275 results on '"Ghosh MK"'
Search Results
2. Effect of area specific mineral mixture supplementation on milk production, biochemical and blood mineral status of Black Bengal goats
- Author
-
Kedare, GM, primary, ., Vipin, additional, Karunakaran, M, additional, Mandal, A, additional, Ghosh, MK, additional, and Naskar, S, additional
- Published
- 2021
- Full Text
- View/download PDF
3. Faecal score and dry matter content after feeding synbiotics to neonatal Jersey crossbred calves
- Author
-
Sahu, J, primary, Rai, S, additional, Behera, R, additional, Mandal, S, additional, Jas, R, additional, Ghosh, MK, additional, Mandal, DK, additional, and Chatterjee, A, additional
- Published
- 2020
- Full Text
- View/download PDF
4. Cryptococcal meningitis presented with irreversible binocular blindness in an HIV infected patient- A case report
- Author
-
Bhattacharjee B, M. Ghosh, Raj P, Bhattacharya S, Sudeshna Mallik, Saha B, Sardar B, Naskar A, Majumdar D, and Ghosh Mk
- Subjects
medicine.medical_specialty ,Visual acuity ,genetic structures ,medicine.diagnostic_test ,business.industry ,Opportunistic infection ,Fluid-attenuated inversion recovery ,medicine.disease ,eye diseases ,Ophthalmoscopy ,White matter ,medicine.anatomical_structure ,Plantar reflex ,Ophthalmology ,Amphotericin B deoxycholate ,Decreased Visual Acuity ,medicine ,medicine.symptom ,business ,medicine.diagnostic_sign - Abstract
Cryptococcal meningitis is a major HIV-related opportunistic infection, occurring when CD4 counts are below 100. Ocular involvement is seen with up to 30% of patients with cryptococcal meningitis. A young HIV infected male was admitted to in patient department of School of Tropical Medicine, Calcutta with complaints of headache for two months with dimness of vision for 10 days. Examination showed decreased visual acuity on both eyes, neck rigidity with right sided extensor plantar reflex, external ophthalmoplegia in the form of left 6th cranial nerve palsy, bilaterally absent light reflex, power 5/5 in all four limbs with normal tone and right eye hypermetropic tilted disc, left eye normal on ophthalmoscopy. India Ink preparation of CSF showed encapsulated budding yeast cells. Fungal culture grows Cryptococcus sp. CSF CRAG (cryptococcal antigen measured by immunochromatographic method) was positive in high titre (1:2560). MRI of brain revealed multiple tiny hypo to isointense lesions on T1 and hyperintense lesions on T2, T2 flair sequences are seen in basal ganglia, peri & paraventricular white matter and centrum semi-ovale on both sides. He was managed with injection amphotericin B deoxycholate along with fluconazole as per WHO recommendations and treatment related complications were managed accordingly. Visual acuity was followed in the entire treatment period but vision did not improve, but GCS improved to 15/15, there was no headache, no neck rigidity. Repeat MRI of brain after three weeks of treatment showed absence of above mentioned lesions. After 12 months of follow up the patient had no perception of light in both eyes and no wave in VEP study of both eyes suggestive of permanent visual loss following cryptococcal meningitis. So, cryptococcal meningitis after completion of treatment may have irreversible visual loss.
- Published
- 2018
5. A case of Hashimotos encephalopathy failed to respond to steroids- A case report
- Author
-
Saha B, Sardar B, Chakraborty S, Ghosh Mk, Bhattacharya S, Sudeshna Mallik, Bhattacharjee B, Majumdar D, and Naskar A
- Subjects
Cerebral atrophy ,medicine.medical_specialty ,HBsAg ,biology ,business.industry ,Encephalopathy ,Glutamate receptor ,medicine.disease ,Gastroenterology ,Methylprednisolone ,Internal medicine ,medicine ,biology.protein ,Prednisolone ,NMDA receptor ,Antibody ,business ,medicine.drug - Abstract
A 52-year-old hypothyroid presented with episodes of seizures in last ten days with altered behavior. CT scan of brain showed cerebral atrophy and MRI of brain revealed non-specific changes. In EEG, there was slow wave pattern. CSF study showed increased cell count with all lymphocytes and raised protein with normal glucose. Anti- TPO Antibody was positive. All relevant investigations like HIV, HBsAg, Anti- HCV Ab, ANA (Hep2 method), ANA profile, P-ANCA, c-ANCA, VGKC (voltage gated potassium channel) Ab, NMDA Receptor/Anti- Glutamate Antibody) Ab, VDRL were negative. She was given pulse doses of methylprednisolone followed by maintenance prednisolone. Then her GCS improved followed by sudden deterioration. Repeat CSF showed marginal decrement of protein and cell count. Then she was given IV Immunoglobulin and patient improved. At discharge her CSF study normalized. Anti-TPO Ab titre came to normal level and EEG normalized. Hashimoto’s encephalopathy(HE) should be suspected in a case of sub-acute encephalopathy with high levels of anti-thyroid antibodies may be with normal thyroid functions. Here the patient did not have improvement on steroids. The patient needed immunoglobulin to improve.
- Published
- 2018
6. A Rare Case of Haemophagocytic Syndrome in a HIV Seropositive Patient with Cytomegalovirus Induced Paraparesis
- Author
-
Pal S, Misra Ak, Saha B, Soumyadip Chatterji, Sudeshna Mallik, Naskar A, Shashya S Khaling, Chakraborty S, and Ghosh Mk
- Subjects
Ganciclovir ,Hemophagocytic lymphohistiocytosis ,business.industry ,CMV ,Congenital cytomegalovirus infection ,HIV ,virus diseases ,Jaundice ,medicine.disease ,Pancytopenia ,Virus ,medicine.anatomical_structure ,hemic and lymphatic diseases ,Immunology ,medicine ,Hypoalbuminemia ,Bone marrow ,Hemophagocytic Syndrome ,medicine.symptom ,business ,HLH ,medicine.drug - Abstract
Hemophagocytic syndrome or hemophagocytic lymphohistiocytosis (HLH ) is a rare but potentially life threatening conditioncharacterized by uncontrolled activation of CD8+ T lymphocytes and macrophages that leads to organ damage. HLHcan be primary (familial or genetic) and secondary. Secondary HLH occurs due to infections caused mostly by viruses likeEbstein Barr virus, Cytomegalovirus (CMV), Parvo B19 etc. Early diagnosis and treatment is the key to management ofHLH. We present here a case of a 30 year old female who presented with fever, jaundice, cough and progressive weakness of bothlower limbs. There was no girdle like sensation, no bladder/bowel involvement. She was recently diagnosed to be seropositivefor Human Immuno-deficiency Virus (HIV)-1 and had a CD4 count of 27/μL. She had hepatomegaly, pancytopenia, hyperbilirubinemia, hypoalbuminemia, raised liver enzymes and hypertriglyceridemia. CSF had raised protein, reduced sugarand neutrophils. DNA PCR for CMV was positive and there was evidence of CMV disease on fundoscopy. Her bonemarrow revealed presence of haemophagocytes. She was treated successfully with Ganciclovir, Dexamethasone and antiretroviraldrugs and was discharged. Though often fatal and difficult to diagnose, HLH is potentially treatable disorder.
- Published
- 2017
- Full Text
- View/download PDF
7. Thermal analysis of externally pressurised step bearing including centrifugal inertia effect for a bubbly lubricant
- Author
-
Gautam, SS, Quamar, S, and Ghosh, MK
- Subjects
thermal analysis, step bearing, bubbly lubricant, misalignment, coning, cavitations - Abstract
A numerical study has been done for externally pressurized circular step thrust bearing lubricated with incompressible fluid with finely dispersed air bubbles taking into consideration the variation in lubricant physical properties due to temperature and pressure variation in the fluid film. Effect of misalignment / tilt and coning on cavitations region has also been investigated. The air bubbles are seen to improve the pressure distribution. It also reduces cavitations domain that occurs because of the centrifugal inertia force. Load carrying capacity is seen to improve but both mass flow rate and frictional power consumed decrease. Overall, the presence of air bubble improves the performance of the bearing. It is seen that tilt and coning reduces the cavitations region.
