average in this study) thus overlap to a large degree, rather than occurring sequentially. The cost efficiency arises partly from custom-building the system and thus avoiding commercial costs like distribution, marketing and profit, and partly from optimizing the system's design for Amax throughput rather than flexibility for other types of measurements.ConclusionThroughput for Amax measurements can be increased greatly, on both a cost and time basis, by multiplexing gas streams from several leaf chambers connected to a single gas analyzer. This can help overcome the bottleneck in breeding and ecological research posed by limited phenotyping throughput for Amax.
- Published
- 2018
10. Carbonyl sulfide exchange in soils for better estimates of ecosystem carbon uptake
- Author
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Campbell, J. [Univ. of California-Merced, Merced, CA (United States). Dept. of Environmental Engineering]
- Published
- 2016
- Full Text
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11. Evolution of hemoglobin function in tropical air‐breathing catfishes.
- Author
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Andersen, Niels Christian Moth, Fago, Angela, and Damsgaard, Christian
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HEMOGLOBINS , *CATFISHES - Abstract
The evolution of hemoglobin function in the transition from water‐ to air‐breathing has been highly debated but remains unresolved. Here, we characterized the hemoglobin function in five closely related water‐ and air‐breathing catfishes. We identify distinct directions of hemoglobin evolution in the clades that evolved air‐breathing, and we show strong selection on hemoglobin function within the catfishes. These findings show that the lack of a general direction in hemoglobin function in the transition from water‐ to air‐breathing may have resulted from divergent selection on hemoglobin function in independent clades of air‐breathing fishes. Research highlights: 1.We show that the evolution of air‐breathing resulted in distinct changes in hemoglobin function.2.This illustrates that the adaptations to air‐breathing cannot be generalized across independent groups of air‐breathing fishes. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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12. 烂皮病菌侵染对新疆杨光合特性及 碳水代谢的影响.
- Author
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李金鑫, 张一南, 苗瑞芬, 邢军超, 李 敏, 申宛娜, 王 黎, and 赵嘉平
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WATER efficiency ,WATER pressure ,VAPOR pressure ,PHOTOSYNTHETIC rates ,STOMATA ,CHLOROPHYLL spectra ,CHLOROPHYLL ,WATER vapor - Abstract
Copyright of Forest Research is the property of Forest Research Editorial Office and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2021
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13. Analysis of the PKT correction for direct CO2 flux measurements over the ocean
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Landwehr, S., Miller, S. D, Smith, M. J, Saltzman, E. S, and Ward, B.
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air-sea exchange ,gas-exchange ,wind-speed ,open-path ,turbulence ,heat ,temperature ,platforms ,system ,flow - Published
- 2014
14. Experimental Investigations on Determination of Polymer Packing Material Composition with Biocide Additives
- Author
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V. V. Kuzmich, N. G. Kozlov, I. I. Karpunin, and O. V. Balabanova
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packing ,nano-technology ,anti-microbial activity ,polymer materials ,microflora ,selective permeability ,microorganisms ,gas-exchange ,moisture exchange ,Technology - Abstract
The paper shows that creation of materials with antibacterial and antifungal action presupposes an introduction of additives in them. One of the directions concerning fight against mold fungi is an inclusion of biocide additives having vegetable origin in structure of polymer materials used for manufacturing packing products. The main mission of anti-microbial additives is reduction of microbe amount in product mass and on its surface. Activity of anti-microbial compounds depends on the following parameters: concentration of active component, pH, temperature, polymer type, introduction method (with plasticizer or in melting state) and time period of their contact with polymer. In addition it is necessary to take into account such not unimportant factor as sensitivity of micro-organisms. Modern film polymer materials ensure only a certain level of product protection. They can not targetedly affect biochemical and microbiological changes in a packing product. It is necessary to develop new packing materials with selective permeability that create a barrier on the way of extremely intensive gas and moisture exchange, outside microflora flow, and prevent an evolution of undesired micro-organisms on packing products. Polymers have been selected as a basis for a bactericide packing material. Investigations have shown that composition including PEHP 98% (polyethylene of high pressure) + DGR (disproportionate gum rosin) + DETA (diethylenetriamine) has inhibited (hindered) sufficiently in a good way growth of mold fungi and PEHP composition with additives of tallow pitch and polyethylenepolyamine has demonstrated a rapid deterioration of strength characteristics and an increase in additive of the supposed mixture including pine oleoresin (POR) with DETA and DGR (with DETA more than 2%) hinders rapidly strength material characteristics.
- Published
- 2019
- Full Text
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15. Rice Stomatal Mega-Papillae Restrict Water Loss and Pathogen Entry
- Author
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Mutiara K. Pitaloka, Emily L. Harrison, Christopher Hepworth, Samart Wanchana, Theerayut Toojinda, Watchara Phetluan, Robert A. Brench, Supatthra Narawatthana, Apichart Vanavichit, Julie E. Gray, Robert S. Caine, and Siwaret Arikit
- Subjects
stomata ,subsidiary cells ,papillae ,silicon ,gas-exchange ,bacterial pathogen ,Plant culture ,SB1-1110 - Abstract
Rice (Oryza sativa) is a water-intensive crop, and like other plants uses stomata to balance CO2 uptake with water-loss. To identify agronomic traits related to rice stomatal complexes, an anatomical screen of 64 Thai and 100 global rice cultivars was undertaken. Epidermal outgrowths called papillae were identified on the stomatal subsidiary cells of all cultivars. These were also detected on eight other species of the Oryza genus but not on the stomata of any other plant species we surveyed. Our rice screen identified two cultivars that had “mega-papillae” that were so large or abundant that their stomatal pores were partially occluded; Kalubala Vee had extra-large papillae, and Dharia had approximately twice the normal number of papillae. These were most accentuated on the flag leaves, but mega-papillae were also detectable on earlier forming leaves. Energy dispersive X-Ray spectrometry revealed that silicon is the major component of stomatal papillae. We studied the potential function(s) of mega-papillae by assessing gas exchange and pathogen infection rates. Under saturating light conditions, mega-papillae bearing cultivars had reduced stomatal conductance and their stomata were slower to close and re-open, but photosynthetic assimilation was not significantly affected. Assessment of an F3 hybrid population treated with Xanthomonas oryzae pv. oryzicola indicated that subsidiary cell mega-papillae may aid in preventing bacterial leaf streak infection. Our results highlight stomatal mega-papillae as a novel rice trait that influences gas exchange, stomatal dynamics, and defense against stomatal pathogens which we propose could benefit the performance of future rice crops.
- Published
- 2021
- Full Text
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16. Rice Stomatal Mega-Papillae Restrict Water Loss and Pathogen Entry.
- Author
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Pitaloka, Mutiara K., Harrison, Emily L., Hepworth, Christopher, Wanchana, Samart, Toojinda, Theerayut, Phetluan, Watchara, Brench, Robert A., Narawatthana, Supatthra, Vanavichit, Apichart, Gray, Julie E., Caine, Robert S., and Arikit, Siwaret
- Subjects
RICE ,XANTHOMONAS oryzae ,ORYZA ,BENEFIT performances ,PLANT species ,WATER efficiency ,PATHOGENIC microorganisms - Abstract
Rice (Oryza sativa) is a water-intensive crop, and like other plants uses stomata to balance CO
2 uptake with water-loss. To identify agronomic traits related to rice stomatal complexes, an anatomical screen of 64 Thai and 100 global rice cultivars was undertaken. Epidermal outgrowths called papillae were identified on the stomatal subsidiary cells of all cultivars. These were also detected on eight other species of the Oryza genus but not on the stomata of any other plant species we surveyed. Our rice screen identified two cultivars that had "mega-papillae" that were so large or abundant that their stomatal pores were partially occluded; Kalubala Vee had extra-large papillae, and Dharia had approximately twice the normal number of papillae. These were most accentuated on the flag leaves, but mega-papillae were also detectable on earlier forming leaves. Energy dispersive X-Ray spectrometry revealed that silicon is the major component of stomatal papillae. We studied the potential function(s) of mega-papillae by assessing gas exchange and pathogen infection rates. Under saturating light conditions, mega-papillae bearing cultivars had reduced stomatal conductance and their stomata were slower to close and re-open, but photosynthetic assimilation was not significantly affected. Assessment of an F3 hybrid population treated with Xanthomonas oryzae pv. oryzicola indicated that subsidiary cell mega-papillae may aid in preventing bacterial leaf streak infection. Our results highlight stomatal mega-papillae as a novel rice trait that influences gas exchange, stomatal dynamics, and defense against stomatal pathogens which we propose could benefit the performance of future rice crops. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
17. Measuring 129Xe transfer across the blood‐brain barrier using MR spectroscopy.
- Author
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Rao, Madhwesha R., Norquay, Graham, Stewart, Neil J., and Wild, Jim M.
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BLOOD-brain barrier ,GRAY matter (Nerve tissue) ,ERYTHROCYTES ,NUCLEAR magnetic resonance spectroscopy ,SPECTROMETRY - Abstract
Purpose: This study develops a tracer kinetic model of xenon uptake in the human brain to determine the transfer rate of inhaled hyperpolarized 129Xe from cerebral blood to gray matter that accounts for the effects of cerebral physiology, perfusion and magnetization dynamics. The 129Xe transfer rate is expressed using a tracer transfer coefficient, which estimates the quantity of hyperpolarized129Xe dissolved in cerebral blood under exchange with depolarized129Xe dissolved in gray matter under equilibrium of concentration. Theory and Methods: Time‐resolved MR spectra of hyperpolarized 129Xe dissolved in the human brain were acquired from three healthy volunteers. Acquired spectra were numerically fitted with five Lorentzian peaks in accordance with known 129Xe brain spectral peaks. The signal dynamics of spectral peaks for gray matter and red blood cells were quantified, and correction for the 129Xe T1 dependence upon blood oxygenation was applied. 129Xe transfer dynamics determined from the ratio of the peaks for gray matter and red blood cells was numerically fitted with the developed tracer kinetic model. Results: For all the acquired NMR spectra, the developed tracer kinetic model fitted the data with tracer transfer coefficients between 0.1 and 0.14. Conclusion: In this study, a tracer kinetic model was developed and validated that estimates the transfer rate of HP 129Xe from cerebral blood to gray matter in the human brain. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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18. Does the removal of non-photosynthetic sections lead to a down-regulation of photosynthesis in mosses? A first experiment.
