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Several imaging techniques are used in biological and biomedical studies. Micro-computed tomography (micro-CT) is a non-destructive imaging technique that allows the rapid digitisation of internal and external structures of a sample in three dimensions and with great resolution. In this review, the strengths and weaknesses of some common imaging techniques applied in biological and biomedical fields, such as optical microscopy, confocal laser scanning microscopy, and scanning electron microscopy, are presented and compared with the micro-CT technique through five use cases. Finally, the ability of micro-CT to create non-destructively 3D anatomical and morphological data in sub-micron resolution and the necessity to develop complementary methods with other imaging techniques, in order to overcome limitations caused by each technique, is emphasised.

Subtidal hard bottoms are of particular scientific and economic value as they are highly productive systems. They are less well studied compared with soft bottoms, as they often require manual sample collection via scuba diving. Although a multitude of sampling devices is available for soft bottoms, only a few are suitable for hard substrates, and their performance is largely unstudied. In the present study, three hard bottom sampling methods were compared, regarding their sampling efficiency and the damage they may cause to macrobenthic and meiobenthic organisms. Two of the sampling methods examined are typically employed for the study of hard bottom substrates (manual collection, airlift device), while the third involves a newly constructed sampler (MANOSS – Manual Operated Suction Sampler). All three sampling methods were tested at 12 m depth on a hard bottom substrate with algal coverage dominated by Cystoseira spp. No overall significant differences were observed between the sampling efficiency and the damage caused by the three sampling methods regarding the macrofaunal assemblages, with the exception of the MANOSS method which collected more species than the manual method. In addition, significant differences were observed in the collecting performance for the meiobenthic assemblages, presenting significantly higher densities of meiofauna sampled by the MANOSS compared with the manual collection method, while the airlift device presented an intermediate efficiency. However, taking into account other factors such as cost, ease of use and the scope of each study, none of the methods clearly outperforms the others.

Objectives Adverse neurologic outcome can be a debilitating complication after cardiac surgery. The aim of this study was to investigate the potential neuroprotective action of erythromycin, a well known antibiotic agent, regarding postoperative cognitive decline in patients undergoing cardiac surgery. Methods Forty patients scheduled for elective coronary artery bypass grafting surgery were prospectively randomly assigned in 2 groups: the erythromycin group (n = 19) who received erythromycin at a dose of 25 mg/kg before and after surgery and the control group (n = 21) who did not receive it. All patients were monitored with near-infrared spectroscopy during the operation. Interleukin (IL) 1 and IL-6 as inflammatory markers and tau protein as a marker of brain injury were measured before and after surgery. Neurocognitive assessment was performed before surgery, on the day of discharge, and at 3 months postoperatively. Results Both groups were comparable in terms of demographic and clinical data. Patients who took erythromycin presented with significantly better cognitive performance before discharge and 3 months after surgery. No significant differences between the 2 groups referring to IL-1 and IL-6 values were detected. Tau serum values were lower in the erythromycin group after surgery. Conclusions Erythromycin administration attenuates cerebral damage and postoperative cognitive decline after coronary artery bypass grafting surgery. Trial registration The study was retrospectively registered at ClinicalTrials.gov (NCT01274754). Study start day: November 2008.

Examination of polychaete specimens from Haifa Bay (Israel, eastern Mediterranean Sea) revealed several individuals exhibiting morphological characteristics similar to Sphaerosyllis hystrix Claparède, 1863. A detailed morphometrical analysis of the Israeli specimens in comparison to specimens of Sphaerosyllis hystrix and Sphaerosyllis boeroi Musco, Çinar and Giangrande, 2005 supported the description of the former as a new species, Sphaerosyllis levantina sp. n. Individuals of Sphaerosyllis hystrix formed a very heterogeneous group with strong character variations in the analysis and the presumed cosmopolitan distribution of the species is discussed based on literature records.

This paper discusses the design and implementation of a citizen science pilot project, COMBER (Citizens’ Network for the Observation of Marine BiodivERsity, http://www.comber.hcmr.gr), which has been initiated under the ViBRANT EU e-infrastructure. It is designed and implemented for divers and snorkelers who are interested in participating in marine biodiversity citizen science projects. It shows the necessity of engaging the broader community in the marine biodiversity monitoring and research projects, networks and initiatives. It analyses the stakeholders, the industry and the relevant markets involved in diving activities and their potential to sustain these activities. The principles, including data policy and rewards for the participating divers through their own data, upon which this project is based are thoroughly discussed. The results of the users analysis and lessons learned so far are presented. Future plans include promotion, links with citizen science web developments, data publishing tools, and development of new scientific hypotheses to be tested by the data collected so far.