- Published
- 2011
8. Transverse vibration of spinning disk with attached distributed patch and discrete point masses using finite element analysis
- Author
-
Ranjan, V and Ghosh, MK
- Subjects
Free and forced vibration, discrete mass and patch, vibration control - Abstract
Free and forced transverse vibration characteristics of a thin spinning disc attached to a rigid core have been investigated by finite element analysis using ANSYS software. The effect of discrete point masses and patches of distributed masses attached at the periphery of the plate on free and forced vibration behavior of a spinning disc has been investigated. Discrete point masses and distributed patch masses have been placed at higher strain regions to look into its influence on the natural frequencies, mode shapes and response of the plate to external excitation. Results for eight and sixteen point masses and patches on the vibration characteristics have been compared. It has been observed that discrete patches and point masses have significant influence on the modal frequencies and these can also act as dynamic vibration absorbers in reducing vibration of a spinning disc. It has also been shown that discrete patches of piezoelectric patches can also be used to actively control vibration of the spinning disc. Keywords: Free and forced vibration, discrete mass and patch, vibration control.
- Published
- 2010
9. A case of spontaneous pneumothorax, pneumomediastinum & subcutaneous emphysema in Pneumocystis jirovecii pneumonia complicating HIV
- Author
-
Chatterji, S, primary, Pal, D, additional, Ghosh, MK, additional, Naskar, A, additional, Pal, S, additional, Mullick, S, additional, and Bhattacharya, I, additional
- Published
- 2015
- Full Text
- View/download PDF
10. Cutaneous Seeding of Renal Carcinoma by Chiba Needle Aspiration Biopsy
- Author
-
Ghosh Mk, Shenoy Pd, Patil Ud, and Bhushan N. Lakhkar
- Subjects
medicine.medical_specialty ,Kidney ,Radiological and Ultrasound Technology ,medicine.diagnostic_test ,business.industry ,General Medicine ,Malignancy ,medicine.disease ,Needle aspiration biopsy ,030218 nuclear medicine & medical imaging ,Surgery ,03 medical and health sciences ,0302 clinical medicine ,Fine-needle aspiration ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Biopsy ,medicine ,Radiology, Nuclear Medicine and imaging ,Seeding ,Needle Tract Seeding ,Radiology ,Complication ,business - Abstract
Fine needle aspiration biopsy yields a high rate of positive tissue with negligible local sequelae. We report the first instance known to us of Chiba needle tract seeding following this biopsy technique in a patient with renal malignancy.
- Published
- 1991
11. Zero-sum stochastic differential games with reflecting diffusions
- Author
-
Kumar, KS and Ghosh, MK
- Subjects
Mathematics - Abstract
We study zero-sum stochastic differential games in a bounded domain with reflecting boundary condition. We consider two payoff criteria: discounted and average. We establish optimal strategies for both players and characterize these strategies
- Published
- 1997
12. Preparation, characterization and As(V) adsorption behaviour of CNT-ferrihydrite composites
- Author
-
Poinern, Gérrard Eddy Jai, primary, Parsonage, D, additional, Issa, Touma B, additional, Ghosh, MK, additional, Paling, E, additional, and Singh, P, additional
- Published
- 2011
- Full Text
- View/download PDF
13. Distribution of depressive disorders in the elderly
- Author
-
Barua, Ankur, additional, Ghosh, MK, additional, Kar, N, additional, and Basilio, MA, additional
- Published
- 2010
- Full Text
- View/download PDF
14. P02-07. High concentrations of interleukin-15 and low concentrations of CCL5 in breast milk are associated with protection against postnatal HIV transmission
- Author
-
Walter, J, primary, Ghosh, MK, additional, Kuhn, L, additional, Semrau, K, additional, Sinkala, M, additional, Kankasa, C, additional, Thea, DM, additional, and Aldrovandi, GM, additional
- Published
- 2009
- Full Text
- View/download PDF
15. Stability of degenerate diffusions with state-dependent switching
- Author
-
Basak, GK, Bisi, A., Ghosh, MK, Basak, GK, Bisi, A., and Ghosh, MK
- Abstract
This paper deals with the ergodic properties of hybrid systems modelled by diffusion processes with state-dependent switching. We investigate the sufficient conditions expressed in terms of the parameters of the underlying process which would ensure the existence of a unique invariant probability and stability in distribution of the flow. It turns out that the conditions would depend on certain averaging mechanisms over the states of the discrete component of the hybrid system. (C) 1999 Academic Press.
- Published
- 1999
16. Limit theorems for random degenerate diffusions
- Author
-
Basak, GK, Bisi, A., Ghosh, MK, Basak, GK, Bisi, A., and Ghosh, MK
- Published
- 1997
17. Ergodic control of degenerate diffusions
- Author
-
Basak, GK, Borkar, VS, Ghosh, MK, Basak, GK, Borkar, VS, and Ghosh, MK
- Abstract
We study the ergodic control problem of degenerate diffusions on IR(d). Under a certain Liapunov type stability condition we establish the existence of an optimal control. We then study the correponding HJB equation and establish the existence of a unique viscosity solution in a certain class.
- Published
- 1997
18. Stability of a random diffusion with linear drift
- Author
-
Basak, GK, Bisi, A., Ghosh, MK, Basak, GK, Bisi, A., and Ghosh, MK
- Abstract
We consider a Linear system with Markovian switching which is perturbed by Gaussian type noise, If the linear system is mean square stable then we show that under certain conditions the perturbed system is also stable, We also shaw that under certain conditions the linear system with Markovian switching can be stabilized by such noisy perturbation. (C) 1996 Academic Press, Inc.
- Published
- 1996
19. Ergodic control of random singular diffusions
- Author
-
Basak, GK, Bisi, A., Ghosh, MK, Basak, GK, Bisi, A., and Ghosh, MK
- Abstract
We study an ergodic control problem of random singular diffusions. This is a typical hybrid system which arises in numerous applications such as fault tolerant control systems, flexible manufacturing systems etc. Under a certain Liapunov type stability condition we establish the existence of an optimal control. We then study the corresponding HJB equation and establish the existence of a unique viscosity solution in a certain class.
- Published
- 1996
20. AN EPIDEMIOLOGICAL SURVEY OF MALARIA AT AN AIR FORCE STATION
- Author
-
JHA, DIWAKAR, primary, CHITNIS, UKB, additional, and GHOSH, MK, additional
- Published
- 1997
- Full Text
- View/download PDF
21. EPIDEMIOLOGY OF UPPER AERODIGESTIVE CANCERS AMONG ARMED FORCES PERSONNEL AND THEIR FAMILIES
- Author
-
VAIDYA, RAJESH, primary and GHOSH, MK, additional
- Published
- 1995
- Full Text
- View/download PDF
22. NSAIDs and the rate of recovery from arthroscopy: a double-blind randomized study of tiaprofenic acid versus placebo
- Author
-
Varley, GW, primary, Fagg, PS, additional, Ghosh, MK, additional, and Hobbs, NJ, additional
- Published
- 1994
- Full Text
- View/download PDF
23. Elderly patients with hypercholesterolaemia: a double-blind study of the efficacy, safety and tolerability of fluvastatin.