- Author
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Zhe WANG, BADER, Maaike Y., Chunyan PI, Yunyu HE, Shuiliang GUO, and Weikai BAO
- Subjects
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MOSSES , *PHOTOSYNTHETIC rates , *ECOPHYSIOLOGY - Abstract
When measuring photosynthesis in mosses, the non-photosynthetic (brown) sections are usually removed and only the green sections are measured. However, how this pretreatment affects photosynthesis rates is unclear. Therefore, we studied the effect of removing the non-photosynthetic sections in three moss species with distinct morphological and stem-anatomical structures, comparing net CO2 assimilation rates (AN) of detached green and brown sections to those of intact shoots. Right after separation, the summed AN of the separated sections was significantly lower than those of the intact shoots for Pogonatum nudiusculum Mitt. and Pleuroziopsis ruthenica (Weinm.) Kindb. ex E. Britton, while no significant difference was found for Actinothuidium hookeri (Mitt.) Broth. However, AN recovered within a day, and the progressive reduction of AN expected if carbonsink removal was an important mechanism was not observed. Our study indicates that removal of non-photosynthetic sections results in an underestimation of the photosynthetic capacity of the green moss sections, but only for the species with relatively complex internal transport structures, and only immediately after the separation. The fast and transient response suggests a mechanism via an electrical signal induced by wounding or reduced hydraulic integrity, rather than through a reduced carbon-sink strength. More comprehensive investigations on signaling and other mechanisms regulating moss photosynthesis will contribute to more accurate measurement methods as well as a deeper understanding of moss ecophysiology and the contribution of mosses to carbon fluxes in terrestrial ecosystems. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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19. The contribution of oceanic methyl iodide to stratospheric iodine
- Author
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Tegtmeier, S., Krüger, K., Quack, B., Atlas, E., Blake, D. R, Boenisch, H., Engel, A., Hepach, H., Hossaini, R., Navarro, M. A, Raimund, S., Sala, S., Shi, Q., and Ziska, F.
- Subjects
Particle Dispersion Model ,Tropical Atlantic-Ocean ,Marine Boundary-Layer ,Free Troposphere ,Photochemical Production ,Gaseous Iodine ,Gas-Exchange ,West Pacific ,Sea ,Transportland-use change ,soil-atmosphere exchange ,temperate forest soil ,nitrous-oxide fluxes ,trace gas fluxes ,colorado shortgrass steppe ,ch4 mixing ratios ,rice field soil ,carbon-dioxide ,methanotrophic bacteria - Published
- 2013
20. Global sea-to-air flux climatology for bromoform, dibromomethane and methyl iodide
- Author
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Ziska, F., Quack, B., Abrahamsson, K., Archer, S. D, Atlas, E., Bell, T., Butler, J. H, Carpenter, L. J, Jones, C. E, Harris, N. R. P, Hepach, H., Heumann, K. G, Hughes, C., Kuss, J., Krüger, K., Liss, P., Moore, R. M, Orlikowska, A., Raimund, S., Reeves, C. E, Reifenhäuser, W., Robinson, A. D, Schall, C., Tanhua, T., Tegtmeier, S., Turner, S., Wang, L., Wallace, D., Williams, J., Yamamoto, H., Yvon-Lewis, S., and Yokouchi, Y.
- Subjects
Marine Boundary-Layer ,Halogenated Organic-Compounds ,Tropical Tropopause Layer ,Atlantic-Ocean ,Wind-Speed ,Photochemical Production ,Phytoplankton Cultures ,Stratospheric Bromine ,Ozone Depletion ,Gas-Exchange - Published
- 2013
21. Non‐targeted 13C metabolite analysis demonstrates broad re‐orchestration of leaf metabolism when gas exchange conditions vary.
- Author
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Abadie, Cyril, Lalande, Julie, Limami, Anis M., and Tcherkez, Guillaume
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GAS exchange in plants , *BRANCHED chain amino acids , *KREBS cycle , *METABOLISM , *MOLE fraction , *SUNFLOWERS - Abstract
It is common practice to manipulate CO2 and O2 mole fraction during gas‐exchange experiments to suppress or exacerbate photorespiration, or simply carry out CO2 response curves. In doing so, it is implicitly assumed that metabolic pathways other than carboxylation and oxygenation are altered minimally. In the past few years, targeted metabolic analyses have shown that this assumption is incorrect, with changes in the tricarboxylic acid cycle, anaplerosis (phosphoenolpyruvate carboxylation), and nitrogen or sulphur assimilation. However, this problem has never been tackled systematically using non‐targeted analyses to embrace all possible affected metabolic pathways. Here, we exploited combined NMR, GC–MS, and LC–MS data and conducted non‐targeted analyses on sunflower leaves sampled at different O2/CO2 ratios in a gas exchange system. The statistical analysis of nearly 4,500 metabolic features not only confirms previous findings on anaplerosis or S assimilation, but also reveals significant changes in branched chain amino acids, phenylpropanoid metabolism, or adenosine turn‐over. Noteworthy, all of these pathways involve CO2 assimilation or liberation and thus affect net CO2 exchange. We conclude that manipulating CO2 and O2 mole fraction has a broad effect on metabolism, and this must be taken into account to better understand variations in carboxylation (anaplerotic fixation) or apparent day respiration. It is generally assumed that metabolic pathways other than carboxylation and oxygenation are altered minimally by changing CO2 and O2 conditions during gas exchange. Using isotope‐assisted metabolomics analyses, we show that manipulating CO2 and O2 has a broad effect on different major metabolic pathways, and this must be taken into to better interpret variations in carboxylation (anaplerotic fixation) or apparent day respiration. [ABSTRACT FROM AUTHOR]
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- 2021
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22. A multiplexed gas exchange system for increased throughput of photosynthetic capacity measurements
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William T. Salter, Matthew E. Gilbert, and Thomas N. Buckley
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Phenotyping ,Photosynthesis ,High-throughput ,Gas-exchange ,Photosynthetic capacity ,A max ,Plant culture ,SB1-1110 ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Existing methods for directly measuring photosynthetic capacity (A max) have low throughput, which creates a key bottleneck for pre-breeding and ecological research. Currently available commercial leaf gas exchange systems are not designed to maximize throughput, on either a cost or time basis. Results We present a novel multiplexed semi-portable gas exchange system, OCTOflux, that can measure A max with approximately 4–7 times the throughput of commercial devices, despite a lower capital cost. The main time efficiency arises from having eight leaves simultaneously acclimate to saturating CO2 and high light levels; the long acclimation periods for each leaf (13.8 min on average in this study) thus overlap to a large degree, rather than occurring sequentially. The cost efficiency arises partly from custom-building the system and thus avoiding commercial costs like distribution, marketing and profit, and partly from optimizing the system’s design for A max throughput rather than flexibility for other types of measurements. Conclusion Throughput for A max measurements can be increased greatly, on both a cost and time basis, by multiplexing gas streams from several leaf chambers connected to a single gas analyzer. This can help overcome the bottleneck in breeding and ecological research posed by limited phenotyping throughput for A max.
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- 2018
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23. Ship-based measurement of air-sea CO 2 exchange by eddy covariance
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Miller, Scott D, Marandino, Christa A, and Saltzman, Eric S
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frequency-response corrections ,flux measurements ,gas-exchange ,correlation systems ,sampling tubes ,open-path ,ocean ,wind ,fluctuations ,turbulence - Abstract
A system for the shipboard measurement of air-sea CO2 fluxes by eddy covariance was developed and tested. The system was designed to reduce two major sources of experimental uncertainty previously reported. First, the correction for in situ water vapor fluctuations (the “Webb” correction) was reduced by 97% by drying the air sample stream. Second, motion sensitivity of the gas analyzer was reduced by using an open-path type sensor that was converted to a closed-path configuration to facilitate drying of the air stream. High-quality CO2 fluxes were obtained during 429 14 min flux intervals during two cruises in the North Atlantic. The results suggest that the gas analyzer resolved atmospheric CO2 fluctuations well below its RMS noise level. This noise was uncorrelated with the vertical wind and therefore filtered out by the flux calculation. Using climatological data, we estimate that the techniques reported here could enable high-quality measurements of air-sea CO2 flux over much of the world oceans.
- Published
- 2010
24. Physiological, Biochemical, and Biometrical Response of Cultivated Strawberry and Wild Strawberry in Greenhouse Gutter Cultivation in the Autumn-Winter Season in Poland—Preliminary Study
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Justyna Lema-Rumińska, Dariusz Kulus, Alicja Tymoszuk, Natalia Miler, Anita Woźny, and Anna Wenda-Piesik
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Fragaria × ananassa ,Fragaria vesca ,anthocyanins ,carotenoids ,chlorophylls ,gas-exchange ,Agriculture - Abstract
Strawberry and wild strawberry are among the most popular horticultural crops. Due to the development of soilless cultivation systems, the whole-year production of these economically important fruit crops is achievable even in countries with temperate climate. However, the responses of strawberry (Fragaria × ananassa Duch.) and wild strawberry (Fragaria vesca L.) to microclimate conditions in greenhouse gutter cultivation in the autumn–winter season in Poland have not been yet determined. The aim of this study was to analyze the physiological, biochemical, and biometrical responses of two cultivars of strawberry ‘Ostara’ and ‘San Andreas’ and two cultivars of wild strawberry ‘Baron von Solemacher’ and ‘Regina’ grown for 20 weeks, starting from September 17th, in controlled greenhouse conditions on coconut mats in gutters in the autumn–winter season and irradiated with sodium lamps. Strawberry ‘San Andreas’ produced 30% larger leaves and almost three-fold higher fresh and dry weight of biomass than ‘Ostara’. The strawberry plants ‘San Andreas’ had a higher content (20%) of chlorophyll a and 30% of chlorophyll b than ‘Ostara’ plants. Generally, ‘San Andreas’ displayed an overall higher concentration of intercellular CO2 (about 14%) than ‘Ostara’ plants providing higher gas exchange processes. Photosynthetic rate amounted to 13.0 μmol·m−2·s−1 for ‘San Andreas’ that was almost two-fold higher than for ‘Ostara’. ‘San Andreas’ flower and fruit productions were uniform and the six-fold higher individual fruit yield proved the excellent attributes of this cultivar to the greenhouse cultivation. Even though the productivity of the two studied wild strawberry cultivars was similar, ‘Regina’ showed higher values of some parameters than ‘Baron von Solemacher’ (40% larger leaves, 25% higher photosynthetic rate, 10% higher concentration of intercellular CO2). A high nutritional value of fruits is maintained compared to traditional open-air cultivation.
