71 results on '"GeurtsvanKessel C"'
Search Results
2. One-year data on immunogenicity and breakthrough infections in patients with solid tumors vaccinated against COVID-19 during systemic cancer treatment
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van der Veldt, A A M, Oosting, S F, Fehrmann, R S N, GeurtsvanKessel, C H, van Binnendijk, R S, Dingemans, A-M C, Smit, E F, Hiltermann, T J N, Hartog, G den, Jalving, M, Westphal, T T, Bhattacharya, A, de Wilt, F, Ernst, S M, Boerma, A, van Zijl, L, Rimmelzwaan, G F, Kvistborg, P, van Els, C A C M, Rots, N Y, van Baarle, D, Haanen, J B A G, de Vries, E G E, Guided Treatment in Optimal Selected Cancer Patients (GUTS), Damage and Repair in Cancer Development and Cancer Treatment (DARE), Translational Immunology Groningen (TRIGR), Targeted Gynaecologic Oncology (TARGON), Medical Oncology, Radiology & Nuclear Medicine, Virology, and Pulmonary Medicine
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Cancer Research ,Oncology ,SDG 3 - Good Health and Well-being - Published
- 2023
3. Outpatient convalescent plasma therapy for high-risk patients with early COVID-19. A randomized placebo-controlled trial
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Gharbharan, A., Jordans, C., Zwaginga, L., Papageorgiou, G., Geloven, N. van, Wijngaarden, P. van, Hollander, J. den, Karim, F., Leeuwen-Segarceanu, E. van, Soetekouw, R., Lammers, J., Postma, D., Kampschreur, L., Groeneveld, G., Swaneveld, F., Schoot, C.E. van der, Gotz, H., Haagmans, B., Koopmans, M., Bogers, S., Geurtsvankessel, C., Zwaginga, J.J., Rokx, C., Rijnders, B., CoV-Early study grp, Clinical Haematology, Internal Medicine, Medical Microbiology & Infectious Diseases, Epidemiology, Public Health, and Virology
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Microbiology (medical) ,Infectious Diseases ,Convalescent plasma ,SDG 3 - Good Health and Well-being ,Outpatients ,COVID-19 ,General Medicine ,Therapy ,Antibodies - Abstract
Objectives: The potential benefit of convalescent plasma (CP) therapy for coronavirus disease 2019 (COVID-19) is highest when administered early after symptom onset. Our objective was to determine the effectiveness of CP therapy in improving the disease course of COVID-19 among high-risk outpatients. Methods: A multicentre, double-blind randomized trial was conducted comparing 300 mL of CP with non-CP. Patients were >= 50 years, were symptomatic for 50 years was 80%. Patients had a median age of 60 years, symptoms for 5 days, and 207 of 416 patients received CP therapy. During the 28 day follow-up, 28 patients were hospitalized and two died. The OR for an improved disease severity score with CP was 0.86 (95% credible interval, 0.59-1.22). The OR was 0.58 (95% CI, 0.33-1.02) for patients with
- Published
- 2022
4. Detection of SARS-CoV-2 in Air and on Surfaces in Rooms of Infected Nursing Home Residents
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Linde, K. J., Wouters, I. M., Kluytmans, J. A. J. W., Kluytmans-van den Bergh, M. F. Q., Pas, S. D., GeurtsvanKessel, C. H., Koopmans, M. P. G., Meier, M., Meijer, P., Raben, C. R., Spithoven, J., Tersteeg-Zijderveld, M. H. G., Heederik, D. J. J., Dohmen, W., Linde, K. J., Wouters, I. M., Kluytmans, J. A. J. W., Kluytmans-van den Bergh, M. F. Q., Pas, S. D., GeurtsvanKessel, C. H., Koopmans, M. P. G., Meier, M., Meijer, P., Raben, C. R., Spithoven, J., Tersteeg-Zijderveld, M. H. G., Heederik, D. J. J., and Dohmen, W.
- Abstract
There is an ongoing debate on airborne transmission of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) as a risk factor for infection. In this study, the level of SARS-CoV-2 in air and on surfaces of SARS-CoV-2 infected nursing home residents was assessed to gain insight in potential transmission routes. During outbreaks, air samples were collected using three different active and one passive air sampling technique in rooms of infected patients. Oropharyngeal swabs (OPS) of the residents and dry surface swabs were collected. Additionally, longitudinal passive air samples were collected during a period of 4 months in common areas of the wards. Presence of SARS-CoV-2 RNA was determined using RT-qPCR, targeting the RdRp- and E-genes. OPS, samples of two active air samplers and surface swabs with Ct-value 4 mu m 60% (6/10); 1-4 mu m 50% (5/10)
- Published
- 2022
5. Immunogenicity 5-months after homologous or heterologous booster vaccination in Health Care Workers primed with Ad26.COV2.S
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Sablerolles, R., Rietdijk, W., Goorhuis, A., Postma, D., Visser, L., Koopmans, M., Dalm, V, Kootstra, N., Huckriede, A., Lafeber, M., van Baarle, D., GeurtsvanKessel, C., de Vries, R., van der Kuy, H., Sablerolles, R., Rietdijk, W., Goorhuis, A., Postma, D., Visser, L., Koopmans, M., Dalm, V, Kootstra, N., Huckriede, A., Lafeber, M., van Baarle, D., GeurtsvanKessel, C., de Vries, R., and van der Kuy, H.
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- 2022
6. Vaccination against SARS-CoV-2 in patients receiving chemotherapy, immunotherapy, or chemo-immunotherapy for solid tumors
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Oosting, S., Van der Veldt, A. A. M., GeurtsvanKessel, C. H., Fehrmann, R. S. N., Van Binnendijk, R. S., Dingemans, A-M. C., Smit, E. F. F., Hiltermann, T. J. N., Den Hartog, G., Jalving, M., Westphal, T., Battacharya, A., van der Heiden, M., Blank, C. U., Koopmans, M. P., van Els, C. A., Rots, N. Y., van Baarle, D., Haanen, J. B. A. G., de Vries, E. G., Guided Treatment in Optimal Selected Cancer Patients (GUTS), Damage and Repair in Cancer Development and Cancer Treatment (DARE), Translational Immunology Groningen (TRIGR), and Targeted Gynaecologic Oncology (TARGON)
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- 2021
7. Late Breaking Abstract - Air and surface contamination with SARS-CoV-2 in rooms of infected nursing home residents: the Netherlands
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Linde, K J, primary, Meijer, P, additional, Kluytmans, J A J W, additional, Kluytmans-Van Den Bergh, M F Q, additional, Pas, S D, additional, Geurtsvankessel, C, additional, Koopmans, M P G, additional, Meier, M, additional, Raben, C R, additional, Spithoven, J, additional, Tersteeg-Zijderveld, M H G, additional, Heederik, D J J, additional, Wouters, I M, additional, and Dohmen, W, additional
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- 2021
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8. SARS-CoV-2 transmission from presymptomatic meeting attendee, Germany
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Hijnen, D., GeurtsvanKessel, C., Marzano, A. V., Eyerich, K., Giménez-Arnau, A. M., Joly, P., Vestergaard, C., Sticherling, M., Schmidt, E., Lee, Vernon J., Dermatology, and Virology
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Pediatrics ,face-to-face contact ,Epidemiology ,lcsh:Medicine ,Disease ,Pneumonia, Viral/diagnosis ,medicine.disease_cause ,Severity of Illness Index ,Disease Outbreaks ,0302 clinical medicine ,COVID-19 Testing ,Germany ,Pandemic ,030212 general & internal medicine ,Coronavirus ,biology ,Transmission (medicine) ,SARS-CoV-2 Transmission from Presymptomatic Meeting Attendee, Germany ,transmission ,handshake ,Middle Aged ,Infectious Diseases ,coronavirus disease ,Coronavirus Infections ,severe acute respiratory syndrome coronavirus 2 ,Microbiology (medical) ,Adult ,medicine.medical_specialty ,Hand shaking ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,030231 tropical medicine ,Pneumonia, Viral ,Germany/epidemiology ,lcsh:Infectious and parasitic diseases ,Betacoronavirus/pathogenicity ,03 medical and health sciences ,Betacoronavirus ,respiratory infections ,medicine ,Research Letter ,Humans ,lcsh:RC109-216 ,viruses ,aerosolization ,Pandemics ,Clinical Laboratory Techniques/methods ,Coronavirus Infections/diagnosis ,business.industry ,Clinical Laboratory Techniques ,SARS-CoV-2 ,lcsh:R ,COVID-19 ,Congresses as Topic ,biology.organism_classification ,zoonoses ,Asymptomatic Diseases ,Contact Tracing/statistics & numerical data ,Contact Tracing ,business ,Tomography, X-Ray Computed ,Contact tracing - Abstract
During a meeting in Munich, Germany, a presymptomatic attendee with severe acute respiratory syndrome coronavirus 2 infected at least 11 of 13 other participants. Although 5 participants had no or mild symptoms, 6 had typical coronavirus disease, without dyspnea. Our findings suggest hand shaking and face-to-face contact as possible modes of transmission.