- Author
-
Lye M, Valacio R, Reckless JPD, Ghosh AK, Findlay IN, Ghosh MK, Passmore AP, and Fulcher RA
- Published
- 1998
- Full Text
- View/download PDF
24. Glioma nanotherapy: Unleashing the synergy of dual-loaded DIM and TMZ.
- Author
-
Sarkar S, Kumar S, Saha G, Basu M, and Ghosh MK
- Subjects
- Animals, Humans, Cell Line, Tumor, Apoptosis drug effects, Indoles administration & dosage, Indoles chemistry, Indoles pharmacology, Mice, Nanoparticles chemistry, ErbB Receptors metabolism, ErbB Receptors antagonists & inhibitors, DNA Damage drug effects, Glioma drug therapy, Glioma pathology, Polyglycolic Acid chemistry, Cell Survival drug effects, Lactic Acid chemistry, Dacarbazine analogs & derivatives, Dacarbazine administration & dosage, Dacarbazine chemistry, Dacarbazine pharmacology, Antineoplastic Agents, Alkylating administration & dosage, Antineoplastic Agents, Alkylating pharmacology, Antineoplastic Agents, Alkylating pharmacokinetics, Antineoplastic Combined Chemotherapy Protocols administration & dosage, Antineoplastic Combined Chemotherapy Protocols pharmacology, Mice, Nude, Temozolomide administration & dosage, Temozolomide pharmacology, Polylactic Acid-Polyglycolic Acid Copolymer chemistry, Brain Neoplasms drug therapy, Brain Neoplasms pathology, Drug Synergism, Glioblastoma drug therapy, Glioblastoma pathology
- Abstract
Glioblastoma multiforme (GBM) is a highly aggressive form of primary brain tumor in adults, which unfortunately has an abysmal prognosis and poor survival rates. The reason behind the poor success rate of several FDA-approved drug is mainly attributed to insufficient drug distribution to the tumor site across the blood-brain barrier (BBB) and induction of resistance. In this study, we have developed a novel nanotherapeutic approach to achieve our goal. PLGA-based nanoencapsulation of both Temozolomide (TMZ) and EGFR inhibitor 3,3'-diindoyl methane (DIM) in a combinatorial approach enhances the delivery of them together. Their synergistic mode of actions, significantly enhances the cytotoxic effect of TMZ in vitro and in vivo. Moreover, the dual-loaded nanoformulation works more efficiently on DNA damage and apoptosis, resulting in a several-fold reduction in tumor burden in vivo, systemic drug toxicity, and increased survival. These findings suggest the preclinical potential of this new treatment strategy., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
25. GBM immunotherapy: Exploring molecular and clinical frontiers.
- Author
-
Ghosh MK, Kumar S, Begam S, Ghosh S, and Basu M
- Subjects
- Humans, Cancer Vaccines therapeutic use, Cancer Vaccines immunology, Immune Checkpoint Inhibitors therapeutic use, Animals, Blood-Brain Barrier immunology, Immunotherapy methods, Brain Neoplasms therapy, Brain Neoplasms immunology, Glioblastoma therapy, Glioblastoma immunology, Tumor Microenvironment immunology
- Abstract
GBM is the most common, aggressive, and intracranial primary brain tumor; it originates from the glial progenitor cells, has poor overall survival (OS), and has limited treatment options. In this decade, GBM immunotherapy is in trend and preferred over several conventional therapies, due to their better patient survival outcome. This review explores the clinical trials of several immunotherapeutic approaches (immune checkpoint blockers (ICBs), CAR T-cell therapy, cancer vaccines, and adoptive cell therapy) with their efficacy and safety. Despite significant progress, several challenges (viz., immunosuppressive microenvironment, heterogeneity, and blood-brain barrier (BBB)) were experienced that hamper their immunotherapeutic potential. Furthermore, these challenges were clinically studied to be resolved by multiple combinatorial approaches, discussed in the later part of the review. Thus, this review suggests the clinical use and potential of immunotherapy in GBM and provides the holistic recent knowledge and future perspectives., Competing Interests: Declaration of competing interest All authors declare that there is no competing and conflict of interests., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
26. Antiproliferative Effects of Methanolic Fruit Extract of Solanum xenthocarpum (L.) on Human Breast Cancer Cells.
- Author
-
Yadav PKK, Maurya SK, Swati K, Suvetha SK, Ghosh MK, and Yadav PK
- Abstract
Solanum xanthocarpum, a perennial herb native to India, contains steroidal glycoalkaloids with notable anticancer properties. This study investigated the antioxidant and antiproliferative effects of methanolic fruit extract of S. xanthocarpum on human breast cancer cells (MDA-MB-231). Phytochemical screening and LC-HRMS analysis confirmed presence of various primary and secondary metabolites. Antioxidant activity was assessed through DPPH, ABTS radical scavenging, reducing power, and phosphomolybdate assays. The extract demonstrated significant antioxidant potential with EC50 values of 60.10 ± 0.88 µg/mL (DPPH) and 392.29 ± 3.93 µg/mL (ABTS). Cytotoxicity against MDA-MB-231 cells was evaluated via morphological analysis, MTT assays, and IC50 determination (24.19 ± 0.56 µg/L). Apoptosis was confirmed using dual staining techniques (AO/EB, Hoechst 33342/PI, DAPI), revealing condensed nuclei, apoptotic bodies, and reduced mitochondrial membrane potential, as indicated by Rhodamine staining. Additionally, increased reactive oxygen species (ROS) levels were observed using H2-DCF-DA staining. The total phenolic and flavonoid contents of the extract were 127.78 ± 3.547 mg GAE/g and 98.06 ± 4.289 mg QE/g, respectively. These findings suggest that the methanolic fruit extract of S. xanthocarpum possesses strong antioxidant and anticancer activities, indicating its potential role in cancer treatment. Further studies are warranted to explore its bioactive compounds for developing novel anticancer therapies., (© 2024 Wiley‐VCH GmbH.)
- Published
- 2024
- Full Text
- View/download PDF
27. E3 ubiquitin ligases and deubiquitinases in colorectal cancer: Emerging molecular insights and therapeutic opportunities.
- Author
-
Kumar S, Basu M, and Ghosh MK
- Subjects
- Humans, Wnt Signaling Pathway, NF-kappa B metabolism, Ubiquitination, Animals, Signal Transduction, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology, Colorectal Neoplasms metabolism, Colorectal Neoplasms enzymology, Colorectal Neoplasms therapy, Ubiquitin-Protein Ligases metabolism, Ubiquitin-Protein Ligases genetics, Deubiquitinating Enzymes metabolism
- Abstract
Colorectal cancer (CRC) presents ongoing challenges due to limited treatment effectiveness and a discouraging prognosis, underscoring the need for ground-breaking therapeutic approaches. This review delves into the pivotal role of E3 ubiquitin ligases and deubiquitinases (DUBs), underscoring their role as crucial regulators for tumor suppression and oncogenesis in CRC. We spotlight the diverse impact of E3 ligases and DUBs on CRC's biological processes and their remarkable versatility. We closely examine their specific influence on vital signaling pathways, particularly Wnt/β-catenin and NF-κB. Understanding these regulatory mechanisms is crucial for unravelling the complexities of CRC progression. Importantly, we explore the untapped potential of E3 ligases and DUBs as novel CRC treatment targets, discussing aspects that may guide more effective therapeutic strategies. In conclusion, our concise review illuminates the E3 ubiquitin ligases and deubiquitinases pivotal role in CRC, offering insights to inspire innovative approaches for transforming the treatment landscape in CRC., Competing Interests: Declaration of competing interest There is no competing and conflict of interests., (Copyright © 2024. Published by Elsevier B.V.)
- Published
- 2024
- Full Text
- View/download PDF
28. Molecular monitoring of treatment efficacy in human visceral leishmaniasis.
- Author
-
Roy S, Moulik S, Chaudhuri SJ, Ghosh MK, Goswami RP, Saha B, and Chatterjee M
- Subjects
- Humans, Male, Female, Adult, Treatment Outcome, Child, Middle Aged, Adolescent, Young Adult, Child, Preschool, DNA, Protozoan analysis, Leishmania donovani genetics, Leishmania donovani isolation & purification, Aged, Infant, Leishmaniasis, Visceral drug therapy, Parasite Load, Antiprotozoal Agents therapeutic use, Real-Time Polymerase Chain Reaction
- Abstract
Background: Focused efforts of the visceral leishmaniasis elimination program have led to a drastic decline in cases, and the present challenge is disease monitoring, which this study aimed to assess., Methods: A Leishmania kinetoplastid-targeted qPCR quantified parasite load at disease presentation, and following treatment completion (n=49); an additional 80 cases were monitored after completion of treatment., Results: The parasite load at disease presentation was 13 461.00 (2560.00-37764.00)/µg gDNA, which upon completion of treatment reduced in 47 of 49 cases to 1(1-1)/µg gDNA, p<0.0001. In 80 cases that presented >2 months post-treatment, their parasite burden similarly decreased to 1(1-1)/µg gDNA except in 6 of 80 cases, which were qPCR positive., Conclusion: In 129 cases of visceral leishmaniasis, qPCR by quantification of parasite burden proved effective for monitoring treatment., (© The Author(s) 2024. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene.)