This paper considers the hypothesis that changes in community structure through the control of the larvae maintenance and of the biological traits of the species mostly contribute to the spatio-temporal community pattern. This is supported by the results of the study, the changes to the macrobenthic community pattern deriving from two sampling periods in Gialova lagoon (SW Greece), carried out on a seasonal basis for two yearly periods: 1994–95 and 1998–99. Cognetti’s hypothesis that populations of the tolerant species occupying coastal marine habitats may belong to different species is another alternative hypothesis still to be tested. The importance of alternative management plans aiming at the amelioration of the hydrodynamic conditions of the lagoons and supported by continuous scientific monitoring is highlighted. Two canals bringing fresh water were opened at the beginning of the second sampling period, an intervention among others, suggested by the management plan proposed after the end of the first sampling period. The results show considerable variations in the values of the key environmental variables, for instance long periods with negative Redox potential values, decreased salinity and increased concentrations of the particulate organic matter and of the nutrients. The variables were correlated with the spatio-temporal community pattern, characterized during the second sampling period by: (i) greater dissimilarities among stations/seasons; (ii) disruption of the periodic trend observed on the seasonal scale; (iii) larger relative dissimilarities among the patterns stemming from the macrobenthos and the most abundant groups (polychaetes, molluscs, crustaceans); (iv) significant decrease in abundance or even the disappearance of several marine origin species, along with increased abundance in a few brackish-water species. All of the above changes in the community pattern are considered as early warning signals leading towards degradation, which has not yet been registered in the phylogenetic/taxonomic structure of the macrobenthic community.

It is accepted that observed patterns in community structure change as analyses are carried out at higher taxonomic levels. Univariate analyses which incorporate higher taxonomic structure within assemblages have been shown to be informative. In this paper we suggest ways in which changes in multivariate relationships at higher taxonomic levels and associated with higher taxonomic/phylogenetic structure of the community may be incorporated into multivariate analyses, an aspect never occurred before in this type of analysis. Four approaches, namely: biodiversity MDS (bdMDS), number of taxa MDS (ntMDS), delta MDS (δMDS) and lambda MDS (λMDS), are proposed, and applied to theoretical data as well as to data collected from the literature on the Mediterranean lagoonal environment. Results show that these approaches have the capacity to distinguish severely impacted lagoons from naturally disturbed ones, although in practice the simplest method (ntMDS) was the most successful. Analyses based on the most abundant groups (polychaetes, molluscs, crustaceans) did not always match analyses based on the entire macrofauna, mirroring the performance of taxonomic distinctness indices in the Mediterranean lagoons. The important characteristics of the approaches introduced, as well as potential criticisms are provided. Application of these techniques on smaller scales and to other habitats, is suggested prior to their wider use in the region.

The loss of species is known to have negative impacts on the integrity of ecosystems, but the details of this relationship are still far from being fully understood. This study investigates how the distribution patterns of polychaete species and their associated biological trait patterns in six Mediterranean coastal lagoons change under computationally simulated scenarios of random species loss. Species were progressively removed from the full polychaete assemblage and the similarity between the full assemblage and the reduced matrices of both species and trait patterns was calculated. The results indicate the magnitude of changes that might follow species loss in the real world, and allow consideration of the resistance of the system's functional capacity to loss of species, expressed through the species' biological traits as an approximation to functioning. Comparisons were made between the changes in the distribution of species and of traits, as well as between the six different lagoons. While the change of species and trait patterns was strongly correlated within most lagoons, different lagoons showed distinctly different patterns. In disturbed lagoons, the dominance of one or few species was the major driver for the observed patterns and the loss of these species caused extreme changes. Less disturbed lagoons were less susceptible to extreme changes and had a greater resistance towards species loss. Species richness appears to be less important for the ability of the lagoons to buffer changes, instead the initial composition of the assemblage and the identity of the lost species determine the response of the system and our ability to predict changes of the assemblage's functional potential.

An attempt is made to compare the results of different rapid biodiversity assessment techniques at the pan-Mediterranean, sectorial and local levels. A uniform multivariate pattern exists at the pan-Mediterranean and national (sectorial) levels: lagoons can be different when they host only a few species, but as species numbers increase, lagoons become homogenous in composition. Multivariate techniques cannot distinguish anthropogenically-impacted lagoons from those, which are naturally disturbed. In the pan-Mediterranean context it is the higher taxonomic levels, but in the national and local context it is the most abundant macrobenthic groups (polychaetes, molluscs and crustaceans) and meiobenthos which provide patterns closest to that derived from the species level. Taxonomic distinctness indices applied to polychaete and mollusc inventories provide meaningful results at most levels and scales of observation. These indices seem to be robust enough to discriminate anthropogenically impacted from naturally disturbed lagoons.