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- 2020
9. SARS-CoV-2-Specific Antibody Detection for Seroepidemiology: A Multiplex Analysis Approach Accounting for Accurate Seroprevalence
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den Hartog, G., Schepp, R.M., Kuijer, M., GeurtsvanKessel, C., Beek, J.H.G.M. (Janko) van, Rots, N., Koopmans D.V.M., M.P.G. (Marion), van der Klis, FRM, van Binnendijk, RS, den Hartog, G., Schepp, R.M., Kuijer, M., GeurtsvanKessel, C., Beek, J.H.G.M. (Janko) van, Rots, N., Koopmans D.V.M., M.P.G. (Marion), van der Klis, FRM, and van Binnendijk, RS
- Abstract
Background. The COVID-19 pandemic necessitates better understanding of the kinetics of antibody production induced by infection with SARS-CoV-2. We aimed to develop a high-throughput multiplex assay to detect antibodies to SARS-CoV-2 to assess immunity to the virus in the general population. Methods. Spike protein subunits S1 and receptor binding domain, and nucleoprotein were coupled to microspheres. Sera collected before emergence of SARS-CoV-2 (n = 224) and of non-SARS-CoV-2 influenza-like illness (n = 184), and laboratory-confirmed cases of SARS-CoV-2 infection (n = 115) with various severities of COVID-19 were tested for SARS-CoV-2–specific IgG concentrations. Results. Our assay discriminated SARS-CoV-2–induced antibodies and those induced by other viruses. The assay specificity was 95.1%–99.0% with sensitivity 83.6%–95.7%. By merging the test results for all 3 antigens a specificity of 100% was achieved with a sensitivity of at least 90%. Hospitalized COVID-19 patients developed higher IgG concentrations and the rate of IgG production i
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- 2020
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10. Enhanced Enterovirus D68 Replication in Neuroblastoma Cells Is Associated with a Cell Culture-Adaptive Amino Acid Substitution in VP1
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Ayudhya, S.S.N., Meijer, A., Bauer, L., Munnink, B.O., Embregts, C., Leijten, L.M.E. (Lonneke), Siegers, J.Y. (Jurre), Laksono, BM, van Kuppeveld, F., Kuiken, T. (Thijs), GeurtsvanKessel, C., Riel, D.A.J. (Debby) van, Ayudhya, S.S.N., Meijer, A., Bauer, L., Munnink, B.O., Embregts, C., Leijten, L.M.E. (Lonneke), Siegers, J.Y. (Jurre), Laksono, BM, van Kuppeveld, F., Kuiken, T. (Thijs), GeurtsvanKessel, C., and Riel, D.A.J. (Debby) van
- Abstract
Since its emergence in the United States in 2014, enterovirus D68 (EV-D68) has been and is associated with severe respiratory diseases and acute flaccid myelitis. Even though EV-D68 has been shown to replicate in different neuronal cells in vitro, it is currently poorly understood which viral factors contribute to the ability to replicate efficiently in cells of the central nervous system and whether this feature is a clade-specific feature. Here, we determined the replication kinetics of clinical EV-D68 isolates from (sub)clades A, B1, B2, B3, and D1 in human neuroblastoma cells (SK-N-SH). Subsequently, we compared sequences to identify viral factors associated with increased viral replication. All clinical isolates replicated in SK-N-SH cells, although there was a large difference in efficiency. Efficient replication of clinical isolates was associated with an amino acid substitution at position 271 of VP1 (E271K), which was acquired during virus propagation in vitro. Recognition of heparan sulfate in addition to sialic acids was associated with increased attachment, infection, and replication. Removal of heparan sulfate resulted in a decrease in attachment, internalization, and replication of viruses with E271K. Taken together, our study suggests that the replication kinetics of EV-D68 isolates in SKN-SH cells is not a clade-specific feature. However, recognition of heparan sulfate as an additional receptor had a large effect on phenotypic characteristics in vitro. These observations emphasize the need to compare sequences from virus stocks with clinical isolates in order to retrieve phenotypic characteristics from original virus isolates. IMPORTANCE Enterovirus D68 (EV-D68) causes mild to severe respiratory disease and is associated with acute flaccid myelitis since 2014. Currently, the understanding of the ability of EV-D68 to replicate in the central nervous system (CNS), and whether it is associated with a specific clade of EV-D68 viruses or specific viral fa
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- 2020
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11. Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans
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Oude Munnink, B.B., Sikkema, R.S., Nieuwenhuijse, D.F., Molenaar, R.J., Munger, E., Molenkamp, R., Spek, A. van der, Tolsma, P., Rietveld, A., Brouwer, M., Bouwmeester-Vincken, N., Harders, F., Hakze-van der Honing, R., Wegdam-Blans, M.C.A., Bouwstra, R.J., GeurtsvanKessel, C., Eijk, A.A. van der, Velkers, F.C., Smit, L.A.M., Stegeman, A., Koopmans, M.P.G., Poel, W.H.M. van der, Oude Munnink, B.B., Sikkema, R.S., Nieuwenhuijse, D.F., Molenaar, R.J., Munger, E., Molenkamp, R., Spek, A. van der, Tolsma, P., Rietveld, A., Brouwer, M., Bouwmeester-Vincken, N., Harders, F., Hakze-van der Honing, R., Wegdam-Blans, M.C.A., Bouwstra, R.J., GeurtsvanKessel, C., Eijk, A.A. van der, Velkers, F.C., Smit, L.A.M., Stegeman, A., Koopmans, M.P.G., and Poel, W.H.M. van der
- Abstract
Animal experiments have shown that non-human primates, cats, ferrets, hamsters, rabbits and bats can be infected by SARS-CoV-2. In addition, SARS-CoV-2 RNA has been detected in felids, mink and dogs in the field. Here, we describe an in-depth investigation using whole genome sequencing of outbreaks on 16 mink farms and the humans living or working on these farms. We conclude that the virus was initially introduced from humans and has since evolved, most likely reflecting widespread circulation among mink in the beginning of the infection period several weeks prior to detection. Despite enhanced biosecurity, early warning surveillance and immediate culling of infected farms, transmission occurred between mink farms in three big transmission clusters with unknown modes of transmission. Sixty-eight percent (68%) of the tested mink farm residents, employees and/or contacts had evidence of SARS-CoV-2 infection. Where whole genomes were available, these persons were infected with strains with an animal sequence signature, providing evidence of animal to human transmission of SARS-CoV-2 within mink farms.
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- 2020
12. Case Report: Adequate T and B Cell Responses in a SARS-CoV-2 Infected Patient After Immune Checkpoint Inhibition
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de Joode, K., primary, Oostvogels, A. A. M., additional, GeurtsvanKessel, C. H., additional, de Vries, R. D., additional, Mathijssen, R. H. J., additional, Debets, R., additional, and van der Veldt, A. A. M., additional
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- 2021
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13. Bat Bites are Only Skin Deep, But Dog Bites Go Clean to the Bone: Implications of Comparative Pathogenesis in Reservoir Hosts for Human Rabies
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Begeman, L., primary, GeurtsvanKessel, C., additional, Finke, S., additional, Freuling, C.M., additional, Koopmans, M., additional, Müller, T., additional, Ruigrok, T.J.H., additional, and Kuiken, T., additional
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- 2018
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14. Double-negative T resident memory cells of the lung react to influenza virus infection via CD11chi dendritic cells
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Neyt, K, primary, GeurtsvanKessel, C H, additional, and Lambrecht, B N, additional
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- 2016
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15. Ross River virus disease in two Dutch travellers returning from Australia, February to April 2015
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Reusken, C, Cleton, N, Medonça Melo, M, Visser, C, GeurtsvanKessel, C, Bloembergen, P, Koopmans, M, Schmidt-Chanasit, J, van Genderen, P, Reusken, C, Cleton, N, Medonça Melo, M, Visser, C, GeurtsvanKessel, C, Bloembergen, P, Koopmans, M, Schmidt-Chanasit, J, and van Genderen, P
- Abstract
We report two cases of Ross River virus (RRV) infection in Dutch travellers who visited Australia during February to April 2015. These cases coincided with the largest recorded outbreak of RRV disease in Australia since 1996. This report serves to create awareness among physicians to consider travel-related RRV disease in differential diagnosis of patients with fever, arthralgia and/or rash returning from the South Pacific area, and to promote awareness among professionals advising travellers to this region.
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- 2015
16. Ross River virus disease in two Dutch travellers returning from Australia, February to April 2015
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Reusken, C, primary, Cleton, N, additional, Medonça Melo, M, additional, Visser, C, additional, GeurtsvanKessel, C, additional, Bloembergen, P, additional, Koopmans, M, additional, Schmidt-Chanasit, J, additional, and van Genderen, P, additional
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- 2015
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17. Yellow fever in a traveller returning from Suriname to the Netherlands, March 2017.