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- 2021
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25. Response of a grassland species to dry environmental conditions from water stable isotopic monitoring: no evident shift in root water uptake to wetter soil layers
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Paulina Alejandra Deseano Diaz, Dagmar van Dusschoten, Angelika Kübert, Nicolas Brüggemann, Mathieu Javaux, Steffen Merz, Jan Vanderborght, Harry Vereecken, Maren Dubbert, Youri Rothfuss, and UCL - SST/ELI/ELIE - Environmental Sciences
- Subjects
DYNAMICS ,Science & Technology ,Drought ,PHOTOSYNTHESIS ,FRACTIONATION ,Plant Sciences ,RATHER ,Non-destructive monitoring ,Water stable isotopes ,Soil Science ,Agriculture ,Plant Science ,Agronomy ,VARIABILITY ,ddc:580 ,Root water uptake ,DEFICITS ,DEPTH ,PLANTS ,Life Sciences & Biomedicine ,Centaurea jacea ,GAS-EXCHANGE - Abstract
Aims We aimed at assessing the influence of above- and below-ground environmental conditions over the performance of Centaurea jacea L., a drought-resistant grassland forb species. Methods Transpiration rate, CO2 assimilation rate, leaf water potential, instantaneous and intrinsic water use efficiency, temperature, relative humidity, vapor pressure deficit and soil water content in one plant and root length density in four plants, all grown in custom-made columns, were monitored daily for 87 days in the lab. The soil water isotopic composition in eleven depths was recorded daily in a non-destructive manner. The isotopic composition of plant transpiration was inferred from gas chamber measurements. Vertical isotopic gradients in the soil column were created by adding labeled water. Daily root water uptake (RWU) profiles were computed using the multi-source mixing model Stable Isotope Analysis in R (Parnell et al. PLoS ONE 5(3):1–5, 2010). Results RWU occurred mainly in soil layer 0–15 cm, ranging from 79 to 44%, even when water was more easily available in deeper layers. In wet soil, the transpiration rate was driven mainly by vapor pressure deficit and light intensity. Once soil water content was less than 0.12 cm3 cm− 3, the computed canopy conductance declined, which restricted leaf gas exchange. Leaf water potential dropped steeply to around − 3 MPa after soil water content was below 0.10 cm3 cm− 3. Conclusion Our comprehensive data set contributes to a better understanding of the effects of drought on a grassland species and the limits of its acclimation in dry conditions.
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- 2022
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26. Methane Emissions in Seagrass Meadows as a Small Offset to Carbon Sequestration
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Yau, Y. Y. Y., Reithmaier, G., Majtenyi-Hill, C., Serrano, O., Pineiro-Juncal, N., Dahl, Martin, Mateo, M. A., Bonaglia, S., Santos, I. R., Yau, Y. Y. Y., Reithmaier, G., Majtenyi-Hill, C., Serrano, O., Pineiro-Juncal, N., Dahl, Martin, Mateo, M. A., Bonaglia, S., and Santos, I. R.
- Abstract
Seagrass meadows are effective carbon sinks due to high primary production and sequestration in sediments. However, methane (CH4) emissions can partially counteract their carbon sink capacity. Here, we measured diffusive sediment-water and sea-air CO2 and CH4 fluxes in a coastal embayment dominated by Posidonia oceanica in the Mediterranean Sea. High-resolution timeseries observations revealed large spatial and temporal variability in CH4 concentrations (2-36 nM). Lower sea-air CH4 emissions were observed in an area with dense seagrass meadows compared to patchy seagrass. A 6%-40% decrease of CH4 concentration in the surface water around noon indicates that photosynthesis likely limits CH4 fluxes. Sediments were the major CH4 source as implied from radon (a natural porewater tracer) observations and evidence for methanogenesis in deeper sediments. CH4 sediment-water fluxes (0.1 +/- 0.1-0.4 +/- 0.1 mu mol m(-2) d(-1)) were higher than average sea-air CH4 emissions (0.12 +/- 0.10 mu mol m(-2) d(-1)), suggesting that dilution and CH4 oxidation in the water column could reduce net CH4 fluxes into the atmosphere. Overall, relatively low sea-air CH4 fluxes likely represent the net emissions from subtidal seagrass habitat not influenced by allochthonous CH4 sources. The local CH4 emissions in P. oceanica can offset less than 1% of the carbon burial in sediments (142 +/- 69 g CO2eq m(-2) yr(-1)). Combining our results with earlier observations in other seagrass meadows worldwide reveals that global CH4 emissions only offset a small fraction (<2%) of carbon sequestration in sediments from seagrass meadows. Plain Language Summary Seagrass meadows are hotspots for marine carbon storage in sediments. Part of the sediment carbon can be released as carbon dioxide and methane (CH4). Methane has 45-96 times more powerful global warming effect than carbon dioxide. If seagrass meadows release CH4, the emissions counteract their climate mitigation potential. We measured greenhouse
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- 2023
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27. High metabolism and periodic hypoxia associated with drifting macrophyte detritus in the shallow subtidal Baltic Sea
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Karl M. Attard, Anna Lyssenko, Iván F. Rodil, Tvärminne Benthic Ecology Team, Marine Ecosystems Research Group, and Biological stations
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Flux ,Fate ,1181 Ecology, evolutionary biology ,Responses ,Sediment ,Eddy covariance ,Oxygen dynamics ,Coastal hypoxia ,Gas-exchange ,Fjord ,Ecology, Evolution, Behavior and Systematics ,Earth-Surface Processes - Abstract
Macrophytes form highly productive habitats that export a substantial proportion of their primary production as particulate organic matter. As the detritus drifts with currents and accumulates in seafloor depressions, it constitutes organic enrichment and can deteriorate O2 conditions on the seafloor. In this study, we investigate the O2 dynamics and macrobenthic biodiversity associated with a shallow ∼ 2300 m2 macrophyte detritus field in the northern Baltic Sea. The detritus, primarily Fucus vesiculosus fragments, had a biomass of ∼ 1700 g dry weight m−2, approximately 1.5 times larger than nearby intact F. vesiculosus canopies. A vertical array of O2 sensors placed within the detritus documented that hypoxia ([O2] < 63 µmol L−1) occurred for 23 % of the time and terminated at the onset of wave-driven hydrodynamic mixing. Measurements in five other habitats nearby, spanning bare sediments, seagrass, and macroalgae, indicate that hypoxic conditions were unique to detritus canopies. Fast-response O2 sensors placed above the detritus documented pulses of hypoxic waters originating from within the canopy. These pulses triggered a rapid short-term (∼ 5 min) deterioration of O2 conditions within the water column. Eddy covariance measurements of O2 fluxes indicated high metabolic rates, with daily photosynthetic production offsetting up to 81 % of the respiratory demands of the detritus canopy, prolonging its persistence within the coastal zone. The detritus site had a low abundance of crustaceans, bivalves, and polychaetes when compared to other habitats nearby, likely because their low O2 tolerance thresholds were often exceeded.