- Published
- 2024
- Full Text
- View/download PDF
29. Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni .
- Author
-
Ghosh MK, Narindoshvili T, Thoden JB, Schumann ME, Holden HM, and Raushel FM
- Subjects
- Animals, Humans, Sorbitol metabolism, Chickens metabolism, Polysaccharides metabolism, Cytidine Diphosphate metabolism, Fructose metabolism, Polysaccharides, Bacterial metabolism, Campylobacter jejuni
- Abstract
Campylobacter jejuni is a Gram-negative pathogenic bacterium commonly found in chickens and is the leading cause of human diarrheal disease worldwide. The various serotypes of C. jejuni produce structurally distinct capsular polysaccharides (CPSs) on the exterior surfaces of the cell wall. The capsular polysaccharide from C. jejuni serotype HS:5 is composed of a repeating sequence of d- glycero -d- manno -heptose and d-glucitol-6-phosphate. We previously defined the pathway for the production of d- glycero -d- manno -heptose in C. jejuni . Here, we elucidate the biosynthetic pathway for the assembly of cytidine diphosphate (CDP)-6-d-glucitol by the combined action of two previously uncharacterized enzymes. The first enzyme catalyzes the formation of CDP-6-d-fructose from cytidine triphosphate (CTP) and d-fructose-6-phosphate. The second enzyme reduces CDP-6-d-fructose with NADPH to generate CDP-6-d-glucitol. Using sequence similarity network (SSN) and genome neighborhood network (GNN) analyses, we predict that these pairs of proteins are responsible for the biosynthesis of CDP-6-d-glucitol and/or CDP-d-mannitol in the lipopolysaccharides (LPSs) and capsular polysaccharides in more than 200 other organisms. In addition, high resolution X-ray structures of the second enzyme are reported, which provide novel insight into the manner in which an open-chain nucleotide-linked sugar is harbored in an active site cleft.
- Published
- 2024
- Full Text
- View/download PDF
30. Monitoring the Long-Term Effectiveness of Miltefosine in Indian Post-Kala-Azar Dermal Leishmaniasis.
- Author
-
Roy S, Moulik S, Roy M, Ghosh MK, Chaudhuri SJ, Pandey DK, Jain S, Dagne DA, and Chatterjee M
- Subjects
- Humans, DNA, Leishmaniasis, Visceral parasitology, Leishmaniasis, Cutaneous parasitology, Leishmania, Leishmania donovani, Phosphorylcholine analogs & derivatives
- Abstract
Post-kala-azar dermal leishmaniasis (PKDL), the dermal sequel to visceral leishmaniasis (VL), is characterized by hypopigmented macules (macular) and/or papules and nodules (polymorphic). Post-kala-azar dermal leishmaniasis plays a significant role in disease transmission, emphasizing the need for monitoring chemotherapeutic effectiveness. Accordingly, this study aimed to quantify the parasite burden in PKDL patients after treatment with miltefosine by a quantitative polymerase chain reaction (qPCR). A Leishmania kinetoplastid gene-targeted qPCR was undertaken using DNA from skin biopsy specimens of patients with PKDL at three time points, i.e., at disease presentation (week 0, n = 157, group 1), upon completion of treatment (week 12, n = 39, group 2), and at any time point 6 months after completion of treatment (week ≥36, n = 54, group 3). A cycle threshold (Ct) <30 was considered the cutoff for positivity, and load was quantified as the number of parasites/µg genomic DNA (gDNA); cure was considered when samples had a Ct >30. The parasite load at disease presentation (group 1) was 10,769 (1,339-80,441)/µg gDNA (median [interquartile range]). In groups 2 and 3, qPCR results were negative in 35/39 cases (89.7%) and 48/54 cases (88.8%), respectively. In the 10/93 (10.8%) qPCR-positive cases, the parasite burdens in groups 2 and 3 were 2,420 (1,205-5,661)/µg gDNA and 22,195 (5,524-100,106)/µg gDNA, respectively. Serial monitoring was undertaken in 45 randomly selected cases that had completed treatment; all cases in groups 2 or 3 had a Ct >30, indicating cure. Overall, qPCR confirmed an 89.2% cure (as 83/93 cases showed parasite clearance), and the persistent qPCR positivity was attributed to nonadherence to treatment or unresponsiveness to miltefosine and remains to be investigated.
- Published
- 2024
- Full Text
- View/download PDF
31. Biosynthesis of UDP-α- N -Acetyl-d - mannosaminuronic Acid and CMP-β- N -Acetyl-d-neuraminic Acid for the Capsular Polysaccharides of Campylobacter jejuni .
- Author
-
Ghosh MK and Raushel FM
- Subjects
- Humans, Polysaccharides, Neuraminic Acids, Sugars, Uridine Diphosphate, Campylobacter jejuni, Cytidine Monophosphate analogs & derivatives, Sialic Acids, Uronic Acids
- Abstract
Campylobacter jejuni is a human pathogen and a leading cause of food poisoning in North America and Europe. The exterior surface of the bacterial cell wall is attached to a polymeric coat of sugar molecules known as the capsular polysaccharide (CPS) that helps protect the organism from the host immune response. The CPS is composed of a repeating sequence of common and unusual sugar residues. In the HS:11 serotype of C. jejuni , we identified two enzymes in the gene cluster for CPS formation that are utilized for the biosynthesis of UDP-α- N -acetyl-d-mannosaminuronic acid (UDP-ManNAcA). In the first step, UDP-α- N -acetyl-d-glucosamine (UDP-GlcNAc) is epimerized at C2 to form UDP-α- N -acetyl-d-mannosamine (UDP-ManNAc). This product is then oxidized by a NAD
+ -dependent C6-dehydrogenase to form UDP-ManNAcA. In the HS:6 serotype ( C. jejuni strain 81116), we identified three enzymes that are required for the biosynthesis of CMP-β- N -acetyl-d-neuraminic acid (CMP-Neu5Ac). In the first step, UDP-GlcNAc is epimerized at C2 and subsequently hydrolyzed to form N -acetyl-d-mannosamine (ManNAc) with the release of UDP. This product is then condensed with PEP by N -acetyl-d-neuraminate synthase to form N -acetyl-d-neuraminic acid (Neu5Ac). In the final step, CMP- N -acetyl-d-neuraminic acid synthase utilizes CTP to convert this product into CMP-Neu5Ac. A bioinformatic analysis of these five enzymes from C. jejuni serotypes HS:11 and HS:6 identified other bacterial species that can produce UDP-ManNAcA or CMP-Neu5Ac for CPS formation.- Published
- 2024
- Full Text
- View/download PDF
32. Status of B-Lymphocyte Subsets and Their Homing Markers in Patients With Post-Kala-Azar Dermal Leishmaniasis.
- Author
-
Sengupta S, Goswami D, Chakraborty B, Chaudhuri SJ, Ghosh MK, and Chatterjee M
- Subjects
- Humans, Skin, Immunoglobulin G, Leishmaniasis, Visceral, B-Lymphocyte Subsets, Leishmaniasis, Cutaneous, Leishmania donovani
- Abstract
In visceral leishmaniasis, the Type II helper T cell predominance results in B cell modulation and enhancement of anti-leishmanial IgG. However, information regarding its dermal sequel, post-kala-azar dermal leishmaniasis (PKDL), remains limited. Accordingly, this study aimed to elucidate the B cell-mediated antibody-dependent/independent immune profiles of PKDL patients. In the peripheral blood of PKDL patients, immunophenotyping of B cell subsets was performed by flow cytometry and by immunohistochemistry at lesional sites. The functionality of B cells was assessed in terms of skin IgG by immunofluorescence, while the circulating levels of B cell chemoattractants (CCL20, CXCL13, CCL17, CCL22, CCL19, CCL27, CXCL9, CXCL10 and CXCL11) were evaluated by a multiplex assay. In patients with PKDL as compared with healthy controls, there was a significant decrease in pan CD19
+ B cells. However, within the CD19+ B cell population, there was a significantly raised proportion of switched memory B cells (CD19+ IgD- CD27+ ) and plasma cells (CD19+ IgD- CD38+ CD27+ ). This was corroborated at lesional sites where a higher expression of CD20+ B cells and CD138+ plasma cells was evident; they were Ki67 negative and demonstrated a raised IgG. The circulating levels of B cell chemoattractants were raised and correlated positively with lesional CD20+ B cells. The increased levels of B cell homing markers possibly accounted for their enhanced presence at the lesional sites. There was a high proportion of plasma cells, which accounted for the increased presence of IgG that possibly facilitated parasite persistence and disease progression., (© 2024 John Wiley & Sons Ltd.)- Published