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Wouthuyzen-Bakker, M., Knoester, M., van den Berg, A. P., GeurtsvanKessel, C. H., Koopmans, M. P., Van Leer-Buter, C., Velthuis, B. Oude, Pas, S. D., Ruijs, WL, Schmidt-Chanasit, J., Vreden, S. G., van der Werf, TS, Reusken, C. B., and Bierman, W. F.
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- 2017
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18. Evidence for Influenza Virus CNS Invasion Along the Olfactory Route in an Immunocompromised Infant
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van Riel, D., primary, Leijten, L. M., additional, Verdijk, R. M., additional, GeurtsvanKessel, C., additional, van der Vries, E., additional, van Rossum, A. M. C., additional, Osterhaus, A. D. M. E., additional, and Kuiken, T., additional
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- 2014
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19. Double-negative T resident memory cells of the lung react to influenza virus infection via CD11chi dendritic cells.
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Neyt, K, GeurtsvanKessel, C H, and Lambrecht, B N
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- 2016
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20. Longitudinal follow-up of Zika virus RNA in semen of a traveller returning from Barbados to the Netherlands with Zika virus disease, March 2016.
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Reusken, C., Pas, S., GeurtsvanKessel, C., Mögling, R., van Kampen, J., Langerak, T., Koopmans, M., van der Eijk, A., and van Gorp, E.
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- 2016
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21. Division of labor between dendritic cell subsets of the lung
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GeurtsvanKessel, C H, primary and Lambrecht, B N, additional
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- 2008
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22. Double-negative T resident memory cells of the lung react to influenza virus infection via CD11chidendritic cells
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Neyt, K, GeurtsvanKessel, C H, and Lambrecht, B N
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Immunity to Influenza A virus (IAV) is controlled by conventional TCRαβ+CD4+and CD8+T lymphocytes, which mediate protection or cause immunopathology. Here, we addressed the kinetics, differentiation, and antigen specificity of CD4−CD8−double-negative (DN) T cells. DNT cells expressed intermediate levels of TCR/CD3 and could be further divided in γδ T cells, CD1d-reactive type I NKT cells, NK1.1+NKT-like cells, and NK1.1−DNT cells. NK1.1−DNT cells had a separate antigen-specific repertoire in the steady-state lung, and expanded rapidly in response to IAV infection, irrespectively of the severity of infection. Up to 10% of DNT cells reacted to viral nucleoprotein. Reinfection experiments with heterosubtypic IAV revealed that viral replication was a major trigger for recruitment. Unlike conventional T cells, the NK1.1−DNT cells were in a preactivated state, expressing memory markers CD44, CD11a, CD103, and the cytotoxic effector molecule FasL. DNT cells resided in the lung parenchyma, protected from intravascular labeling with CD45 antibody. The recruitment and maintenance of CCR2+CCR5+CXCR3+NK1.1−DNT cells depended on CD11chidendritic cells (DCs). Functionally, DNT cells controlled the lung DC subset balance, suggesting they might act as immunoregulatory cells. In conclusion, we identify activation of resident memory NK1.1−DNT cells as an integral component of the mucosal immune response to IAV infection.
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- 2016
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23. Use of a diagnostic Puumala virus real-time RT-PCR in an orthohantavirus endemic region in the Netherlands.
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Geeraedts F, Wevers M, Bosma F, Boer Md, Brinkman JN, Delsing C, GeurtsvanKessel C, Rockx B, van der Zanden A, and Laverman GD
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- Humans, Netherlands epidemiology, Antibodies, Viral blood, Reverse Transcriptase Polymerase Chain Reaction methods, Hemorrhagic Fever with Renal Syndrome diagnosis, Hemorrhagic Fever with Renal Syndrome virology, Hemorrhagic Fever with Renal Syndrome epidemiology, Orthohantavirus genetics, Orthohantavirus isolation & purification, Orthohantavirus classification, Immunoglobulin M blood, Male, Female, Endemic Diseases, Hantavirus Infections diagnosis, Hantavirus Infections epidemiology, Hantavirus Infections virology, Serologic Tests methods, Puumala virus isolation & purification, Puumala virus genetics, Real-Time Polymerase Chain Reaction methods, RNA, Viral genetics
- Abstract
Laboratory diagnosis of orthohantavirus infection is primarily based on serology. However, for a confirmed serological diagnosis, evaluation of a follow-up serum sample is essential, which is time consuming and causes delay. Real-time reverse transcription polymerase chain reaction (RT-PCR) tests, if positive, provide an immediate and definitive diagnosis, and accurately identify the causative agent, where the discriminative nature of serology is suboptimal. We re-evaluated sera from orthohantavirus-suspected clinical cases in the Dutch regions of Twente and Achterhoek from July 2014 to April 2016 for the presence of Puumala orthohantavirus (PUUV), Tula orthohantavirus (TULV), and Seoul orthohantavirus (SEOV) RNA. PUUV RNA was detected in 11% of the total number ( n = 85) of sera tested, in 50% of sera positive for anti-PUUV/TULV IgM ( n = 16), and in 1.4% of sera negative or indeterminate for anti-PUUV/TULV IgM ( n = 69). No evidence was found for the presence of TULV or SEOV viral RNA. Based on these findings, we propose two algorithms to implement real-time RT-PCR testing in routine orthohantavirus diagnostics, which optimally provide clinicians with early confirmed diagnoses and could prevent possible further invasive testing and treatment., Importance: The addition of a real-time reverse transcription polymerase chain reaction test to routine orthohantavirus diagnostics may better aid clinical decision making than the use of standard serology tests alone. Awareness by clinicians and clinical microbiologists of this advantage may ultimately lead to a reduction in over-hospitalization and unnecessary invasive diagnostic procedures., Competing Interests: The authors declare no conflict of interest.
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- 2024
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24. Clinical and Virological Outcome of Monoclonal Antibody Therapies Across SARS-CoV-2 Variants in 245 Immunocompromised Patients: A Multicenter Prospective Cohort Study.
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Huygens S, GeurtsvanKessel C, Gharbharan A, Bogers S, Worp N, Boter M, Bax HI, Kampschreur LM, Hassing RJ, Fiets RB, Levenga H, Afonso PM, Koopmans M, Rijnders BJA, and Oude Munnink BB
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- Humans, Female, Male, Middle Aged, Prospective Studies, Aged, Antiviral Agents therapeutic use, Adult, Treatment Outcome, Mutation, SARS-CoV-2 immunology, SARS-CoV-2 genetics, Immunocompromised Host, Antibodies, Monoclonal therapeutic use, COVID-19 immunology, COVID-19 virology, COVID-19 Drug Treatment, Antibodies, Monoclonal, Humanized therapeutic use
- Abstract
Background: Immunocompromised patients (ICPs) have an increased risk for a severe and prolonged COVID-19. SARS-CoV-2 monoclonal antibodies (mAbs) were extensively used in these patients, but data from randomized trials that focus on ICPs are lacking. We evaluated the clinical and virological outcome of COVID-19 in ICPs treated with mAbs across SARS-CoV-2 variants., Methods: In this multicenter prospective cohort study, we enrolled B-cell- and/or T-cell-deficient patients treated with casirivimab/imdevimab, sotrovimab, or tixagevimab/cilgavimab. SARS-CoV-2 RNA was quantified and sequenced weekly, and time to viral clearance, viral genome mutations, hospitalization, and death rates were registered., Results: Two hundred and forty five patients infected with the Delta (50%) or Omicron BA.1, 2, or 5 (50%) variant were enrolled. Sixty-seven percent were vaccinated; 78 treated as outpatients, of whom 2 required hospital admission, but both survived. Of the 159 patients hospitalized at time of treatment, 43 (27%) required mechanical ventilation or died. The median time to viral clearance was 14 days (interquartile range, 7-22); however, it took >30 days in 15%. Resistance-associated spike mutations emerged in 9 patients in whom the median time to viral clearance was 63 days (95% confidence interval, 57-69; P < .001). Spike mutations were observed in 1 of 42 (2.4%) patients after treatment with 2 active mAbs, in 5 of 34 (14.7%) treated with actual monotherapy (sotrovimab), and 3 of 20 (12%) treated with functional monotherapy (ie, tixagevimab/cilgavimab against tixagevimab-resistant variant)., Conclusions: Despite treatment with mAbs, morbidity and mortality of COVID-19 in ICPs remained substantial. Combination antiviral therapy should be further explored and may be preferred in severely ICPs., Competing Interests: Potential conflicts of interest. B. R. reports membership on advisory boards for AstraZeneca, Roche, and Pfizer; and receipt of consulting fees from Roche, AstraZeneca and Pfizer. All other authors report no potential conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed., (© The Author(s) 2024. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
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- 2024
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25. Author Correction: Prospective individual patient data meta-analysis of two randomized trials on convalescent plasma for COVID-19 outpatients.