- Published
- 2023
28. Direct evidence for modulation of photosynthesis by an arbuscular mycorrhiza‐induced carbon sink strength.
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Gavito, Mayra E., Jakobsen, Iver, Mikkelsen, Teis N., and Mora, Francisco
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- *
VESICULAR-arbuscular mycorrhizas , *CARBON cycle , *PHOTOSYNTHETIC rates , *PHOTOSYNTHESIS , *FUNGAL metabolism , *MYCORRHIZAL plants - Abstract
Summary: It has been suggested that plant carbon (C) use by symbiotic arbuscular mycorrhizal fungi (AMF) may be compensated by higher photosynthetic rates because fungal metabolism creates a strong C sink that prevents photosynthate accumulation and downregulation of photosynthesis. This mechanism remains largely unexplored and lacks experimental evidence.We report here two experiments showing that the experimental manipulation of the mycorrhizal C sink significantly affected the photosynthetic rates of cucumber host plants. We expected that a sudden reduction in sink strength would cause a significant reduction in photosynthetic rates, at least temporarily.Excision of part of the extraradical mycorrhizal mycelium from roots, and causing no disturbance to the plant, induced a sustained (10–40%) decline in photosynthetic rates that lasted from 30 min to several hours in plants that were well‐nourished and hydrated, and in the absence of growth or photosynthesis promotion by mycorrhizal inoculation. This effect was though minor in plants growing at high (700 ppm) atmospheric CO2.This is the first direct experimental evidence for the C sink strength effects exerted by arbuscular mycorrhizal symbionts on plant photosynthesis. It encourages further experimentation on mycorrhizal source–sink relations, and may have strong implications in large‐scale assessments and modelling of plant photosynthesis. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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29. Sunflecks in the upper canopy: dynamics of light‐use efficiency in sun and shade leaves of Fagus sylvatica
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Maxime Durand, Zsofia R. Stangl, Yann Salmon, Alexandra J. Burgess, Erik H. Murchie, T. Matthew Robson, Canopy Spectral Ecology and Ecophysiology, Organismal and Evolutionary Biology Research Programme, University of Helsinki, Department of Forest Sciences, Institute for Atmospheric and Earth System Research (INAR), Viikki Plant Science Centre (ViPS), Micrometeorology and biogeochemical cycles, and Ecosystem processes (INAR Forest Sciences)
- Subjects
sun and shade leaves ,STEADY-STATE ,Fagus sylvatica ,Physiology ,MESOPHYLL CONDUCTANCE ,TROPICAL RAIN-FOREST ,canopy vertical gradients ,FLUCTUATING LIGHT ,photosynthetic induction ,stomatal dynamics ,Plant Science ,11831 Plant biology ,Trees ,Plant Leaves ,sunfleck ,ENERGY-DISSIPATION ,VERTICAL GRADIENT ,Fagus ,Sunlight ,Photosynthesis ,PIGMENT COMPOSITION ,STOMATAL RESPONSES ,provenance trial ,GAS-EXCHANGE - Abstract
Sunflecks are transient patches of direct radiation that provide a substantial proportion of the daily irradiance to leaves in the lower canopy. In this position, faster photosynthetic induction would allow for higher sunfleck-use efficiency, as is commonly reported in the literature. Yet, when sunflecks are too few and far between, it may be more beneficial for shade leaves to prioritize efficient photosynthesis under shade. We investigated the temporal dynamics of photosynthetic induction, recovery under shade, and stomatal movement during a sunfleck, in sun and shade leaves of Fagus sylvatica from three provenances of contrasting origin. We found that shade leaves complete full induction in a shorter time than sun leaves, but that sun leaves respond faster than shade leaves due to their much larger amplitude of induction. The core-range provenance achieved faster stomatal opening in shade leaves, which may allow for better sunfleck-use efficiency in denser canopies and lower canopy positions. Our findings represent a paradigm shift for future research into light fluctuations in canopies, drawing attention to the ubiquitous importance of sunflecks for photosynthesis, not only in lower-canopy leaves where shade is prevalent, but particularly in the upper canopy where longer sunflecks are more common due to canopy openness.
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- 2022
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30. Mimicking biofilms: Photosynthetic assessments of C. reinhardtii in 3 physical forms
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Roesgen, John Michael
- Subjects
- biofilm, gas-exchange, photosynthesis, silica sol-gel, carbon concentrating mechanism, Biology, Organismal Biological Physiology, Plant Biology
- Abstract
Oxygenic photosynthesis supports the majority of life on Earth through the capture of energy from sunlight and the assimilation of CO2 into basic building blocks of cells. Microalgae are fast growing and account for about half of global photosynthesis. In addition, they can be cultivated and their metabolism can be redirected to generate additional useful products ranging from biofuels to pharmaceuticals. However, the efficiency of metabolite production is severely impacted by the slow diffusion of CO2 through water and the high energetic costs of harvesting microalgae from liquid cultures. Microalgae grow in open water, but they also form biofilms that require less energy to harvest. However, the impact of these different growth forms on rates of photosynthesis is poorly understood. The work in this dissertation explores the importance of growth form on photosynthesis by examining CO2 assimilation of the green microalga, Chlamydomonas reinhardtii, within three different states: as a liquid suspension, as a simple filtered two-dimensional artificial biofilm, and within a silica sol-gel encapsulation matrix as an example of a more complex biofilm. The rates of CO2 assimilation were decreased within the simple filtered biofilm and further decreased within the silica sol-gel matrix. The decrease is thought to be due to the diffusional limitations to CO2 imposed by the biofilm forms. Estimated rates of assimilation of CO2 were also calculated from chlorophyll fluorescence values of both biofilms and were more similar to the measured liquid suspension rates, suggesting a persistent energetic imbalance between light and CO2 capture in biofilms. This effort required development of new empirical corrections to correctly assess CO2 exchange rates, and novel approaches to collect data that could be directly compared between the three forms.
- Published
- 2023
31. Novel 129Xe Magnetic Resonance Imaging and Spectroscopy Measurements of Pulmonary Gas-Exchange
- Author
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Matheson, Alexander M
- Subjects
129Xe MRI ,Hyperpolarized Gas ,Respiratory System ,Biophysics ,Medical Biophysics ,Long-COVID ,Magnetic Resonance Imaging ,Gas-exchange ,Pulmonary Vasculature - Abstract
Gas-exchange is the primary function of the lungs and involves removing carbon dioxide from the body and exchanging it within the alveoli for inhaled oxygen. Several different pulmonary, cardiac and cardiovascular abnormalities have negative effects on pulmonary gas-exchange. Unfortunately, clinical tests do not always pinpoint the problem; sensitive and specific measurements are needed to probe the individual components participating in gas-exchange for a better understanding of pathophysiology, disease progression and response to therapy. In vivo Xenon-129 gas-exchange magnetic resonance imaging (129Xe gas-exchange MRI) has the potential to overcome these challenges. When participants inhale hyperpolarized 129Xe gas, it has different MR spectral properties as a gas, as it diffuses through the alveolar membrane and as it binds to red-blood-cells. 129Xe MR spectroscopy and imaging provides a way to tease out the different anatomic components of gas-exchange simultaneously and provides spatial information about where abnormalities may occur. In this thesis, I developed and applied 129Xe MR spectroscopy and imaging to measure gas-exchange in the lungs alongside other clinical and imaging measurements. I measured 129Xe gas-exchange in asymptomatic congenital heart disease and in prospective, controlled studies of long-COVID. I also developed mathematical tools to model 129Xe MR signals during acquisition and reconstruction. The insights gained from my work underscore the potential for 129Xe gas-exchange MRI biomarkers towards a better understanding of cardiopulmonary disease. My work also provides a way to generate a deeper imaging and physiologic understanding of gas-exchange in vivo in healthy participants and patients with chronic lung and heart disease.
- Published
- 2023
32. Coupled Gas-Exchange Model for C4 Leaves Comparing Stomatal Conductance Models
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Kyungdahm Yun, Dennis Timlin, and Soo-Hyung Kim
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gas-exchange ,C4 photosynthesis ,stomatal conductance ,Ball–Berry ,Medlyn ,Botany ,QK1-989 - Abstract
Plant simulation models are abstractions of plant physiological processes that are useful for investigating the responses of plants to changes in the environment. Because photosynthesis and transpiration are fundamental processes that drive plant growth and water relations, a leaf gas-exchange model that couples their interdependent relationship through stomatal control is a prerequisite for explanatory plant simulation models. Here, we present a coupled gas-exchange model for C4 leaves incorporating two widely used stomatal conductance submodels: Ball–Berry and Medlyn models. The output variables of the model includes steady-state values of CO2 assimilation rate, transpiration rate, stomatal conductance, leaf temperature, internal CO2 concentrations, and other leaf gas-exchange attributes in response to light, temperature, CO2, humidity, leaf nitrogen, and leaf water status. We test the model behavior and sensitivity, and discuss its applications and limitations. The model was implemented in Julia programming language using a novel modeling framework. Our testing and analyses indicate that the model behavior is reasonably sensitive and reliable in a wide range of environmental conditions. The behavior of the two model variants differing in stomatal conductance submodels deviated substantially from each other in low humidity conditions. The model was capable of replicating the behavior of transgenic C4 leaves under moderate temperatures as found in the literature. The coupled model, however, underestimated stomatal conductance in very high temperatures. This is likely an inherent limitation of the coupling approaches using Ball–Berry type models in which photosynthesis and stomatal conductance are recursively linked as an input of the other.
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- 2020
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33. Physiological and fitness response of flowers to temperature and water augmentation in a high Andean geophyte.
- Author
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Dudley, Leah S., Arroyo, Mary T.K., and Fernández-Murillo, M.P.
- Subjects
- *
FLOWERS , *PLANT transpiration , *GAS exchange in plants , *CLIMATE change , *PHYSIOLOGY , *PLANT reproduction - Abstract
Flowers are likely to be under various selective pressures not limited to reproduction and resource trade-offs. Here, we investigate the physiological responses (conductance, transpiration and respiration) of flowers under augmented temperature and supplemental watering, link these responses to actual flower longevity, and search for evidence of adaptive plasticity. Flower maintenance costs and plant fitness were investigated using the Andean geophyte, Rhodolirium montanum , in a manipulative field experiment. Maintenance determined by gas exchange was measured on fully expanded tepals; along with flower duration and its components, opening and closing. Fitness measured by fruit and seed production and seed set (mature/total) was examined. We artificially increased temperature and supplementally watered plants. Our study showed that flower longevity decreased under drier conditions, but the effect on flower opening and closing was even stronger, both of which advanced under higher temperatures without supplemental watering. Gas exchange also decreased, limiting water loss, under drier, warmer conditions. Those plants that reduced flower longevity under warming had higher total seed production and seed set. Plants that reduced conductance under warmed conditions also had higher seed set. These results suggest that plants are plastically optimizing fitness by reducing flower maintenance costs. Possible flower longevity and fitness connotations of our results under climate change are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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34. Changes in yield, growth and photosynthesis in a drought-adapted Mediterranean tomato landrace (Solanum lycopersicum ‘Ramellet’) when grafted onto commercial rootstocks and Solanum pimpinellifolium.