The study of ecosystem functioning – the role which organisms play in an ecosystem – is becoming increasingly important in marine ecological research. The functional structure of a community can be represented by a set of functional traits assigned to behavioural, reproductive and morphological characteristics. The collection of these traits from the literature is however a laborious and time-consuming process, and gaps of knowledge and restricted availability of literature are a common problem. Trait data are not yet readily being shared by research communities, and even if they are, a lack of trait data repositories and standards for data formats leads to the publication of trait information in forms which cannot be processed by computers. This paper describes Polytraits (http://polytraits.lifewatchgreece.eu), a database on biological traits of marine polychaetes (bristle worms, Polychaeta: Annelida). At present, the database contains almost 20,000 records on morphological, behavioural and reproductive characteristics of more than 1,000 marine polychaete species, all referenced by literature sources. All data can be freely accessed through the project website in different ways and formats, both human-readable and machine-readable, and have been submitted to the Encyclopedia of Life for archival and integration with trait information from other sources.

D'Amato G, Chatzigeorgiou G, Corsico R, Gioulekas D, Jager L, Jager S, Kontou-Fili K, Kouridakis S, Liccardi G, Meriggi A, Palma-Carlos A, Palma-Carlos ML, Pagan Aleman A, Parmiani S, Puccinelli R Russo M, Spieksma FThM, Torricelli R, Wuthrich B. Evaluation of the prevalence of skin prick test positivity to Alternaria and Cladosporium in patients with suspected respiratory allergy. A European multicenter study promoted by the Subcommittee on Aerobiology and Environmental Aspects of Inhalant Allergens of the European Academy of Allergology and Clinical Immunology. This trial was undertaken to study, in several geographically spread European countries, the prevalence of skin prick test (SPT) positivity to Alternaria (A) and Cladosporium (C) in subjects with nasal and/or bronchial symptoms of suspected allergic cause. Each patient completed an anamnestic questionnaire and underwent SPT with a panel of common inhalant allergens and also A and C supplied by three different laboratories, to allow for manufacturer bias. Specific scrum IgE determination was carried out only in subjects with SPT positivity to A and/or C with an immunoassay system. In nine European allergology centers, a total of 877 subjects was enrolled in the trial; 83 of them showed SPT positivity to A and/or C; only nine patients showed monosensitization to A, and none to C The highest percentage of positive subjects was found in Spain (20%); the lowest in Portugal (3%). In the other seven centers, the variation was 7–10%. The age range of mold-positive subjects was 5–60 years. Rhinitis was by far the most common symptom, whether associated or not with asthma and/or conjunctivitis.

10 páginas, 5 figuras, 2 tablas., The global NaGISA (Natural Geography in Shore Areas) initiative focusing on long-term monitoring of coastal biodiversity has recently been expanded to the Mediterranean. On the basis of datasets from four Mediterranean hard substrate sites and by using themost abundant polychaete family (Syllidae), two questions are addressed in this study: (a) Is the biodiversity sampled in the two NaGISA sites, based on the family Syllidae, representative of the regional one of the Mediterranean Sea? (b) Are local syllid taxo-communities assembled at random from the regional species pool? Randomisation tests determining to what extent local species lists and their phylogenetic relationships are assembled at random from a regional one showed that at small observational scales (e.g. replicate units, depths) the phylogenetic diversity is assembled at random from the one known to exist locally. It is assumed, therefore, that local processes here have a stronger influence on community assembly than historical- evolutionary processes. The latter is in accordance with previous results derived from using polychaetes to test the same hypotheses at a pan-European level. Local syllid biodiversity in the western Mediterranean is a randomsubset of theMediterranean one,whereas that of the NaGISA sites in the eastern Mediterranean is only under certain conditions. Therefore, the currently observed biodiversity of the Mediterranean sites can be considered as representative of that of the entire regional sea only under certain assumptions, as far as the syllid taxo-communities are concerned, demonstrating the potential of the taxon as a surrogate of the polychaete biodiversity.

We collected the daily pollen samples during a 3-year period (Febr '87–Dec '89), using a Burkard volumetric trap, located on a high level area in the center of the city.Parietaria officinalis pollen was not differentiated under microscope from the other Urticaceae but through phenological criteria. The patients included in the detection of the sensitivity toP. officinalis pollen came from the Out-patient Clinic of Bronchial Asthma of the General Hospital «G. Papanikolaou». They had a seasonal pollinosis and they were submitted to Pricktest using a battery of 22 groups and aP. officinalis pollen extract. The Urticaceae pollen appears first in the atmosphere of Thessaloniki in the end of March, shows a peak in the beginning of May and continues to be present till the end of August. We detectedP. officinalis pollen sensitivity combined with other allergens in 24.1% of the patients and in 1.4% a monosensitivity toP. officinalis.

The observations of airborne pollen ofOlea europea and the incidence of clinical manifestations in patients allergic to this pollen type have not been registered so far in the city of Thessaloniki.