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Millat-Martinez P, Gharbharan A, Alemany A, Rokx C, Geurtsvankessel C, Papageorgiou G, van Geloven N, Jordans C, Groeneveld G, Swaneveld F, van der Schoot E, Corbacho-Monné M, Ouchi D, Piccolo Ferreira F, Malchair P, Videla S, García García V, Ruiz-Comellas A, Ramírez-Morros A, Rodriguez Codina J, Amado Simon R, Grifols JR, Blanco J, Blanco I, Ara J, Bassat Q, Clotet B, Baro B, Troxel A, Zwaginga JJ, Mitjà O, and Rijnders BJA
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- 2024
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26. The impact of BNT162b2 mRNA vaccine on adaptive and innate immune responses.
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Föhse K, Geckin B, Zoodsma M, Kilic G, Liu Z, Röring RJ, Overheul GJ, van de Maat J, Bulut O, Hoogerwerf JJ, Ten Oever J, Simonetti E, Schaal H, Adams O, Müller L, Ostermann PN, van de Veerdonk FL, Joosten LAB, Haagmans BL, van Crevel R, van Rij RP, GeurtsvanKessel C, de Jonge MI, Li Y, Domínguez-Andrés J, and Netea MG
- Abstract
The mRNA-based BNT162b2 protects against severe disease and mortality caused by SARS-CoV-2 via induction of specific antibody and T-cell responses. Much less is known about its broad effects on immune responses against other pathogens. Here, we investigated the adaptive immune responses induced by BNT162b2 vaccination against various SARS-CoV-2 variants and its effects on the responsiveness of immune cells upon stimulation with heterologous stimuli. BNT162b2 vaccination induced effective humoral and cellular immunity against SARS-CoV-2 that started to wane after six months. We also observed long-term transcriptional changes in immune cells after vaccination. Additionally, vaccination with BNT162b2 modulated innate immune responses as measured by inflammatory cytokine production after stimulation - higher IL-1/IL-6 release and decreased IFN-α production. Altogether, these data expand our knowledge regarding the overall immunological effects of this new class of vaccines and underline the need for additional studies to elucidate their effects on both innate and adaptive immune responses., Competing Interests: Declaration of Competing Interest M.G.N and L.A.B.J are scientific founders of TTxD and Lemba., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2023
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27. Factors associated with long-term antibody response after COVID-19 vaccination in patients treated with systemic treatment for solid tumors.
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Oosting SF, van der Veldt AAM, Fehrmann RSN, Bhattacharya A, van Binnendijk RS, GeurtsvanKessel CH, Dingemans AC, Smit EF, Hiltermann TJN, den Hartog G, Jalving M, Westphal TT, de Wilt F, Ernst SM, Boerma A, van Zijl L, Rimmelzwaan GF, Kvistborg P, van Els CACM, Rots NY, van Baarle D, Haanen JBAG, and de Vries EGE
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- Humans, COVID-19 Vaccines, Antibody Formation, Vaccination, COVID-19, Neoplasms drug therapy
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- 2023
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28. Antigenic mapping of emerging SARS-CoV-2 omicron variants BM.1.1.1, BQ.1.1, and XBB.1.
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Mykytyn AZ, Rosu ME, Kok A, Rissmann M, van Amerongen G, Geurtsvankessel C, de Vries RD, Munnink BBO, Smith DJ, Koopmans MPG, Lamers MM, Fouchier RAM, and Haagmans BL
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- Humans, SARS-CoV-2 genetics, COVID-19
- Abstract
Competing Interests: This work was financially supported by the Health∼Holland grant LSHM19136 to BLH; cofunded by the PPP Allowance made available by the Health∼Holland, Top Sector Life Sciences & Health, to stimulate public-private partnerships, and the European Union's Horizon 2020 research and innovation program under grant number 101003589 (RECoVER; to MPGK) and EU funding grant agreement number 874735(VEO). BLH, RAMF, DJS, and MPGK are supported by the NIH/NIAID Centers of Excellence for Influenza Research and Response under contract 75N93021C00014-Icahn School of Medicine at Mt Sinai. MER and AK contributed equally.
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- 2023
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29. Outpatient convalescent plasma therapy for high-risk patients with early COVID-19: a randomized placebo-controlled trial.
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Gharbharan A, Jordans C, Zwaginga L, Papageorgiou G, van Geloven N, van Wijngaarden P, den Hollander J, Karim F, van Leeuwen-Segarceanu E, Soetekouw R, Lammers J, Postma D, Kampschreur L, Groeneveld G, Swaneveld F, van der Schoot CE, Götz H, Haagmans B, Koopmans M, Bogers S, Geurtsvankessel C, Zwaginga JJ, Rokx C, and Rijnders B
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- Humans, Middle Aged, SARS-CoV-2, Outpatients, COVID-19 Serotherapy, Immunization, Passive, Treatment Outcome, COVID-19 therapy, COVID-19 etiology
- Abstract
Objectives: The potential benefit of convalescent plasma (CP) therapy for coronavirus disease 2019 (COVID-19) is highest when administered early after symptom onset. Our objective was to determine the effectiveness of CP therapy in improving the disease course of COVID-19 among high-risk outpatients., Methods: A multicentre, double-blind randomized trial was conducted comparing 300 mL of CP with non-CP. Patients were ≥50 years, were symptomatic for <8 days, had confirmed RT-PCR or antigen test result for COVID-19 and had at least one risk factor for severe COVID-19. The primary endpoint was the highest score on a 5-point ordinal scale ranging from fully recovered (score = 1) or not (score = 2) on day 7, over hospital admission (score = 3), intensive care unit admission (score = 4) and death (score = 5) in the 28 days following randomization. Secondary endpoints were hospital admission, symptom duration and viral RNA excretion., Results: After the enrolment of 421 patients and the transfusion in 416 patients, recruitment was discontinued when the countrywide vaccination uptake in those aged >50 years was 80%. Patients had a median age of 60 years, symptoms for 5 days, and 207 of 416 patients received CP therapy. During the 28 day follow-up, 28 patients were hospitalized and two died. The OR for an improved disease severity score with CP was 0.86 (95% credible interval, 0.59-1.22). The OR was 0.58 (95% CI, 0.33-1.02) for patients with ≤5 days of symptoms. The hazard ratio for hospital admission was 0.61 (95% CI, 0.28-1.34). No difference was found in viral RNA excretion or in the duration of symptoms., Conclusions: In patients with early COVID-19, CP therapy did not improve the 5-point disease severity score., (Copyright © 2022 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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30. One-year data on immunogenicity and breakthrough infections in patients with solid tumors vaccinated against COVID-19 during systemic cancer treatment.
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van der Veldt AAM, Oosting SF, Fehrmann RSN, GeurtsvanKessel CH, van Binnendijk RS, Dingemans AC, Smit EF, Hiltermann TJN, Hartog GD, Jalving M, Westphal TT, Bhattacharya A, de Wilt F, Ernst SM, Boerma A, van Zijl L, Rimmelzwaan GF, Kvistborg P, van Els CACM, Rots NY, van Baarle D, Haanen JBAG, and de Vries EGE
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- Humans, Breakthrough Infections, Patients, COVID-19, Neoplasms
- Abstract
Competing Interests: Disclosure AAMvdV reports consultancy fees from BMS, Merck Sharp & Dohme (MSD), Merck, Sanofi, Eisai, Pfizer, Ipsen, Roche, Pierre Fabre, and Novartis; and travel support from Bayer, Roche, Novartis, and Pfizer (all paid to the institution). SFO reports research grants from Novartis and Celldex Therapeutics; and consultancy fees from Genmab, Merck, and Bristol Myers Squibb (BMS; all paid to the institution). AMCD reports consultancy fees from Roche, Boehringer Ingelheim, Amgen, Bayer, PharmaMar, Sanofi, and Daiichi (all paid to the institution); speaker fees from Eli Lilly, AstraZeneca, Jansen, Chiesi, and Takeda (all paid to the institution); and research support from BMS, AbbVie, and Amgen (all paid to the institution). EFS reports consultancy fees from Eli Lilly (all paid to the institution); speaker fees from AstraZeneca, Boehringer Ingelheim, and Daiichi Sankyo (all paid to the institution); and advisory board fees from AstraZeneca, Bayer, BMS, MSD, Merck, Novartis, Pfizer, Roche Genentech, Roche Diagnostics, and Takeda (all paid to the institution). TJNH reports advisory board fees from BMS, AstraZeneca, Merck, Pfizer, Roche, and MSD (all paid to the institution). MJ reports consultancy fees from AstraZeneca and Pierre Fabre (all paid to the institution). GFR reports funding from the Alexander von Humboldt Foundation (paid to the institution). JBAGH reports consultancy fees from Achilles Therapeutics, BioNTech, BMS, Immunocore, Instil Bio, Molecular Partners, MSD, Gadeta, Merck Serono, Neogene Therapeutics, Novartis, Pfizer, PokeAcel, Roche/Genentech, Sanofi, and T-Knife (paid to the institution); consultancy fees from Neogene Tx; speaker fees from Ipsen, Eisai, and Novartis (paid to the institution); research grants from Asher-Bio, BMS, BioNTech, MSD, and Novartis (paid to the institution); and stock in Neogene Tx. EGEdV reports an advisory role at Daiichi Sankyo, NSABP, and Sanofi; and research funding from Amgen, AstraZeneca, Bayer, Chugai Pharma, Crescendo, CytomX Therapeutics, G1 Therapeutics, Genentech, Nordic Nanovector, Radius Health, Regeneron, Roche, Servier, and Synthon (all paid to the institution). All other authors have declared no conflicts of interest.