- Author
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Fullana-Pericàs, Mateu, Ponce, Joan, Conesa, Miquel À., Juan, Andreu, Ribas-Carbó, Miquel, and Galmés, Jeroni
- Subjects
- *
TOMATO yields , *ELONGATION factors (Biochemistry) , *HORTICULTURAL crops , *GAS exchange in plants ,PHOTOSYNTHESIS genetics - Abstract
Although grafting has become an effective tool to enhance many traits in horticultural crops, its role in improving the performance of local landraces is yet to be proven. The aim of this work was to assess the performance of the ‘Ramellet’ tomato, a landrace from the Balearic Islands, when grafted onto different rootstocks. For this purpose, two ‘Ramellet’ genotypes were grafted on two commercial (‘Beaufort’ and ‘Maxifort’) and a wild ( Solanum pimpinellifolium ) tomato rootstock species, and cultivated in greenhouse under commercial conditions. Plant yield, morphology and photosynthetic traits were measured in all combinations, with non-grafted and self-grafted ‘Ramellet’ plants used as controls. A significant effect of the rootstock on key parameters related to yield, plant growth and photosynthesis was found in both ‘Ramellet’ genotypes. Stomatal conductance increased, resulting in a decreased water-use efficiency in both genotypes grafted on the commercial rootstocks. Oppositely, when grafted on S. pimpinellifolium , stomatal conductance decreased and water-use efficiency increased in one of the ‘Ramellet’ genotypes. Remarkably, there was a significant correlation between water-use efficiency, plant growth and yield. Overall, the results highlight the potential of grafting to alter several physiological traits of local landraces and to provide new clues towards advancing our understanding in the underlying determinants of water-use efficiency and plant yield. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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35. Microstructural changes enhance oxygen transport in tomato ( Solanum lycopersicum ) fruit during maturation and ripening
- Author
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Suzane Pols, Bart Nicolai, Pieter Verboven, Hui Xiao, and Agnese Piovesan
- Subjects
Ethylene ,Physiology ,microstructure ,maturation and ripening ,Plant Science ,tomato ,Thermal diffusivity ,CELL EXPANSION ,chemistry.chemical_compound ,Solanum lycopersicum ,Gene Expression Regulation, Plant ,Respiration ,oxygen diffusivity ,Plant Proteins ,Science & Technology ,DIVISION ,intercellular pore ,biology ,hypoxia ,Plant Sciences ,DEATH ,Oxygen transport ,food and beverages ,Ripening ,X-Ray Microtomography ,GRAPE BERRIES ,Ethylenes ,cell ,PEAR FRUIT ,biology.organism_classification ,DIFFUSION ,Oxygen ,MODEL ,RESPIRATION ,chemistry ,Fruit ,Biophysics ,GROWTH ,Solanum ,Respiration rate ,Climacteric ,Life Sciences & Biomedicine ,X-ray micro-computed tomography ,GAS-EXCHANGE - Abstract
Climacteric ripening of tomato fruit is initiated by a characteristic surge of the production rate of ethylene, accompanied by an increase in respiration rate. As both activities consume O2 and produce CO2 , gas concentration gradients develop in the fruit that cause diffusive transport. This may, in turn, affect respiration and ethylene biosynthesis. Gas diffusion in fruit depends on the amount and connectivity of cells and intercellular spaces in 3D. We investigated micromorphological changes in different tomato tissues during development and ripening by visualizing cells and pores based on high-resolution micro-computed tomography, and computed effective O2 diffusivity coefficients based on microstructural features of the tissues. We demonstrated that mesocarp and septa tissues have larger cells but small and more disconnected pores than the placenta and columella, resulting in relatively lower effective O2 diffusivity coefficients. Cell disintegration occurred in the mesocarp and septa during ripening, indicating lysigenous air pore formation and resulting in a gradual increase of the effective O2 diffusivity. The results suggest that hypoxic conditions caused by the increasing size and, hence, diffusion resistance of the growing fruit may induce an increase of tissue porosity that results in a greatly enhanced O2 diffusivity and, thus, helps to alleviate them. ispartof: NEW PHYTOLOGIST vol:232 issue:5 pages:2043-2056 ispartof: location:England status: published
- Published
- 2021
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36. Comparison of particle number size distribution trends in ground measurements and climate models
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Leinonen, Ville, Kokkola, Harri, Yli-Juuti, Taina, Mielonen, Tero, Kühn, Thomas, Nieminen, Tuomo, Heikkinen, Simo, Miinalainen, Tuuli, Bergman, Tommi, Carslaw, Ken, Decesari, Stefano, Fiebig, Markus, Hussein, Tareq, Kivekäs, Niku, Krejci, Radovan, Kulmala, Markku, Leskinen, Ari, Massling, Andreas, Mihalopoulos, Nikos, Mulcahy, Jane P., Noe, Steffen M., van Noije, Twan, O'Connor, Fiona M., O'Dowd, Colin, Olivie, Dirk, Pernov, Jakob B., Petäjä, Tuukka, Seland, Øyvind, Schulz, Michael, Scott, Catherine E., Skov, Henrik, Swietlicki, Erik, Tuch, Thomas, Wiedensohler, Alfred, Virtanen, Annele, Mikkonen, Santtu, Global Atmosphere-Earth surface feedbacks, Institute for Atmospheric and Earth System Research (INAR), and Air quality research group
- Subjects
SECTIONAL AEROSOL MODULE ,1171 Geosciences ,GLOBAL ANALYSIS ,WIND-SPEED ,LONG-TERM ,ATMOSPHERIC AEROSOL ,SULFUR EMISSIONS ,DECADAL TRENDS ,ORGANIC AEROSOL ,114 Physical sciences ,LIFE-CYCLE ,1172 Environmental sciences ,GAS-EXCHANGE - Abstract
Despite a large number of studies, out of all drivers of radiative forcing, the effect of aerosols has the largest uncertainty in global climate model radiative forcing estimates. There have been studies of aerosol optical properties in climate models, but the effects of particle number size distribution need a more thorough inspection. We investigated the trends and seasonality of particle number concentrations in nucleation, Aitken, and accumulation modes at 21 measurement sites in Europe and the Arctic. For 13 of those sites, with longer measurement time series, we compared the field observations with the results from five climate models, namely EC-Earth3, ECHAM-M7, ECHAM-SALSA, NorESM1.2, and UKESM1. This is the first extensive comparison of detailed aerosol size distribution trends between in situ observations from Europe and five earth system models (ESMs). We found that the trends of particle number concentrations were mostly consistent and decreasing in both measurements and models. However, for many sites, climate models showed weaker decreasing trends than the measurements. Seasonal variability in measured number concentrations, quantified by the ratio between maximum and minimum monthly number concentration, was typically stronger at northern measurement sites compared to other locations. Models had large differences in their seasonal representation, and they can be roughly divided into two categories: for EC-Earth and NorESM, the seasonal cycle was relatively similar for all sites, and for other models the pattern of seasonality varied between northern and southern sites. In addition, the variability in concentrations across sites varied between models, some having relatively similar concentrations for all sites, whereas others showed clear differences in concentrations between remote and urban sites. To conclude, although all of the model simulations had identical input data to describe anthropogenic mass emissions, trends in differently sized particles vary among the models due to assumptions in emission sizes and differences in how models treat size-dependent aerosol processes. The inter-model variability was largest in the accumulation mode, i.e. sizes which have implications for aerosol-cloud interactions. Our analysis also indicates that between models there is a large variation in efficiency of long-range transportation of aerosols to remote locations. The differences in model results are most likely due to the more complex effect of different processes instead of one specific feature (e.g. the representation of aerosol or emission size distributions). Hence, a more detailed characterization of microphysical processes and deposition processes affecting the long-range transport is needed to understand the model variability.
- Published
- 2022
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37. Salinity, waterlogging, and elevated [CO2] interact to induce complex responses in cultivated and wild tomato
- Author
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Rong Zhou, Xiaqing Yu, Xiaoming Song, Eva Rosenqvist, Hongjian Wan, and Carl-Otto Ottosen
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Chlorophyll ,Salinity ,phenotyping ,Physiology ,Plant Science ,tomato ,Solanum ,salinity ,Solanum lycopersicum ,LEAVES ,PLANTS ,Photosynthesis ,COMBINATION ,TEMPERATURE ,DROUGHT ,PHOTOSYNTHESIS ,fungi ,Combined stress ,SALT ,food and beverages ,elevated CO2 concentration ,Carbon Dioxide ,Plant Leaves ,waterlogging ,multivariate analysis ,STRESSES ,GROWTH ,GAS-EXCHANGE - Abstract
The effects of individual climatic factors on crops are well documented, whereas the interaction of such factors in combination has received less attention. The frequency of salinity and waterlogging stress is increasing with climate change, accompanied by elevated CO2 concentration (e[CO2]). This study explored how these three variables interacted and affected two tomato genotypes. Cultivated and wild tomato (Solanum lycopersicum and Solanum pimpinellifolium) were grown at ambient [CO2] and e[CO2], and subjected to salinity, waterlogging, and combined stress. Leaf photosynthesis, chlorophyll fluorescence, quenching analysis, pigment, and plant growth were analyzed. The response of tomatoes depended on both genotype and stress type. In cultivated tomato, photosynthesis was inhibited by salinity and combined stress, whereas in wild tomato, both salinity and waterlogging stress, alone and in combination, decreased photosynthesis. e[CO2] increased photosynthesis and biomass of cultivated tomato under salinity and combined stress compared with ambient [CO2]. Differences between tomato genotypes in response to individual and combined stress were observed in key photosynthetic and growth parameters. Hierarchical clustering and principal component analysis revealed genetic variations of tomatoes responding to the three climatic factors. Understanding the interacting effects of salinity and waterlogging with e[CO2] in tomato will facilitate improvement of crop resilience to climate change.
