38 results on '"Grzegorz Czerwonka"'
Search Results
2. Synthesis, Characterization and Biological Investigations of Half-Sandwich Ruthenium(II) Complexes Containing Benzimidazole Moiety
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Patrycja Rogala, Agnieszka Jabłońska-Wawrzycka, Grzegorz Czerwonka, Katarzyna Kazimierczuk, Katarzyna Gałczyńska, Sławomir Michałkiewicz, Justyna Kalinowska-Tłuścik, Marta Karpiel, and Karel D. Klika
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ruthenium complexes ,structural and spectroscopic studies ,electrochemistry ,X-ray diffraction ,antibacterial and antibiofilm activity ,molecular docking studies ,Organic chemistry ,QD241-441 - Abstract
Half-sandwich Ru(II) complexes belong to group of biologically active metallo-compounds with promising antimicrobial and anticancer activity. Herein, we report the synthesis and characterization of arene ruthenium complexes containing benzimidazole moiety, namely, [(η6-p-cymene)RuCl(bimCOO)] (1) and [(η6-p-cymene)RuCl2(bim)] (2) (where bimCOO = benzimidazole-2-carboxylate and bim = 1-H-benzimidazole). The compounds were characterized by 1H NMR, 13C NMR, IR, UV–vis and CV. Molecular structures of the complexes were determined by SC-XRD analysis, and the results indicated the presence of a pseudo-tetrahedral (piano stool) geometry. Interactions in the crystals of the Ru complexes using the Hirshfeld surface analysis were also examined. In addition, the biological studies of the complexes, such as antimicrobial assays (against planktonic and adherent microbes), cytotoxicity and lipophilicity, were performed. Antibacterial activity of the complexes was evaluated against S. aureus, E. coli, P. aeruginosa PAO1 and LES B58. Cytotoxic activity was tested against primary human fibroblasts and adenocarcinoma human alveolar basal epithelial cells. Obtained biological results show that the ruthenium compounds have bacteriostatic activity toward Pseudomonas aeruginosa PAO1 strain and are not toxic to normal cells. A molecular docking study was applied as a predictive source of information about the plausibility of examined structures binding with HSA as a transporting system.
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- 2022
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3. Draft Genome of Proteus mirabilis Serogroup O18 Elaborating Phosphocholine-Decorated O Antigen
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Grzegorz Czerwonka, Dawid Gmiter, and Katarzyna Durlik-Popińska
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Proteus mirabilis ,phosphocholine ,lipopolysaccharide ,urinary tract infection ,genome ,Microbiology ,QR1-502 - Abstract
Proteus mirabilis is a pathogenic, Gram-negative, rod-shaped bacterium that causes ascending urinary tract infections. Swarming motility, urease production, biofilm formation, and the properties of its lipopolysaccharide (LPS) are all factors that contribute to the virulence of this bacterium. Uniquely, members of the O18 serogroup elaborate LPS molecules capped with O antigen polymers built of pentasaccharide repeats; these repeats are modified with a phosphocholine (ChoP) moiety attached to the proximal sugar of each O unit. Decoration of the LPS with ChoP is an important surface modification of many pathogenic and commensal bacteria. The presence of ChoP on the bacterial envelope is correlated with pathogenicity, as decoration with ChoP plays a role in bacterial adhesion to mucosal surfaces, resistance to antimicrobial peptides and sensitivity to complement-mediated killing in several species. The genome of P. mirabilis O18 is 3.98 Mb in size, containing 3,762 protein-coding sequences and an overall GC content of 38.7%. Annotation performed using the RAST Annotation Server revealed genes associated with choline phosphorylation, uptake and transfer. Moreover, amino acid sequence alignment of the translated licC gene revealed it to be homologous to LicC from Streptococcus pneumoniae encoding CTP:phosphocholine cytidylyltransferase. Recognized homologs are located in the O antigen gene clusters of Proteus species, near the wzx gene encoding the O antigen flippase, which translocates lipid-linked O units across the inner membrane. This study reveals the genes potentially engaged in LPS decoration with ChoP in P. mirabilis O18.