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- 2023
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31. Risks of SARS-CoV-2 transmission between free-ranging animals and captive mink in the Netherlands.
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Sikkema RS, Begeman L, Janssen R, Wolters WJ, Geurtsvankessel C, de Bruin E, Hakze-van der Honing RW, Eblé P, van der Poel WHM, van den Brand JMA, Slaterus R, La Haye M, Koopmans MPG, Velkers F, and Kuiken T
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- Animals, Mink, SARS-CoV-2, Netherlands epidemiology, RNA, Viral, Farms, COVID-19 epidemiology, COVID-19 veterinary, Chiroptera, Mustelidae
- Abstract
In the Netherlands, 69 of the 126 (55%) mink farms in total became infected with SARS-CoV-2 in 2020. Despite strict biosecurity measures and extensive epidemiological investigations, the main transmission route remained unclear. A better understanding of SARS-CoV-2 transmission between mink farms is of relevance for countries where mink farming is still common practice and can be used as a case study to improve future emerging disease preparedness. We assessed whether SARS-CoV-2 spilled over from mink to free-ranging animals, and whether free-ranging animals may have played a role in farm-to-farm transmission in the Netherlands. The study encompassed farm visits, farm questionnaires, expert workshops and SARS-CoV-2 RNA and antibody testing of samples from target animal species (bats, birds and free-ranging carnivores). In this study, we show that the open housing system of mink allowed access to birds, bats and most free-ranging carnivores, and that direct and indirect contact with mink was likely after entry, especially for free-ranging carnivores and birds. This allowed SARS-CoV-2 exposure to animals entering the mink farm, and subsequent infection or mechanical carriage by the target animal species. Moreover, mink can escape farms in some cases, and two SARS-CoV-2-positive mink were found outside farm premises. No other SARS-CoV-2-RNA-positive free-ranging animals were detected, suggesting there was no abundant circulation in the species tested during the study period. To investigate previous SARS-CoV-2 infections, SARS-CoV-2 antibody detection using lung extracts of carcasses was set up and validated. One tested beech marten did have SARS-CoV-2 antibodies, but the closest SARS-CoV-2-infected mink farm was outside of its home range, making infection at a mink farm unlikely. Knowing that virus exchange between different species and the formation of animal reservoirs affects SARS-CoV-2 evolution, continued vigilance and monitoring of mink farms and surrounding wildlife remains vital., (© 2022 The Authors. Transboundary and Emerging Diseases published by Wiley-VCH GmbH.)
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- 2022
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32. Antigenic cartography of SARS-CoV-2 reveals that Omicron BA.1 and BA.2 are antigenically distinct.
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Mykytyn AZ, Rissmann M, Kok A, Rosu ME, Schipper D, Breugem TI, van den Doel PB, Chandler F, Bestebroer T, de Wit M, van Royen ME, Molenkamp R, Oude Munnink BB, de Vries RD, GeurtsvanKessel C, Smith DJ, Koopmans MPG, Rockx B, Lamers MM, Fouchier RAM, and Haagmans BL
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- Animals, Cell Line, Cricetinae, Humans, Immune Sera, COVID-19, SARS-CoV-2 genetics
- Abstract
The emergence and rapid spread of SARS-CoV-2 variants may affect vaccine efficacy substantially. The Omicron variant termed BA.2, which differs substantially from BA.1 based on genetic sequence, is currently replacing BA.1 in several countries, but its antigenic characteristics have not yet been assessed. Here, we used antigenic cartography to quantify and visualize antigenic differences between early SARS-CoV-2 variants (614G, Alpha, Beta, Gamma, Zeta, Delta, and Mu) using hamster antisera obtained after primary infection. We first verified that the choice of the cell line for the neutralization assay did not affect the topology of the map substantially. Antigenic maps generated using pseudo-typed SARS-CoV-2 on the widely used VeroE6 cell line and the human airway cell line Calu-3 generated similar maps. Maps made using authentic SARS-CoV-2 on Calu-3 cells also closely resembled those generated with pseudo-typed viruses. The antigenic maps revealed a central cluster of SARS-CoV-2 variants, which grouped on the basis of mutual spike mutations. Whereas these early variants are antigenically similar, clustering relatively close to each other in antigenic space, Omicron BA.1 and BA.2 have evolved as two distinct antigenic outliers. Our data show that BA.1 and BA.2 both escape vaccine-induced antibody responses as a result of different antigenic characteristics. Thus, antigenic cartography could be used to assess antigenic properties of future SARS-CoV-2 variants of concern that emerge and to decide on the composition of novel spike-based (booster) vaccines.
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- 2022
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33. Highly Divergent SARS-CoV-2 Alpha Variant in Chronically Infected Immunocompromised Person.
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Munnink BBO, Nijhuis RHT, Worp N, Boter M, Weller B, Verstrepen BE, GeurtsvanKessel C, Corsten MF, Russcher A, and Koopmans M
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- Humans, Immunocompromised Host, Netherlands, Spike Glycoprotein, Coronavirus genetics, COVID-19 immunology, Mutation, SARS-CoV-2 classification, SARS-CoV-2 genetics, SARS-CoV-2 immunology
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We detected a highly divergent SARS-CoV-2 Alpha variant in an immunocompromised person several months after the latest detection of the Alpha variant in the Netherlands. The patient was infected for 42 weeks despite several treatment regimens and disappearance of most clinical symptoms. We identified several potential immune escape mutations in the spike protein.
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- 2022
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34. Prospective individual patient data meta-analysis of two randomized trials on convalescent plasma for COVID-19 outpatients.
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Millat-Martinez P, Gharbharan A, Alemany A, Rokx C, Geurtsvankessel C, Papageorgiou G, van Geloven N, Jordans C, Groeneveld G, Swaneveld F, van der Schoot E, Corbacho-Monné M, Ouchi D, Piccolo Ferreira F, Malchair P, Videla S, García García V, Ruiz-Comellas A, Ramírez-Morros A, Rodriguez Codina J, Amado Simon R, Grifols JR, Blanco J, Blanco I, Ara J, Bassat Q, Clotet B, Baro B, Troxel A, Zwaginga JJ, Mitjà O, and Rijnders BJA
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- Bayes Theorem, Humans, Immunization, Passive, Middle Aged, Multicenter Studies as Topic, Outpatients, Randomized Controlled Trials as Topic, SARS-CoV-2, Treatment Outcome, COVID-19 Serotherapy, COVID-19 therapy
- Abstract
Data on convalescent plasma (CP) treatment in COVID-19 outpatients are scarce. We aimed to assess whether CP administered during the first week of symptoms reduced the disease progression or risk of hospitalization of outpatients. Two multicenter, double-blind randomized trials (NCT04621123, NCT04589949) were merged with data pooling starting when <20% of recruitment target was achieved. A Bayesian-adaptive individual patient data meta-analysis was implemented. Outpatients aged ≥50 years and symptomatic for ≤7days were included. The intervention consisted of 200-300mL of CP with a predefined minimum level of antibodies. Primary endpoints were a 5-point disease severity scale and a composite of hospitalization or death by 28 days. Amongst the 797 patients included, 390 received CP and 392 placebo; they had a median age of 58 years, 1 comorbidity, 5 days symptoms and 93% had negative IgG antibody-test. Seventy-four patients were hospitalized, 6 required mechanical ventilation and 3 died. The odds ratio (OR) of CP for improved disease severity scale was 0.936 (credible interval (CI) 0.667-1.311); OR for hospitalization or death was 0.919 (CI 0.592-1.416). CP effect on hospital admission or death was largest in patients with ≤5 days of symptoms (OR 0.658, 95%CI 0.394-1.085). CP did not decrease the time to full symptom resolution., Trial Registration: Clinicaltrials.gov NCT04621123 and NCT04589949., Registration: NCT04621123 and NCT04589949 on https://www., Clinicaltrials: gov., (© 2022. The Author(s).)
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- 2022
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35. From more testing to smart testing: data-guided SARS-CoV-2 testing choices, the Netherlands, May to September 2020.