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- 2022
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38. Carbon Dioxide Elimination During Veno-Venous Extracorporeal Membrane Oxygenation Weaning
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Anna Aliberti, Roberto Lorusso, Fiorenza Ferrari, Lars Mikael Broman, Mirko Belliato, Giorgio Antonio Iotti, Fabio Silvio Taccone, Maximilian V. Malfertheiner, Francesco Epis, Maria Giovanna Quattrone, Luca Cremascoli, CTC, MUMC+: MA Med Staf Spec CTC (9), and RS: Carim - V04 Surgical intervention
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Adult ,Male ,ARDS ,DEAD-SPACE ,medicine.medical_treatment ,Biomedical Engineering ,Biophysics ,Bioengineering ,Pilot Projects ,030204 cardiovascular system & hematology ,mechanical ventilation ,Pulmonary function testing ,veno-venous extracorporeal membrane oxygenation ,VOLUMETRIC CAPNOGRAPHY ,Biomaterials ,LESSONS ,03 medical and health sciences ,0302 clinical medicine ,Extracorporeal Membrane Oxygenation ,SUPPORT ,medicine ,Extracorporeal membrane oxygenation ,Weaning ,Humans ,Prospective Studies ,Lung ,extracorporeal membrane oxygenation weaning ,Aged ,Mechanical ventilation ,Respiratory Distress Syndrome ,business.industry ,General Medicine ,Carbon Dioxide ,Middle Aged ,acute respiratory distress syndrome ,medicine.disease ,extracorporeal carbon dioxide removal ,surgical procedures, operative ,medicine.anatomical_structure ,030228 respiratory system ,Respiratory failure ,Anesthesia ,Breathing ,Female ,ECMO ,business ,LUNG INJURY ,GAS-EXCHANGE - Abstract
Veno-venous extracorporeal membrane oxygenation (V-V ECMO) represents a component of the treatment strategy for severe respiratory failure. Clinical evidence on the management of the lung during V-V ECMO are limited just as the consensus regarding timing of weaning. The monitoring of the carbon dioxide (CO2) removal (V ' CO2TOT) is subdivided into two components: the membrane lung (ML) and the native lung (NL) are both taken into consideration to evaluate the improvement of the function of the lung and to predict the time to wean off ECMO. We enrolled patients with acute respiratory distress syndrome (ARDS). The V ' CO2NL ratio (V ' CO2NL/V ' CO2TOT) value was calculated based on the distribution of CO2 between the NL and the ML. Of 18 patients, 15 were successfully weaned off of V-V ECMO. In this subgroup, we observed a significant increase in the V ' CO2NL ratio comparing the median values of the first and last quartiles (0.32 vs. 0.53, p = 0.0045), without observing any modifications in the ventilation parameters. An increase in the V ' CO2NL ratio, independently from any change in ventilation could, despite the limitations of the study, indicate an improvement in pulmonary function and may be used as a weaning index for ECMO.
- Published
- 2021
39. Impacts of Climate and Tree Morphology on Tree-ring Stable Isotopes in Central Mongolia
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Caroline Leland, Laia Andreu-Hayles, Edward R Cook, Kevin J Anchukaitis, Oyunsanaa Byambasuren, Nicole Davi, Amy Hessl, Dario Martin-Benito, Baatarbileg Nachin, Neil Pederson, Leland, Caroline, Andreu-Hayles, Laia, Cook, Edward R., Anchukaitis, Kevin J., Byambasuren, Oyunsanaa, Davi, Nicole, Hessl, Amy, Martin-Benito, Dario, Nachin, Baatarbileg, and Pederson, Neil
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Stable carbon isotopes ,Central Asia ,Drought ,Physiology ,Stable oxygen isotopes ,Plant Science ,Gas-exchange ,Strip-bark - Abstract
Recent climate extremes in Mongolia have ignited a renewed interest in understanding past climate variability over centennial and longer time scales across north-central Asia. Tree-ring width records have been extensively studied in Mongolia as proxies for climate reconstruction, however, the climate and environmental signals of tree-ring stable isotopes from this region need to be further explored. Here, we evaluated a 182-year record of tree-ring δ13C and δ18O from Siberian Pine (Pinus sibirica Du Tour) from a xeric site in central Mongolia (Khorgo Lava) to elucidate the environmental factors modulating these parameters. First, we analyzed the climate sensitivity of tree-ring δ13C and δ18O at Khorgo Lava for comparison with ring-width records, which have been instrumental in reconstructing hydroclimate in central Mongolia over two millennia. We also compared stable isotope records of trees with partial cambial dieback ('strip-bark morphology'), a feature of long-lived conifers growing on resource-limited sites, and trees with a full cambium ('whole-bark morphology'), to assess the inferred leaf-level physiological behavior of these trees. We found that interannual variability in tree-ring δ13C and δ18O reflected summer hydroclimatic variability, and captured recent, extreme drought conditions, thereby complementing ring-width records. The tree-ring δ18O records also had a spring temperature signal and thus expanded the window of climate information recorded by these trees. Over longer time scales, strip-bark trees had an increasing trend in ring-widths, δ13C (and intrinsic water-use efficiency, iWUE) and δ18O, relative to whole-bark trees. Our results suggest that increases in iWUE at this site might be related to a combination of leaf-level physiological responses to increasing atmospheric CO2, recent drought, and stem morphological changes. Our study underscores the potential of stable isotopes for broadening our understanding of past climate in north-central Asia. However, further studies are needed to understand how stem morphological changes might impact stable isotopic trends.
- Published
- 2022
40. Response of photosynthesis and chlorophyll a fluorescence in leaf scald-infected rice under influence of rhizobacteria and silicon fertilizer.
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Bueno, A. C. S. O., Castro, G. L. S., Silva Junior, D. D., Pinheiro, H. A., Filippi, M. C. C., and Silva, G. B.
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- *
PHOTOSYNTHESIS , *FLUORESCENCE , *BURKHOLDERIA , *CHLOROPHYLL , *OXIDATIVE stress - Abstract
Leaf scald caused by Monographella albescens reduces the photosynthetic area, causing yield losses in rice. This study investigated the efficacy of the rhizobacteria Burkholderia pyrrocinia (BRM-32113) and Pseudomonas fluorescens (BRM-32111), combined with silicon (Si) fertilization, to reduce lesion size and the area under the disease progress curve (AUDPC), as well as to minimize the negative effects on gas exchange, chlorophyll a fluorescence, chlorophyll content and the activity of oxidative stress enzymes. The experiment used a completely randomized design with four replications and seven treatments. Compared with plants only fertilized with Si, plants fertilized with Si and treated with BRM-32113 showed reductions of 22% in scald lesion expansion and 37% in AUDPC, a 27% increase in the rate of CO2 assimilation ( A), a 33% decrease in the internal CO2 concentration ( Ci), and a 40% increase in ascorbate peroxidase activity. It was therefore concluded that the combination of BRM-32113 with Si fertilization reduces the severity of leaf scald, protecting the photosynthetic apparatus, thus representing a sustainable method of reducing the loss of income caused by leaf scald in rice. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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41. Effects of a hydrophilic polymer soil amendment on stress tolerance of Eucalyptus saligna.
- Author
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Dehkordi, Davoud
- Abstract
This study evaluated the effect of the hydrophilic polymer Super-AB-A-300 on salt and drought resistance in Eucalyptus saligna Sm. One-year-old cuttings of E. saligna were treated with salt (2 L of 300 mM NaCl), drought stress, and salt plus drought stress; an untreated set of cuttings was used as a control. All treatments were conducted with and without the Super-AB-A-300 polymer in the soil mixture. The Super-AB-A-300 polymer held more water in the soil during water-deficit conditions and promoted tolerance to salinity and drought stresses in the E. saligna rooted cuttings. In addition, the Super-AB-A-300 polymer retained Cl and Na in the soil solution due to its high water-holding capability and the exchangeable K in the Super-AB-A-300 resulted in an amended K /Na balance in the salt-treated plants. Furthermore, the Super-AB-A-300 polymer promoted greater resistance to salinity plus drought stresses, due to the salt- and water-holding capabilities of the polymer. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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42. EFFECT OF SUPERABSORBENT POLYMER ON SALT AND DROUGHT RESISTANCE OF EUCALYPTUS GLOBULUS.
- Author
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KHODADADI DEHKORDI, D.
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SUPERABSORBENT polymers ,SALT ,DROUGHT tolerance ,EUCALYPTUS globulus ,WATER in agriculture ,WATER efficiency - Abstract
In this study, the effect of Super-AB-A-200 polymer on salt and drought resistance of Eucalyptus globulus Labill. was evaluated. The treatments were: (1) Control, Control + polymer; (2) NaCl, NaCl+ polymer; (3) Drought, Drought + polymer; (4) Drought + NaCl, Drought + NaCl + polymer. The results showed that Super-AB-A-200 in root medium helped E. globulus cuttings to resist the salinity and drought stresses, because of the following reasons: (1) E. globulus roots absorbed the held water from Super-AB-A-200 polymer in soil water-deficit conditions; (2) in saline conditions, Super-AB-A-200 retained Cl
- and Na+ in the soil solution because of their high water-holding capability, moreover, the exchangeable K+ included in Super-AB-A-200 resulted in an amended K+ /Na+ balance in salinized plants; (3) Super-AB-A-200 helped E. globulus cuttings to resist interactive effects of salinity and drought stresses, which was essentially justified by their salt- and water-holding capabilities. [ABSTRACT FROM AUTHOR]- Published
- 2017
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43. Optional use of CAM photosynthesis in two C4 species, Portulaca cyclophylla and Portulaca digyna.
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Holtum, Joseph A.M., Hancock, Lillian P., Edwards, Erika J., and Winter, Klaus
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- *
CRASSULACEAN acid metabolism , *CARBON 4 photosynthesis , *PORTULACA , *GAS exchange in plants , *ACIDIFICATION & the environment - Abstract
Low levels of crassulacean acid metabolism (CAM) are demonstrated in two species with C 4 photosynthesis, Portulaca cyclophylla and P. digyna. The expression of CAM in P. cyclophylla and P. digyna is facultative, i.e. optional. Well-watered plants did not accumulate acid at night and exhibited gas-exchange patterns consistent with C 4 photosynthesis. CAM-type nocturnal acidification was reversible in that it was induced following drought and lost when droughted plants were rewatered. In P. cyclophylla , droughting was accompanied by a small but discernible net uptake of CO 2 during the dark, whereas in P. digyna , net CO 2 exchange at night approached the CO 2 compensation point but did not transition beyond it. This report brings the number of known C 4 species with a capacity for expressing CAM to six. All are species of Portulaca . The observation of CAM in P. cyclophylla and P. digyna is the first for species in the opposite-leaved (OL) Portulacelloid-anatomy lineage of Portulaca and for the Australian clade therein. The other four species are within the alternate-leaved (AL) lineage, in the Atriploid-anatomy Oleracea and the Pilosoid-anatomy Pilosa clades. Studies of the evolutionary origins of C 4 and CAM in Portulaca will benefit from a more wide-range survey of CAM across its species, particularly in the C 3 -C 4 intermediate-containing Cryptopetala clade. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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44. The combination of gas-phase fluorophore technology and automation to enable high-throughput analysis of plant respiration.