- 2024
- Full Text
- View/download PDF
33. MGMT in TMZ-based glioma therapy: Multifaceted insights and clinical trial perspectives.
- Author
-
Shaw R, Basu M, Karmakar S, and Ghosh MK
- Subjects
- Humans, Temozolomide therapeutic use, Promoter Regions, Genetic, Signal Transduction, DNA Modification Methylases genetics, Tumor Suppressor Proteins genetics, DNA Repair Enzymes genetics, Epigenesis, Genetic, Glioma drug therapy, Glioma genetics
- Abstract
Temozolomide (TMZ) is the most preferred and approved chemotherapeutic drug for either first- or second-line chemotherapy for glioma patients across the globe. In glioma patients, resistance to treatment with alkylating drugs like TMZ is known to be conferred by exalted levels of MGMT gene expression. On the contrary, epigenetic silencing through MGMT gene promoter methylation leading to subsequent reduction in MGMT transcription and protein expression, is predicted to have a response favoring TMZ treatment. Thus, MGMT protein level in cancer cells is a crucial determining factor in indicating and predicting the choice of alkylating agents in chemotherapy or choosing glioma patients directly for a second line of treatment. Thus, in-depth research is necessary to achieve insights into MGMT gene regulation that has recently enticed a fascinating interest in epigenetic, transcriptional, post-transcriptional, and post-translational levels. Furthermore, MGMT promoter methylation, stability of MGMT protein, and related subsequent adaptive responses are also important contributors to strategic developments in glioma therapy. With applications to its identification as a prognostic biomarker, thus predicting response to advanced glioma therapy, this review aims to concentrate on the mechanistic role and regulation of MGMT gene expression at epigenetic, transcriptional, post-transcriptional, and post-translational levels functioning under the control of multiple signaling dynamics., Competing Interests: Declaration of competing interest There is no competing and conflict of interests., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
34. Chromosomal instability (CIN) triggers immune evasion and metastatic potential in cancer through rewired STING signalling.
- Author
-
Ghosh MK and Roy S
- Subjects
- Humans, Neoplasm Metastasis genetics, Animals, Immune Evasion, Signal Transduction, Neoplasms genetics, Neoplasms immunology, Neoplasms pathology, Neoplasms metabolism, Chromosomal Instability, Membrane Proteins genetics, Membrane Proteins metabolism
- Published
- 2024
- Full Text
- View/download PDF
35. E3 ubiquitin ligases in lung cancer: Emerging insights and therapeutic opportunities.
- Author
-
Basu B, Kal S, Karmakar S, Basu M, and Ghosh MK
- Subjects
- Humans, Proteins, Ubiquitin-Protein Ligases genetics, Ubiquitin-Protein Ligases metabolism, Lung Neoplasms genetics
- Abstract
Aim In this review, we have attempted to provide the readers with an updated account of the role of a family of proteins known as E3 ligases in different aspects of lung cancer progression, along with insights into the deregulation of expression of these proteins during lung cancer. A detailed account of the therapeutic strategies involving E3 ligases that have been developed or currently under development has also been provided in this review. MATERIALS AND METHODS: The review article employs extensive literature search, along with differential gene expression analysis of lung cancer associated E3 ligases using the DESeq2 package in R, and the Gene Expression Profiling Interactive Analysis (GEPIA) database (http://gepia.cancer-pku.cn/). Protein expression analysis of CPTAC lung cancer samples was carried out using the UALCAN webtool (https://ualcan.path.uab.edu/index.html). Assessment of patient overall survival (OS) in response to high and low expression of selected E3 ligases was performed using the online Kaplan-Meier plotter (https://kmplot.com/analysis/index.php?p=background). KEY FINDINGS: SIGNIFICANCE: The review provides an in-depth understanding of the role of E3 ligases in lung cancer progression and an up-to-date account of the different therapeutic strategies targeting oncogenic E3 ligases for improved lung cancer management., Competing Interests: Declaration of competing interest There are no conflicts of interest to declare, and all the authors approved the manuscript., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
36. Biosynthesis of JC-La 2 CoO 4 magnetic nanoparticles explored in catalytic and SMMs properties.
- Author
-
Satpute N, Ghosh MK, Kesharwani A, and Ghorai TK
- Abstract
We have reported the synthesis of JC-La
2 CoO4 magnetic nanoparticles from Jatropha Curcas L. leaf extract in aqueous medium and potential application study in catalytic & Single Molecule Magnets (SMMs). Several techniques were used to investigate the structural, morphological, and elemental composition, particle size, optical properties, catalytic and magnetic properties by XRD, FTIR, SEM, EDAX, XPS, UV-visible and squid magnetic measurement. It was found that the crystallite sizes and grain sizes of JC-La2 CoO4 NPs were 11.3 ± 1 and 24.1 ± 1 nm respectively and surface morphology of the nanoparticles looks spherical shape with good surface area. The band gap of JC-La2 CoO4 was found to be 4.95 eV indicates good semiconductor in nature. XPS studies shows that La and Co present in + 3 and + 2 oxidation state respectively and suggest the composition formula is La2 CoO4 with satisfied all the valency of metal ions. The photocatalytic efficiency of La2 CoO4 shows good result against methylene blue (MB) compared to other dyes like MO, NO, RhB in presence of sunlight with rate constant 56.73 × 10-3 min-1 and completely degraded within 115 mints. The importance of JC-La2 CoO4 has magnetic properties with antiferromagnetic coupling and SMMs properties with nature., (© 2023. The Author(s).)- Published
- 2023
- Full Text
- View/download PDF
37. DDX5 (p68) orchestrates β-catenin, RelA and SP1 mediated MGMT gene expression in human colon cancer cells: Implication in TMZ chemoresistance.
- Author
-
Shaw R, Karmakar S, Basu M, and Ghosh MK
- Subjects
- Humans, Temozolomide pharmacology, Drug Resistance, Neoplasm genetics, Cell Line, Tumor, Alkylating Agents, Gene Expression, DNA Modification Methylases genetics, Tumor Suppressor Proteins genetics, DNA Repair Enzymes genetics, beta Catenin genetics, beta Catenin metabolism, Colonic Neoplasms drug therapy, Colonic Neoplasms genetics
- Abstract
DDX5 (p68) upregulation has been linked with various cancers of different origins, especially Colon Adenocarcinomas. Similarly, across cancers, MGMT has been identified as the major contributor of chemoresistance against DNA alkylating agents like Temozolomide (TMZ). TMZ is an emerging potent chemotherapeutic agent across cancers under the arena of drug repurposing. Recent studies have established that patients with open MGMT promoters are prone to be innately resistant or acquire resistance against TMZ compared to its closed conformation. However, not much is known about the transcriptional regulation of MGMT gene in the context of colon cancer. This necessitates studying MGMT gene regulation which directly impacts the cellular potential to develop chemoresistance against alkylating agents. Our study aims to uncover an unidentified mechanism of DDX5-mediated MGMT gene regulation. Experimentally, we found that both mRNA and protein expression levels of MGMT were elevated in response to p68 overexpression in multiple human colon cancer cell lines and vice-versa. Since p68 cannot directly interact with the MGMT promoter, transcription factors viz., β-catenin, RelA (p65) and SP1 were also studied as reported contributors. Through co-immunoprecipitation and GST-pull-down studies, p68 was established as an interacting partner of SP1 in addition to β-catenin and NF-κB (p50-p65). Mechanistically, luciferase reporter and chromatin-immunoprecipitation assays demonstrated that p68 interacts with the MGMT promoter via TCF4-LEF, RelA and SP1 sites to enhance its transcription. To the best of our knowledge, this is the first report of p68 as a transcriptional co-activator of MGMT promoter and our study identifies p68 as a novel and master regulator of MGMT gene expression., Competing Interests: Declaration of competing interest Authors declared that they do not have any conflict of interest., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
38. Metabolic Pathways for the Biosynthesis of Heptoses Used in the Construction of Capsular Polysaccharides in the Human Pathogen Campylobacter jejuni .