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van Beek J, Igloi Z, Boelsums T, Fanoy E, Gotz H, Molenkamp R, van Kampen J, GeurtsvanKessel C, van der Eijk AA, van de Vijver D, and Koopmans M
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- Antigens, Viral analysis, COVID-19 Testing, Humans, Netherlands epidemiology, Sensitivity and Specificity, COVID-19 diagnosis, COVID-19 epidemiology, SARS-CoV-2 genetics
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BackgroundSARS-CoV-2 RT-PCR assays are more sensitive than rapid antigen detection assays (RDT) and can detect viral RNA even after an individual is no longer infectious. RDT can reduce the time to test and the results might better correlate with infectiousness.AimWe assessed the ability of five RDT to identify infectious COVID-19 cases and systematically recorded the turnaround time of RT-PCR testing.MethodsSensitivity of RDT was determined using a serially diluted SARS-CoV-2 stock with known viral RNA concentration. The probability of detecting infectious virus at a given viral load was calculated using logistic regression of viral RNA concentration and matched culture results of 78 specimens from randomly selected non-hospitalised cases. The probability of each RDT to detect infectious cases was calculated as the sum of the projected probabilities for viral isolation success for every viral RNA load found at the time of diagnosis in 1,739 confirmed non-hospitalised COVID-19 cases.ResultsThe distribution of quantification cycle values and estimated RNA loads for patients reporting to drive-through testing was skewed to high RNA loads. With the most sensitive RDT (Abbott and SD Biosensor), 97.30% (range: 88.65-99.77) of infectious individuals would be detected. This decreased to 92.73% (range: 60.30-99.77) for Coris BioConcept and GenBody, and 75.53% (range: 17.55-99.77) for RapiGEN. Only 32.9% of RT-PCR results were available on the same day as specimen collection.ConclusionThe most sensitive RDT detected infectious COVID-19 cases with high sensitivity and may considerably improve containment through more rapid isolation and contact tracing.
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- 2022
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36. Clinical evaluation of the SD Biosensor SARS-CoV-2 saliva antigen rapid test with symptomatic and asymptomatic, non-hospitalized patients.
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Igloi Z, Velzing J, Huisman R, Geurtsvankessel C, Comvalius A, IJpelaar J, van Beek J, Ensing R, Boelsums T, Koopmans M, and Molenkamp R
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- Adolescent, Adult, Aged, COVID-19 diagnosis, COVID-19 etiology, Carrier State virology, Female, Hospitalization, Humans, Male, Middle Aged, Nasopharynx virology, Sensitivity and Specificity, Young Adult, Biosensing Techniques methods, COVID-19 Serological Testing methods, Saliva virology
- Abstract
Background: Performance of the SD Biosensor saliva antigen rapid test was evaluated at a large designated testing site in non-hospitalized patients, with or without symptoms., Method: All eligible people over 18 years of age presenting for a booked appointment at the designated SARS-CoV-2 testing site were approached for inclusion and enrolled following verbal informed consent. One nasopharyngeal swab was taken to carry out the default antigen rapid test from which the results were reported back to the patient and one saliva sample was self-taken according to verbal instruction on site. This was used for the saliva antigen rapid test, the RT-PCR and for virus culture. Sensitivity of the saliva antigen rapid test was analyzed in two ways: i, compared to saliva RT-PCR; and ii, compared to virus culture of the saliva samples. Study participants were also asked to fill in a short questionnaire stating age, sex, date of symptom onset. Recommended time of ≥30mins since last meal, drink or cigarette if applicable was also recorded. The study was carried out in February-March 2021 for 4 weeks., Results: We could include 789 people with complete records and results. Compared to saliva RT-PCR, overall sensitivity and specificity of the saliva antigen rapid test was 66.1% and 99.6% which increased to 88.6% with Ct ≤30 cutoff. Analysis by days post onset did not result in higher sensitivities because the large majority of people were in the very early phase of disease ie <3 days post onset. When breaking down the data for symptomatic and asymptomatic individuals, sensitivity ranged from 69.2% to 50% respectively, however the total number of RT-PCR positive asymptomatic participants was very low (n = 5). Importantly, almost all culture positive samples were detected by the rapid test., Conclusion: Overall, the potential benefits of saliva antigen rapid test, could outweigh the lower sensitivity compared to nasopharyngeal antigen rapid test in a comprehensive testing strategy, especially for home/self-testing and in vulnerable populations like elderly, disabled or children where in intrusive testing is either not possible or causes unnecessary stress., Competing Interests: The authors have declared that no competing interests exist.
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- 2021
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37. Increasing the Efficiency of a National Laboratory Response to COVID-19: a Nationwide Multicenter Evaluation of 47 Commercial SARS-CoV-2 Immunoassays by 41 Laboratories.
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van den Beld MJC, Murk JL, Kluytmans J, Koopmans MPG, Reimerink J, van Loo IHM, Wegdam-Blans MCA, Zaaijer H, GeurtsvanKessel C, and Reusken C
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- Antibodies, Viral, COVID-19 Testing, Humans, Immunoassay, Immunoglobulin M, Laboratories, Multicenter Studies as Topic, Pandemics, Sensitivity and Specificity, COVID-19, SARS-CoV-2
- Abstract
In response to the worldwide pandemic of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and the subsequent antibody tests that flooded the market, a nationwide collaborative approach in the Netherlands was employed. Forty-one Dutch laboratories joined forces and shared their evaluation data to allow for the evaluation of a quantity of serological assays for SARS-CoV-2 that exceeds the capacity of each individual laboratory. As of April 2020, these performance data had been aggregated and shared in regularly updated reports with other laboratories, Dutch government, public health organizations, and the public. This frequently updated overview of assay performance increased the efficiency of our national laboratory response, supporting laboratories in their choice and implementation of assays. Aggregated performance data for 47 immunoassays for SARS-CoV-2 showed that none of the evaluated immunoassays that detect only IgM or IgA met the diagnostic criteria, indicating that they are not suitable for diagnosing acute infections. For the detection of IgG, only the Biozek Corona virus COVID rapid test, Euroimmun SARS-CoV-2 IgG, and Wantai SARS-CoV-2 antibody (Ab) ELISA met predefined performance criteria in hospitalized patients where samples were collected 14 days post-onset of symptoms (DPO), while for patients with mild or asymptomatic infections, only the Wantai SARS-CoV-2 Ab ELISA met the predefined performance criteria if samples were collected 14 days postonset. Here, we describe this unique nationwide collaboration during the onset of the COVID-19 pandemic; the collected data and their results are an example of what can be accomplished when forces are joined during a public health crisis.
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- 2021
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38. Effects of potent neutralizing antibodies from convalescent plasma in patients hospitalized for severe SARS-CoV-2 infection.
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Gharbharan A, Jordans CCE, GeurtsvanKessel C, den Hollander JG, Karim F, Mollema FPN, Stalenhoef-Schukken JE, Dofferhoff A, Ludwig I, Koster A, Hassing RJ, Bos JC, van Pottelberge GR, Vlasveld IN, Ammerlaan HSM, van Leeuwen-Segarceanu EM, Miedema J, van der Eerden M, Schrama TJ, Papageorgiou G, Te Boekhorst P, Swaneveld FH, Mueller YM, Schreurs MWJ, van Kampen JJA, Rockx B, Okba NMA, Katsikis PD, Koopmans MPG, Haagmans BL, Rokx C, and Rijnders BJA
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- Aged, Antibodies, Neutralizing blood, Antibodies, Viral blood, Blood Donors, COVID-19 blood, COVID-19 virology, Disease Progression, Female, Hospitalization, Humans, Immunization, Passive, Immunoglobulin G blood, Kaplan-Meier Estimate, Male, Middle Aged, Spike Glycoprotein, Coronavirus immunology, Treatment Outcome, COVID-19 Serotherapy, Antibodies, Neutralizing immunology, Antibodies, Viral immunology, COVID-19 immunology, COVID-19 therapy, Cytokines blood, SARS-CoV-2 immunology
- Abstract
In a randomized clinical trial of 86 hospitalized COVID-19 patients comparing standard care to treatment with 300mL convalescent plasma containing high titers of neutralizing SARS-CoV-2 antibodies, no overall clinical benefit was observed. Using a comprehensive translational approach, we unravel the virological and immunological responses following treatment to disentangle which COVID-19 patients may benefit and should be the focus of future studies. Convalescent plasma is safe, does not improve survival, has no effect on the disease course, nor does plasma enhance viral clearance in the respiratory tract, influence SARS-CoV-2 antibody development or serum proinflammatory cytokines levels. Here, we show that the vast majority of patients already had potent neutralizing SARS-CoV-2 antibodies at hospital admission and with comparable titers to carefully selected plasma donors. This resulted in the decision to terminate the trial prematurely. Treatment with convalescent plasma should be studied early in the disease course or at least preceding autologous humoral response development.
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- 2021
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39. Clinical Evaluation of Roche SD Biosensor Rapid Antigen Test for SARS-CoV-2 in Municipal Health Service Testing Site, the Netherlands.