- Author
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Scafaro, Andrew P., Negrini, A. Clarissa A., O'Leary, Brendan, Ahmad Rashid, F. Azzahra, Hayes, Lucy, Yuzhen Fan, You Zhang, Chochois, Vincent, Badger, Murray R., Millar, A. Harvey, and Atkin, Owen K.
- Subjects
- *
MITOCHONDRIA , *AGRONOMY , *FLUOROPHORES , *PLANT cells & tissues ,WHEAT genetics - Abstract
Background: Mitochondrial respiration in the dark (Rdark) is a critical plant physiological process, and hence a reliable, efficient and high-throughput method of measuring variation in rates of Rdark is essential for agronomic and ecological studies. However, currently methods used to measure Rdark in plant tissues are typically low throughput. We assessed a high-throughput automated fluorophore system of detecting multiple O2 consumption rates. The fluorophore technique was compared with O2-electrodes, infrared gas analysers (IRGA), and membrane inlet mass spectrometry, to determine accuracy and speed of detecting respiratory fluxes. Results: The high-throughput fluorophore system provided stable measurements of Rdark in detached leaf and root tissues over many hours. High-throughput potential was evident in that the fluorophore system was 10 to 26-fold faster per sample measurement than other conventional methods. The versatility of the technique was evident in its enabling: (1) rapid screening of Rdark in 138 genotypes of wheat; and, (2) quantification of rarely-assessed whole-plant Rdark through dissection and simultaneous measurements of above- and below-ground organs. Discussion: Variation in absolute Rdark was observed between techniques, likely due to variation in sample conditions (i.e. liquid vs. gas-phase, open vs. closed systems), indicating that comparisons between studies using different measuring apparatus may not be feasible. However, the high-throughput protocol we present provided similar values of Rdark to the most commonly used IRGA instrument currently employed by plant scientists. Together with the greater than tenfold increase in sample processing speed, we conclude that the high-throughput protocol enables reliable, stable and reproducible measurements of Rdark on multiple samples simultaneously, irrespective of plant or tissue type. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
45. Carbonic anhydrase in elasmobranchs and current climate change scenario implications.
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Giareta, Eloísa Pinheiro, Hauser-Davis, Rachel Ann, Abilhoa, Vinícius, and Wosnick, Natascha
- Subjects
- *
CARBONIC anhydrase , *LITERATURE reviews , *CHONDRICHTHYES , *COMPARATIVE method , *OSMOREGULATION , *SHARKS , *CLIMATE change - Abstract
The enzyme carbonic anhydrase (CA) has well-known functions in acid-base balance, respiratory gas exchange, and osmoregulation in teleost fishes. However, studies concerning the role of CA in elasmobranchs are still scarce. Therefore, the aim of this study is to present the current status of CA studies in sharks and rays, as well as to identify gaps and emerging needs, in order to guide future studies. This review is organized according to the main roles of CA, with further considerations on climate change and CA effects indicated as paramount, as strategies in the face of climate change can be crucial for species response. The literature review revealed a reduction in publications on CA over the years. In addition, a historical research differentiation is noted, where the first assessments on the subject addressed investigations on basic CA functions, while the most recent studies present a comparative approach among species as well as interdisciplinary discussions, such as ecology and phylogeny. Considering that several elasmobranchs are threatened, future studies should prioritize non-lethal methodologies, in addition to expanding studies to climate change effects on CA. [Display omitted] • Elasmobranch carbonic anhydrase studies have declined over the decades. • Osmoregulation is the most studied role involving Carbonic Anhydrase. • Most elasmobranchs did have not yet been assessed regarding carbonic anhydrase. • Environmental alterations, such as climate change and pollution affect this enzyme. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
46. Artificial lungs--Where are we going with the lung replacement therapy?
- Subjects
GOAT FETUSES ,PUMP-LUNG ,LIFE-SUPPORT ,FIBER BUNDLE ,IN-VITRO ,extracorporeal membrane oxygenation ,extracorporeal life support ,BRIDGE ,SINGLE-CENTER EXPERIENCE ,EXTRACORPOREAL MEMBRANE-OXYGENATION ,end‐ ,CO2 REMOVAL ,stage lung disease ,lung transplantation ,wearable portable lung ,artificial lung ,biofabricated lung ,GAS-EXCHANGE - Abstract
Lung transplantation may be a final destination therapy in lung failure, but limited donor organ availability creates a need for alternative management, including artificial lung technology. This invited review discusses ongoing developments and future research pathways for respiratory assist devices and tissue engineering to treat advanced and refractory lung disease. An overview is also given on the aftermath of the coronavirus disease 2019 pandemic and lessons learned as the world comes out of this situation. The first order of business in the future of lung support is solving the problems with existing mechanical devices. Interestingly, challenges identified during the early days of development persist today. These challenges include device-related infection, bleeding, thrombosis, cost, and patient quality of life. The main approaches of the future directions are to repair, restore, replace, or regenerate the lungs. Engineering improvements to hollow fiber membrane gas exchangers are enabling longer term wearable systems and can be used to bridge lung failure patients to transplantation. Progress in the development of microchannel-based devices has provided the concept of biomimetic devices that may even enable intracorporeal implantation. Tissue engineering and cell-based technologies have provided the concept of bioartificial lungs with properties similar to the native organ. Recent progress in artificial lung technologies includes continued advances in both engineering and biology. The final goal is to achieve a truly implantable and durable artificial lung that is applicable to destination therapy.
- Published
- 2020
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47. Carbon dioxide and methane fluxes from different surface types in a created urban wetland
- Author
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X. Li, O. Wahlroos, S. Haapanala, J. Pumpanen, H. Vasander, A. Ojala, T. Vesala, I. Mammarella, Micrometeorology and biogeochemical cycles, INAR Physics, Institute for Atmospheric and Earth System Research (INAR), Department of Forest Sciences, Harri Vasander / Principal Investigator, Forest Ecology and Management, Ecosystems and Environment Research Programme, Helsinki Institute of Sustainability Science (HELSUS), Viikki Plant Science Centre (ViPS), Anne Ojala / Principal Investigator, and Ecosystem processes (INAR Forest Sciences)
- Subjects
1171 Geosciences ,0106 biological sciences ,010504 meteorology & atmospheric sciences ,Stormwater ,Eddy covariance ,lcsh:Life ,Growing season ,CONSTRUCTED WETLANDS ,UNCERTAINTY ,Wetland ,OXIDATION ,Atmospheric sciences ,01 natural sciences ,lcsh:QH540-549.5 ,ECOSYSTEMS ,STORMWATER MANAGEMENT ,Ecosystem ,1172 Environmental sciences ,Ecology, Evolution, Behavior and Systematics ,RESTORATION ,0105 earth and related environmental sciences ,Earth-Surface Processes ,geography ,geography.geographical_feature_category ,EDDY COVARIANCE TECHNIQUE ,010604 marine biology & hydrobiology ,lcsh:QE1-996.5 ,Vegetation ,15. Life on land ,Radiative forcing ,LAKE ,Subarctic climate ,6. Clean water ,lcsh:Geology ,lcsh:QH501-531 ,13. Climate action ,Environmental science ,lcsh:Ecology ,EMISSION ,GAS-EXCHANGE - Abstract
Many wetlands have been drained due to urbanization, agriculture, forestry or other purposes, which has resulted in a loss of their ecosystem services. To protect receiving waters and to achieve services such as flood control and storm water quality mitigation, new wetlands are created in urbanized areas. However, our knowledge of greenhouse gas exchange in newly created wetlands in urban areas is currently limited. In this paper we present measurements carried out at a created urban wetland in Southern Finland in the boreal climate. We conducted measurements of ecosystem CO2 flux and CH4 flux (FCH4) at the created storm water wetland Gateway in Nummela, Vihti, Southern Finland, using the eddy covariance (EC) technique. The measurements were commenced the fourth year after construction and lasted for 1 full year and two subsequent growing seasons. Besides ecosystem-scale fluxes measured by the EC tower, the diffusive CO2 and CH4 fluxes from the open-water areas (FwCO2 and FwCH4, respectively) were modelled based on measurements of CO2 and CH4 concentration in the water. Fluxes from the vegetated areas were estimated by applying a simple mixing model using the above-mentioned fluxes and the footprint-weighted fractional area. The half-hourly footprint-weighted contribution of diffusive fluxes from open water ranged from 0 % to 25.5 % in 2013. The annual net ecosystem exchange (NEE) of the studied wetland was 8.0 g C-CO2 m−2 yr−1, with the 95 % confidence interval between −18.9 and 34.9 g C-CO2 m−2 yr−1, and FCH4 was 3.9 g C-CH4 m−2 yr−1, with the 95 % confidence interval between 3.75 and 4.07 g C-CH4 m−2 yr−1. The ecosystem sequestered CO2 during summer months (June–August), while the rest of the year it was a CO2 source. CH4 displayed strong seasonal dynamics, higher in summer and lower in winter, with a sporadic emission episode in the end of May 2013. Both CH4 and CO2 fluxes, especially those obtained from vegetated areas, exhibited strong diurnal cycles during summer with synchronized peaks around noon. The annual FwCO2 was 297.5 g C-CO2 m−2 yr−1 and FwCH4 was 1.73 g C-CH4 m−2 yr−1. The peak diffusive CH4 flux was 137.6 nmol C-CH4 m−2 s−1, which was synchronized with the FCH4. Overall, during the monitored time period, the established storm water wetland had a climate-warming effect with 0.263 kg CO2-eq m−2 yr−1 of which 89 % was contributed by CH4. The radiative forcing of the open-water areas exceeded that of the vegetation areas (1.194 and 0.111 kg CO2-eq m−2 yr−1, respectively), which implies that, when considering solely the climate impact of a created wetland over a 100-year horizon, it would be more beneficial to design and establish wetlands with large patches of emergent vegetation and to limit the areas of open water to the minimum necessitated by other desired ecosystem services.