- Author
-
Xiang DF, Xu M, Ghosh MK, and Raushel FM
- Subjects
- Humans, Polysaccharides metabolism, Heptoses, Metabolic Networks and Pathways, Hydro-Lyases metabolism, Phosphates metabolism, Campylobacter jejuni
- Abstract
Campylobacter jejuni is the leading cause of food poisoning in North America. The exterior surface of this bacterium is coated with a capsular polysaccharide (CPS) that consists of a repeating sequence of 2-5 different carbohydrates that is anchored to the outer membrane. Heptoses of various configurations are among the most common monosaccharides that have been identified within the CPS. It is currently thought that all heptose variations derive from the modification of GDP-d- glycero -α-d- manno -heptose (GMH). From the associated gene clusters for CPS biosynthesis, we have identified 20 unique enzymes with different substrate profiles that are used by the various strains and serotypes of C. jejuni to make six different stereoisomers of GDP-6-deoxy-heptose, four stereoisomers of GDP-d- glycero -heptoses, and two stereoisomers of GDP-3,6-dideoxy-heptoses starting from d-sedoheptulose-7-phosphate. The modification enzymes include a C4-dehydrogenase, a C4,6-dehydratase, three C3- and/or C5-epimerases, a C3-dehydratase, eight C4-reductases, two pyranose/furanose mutases, and four enzymes for the formation of GMH from d-sedoheptulose-7-phosphate. We have mixed these enzymes in different combinations to make novel GDP-heptose modifications, including GDP-6-hydroxy-heptoses, GDP-3-deoxy-heptoses, and GDP-3,6-dideoxy-heptoses.
- Published
- 2023
- Full Text
- View/download PDF
39. Fibrosis and bone marrow: understanding causation and pathobiology.
- Author
-
Ghosh K, Shome DK, Kulkarni B, Ghosh MK, and Ghosh K
- Subjects
- Humans, Cytokines metabolism, Fibrosis, Chemokines metabolism, Hormones, Bone Marrow metabolism, Primary Myelofibrosis etiology, Primary Myelofibrosis metabolism, Primary Myelofibrosis pathology
- Abstract
Bone marrow fibrosis represents an important structural change in the marrow that interferes with some of its normal functions. The aetiopathogenesis of fibrosis is not well established except in its primary form. The present review consolidates current understanding of marrow fibrosis. We searched PubMed without time restriction using key words: bone marrow and fibrosis as the main stem against the terms: growth factors, cytokines and chemokines, morphology, megakaryocytes and platelets, myeloproliferative disorders, myelodysplastic syndrome, collagen biosynthesis, mesenchymal stem cells, vitamins and minerals and hormones, and mechanism of tissue fibrosis. Tissue marrow fibrosis-related papers were short listed and analysed for the review. It emerged that bone marrow fibrosis is the outcome of complex interactions between growth factors, cytokines, chemokines and hormones together with their facilitators and inhibitors. Fibrogenesis is initiated by mobilisation of special immunophenotypic subsets of mesenchymal stem cells in the marrow that transform into fibroblasts. Fibrogenic stimuli may arise from neoplastic haemopoietic or non-hematopoietic cells, as well as immune cells involved in infections and inflammatory conditions. Autoimmunity is involved in a small subset of patients with marrow fibrosis. Megakaryocytes and platelets are either directly involved or are important intermediaries in stimulating mesenchymal stem cells. MMPs, TIMPs, TGF-β, PDGRF, and basic FGF and CRCXL4 chemokines are involved in these processes. Genetic and epigenetic changes underlie many of these conditions., (© 2023. BioMed Central Ltd., part of Springer Nature.)
- Published
- 2023
- Full Text
- View/download PDF
40. The E3 ubiquitin ligase CHIP drives monoubiquitylation-mediated nuclear import of the tumor suppressor PTEN.
- Author
-
Chakraborty S, Karmakar S, Basu M, Kal S, and Ghosh MK
- Subjects
- Active Transport, Cell Nucleus, Blotting, Western, Cell Survival, Ubiquitin-Protein Ligases genetics, Karyopherins
- Abstract
Monoubiquitylation is a principal mechanism driving nuclear translocation of the protein PTEN (phosphatase and tensin homolog deleted on chromosome ten). In this study, we describe a novel mechanism wherein the protein CHIP (C-terminus of Hsc70-interacting protein) mediates PTEN monoubiquitylation, leading to its nuclear import. Western blot analysis revealed a rise in both nuclear and total cellular PTEN levels under monoubiquitylation-promoting conditions, an effect that was abrogated by silencing CHIP expression. We established time-point kinetics of CHIP-mediated nuclear translocation of PTEN using immunocytochemistry and identified a role of karyopherin α1 (KPNA1) in facilitating nuclear transport of monoubiquitylated PTEN. We further established a direct interaction between CHIP and PTEN inside the nucleus, with CHIP participating in either polyubiquitylation or monoubiquitylation of nuclear PTEN. Finally, we showed that oxidative stress enhanced CHIP-mediated nuclear import of PTEN, which resulted in increased apoptosis, and decreased cell viability and proliferation, whereas CHIP knockdown counteracted these effects. To the best of our knowledge, this is the first report elucidating non-canonical roles for CHIP on PTEN, which we establish here as a nuclear interacting partner of CHIP., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2023. Published by The Company of Biologists Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
41. Spatio-temporal evaluation of respiratory disease based on the information provided by patients admitted to a medical college hospital in Bangladesh using geographic information system.
- Author
-
Roy C, Ahmed R, Ghosh MK, and Rahman MM
- Abstract
In Bangladesh respiratory illnesses are one of the leading risk factors for death and disability. Limited access to healthcare services, indoor and outdoor air pollution, large-scale use of smoking materials, allergens, and lack of awareness are among the known leading factors contributing to respiratory illness in Bangladesh. Key initiatives taken by the government to handle respiratory illnesses include, changing of respiratory health policy, building awareness, enhancing healthcare facility, and promoting prevention measures. Despite all these efforts, the number of individuals suffering from respiratory diseases has increased steadily during the recent years. This study aims at examining the distribution pattern of respiratory diseases over space and time using Geographic Information System, which is expected to contribute to the better understand of the factors contributing to respiratory illness development. To achieve the aims of the study two interviews were conducted among patients with respiratory sickness in the medicine and respiratory medicine units of Rajshahi Medical College Hospital between January and April of 2019 and 2020 following the guidelines provided by the Ethics Committee, Department of Geography and Environmental Studies, University of Rajshahi, Bangladesh (ethical approval reference number: 2018/08). Principal component extraction and spatial statistical analyses were performed to identify the key respiratory illnesses and their geographical distribution pattern respectively. The results indicate, during January-February the number of patients was a lot higher compared to March-April. The patients were hospitalized mainly due to four respiratory diseases (chronic obstructive pulmonary disease, asthma, pneumonia, and pulmonary hypertension). Geographical distribution pattern of respiratory disease cases also varied considerably between the years as well as months of the years. This information seems reasonable to elucidate the spatio-temporal distribution of respiratory disease and thus improve the existing prevention, control, and cure practices of respiratory illness of the study area. Approach used in this study to elicit spatio-temporal distribution of repertory disease can easily be implemented in other areas with similar geographical settings and patients' illness information from hospital., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)
- Published
- 2023
- Full Text
- View/download PDF
42. COVID-19 therapeutics: Clinical application of repurposed drugs and futuristic strategies for target-based drug discovery.