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Igloi Z, Velzing J, van Beek J, van de Vijver D, Aron G, Ensing R, Benschop K, Han W, Boelsums T, Koopmans M, Geurtsvankessel C, and Molenkamp R
- Subjects
- Health Services, Humans, Netherlands epidemiology, SARS-CoV-2, Sensitivity and Specificity, Biosensing Techniques, COVID-19
- Abstract
Rapid detection of infection is essential for stopping the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The Roche SD Biosensor rapid antigen test for SARS-CoV-2 was evaluated in a nonhospitalized symptomatic population. We rapid-tested a sample onsite and compared results with those from reverse transcription PCR and virus culture. We analyzed date of onset and symptoms using data from a clinical questionnaire. Overall test sensitivity was 84.9% (95% CI 79.1-89.4) and specificity was 99.5% (95% CI 98.7-99.8). Sensitivity increased to 95.8% (95% CI 90.5-98.2) for persons who sought care within 7 days of symptom onset. Test band intensity and time to result correlated strongly with viral load; thus, strong positive results could be read before the recommended time. Approximately 98% of all viable specimens with cycle threshold <30 were detected. Rapid antigen tests can detect symptomatic SARS-CoV-2 infections in the early phase of disease, thereby identifying the most infectious persons.
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- 2021
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40. COVID-19 vaccination: the VOICE for patients with cancer.
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van der Veldt AAM, Oosting SF, Dingemans AC, Fehrmann RSN, GeurtsvanKessel C, Jalving M, Rimmelzwaan GF, Kvistborg P, Blank CU, Smit EF, Lemmens VEEP, Hiltermann TJN, Koopmans MPG, Huckriede ALW, Rots NY, van Els CACM, van Baarle D, Haanen JBAG, and de Vries EGE
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- Antibodies, Viral blood, Humans, Longitudinal Studies, Neoplasms therapy, Prospective Studies, COVID-19 prevention & control, COVID-19 Vaccines immunology, Neoplasms immunology, SARS-CoV-2 immunology, Vaccination
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- 2021
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41. Duration and key determinants of infectious virus shedding in hospitalized patients with coronavirus disease-2019 (COVID-19).
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van Kampen JJA, van de Vijver DAMC, Fraaij PLA, Haagmans BL, Lamers MM, Okba N, van den Akker JPC, Endeman H, Gommers DAMPJ, Cornelissen JJ, Hoek RAS, van der Eerden MM, Hesselink DA, Metselaar HJ, Verbon A, de Steenwinkel JEM, Aron GI, van Gorp ECM, van Boheemen S, Voermans JC, Boucher CAB, Molenkamp R, Koopmans MPG, Geurtsvankessel C, and van der Eijk AA
- Subjects
- Aged, COVID-19 Testing, Female, Humans, Male, Middle Aged, Multivariate Analysis, Odds Ratio, RNA, Viral, Respiratory System virology, Viral Load, COVID-19 diagnosis, COVID-19 virology, SARS-CoV-2, Virus Shedding
- Abstract
Key questions in COVID-19 are the duration and determinants of infectious virus shedding. Here, we report that infectious virus shedding is detected by virus cultures in 23 of the 129 patients (17.8%) hospitalized with COVID-19. The median duration of shedding infectious virus is 8 days post onset of symptoms (IQR 5-11) and drops below 5% after 15.2 days post onset of symptoms (95% confidence interval (CI) 13.4-17.2). Multivariate analyses identify viral loads above 7 log
10 RNA copies/mL (odds ratio [OR] of 14.7 (CI 3.57-58.1; p < 0.001) as independently associated with isolation of infectious SARS-CoV-2 from the respiratory tract. A serum neutralizing antibody titre of at least 1:20 (OR of 0.01 (CI 0.003-0.08; p < 0.001) is independently associated with non-infectious SARS-CoV-2. We conclude that quantitative viral RNA load assays and serological assays could be used in test-based strategies to discontinue or de-escalate infection prevention and control precautions.- Published
- 2021
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42. Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans.
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Oude Munnink BB, Sikkema RS, Nieuwenhuijse DF, Molenaar RJ, Munger E, Molenkamp R, van der Spek A, Tolsma P, Rietveld A, Brouwer M, Bouwmeester-Vincken N, Harders F, Hakze-van der Honing R, Wegdam-Blans MCA, Bouwstra RJ, GeurtsvanKessel C, van der Eijk AA, Velkers FC, Smit LAM, Stegeman A, van der Poel WHM, and Koopmans MPG
- Subjects
- Animals, COVID-19 epidemiology, COVID-19 veterinary, Disease Outbreaks, Farms, Humans, Likelihood Functions, Mutation, Netherlands epidemiology, Phylogeny, RNA, Viral analysis, RNA, Viral genetics, SARS-CoV-2 classification, SARS-CoV-2 physiology, Whole Genome Sequencing, COVID-19 transmission, COVID-19 virology, Mink, SARS-CoV-2 genetics, SARS-CoV-2 isolation & purification, Zoonoses transmission, Zoonoses virology
- Abstract
Animal experiments have shown that nonhuman primates, cats, ferrets, hamsters, rabbits, and bats can be infected by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In addition, SARS-CoV-2 RNA has been detected in felids, mink, and dogs in the field. Here, we describe an in-depth investigation using whole-genome sequencing of outbreaks on 16 mink farms and the humans living or working on these farms. We conclude that the virus was initially introduced by humans and has since evolved, most likely reflecting widespread circulation among mink in the beginning of the infection period, several weeks before detection. Despite enhanced biosecurity, early warning surveillance, and immediate culling of animals in affected farms, transmission occurred between mink farms in three large transmission clusters with unknown modes of transmission. Of the tested mink farm residents, employees, and/or individuals with whom they had been in contact, 68% had evidence of SARS-CoV-2 infection. Individuals for which whole genomes were available were shown to have been infected with strains with an animal sequence signature, providing evidence of animal-to-human transmission of SARS-CoV-2 within mink farms., (Copyright © 2021, American Association for the Advancement of Science.)
- Published
- 2021
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43. Erratum for Sooksawasdi Na Ayudhya et al., "Enhanced Enterovirus D68 Replication in Neuroblastoma Cells Is Associated with a Cell Culture-Adaptive Amino Acid Substitution in VP1".
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Sooksawasdi Na Ayudhya S, Meijer A, Bauer L, Oude Munnink B, Embregts C, Leijten L, Siegers JY, Laksono BM, van Kuppeveld F, Kuiken T, GeurtsvanKessel C, and van Riel D
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- 2020
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44. Author Correction: Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands.
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Oude Munnink BB, Nieuwenhuijse DF, Stein M, O'Toole Á, Haverkate M, Mollers M, Kamga SK, Schapendonk C, Pronk M, Lexmond P, van der Linden A, Bestebroer T, Chestakova I, Overmars RJ, van Nieuwkoop S, Molenkamp R, van der Eijk AA, GeurtsvanKessel C, Vennema H, Meijer A, Rambaut A, van Dissel J, Sikkema RS, Timen A, and Koopmans M
- Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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- 2020
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45. SARS-CoV-2-Specific Antibody Detection for Seroepidemiology: A Multiplex Analysis Approach Accounting for Accurate Seroprevalence.
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den Hartog G, Schepp RM, Kuijer M, GeurtsvanKessel C, van Beek J, Rots N, Koopmans MPG, van der Klis FRM, and van Binnendijk RS
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- Adaptive Immunity, Adult, Aged, Aged, 80 and over, Area Under Curve, COVID-19, Case-Control Studies, Female, Humans, Immunoassay, Male, Middle Aged, Netherlands epidemiology, Nuclear Proteins immunology, Patient Acuity, ROC Curve, SARS-CoV-2, Seroconversion, Seroepidemiologic Studies, Spike Glycoprotein, Coronavirus immunology, Antibodies, Viral blood, Betacoronavirus immunology, Coronavirus Infections blood, Coronavirus Infections epidemiology, Immunoglobulin G blood, Pandemics, Pneumonia, Viral blood, Pneumonia, Viral epidemiology
- Abstract
Background: The COVID-19 pandemic necessitates better understanding of the kinetics of antibody production induced by infection with SARS-CoV-2. We aimed to develop a high-throughput multiplex assay to detect antibodies to SARS-CoV-2 to assess immunity to the virus in the general population., Methods: Spike protein subunits S1 and receptor binding domain, and nucleoprotein were coupled to microspheres. Sera collected before emergence of SARS-CoV-2 (n = 224) and of non-SARS-CoV-2 influenza-like illness (n = 184), and laboratory-confirmed cases of SARS-CoV-2 infection (n = 115) with various severities of COVID-19 were tested for SARS-CoV-2-specific IgG concentrations., Results: Our assay discriminated SARS-CoV-2-induced antibodies and those induced by other viruses. The assay specificity was 95.1%-99.0% with sensitivity 83.6%-95.7%. By merging the test results for all 3 antigens a specificity of 100% was achieved with a sensitivity of at least 90%. Hospitalized COVID-19 patients developed higher IgG concentrations and the rate of IgG production increased faster compared to nonhospitalized cases., Conclusions: The bead-based serological assay for quantitation of SARS-CoV-2-specific antibodies proved to be robust and can be conducted in many laboratories. We demonstrated that testing of antibodies against multiple antigens increases sensitivity and specificity compared to single-antigen-specific IgG determination., (© The Author(s) 2020. Published by Oxford University Press for the Infectious Diseases Society of America.)