- Published
- 2020
48. Extending the range of applicability of the semi‐empirical ecosystem flux model PRELES for varying forest types and climate
- Author
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Annikki Mäkelä, Tuomo Kalliokoski, Mikko Peltoniemi, Xianglin Tian, Francesco Minunno, Tianjian Cao, Department of Forest Sciences, Ecosystem processes (INAR Forest Sciences), Institute for Atmospheric and Earth System Research (INAR), INAR Physics, Forest Ecology and Management, Department of Physics, and Forest Modelling Group
- Subjects
0106 biological sciences ,010504 meteorology & atmospheric sciences ,evapotranspiration ,Extrapolation ,Eddy covariance ,Forests ,Atmospheric sciences ,010603 evolutionary biology ,01 natural sciences ,Soil ,light-use efficiency ,Evapotranspiration ,NET PRIMARY PRODUCTION ,geographical variations ,Environmental Chemistry ,plant functional type ,Uncertainty quantification ,Ecosystem ,1172 Environmental sciences ,BOREAL-FOREST ,0105 earth and related environmental sciences ,General Environmental Science ,OF-THE-ART ,4112 Forestry ,Global and Planetary Change ,Climate pattern ,Ecology ,RADIATION-USE EFFICIENCY ,multisite calibration ,Water ,inverse modelling ,Primary production ,Bayes Theorem ,GROSS PRIMARY PRODUCTION ,Vegetation ,15. Life on land ,Plant functional type ,CARBON BALANCE MODEL ,BAYESIAN CALIBRATION ,13. Climate action ,1181 Ecology, evolutionary biology ,Environmental science ,LIGHT USE EFFICIENCY ,GAS-EXCHANGE ,PRIMARY PRODUCTIVITY - Abstract
Applications of ecosystem flux models on large geographical scales are often limited by model complexity and data availability. Here we calibrated and evaluated a semi-empirical ecosystem flux model, PREdict Light-use efficiency, Evapotranspiration and Soil water (PRELES), for various forest types and climate conditions, based on eddy covariance data from 55 sites. A Bayesian approach was adopted for model calibration and uncertainty quantification. We applied the site-specific calibrations and multisite calibrations to nine plant functional types (PFTs) to obtain the site-specific and PFT-specific parameter vectors for PRELES. A systematically designed cross-validation was implemented to evaluate calibration strategies and the risks in extrapolation. The combination of plant physiological traits and climate patterns generated significant variation in vegetation responses and model parameters across but not within PFTs, implying that applying the model without PFT-specific parameters is risky. But within PFT, the multisite calibrations performed as accurately as the site-specific calibrations in predicting gross primary production (GPP) and evapotranspiration (ET). Moreover, the variations among sites within one PFT could be effectively simulated by simply adjusting the parameter of potential light-use efficiency (LUE), implying significant convergence of simulated vegetation processes within PFT. The hierarchical modelling of PRELES provides a compromise between satellite-driven LUE and physiologically oriented approaches for extrapolating the geographical variation of ecosystem productivity. Although measurement errors of eddy covariance and remotely sensed data propagated a substantial proportion of uncertainty or potential biases, the results illustrated that PRELES could reliably capture daily variations of GPP and ET for contrasting forest types on large geographical scales if PFT-specific parameterizations were applied.
- Published
- 2020
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49. Effect of the 'Recruitment' Maneuver on Respiratory Mechanics in Laparoscopic Sleeve Gastrectomy Surgery
- Author
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Panaccione, Remo, Colombel, Jean-Frederic, Travis, Simon P. L., Bossuyt, Peter, Baert, Filip, Vanasek, Tomas, Novacek, Gottfried, Lee, Wan-Ju, D'Haens, Geert R., Danalioglu, Ahmet, Armuzzi, Alessandro, Reinisch, Walter, Johnson, Scott, Buessing, Marric, Neimark, Ezequiel, Petersson, Joel, SÜMER, İSMAİL, Sumer, Ismail, Topuz, Ufuk, Alver, Selcuk, Umutoglu, Tarik, Bakan, Mefkur, Zengin, Seniyye Ulgen, Coskun, Halil, Salihoglu, Ziya, İÜC, Cerrahpaşa Tıp Fakültesi, Cerrahi Tıp Bilimleri Bölümü, and COŞKUN, Halil
- Subjects
Insufflation ,medicine.medical_specialty ,MORBIDLY OBESE-PATIENTS ,END-EXPIRATORY PRESSURE ,Endocrinology, Diabetes and Metabolism ,medicine.medical_treatment ,BLOOD-GASES ,Original Contributions ,030209 endocrinology & metabolism ,Atelectasis ,Respiratory physiology ,03 medical and health sciences ,GENERAL-ANESTHESIA ,0302 clinical medicine ,Pneumoperitoneum ,Gastrectomy ,ABDOMINAL-SURGERY ,medicine ,Humans ,INTRAOPERATIVE VENTILATORY STRATEGIES ,PNEUMOPERITONEUM ,PEEP ,Mechanical ventilation ,Nutrition and Dietetics ,SÜMER İ., Topuz U., Alver S., Umutoglu T., Bakan M., ZENGİN S. Ü. , COŞKUN H., SALİHOĞLU Z., -Effect of the -Recruitment- Maneuver on Respiratory Mechanics in Laparoscopic Sleeve Gastrectomy Surgery-, OBESITY SURGERY, 2020 ,business.industry ,PULMONARY ATELECTASIS ,medicine.disease ,Respiration, Artificial ,Surgery ,Obesity, Morbid ,Compliance (physiology) ,Laparoscopic sleeve gastrectomy ,Recruitment maneuver ,ARTERIAL OXYGENATION ,Respiratory Mechanics ,Arterial blood ,030211 gastroenterology & hepatology ,Laparoscopy ,Airway ,business ,GAS-EXCHANGE - Abstract
SALIHOGLU, ZIYA/0000-0002-6905-2664 WOS:000521719800002 PubMed ID: 32207048 Purpose LSG surgery is used for surgical treatment of morbid obesity. Obesity, anesthesia, and pneumoperitoneum cause reduced pulmoner functions and a tendency for atelectasis. The alveolar "recruitment" maneuver (RM) keeps airway pressure high, opening alveoli, and increasing arterial oxygenation. The aim of our study is to research the effect on respiratory mechanics and arterial blood gases of performing the RM in LSG surgery. Materials and Methods Sixty patients undergoing LSG surgery were divided into two groups (n = 30) Patients in group R had the RM performed 5 min after desufflation with 100% oxygen, 40 cmH(2)O pressure for 40 s. Group C had standard mechanical ventilation. Assessments of respiratory mechanics and arterial blood gases were made in the 10th min after induction (T1), 10th min after insufflation (T2), 5th min after desufflation (T3), and 15th min after desufflation (T4). Arterial blood gases were assessed in the 30th min (T5) in the postoperative recovery unit. Results In group R, values at T5, PaO2 were significantly high, while PaCO2 were significantly low compared with group C. Compliance in both groups reduced with pneumoperitoneum. At T4, the compliance in the recruitment group was higher. In both groups, there was an increase in PIP with pneumoperitoneum and after desufflation this was identified to reduce to levels before pneumoperitoneum. Conclusion Adding the RM to PEEP administration for morbidly obese patients undergoing LSG surgery is considered to be effective in improving respiratory mechanics and arterial blood gas values and can be used safely.
- Published
- 2020
50. Longer epidermal cells underlie a quantitative source of variation in wheat flag leaf size
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Camila M. Zanella, Marilena Rotondo, Charlie McCormick‐Barnes, Greg Mellers, Beatrice Corsi, Simon Berry, Giulia Ciccone, Rob Day, Michele Faralli, Alexander Galle, Keith A. Gardner, John Jacobs, Eric S. Ober, Ana Sánchez del Rio, Jeroen Van Rie, Tracy Lawson, and James Cockram
- Subjects
Science & Technology ,ELONGATION ,Physiology ,FIELD-GROWN WHEAT ,PHOTOSYNTHESIS ,Plant Sciences ,flag leaf morphology ,haplotype analysis ,maximum stomatal conductance (Gsmax) ,multifounder advanced generation intercross population ,quantitative trait variation ,wheat (Triticum aestivum L.) ,BREAD WHEAT ,Plant Science ,AUXIN ,ANGLE ,maximum stomatal conductance (G(smax)) ,YIELD ,RICE ,Life Sciences & Biomedicine ,GAS-EXCHANGE ,ENCODE - Abstract
The wheat flag leaf is the main contributor of photosynthetic assimilates to developing grains. Understanding how canopy architecture strategies affect source strength and yield will aid improved crop design. We used an eight-founder population to investigate the genetic architecture of flag leaf area, length, width and angle in European wheat. For the strongest genetic locus identified, we subsequently created a near-isogenic line (NIL) pair for more detailed investigation across seven test environments. Genetic control of traits investigated was highly polygenic, with colocalisation of replicated quantitative trait loci (QTL) for one or more traits identifying 24 loci. For QTL QFll.niab-5A.1 (FLL5A), development of a NIL pair found the FLL5A+ allele commonly conferred a c. 7% increase in flag and second leaf length and a more erect leaf angle, resulting in higher flag and/or second leaf area. Increased FLL5A-mediated flag leaf length was associated with: (1) longer pavement cells and (2) larger stomata at lower density, with a trend for decreased maximum stomatal conductance (Gsmax ) per unit leaf area. For FLL5A, cell size rather than number predominantly determined leaf length. The observed trade-offs between leaf size and stomatal morphology highlight the need for future studies to consider these traits at the whole-leaf level. ispartof: NEW PHYTOLOGIST vol:237 issue:5 pages:1558-1573 ispartof: location:England status: published
- Published
- 2022
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