- Author
-
Kumar S, Basu M, Ghosh P, Pal U, and Ghosh MK
- Abstract
Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes the complicated disease COVID-19. Clinicians are continuously facing huge problems in the treatment of patients, as COVID-19-specific drugs are not available, hence the principle of drug repurposing serves as a one-and-only hope. Globally, the repurposing of many drugs is underway; few of them are already approved by the regulatory bodies for their clinical use and most of them are in different phases of clinical trials. Here in this review, our main aim is to discuss in detail the up-to-date information on the target-based pharmacological classification of repurposed drugs, the potential mechanism of actions, and the current clinical trial status of various drugs which are under repurposing since early 2020. At last, we briefly proposed the probable pharmacological and therapeutic drug targets that may be preferred as a futuristic drug discovery approach in the development of effective medicines., (© 2023 The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
43. A small HDM2 antagonist peptide and a USP7 inhibitor synergistically inhibit the p53-HDM2-USP7 circuit.
- Author
-
Mukherjee S, Saha G, Roy NS, Naiya G, Ghosh MK, and Roy S
- Subjects
- Ubiquitin-Specific Peptidase 7 metabolism, Peptides pharmacology, Peptides metabolism, Proto-Oncogene Proteins c-mdm2, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Protein p53 metabolism
- Abstract
HDM2, an E3 ubiquitin ligase, is a crucial regulator of many proliferation-related pathways. It is also one of the primary regulators of p53. USP7, a deubiquitinase, also plays a key role in the regulation of both p53 and HDM2, thus forming a small regulatory network with them. This network has emerged as an important drug target. Development of a synergistic combination targeting both proteins is desirable and important for regulating this module. We have developed a small helically constrained peptide that potently inhibited p53-HDM2 interaction and exerted anti-proliferative effects on p53
+/+ cells. A combination of this peptide-when attached to cell entry and nuclear localization tags-and a USP7 inhibitor showed synergistic anti-proliferative effects against cells harboring wild-type alleles of p53. Synergistic inhibition of two important drug targets may lead to novel therapeutic strategies., (© 2023 John Wiley & Sons Ltd.)- Published
- 2023
- Full Text
- View/download PDF
44. The DEAD-box RNA helicase DDX5 (p68) and β-catenin: The crucial regulators of FOXM1 gene expression in arbitrating colorectal cancer.
- Author
-
Tabassum S, Basu M, and Ghosh MK
- Subjects
- Humans, Carcinogenesis genetics, Cell Line, Tumor, Gene Expression, Negotiating, Transcription Factors genetics, beta Catenin genetics, beta Catenin metabolism, Colonic Neoplasms genetics, Colonic Neoplasms metabolism, DEAD-box RNA Helicases genetics, DEAD-box RNA Helicases metabolism, Forkhead Box Protein M1 genetics
- Abstract
Forkhead box M1 (FOXM1), a vital member of the Forkhead box family of transcription factors, helps in mediating oncogenesis. However, limited knowledge exists regarding the mechanistic insights into the FOXM1 gene regulation. DDX5 (p68), an archetypal member of the DEAD-box family of RNA helicases, shows multifaceted action in cancer progression by arbitrating RNA metabolism and transcriptionally coactivating transcription factors. Here, we report a novel mechanism of alliance between DDX5 (p68) and the Wnt/β-catenin pathway in regulating FOXM1 gene expression and driving colon carcinogenesis. Initial bioinformatic analyses highlighted elevated expression levels of FOXM1 and DDX5 (p68) in colorectal cancer datasets. Immunohistochemical assays confirmed that FOXM1 showed a positive correlation with DDX5 (p68) and β-catenin in both normal and colon carcinoma patient samples. Overexpression of DDX5 (p68) and β-catenin increased the protein and mRNA expression profiles of FOXM1, and the converse correlation occurred during downregulation. Mechanistically, overexpression and knockdown of DDX5 (p68) and β-catenin elevated and diminished FOXM1 promoter activity respectively. Additionally, Chromatin immunoprecipitation assay demonstrated the occupancy of DDX5 (p68) and β-catenin at the TCF4/LEF binding element (TBE) sites on the FOXM1 promoter. Thiostrepton delineated the effect of FOXM1 inhibition on cell proliferation and migration. Colony formation assay, migration assay, and cell cycle data reveal the importance of the DDX5 (p68)/β-catenin/FOXM1 axis in oncogenesis. Collectively, our study mechanistically highlights the regulation of FOXM1 gene expression by DDX5 (p68) and β-catenin in colorectal cancer., Competing Interests: Declaration of competing interest The authors declare that they have no competing interests., (Copyright © 2023. Published by Elsevier B.V.)
- Published
- 2023
- Full Text
- View/download PDF
45. USP7 - a crucial regulator of cancer hallmarks.
- Author
-
Saha G, Roy S, Basu M, and Ghosh MK
- Subjects
- Humans, Apoptosis, Signal Transduction, Ubiquitin-Specific Peptidase 7 genetics, Neoplasms drug therapy, Neoplasms genetics
- Abstract
Over the course of three decades of study, the deubiquitinase Herpesvirus associated Ubiquitin-Specific Protease/Ubiquitin-Specific Protease 7 (HAUSP/USP7) has gradually come to be recognized as a crucially important molecule in cellular physiology. The fact that USP7 is overexpressed in a number of cancers, including breast, prostate, colorectal, and lung cancers, supports the idea that USP7 is also an important regulator of tumorigenesis. In this review, we discuss USP7's function in relation to the cancer hallmarks described by Hanahan and Weinberg. This post-translational modifier can support increased proliferation, block unfavorable growth signals, stop cell death, and support an unstable cellular genome by manipulating key players in the pertinent signalling circuit. It is interesting to note that USP7 also aids in the stabilization of molecules that support angiogenesis and metastasis. Targeting USP7 has now emerged as a crucial component of USP7 research because pharmacological inhibition of USP7 supports p53-mediated cell cycle arrest and apoptosis. Efficacious USP7 inhibition is currently being investigated in both synthetic and natural compounds, but issues with selectivity and a lack of co-crystal structure have hindered USP7 inhibition from being tested in clinical settings. Moreover, the development of new, more effective USP7 inhibitors and their encouraging implications by numerous groups give us a glimmer of hope for USP7-targeting medications as effective substitutes for hazardous cancer chemotherapeutics., Competing Interests: Declaration of Competing Interest The authors declare that they have no competing interests., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
46. Neurological damages in COVID-19 patients: Mechanisms and preventive interventions.
- Author
-
Sarkar S, Karmakar S, Basu M, Ghosh P, and Ghosh MK
- Abstract
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a novel coronavirus, causes coronavirus disease 2019 (COVID-19) which led to neurological damage and increased mortality worldwide in its second and third waves. It is associated with systemic inflammation, myocardial infarction, neurological illness including ischemic strokes (e.g., cardiac and cerebral ischemia), and even death through multi-organ failure. At the early stage, the virus infects the lung epithelial cells and is slowly transmitted to the other organs including the gastrointestinal tract, blood vessels, kidneys, heart, and brain. The neurological effect of the virus is mainly due to hypoxia-driven reactive oxygen species (ROS) and generated cytokine storm. Internalization of SARS-CoV-2 triggers ROS production and modulation of the immunological cascade which ultimately initiates the hypercoagulable state and vascular thrombosis. Suppression of immunological machinery and inhibition of ROS play an important role in neurological disturbances. So, COVID-19 associated damage to the central nervous system, patients need special care to prevent multi-organ failure at later stages of disease progression. Here in this review, we are selectively discussing these issues and possible antioxidant-based prevention therapies for COVID-19-associated neurological damage that leads to multi-organ failure., Competing Interests: The authors declare no conflict of interest., (© 2023 The Authors. MedComm published by Sichuan International Medical Exchange & Promotion Association (SCIMEA) and John Wiley & Sons Australia, Ltd.)