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- 2020
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46. Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands.
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Oude Munnink BB, Nieuwenhuijse DF, Stein M, O'Toole Á, Haverkate M, Mollers M, Kamga SK, Schapendonk C, Pronk M, Lexmond P, van der Linden A, Bestebroer T, Chestakova I, Overmars RJ, van Nieuwkoop S, Molenkamp R, van der Eijk AA, GeurtsvanKessel C, Vennema H, Meijer A, Rambaut A, van Dissel J, Sikkema RS, Timen A, and Koopmans M
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- Betacoronavirus pathogenicity, COVID-19, Clinical Decision-Making, Coronavirus Infections epidemiology, Coronavirus Infections pathology, Coronavirus Infections virology, Humans, Netherlands epidemiology, Pneumonia, Viral epidemiology, Pneumonia, Viral pathology, Pneumonia, Viral virology, Public Health, SARS-CoV-2, Whole Genome Sequencing, Betacoronavirus genetics, Coronavirus Infections genetics, Genome, Viral genetics, Pandemics, Pneumonia, Viral genetics
- Abstract
In late December 2019, a cluster of cases of pneumonia of unknown etiology were reported linked to a market in Wuhan, China
1 . The causative agent was identified as the species Severe acute respiratory syndrome-related coronavirus and was named SARS-CoV-2 (ref.2 ). By 16 April the virus had spread to 185 different countries, infected over 2,000,000 people and resulted in over 130,000 deaths3 . In the Netherlands, the first case of SARS-CoV-2 was notified on 27 February. The outbreak started with several different introductory events from Italy, Austria, Germany and France followed by local amplification in, and later also outside, the south of the Netherlands. The combination of near to real-time whole-genome sequence analysis and epidemiology resulted in reliable assessments of the extent of SARS-CoV-2 transmission in the community, facilitating early decision-making to control local transmission of SARS-CoV-2 in the Netherlands. We demonstrate how these data were generated and analyzed, and how SARS-CoV-2 whole-genome sequencing, in combination with epidemiological data, was used to inform public health decision-making in the Netherlands.- Published
- 2020
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47. SARS-CoV-2 Transmission from Presymptomatic Meeting Attendee, Germany.
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Hijnen D, Marzano AV, Eyerich K, GeurtsvanKessel C, Giménez-Arnau AM, Joly P, Vestergaard C, Sticherling M, and Schmidt E
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- Adult, Asymptomatic Diseases, Betacoronavirus physiology, COVID-19, COVID-19 Testing, Clinical Laboratory Techniques methods, Congresses as Topic, Coronavirus Infections diagnosis, Germany epidemiology, Humans, Middle Aged, Pandemics, Pneumonia, Viral diagnosis, SARS-CoV-2, Severity of Illness Index, Tomography, X-Ray Computed, Betacoronavirus pathogenicity, Contact Tracing statistics & numerical data, Coronavirus Infections epidemiology, Coronavirus Infections transmission, Disease Outbreaks, Pneumonia, Viral epidemiology, Pneumonia, Viral transmission
- Abstract
During a meeting in Munich, Germany, a presymptomatic attendee with severe acute respiratory syndrome coronavirus 2 infected at least 11 of 13 other participants. Although 5 participants had no or mild symptoms, 6 had typical coronavirus disease, without dyspnea. Our findings suggest hand shaking and face-to-face contact as possible modes of transmission.
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- 2020
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48. First molecular analysis of rabies virus in Qatar and clinical cases imported into Qatar, a case report.
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Oude Munnink BB, Farag EABA, GeurtsvanKessel C, Schapendonk C, van der Linden A, Kohl R, Arron G, Ziglam H, Goravey WGM, Coyle PV, Ibrahim I, Mohran KA, Alrajhi MMS, Islam MM, Abdeen R, Al-Zeyara AAMAH, Younis NM, Al-Romaihi HE, Thani MHJA, Molenkamp R, Sikkema RS, and Koopmans M
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- Adult, Animals, Brain virology, Camelus, Foxes, Genome, Viral, Humans, Male, Qatar, Rabies veterinary, Rabies virus isolation & purification, Rabies virology, Rabies virus genetics
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Identifying the origin of the rabies virus (RABV) infection may have significant implications for control measures. Here, we identified the source of a RABV infection of two Nepalese migrants in Qatar by comparing their RABV genomes with RABV genomes isolated from the brains of a RABV infected camel and fox from Qatar., (Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2020
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49. Multi-laboratory evaluation of ReaScan TBE IgM rapid test, 2016 to 2017.
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Albinsson B, Jääskeläinen AE, Värv K, Jelovšek M, GeurtsvanKessel C, Vene S, Järhult JD, Reusken C, Golovljova I, Avšič-Županc T, Vapalahti O, and Lundkvist Å
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- Antibodies, Viral blood, Encephalitis, Tick-Borne epidemiology, Encephalitis, Tick-Borne immunology, Female, Humans, Immunoenzyme Techniques, Male, Predictive Value of Tests, Sensitivity and Specificity, Encephalitis Viruses, Tick-Borne immunology, Encephalitis, Tick-Borne diagnosis, Immunoglobulin M blood
- Abstract
BackgroundTick-borne encephalitis (TBE) is a potentially severe neurological disease caused by TBE virus (TBEV). In Europe and Asia, TBEV infection has become a growing public health concern and requires fast and specific detection.AimIn this observational study, we evaluated a rapid TBE IgM test, ReaScan TBE, for usage in a clinical laboratory setting.MethodsPatient sera found negative or positive for TBEV by serological and/or molecular methods in diagnostic laboratories of five European countries endemic for TBEV (Estonia, Finland, Slovenia, the Netherlands and Sweden) were used to assess the sensitivity and specificity of the test. The patients' diagnoses were based on other commercial or quality assured in-house assays, i.e. each laboratory's conventional routine methods. For specificity analysis, serum samples from patients with infections known to cause problems in serology were employed. These samples tested positive for e.g. Epstein-Barr virus, cytomegalovirus and Anaplasma phagocytophilum , or for flaviviruses other than TBEV, i.e. dengue, Japanese encephalitis, West Nile and Zika viruses. Samples from individuals vaccinated against flaviviruses other than TBEV were also included. Altogether, 172 serum samples from patients with acute TBE and 306 TBE IgM negative samples were analysed.ResultsCompared with each laboratory's conventional methods, the tested assay had similar sensitivity and specificity (99.4% and 97.7%, respectively). Samples containing potentially interfering antibodies did not cause specificity problems.ConclusionRegarding diagnosis of acute TBEV infections, ReaScan TBE offers rapid and convenient complementary IgM detection. If used as a stand-alone, it can provide preliminary results in a laboratory or point of care setting.
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- 2020
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50. Adherence to hepatitis A travel health guidelines: A cross-sectional seroprevalence study in Dutch travelling families - The Dutch travel Vaccination Study (DiVeST).
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Doornekamp L, GeurtsvanKessel C, Slobbe L, Te Marvelde MR, Scherbeijn SMJ, van Genderen PJJ, van Gorp ECM, and Goeijenbier M
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Background: This Dutch travel Vaccination Study (DiVeST) aimed to study adherence or compliance to Dutch travel health guidelines in travelling families and to identify risk groups to provide better advice and protection for international travellers., Methods: Between 2016 and 2018, family members who travelled to Eastern Europe or outside Europe during the preceding year were recruited via Dutch secondary schools. The vaccination status of the travellers was assessed using questionnaires and vaccination records and hepatitis A virus antibody concentrations in dried blood spot (DBS) eluates. Subgroups of travellers with lower adherence to guidelines were identified., Results: Of the 246 travellers that participated in this study, 155 (63%) travelled to destinations for which the HAV vaccination was recommended. Of these 155 travellers, 56 (36%) said they visited a pre-travel clinic, and 64 of them (41%) showed a valid HAV vaccination in their vaccination records. Of the 145 travellers with available DBS eluates, anti-HAV antibodies were detected in 98 (68%) of them., Conclusions: We found that adherence to travel health guidelines, in terms of HAV vaccination, was suboptimal. According to our results, specific attention should be paid to children, persons visiting friends and relatives and those who travel relatively short distances., Competing Interests: Declaration of competing interest All authors declare no conflicts of interest., (Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2019
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