- Published
- 2023
- Full Text
- View/download PDF
47. Biosynthesis of 3,6-Dideoxy-heptoses for the Capsular Polysaccharides of Campylobacter jejuni .
- Author
-
Ghosh MK, Xiang DF, and Raushel FM
- Subjects
- Polysaccharides, Oxidoreductases chemistry, Multigene Family, Campylobacter jejuni
- Abstract
Campylobacter jejuni is the leading cause of food poisoning in the United States. Surrounding the exterior surface of this bacterium is a capsular polysaccharide (CPS) that helps protect the organism from the host immune system. The CPS is composed of a repeating sequence of common and unusual sugar residues, including relatively rare heptoses. In the HS:5 serotype, we identified four enzymes required for the biosynthesis of GDP-3,6-dideoxy-β-l- ribo -heptose. In the first step, GDP-d- glycero -α-d- manno -heptose is dehydrated to form GDP-6-deoxy-4-keto-α-d- lyxo -heptose. This product is then dehydrated by a pyridoxal phosphate-dependent C3-dehydratase to form GDP-3,6-dideoxy-4-keto-α-d- threo -heptose before being epimerized at C5 to generate GDP-3,6-dideoxy-4-keto-β-l- erythro -heptose. In the final step, a C4-reductase uses NADPH to convert this product to GDP-3,6-dideoxy-β-l- ribo -heptose. These results are at variance with the previous report of 3,6-dideoxy-d- ribo -heptose in the CPS from serotype HS:5 of C. jejuni . We also demonstrated that GDP-3,6-dideoxy-β-l- xylo -heptose is formed using the corresponding enzymes found in the gene cluster from serotype HS:11 of C. jejuni . The utilization of different C4-reductases from other serotypes of C. jejuni enabled the formation of GDP-3,6-dideoxy-α-d- arabino -heptose and GDP-3,6-dideoxy-α-d- lyxo -heptose.
- Published
- 2023
- Full Text
- View/download PDF
48. USP7 imparts partial EMT state in colorectal cancer by stabilizing the RNA helicase DDX3X and augmenting Wnt/β-catenin signaling.
- Author
-
Basu B, Karmakar S, Basu M, and Ghosh MK
- Subjects
- Humans, Cell Line, Tumor, DEAD-box RNA Helicases genetics, Epithelial-Mesenchymal Transition genetics, Ubiquitin-Specific Peptidase 7 genetics, Wnt Signaling Pathway, beta Catenin, Colonic Neoplasms genetics
- Abstract
Epithelial mesenchymal transition (EMT) is a fundamental and highly regulated process that is normally observed during embryonic development and tissue repair but is deregulated during advanced cancer. Classically, through the process of EMT, cancer cells gradually transition from a predominantly epithelial phenotype to a more invasive mesenchymal phenotype. Increasing studies have, however, brought into light the existence of unique intermediary states in EMT, often referred to as partial EMT states. Through our studies we have found the deubiquitinase USP7 to be strongly associated with the development of such a partial EMT state in colon cancer cells, characterized by the acquisition of mesenchymal characteristics but without the reduction in epithelial markers. We found USP7 to be overexpressed in colon adenocarcinomas and to be closely associated with advancing tumor stage. We found that functional inhibition or knockdown of USP7 is associated with a marked reduction in mesenchymal markers and in overall migration potential of cancer cells. Starting off with a proteomics-based approach we were able to identify and later on verify the DEAD box RNA helicase DDX3X to be an interacting partner of USP7. We then went on to show that USP7, through the stabilization of DDX3X, augments Wnt/β-catenin signaling, which has previously been shown to be greatly associated with colorectal cancer cell invasiveness. Our results indicate USP7 as a novel key player in establishing a partial mesenchymal phenotype in colorectal cancer., Competing Interests: Declaration of competing interest There is no conflict of interest to declare, and all the authors approved the manuscript., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
49. Assessment of superiority of HSP70-targeting aptamer-functionalized drug-nanocarrier over non-targeted commercially available counterpart in HCC therapy: in vitro and in vivo investigations and molecular modeling.
- Author
-
Chakraborty S, Chakraborty A, Mukherjee B, Besra SE, Dewanjee S, Mukherjee A, Sen R, Ojha PK, Kumar V, Shaw TK, Ghosh P, Debnath MC, and Ghosh MK
- Subjects
- Humans, Molecular Docking Simulation, Paclitaxel pharmacology, Drug Delivery Systems methods, Cell Line, Tumor, Carcinoma, Hepatocellular drug therapy, Liver Neoplasms drug therapy, Nanoparticles
- Abstract
Aims: This research aims to compare the therapeutic potential of target-specific phosphorothioate backbone-modified aptamer L5 (TLS9a)-functionalized paclitaxel (PTX)-loaded nanocarrier (PTX-NPL5) that we formulated with that of non-targeted commercial formulation, protein albumin-bound nanoparticles of PTX, Abraxane® (CF) against hepatocellular carcinoma (HCC) through a myriad of preclinical investigations., Main Methods: A variety of in vitro and in vivo assays have been executed to compare the therapeutic effects of the formulations under investigation, including the investigation of the degree of apoptosis induction and its mechanism, cell cycle analysis, the level of ROS production, and redox status, the morphological and histological characteristics of malignant livers, and in vivo imaging. The formulations were also compared concerning pharmacokinetic behaviors. Finally, in silico molecular docking has been performed to predict the possible interactions between aptamer and target(s)., Key Findings: PTX-NPL5 exhibited therapeutic superiority over CF in terms of inducing apoptosis, cell cycle arrest, endorsing oxidative stress to neoplastic cells, and reducing hepatic cancerous lesions. Unlike CF, PTX-NPL5 did not exhibit any significant toxicity in healthy hepatocytes, proving enough impetus regarding the distinctive superiority of PTX-NPL5 over CF. The pharmacokinetic analysis further supported superior penetration and retention of PTX-NPL5 in neoplastic hepatocytes compared to CF. A molecular modeling study proposed possible interaction between aptamer L5 and heat shock protein 70 (HSP70)., Significance: The target-specificity of PTX-NPL5 towards neoplastic hepatocytes, probably achieved through HSP70 recognition, enhanced its therapeutic efficacy over CF, which may facilitate its real clinical deployment against HCC in the near future., Competing Interests: Declaration of competing interest Authors of the study wish to express that they do not have any financial or commercial conflict of interest concerning the manuscript., (Copyright © 2023 Elsevier Inc. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
50. High-Accuracy Heats of Formation for Alkane Oxidation: From Small to Large via the Automated CBH-ANL Method.
- Author
-
Elliott SN, Keçeli M, Ghosh MK, Somers KP, Curran HJ, and Klippenstein SJ
- Abstract
It is generally challenging to obtain high-accuracy predictions for the heat of formation for species with more than a handful of heavy atoms, such as those of importance in standard combustion mechanisms. To this end, we construct the CBH-ANL approach and illustrate that, for a set of 194 alkane oxidation species, it can be used to produce Δ H
f (0 K) values with 2σ uncertainties of 0.2-0.5 kcal mol-1 . This set includes the alkanes, hydroperoxides, and alkyl, peroxy, and hydroperoxyalkyl radicals for 17 representative hydrocarbon fuels containing up to 10 heavy atoms with various degrees of branching in the alkane backbone. The CBH-ANL approach, automated in the QTC and AutoMech software suites, builds balanced chemical equations for the calculation of Δ Hf (0 K), in which the reference species may be up to five heavy atoms. The high-level ANL0 and ANL1 reference Δ Hf (0 K) values are further refined for even the largest of these reference species with a novel laddering approach. We perform a comprehensive quantification of the uncertainties for both the individual reference species (the largest of which is 0.15 kcal mol-1 ) and the propagation of those uncertainties when used in the calculation of Δ Hf (0 K) for the 194 target species. We examine the sensitivity of the predicted Δ Hf (0 K) values to (i) electronic energies from various methods, including ωB97X-D/cc-pVTZ, B2PLYP-D3/cc-pVTZ, CCSD(T)-F12b/cc-pVDZ-F12//B2PLYP-D3/cc-pVTZ, and CCSD(T)-F12b/cc-pVTZ-F12//B2PLYP-D3/cc-pVTZ; (ii) the zero-point vibrational energies (ZPVEs), where we consider harmonic ZPVEs as well as two scaling-based estimates of the anharmonic ZPVEs, all implemented for both ωB97X-D/cc-pVTZ and B2PLYP-D3/cc-pVTZ calculations; (iii) the particular CBH-ANL scheme employed; and (iv) the procedure for choosing the reference conformer for the analyses. The discussion concludes with a summary of the estimated overall uncertainty in the predictions and a validation of the predictions for the alkane subset.- Published
- 2023
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.