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- 2021
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4. Ruthenium(IV) Complexes as Potential Inhibitors of Bacterial Biofilm Formation
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Agnieszka Jabłońska-Wawrzycka, Patrycja Rogala, Grzegorz Czerwonka, Sławomir Michałkiewicz, Maciej Hodorowicz, and Paweł Kowalczyk
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ruthenium ,structural and spectroscopic studies ,electrochemistry ,X-ray diffraction ,antibacterial and antibiofilm activity ,Organic chemistry ,QD241-441 - Abstract
With increasing antimicrobial resistance there is an urgent need for new strategies to control harmful biofilms. In this study, we have investigated the possibility of utilizing ruthenium(IV) complexes (H3O)2(HL1)2[RuCl6]·2Cl·2EtOH (1) and [RuCl4(CH3CN)2](L32)·H2O (2) (where L1-2-hydroxymethylbenzimadazole, L32-1,4-dihydroquinoxaline-2,3-dione) as effective inhibitors for biofilms formation. The biological activities of the compounds were explored using E. coli, S. aureus, P. aeruginosa PAO1, and P. aeruginosa LES B58. The new chloride ruthenium complexes were characterized by single-crystal X-ray diffraction analysis, Hirshfeld surface analysis, FT-IR, UV-Vis, magnetic and electrochemical (CV, DPV) measurements, and solution conductivity. In the obtained complexes, the ruthenium(IV) ions possess an octahedral environment. The intermolecular classical and rare weak hydrogen bonds, and π···π stacking interactions significantly contribute to structure stabilization, leading to the formation of a supramolecular assembly. The microbiological tests have shown complex 1 exhibited a slightly higher anti-biofilm activity than that of compound 2. Interestingly, electrochemical studies have allowed us to determine the relationship between the oxidizing properties of complexes and their biological activity. Probably the mechanism of action of 1 and 2 is associated with generating a cellular response similar to oxidative stress in bacterial cells.
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- 2020
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5. TYPE VB AND VI SECRETION SYSTEMS AS COMPETITION AGENTS OF GRAM-NEGATIVE BACTERIA
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Dawid Gmiter, Grzegorz Czerwonka, and Wiesław Kaca
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contact-dependent growth inhibition ,bacterial competition ,type Vb secretion system ,type VI secretion system ,Microbiology ,QR1-502 - Published
- 2018
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6. Characterization of Microbial Communities in Acidified, Sulfur Containing Soils
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Grzegorz Czerwonka, Iwona Konieczna, Paulina Żarnowiec, Artur Zieliński, Agnieszka Malinowska-Gniewosz, Agnieszka Gałuszka, Zdzisław Migaszewski, and Wiesław Kaca
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acidified soil microflora ,DNA isolation specific method ,soil bacteria ,soil biochemical activity ,Genetics ,QH426-470 ,Microbiology ,QR1-502 - Abstract
Over a period of three years, microbial communities in acidified soil with high sulfur content were analyzed. In soil water extracts ureolytic, proteolytic, oxidoreductive, and lipolytic activity were detected. The presented results indicate that the enzymatic activity of soil microbial communities varied considerably over time. Isolated 26 (80%) bacterial strains belonged to genus Bacillus sp. and were identified bycultivation and 16S rRNA methods. The commercially available procedures for bacterial DNA isolation from acidified soil failed, therefore a new, specific DNA isolation method was established. Ureolytic activity, detected in soil extracts as well as in isolated Bacillus sp. strains may be considered as a tool for the bioremediation of acidified soils with high sulfate content.
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- 2017
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7. Genomes comparison of two Proteus mirabilis clones showing varied swarming ability
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Dawid Gmiter, Ilona Pacak, Sylwia Nawrot, Grzegorz Czerwonka, and Wieslaw Kaca
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Genetics ,General Medicine ,Molecular Biology - Abstract
Background Proteus mirabilis is a Gram-negative bacteria most noted for its involvement with catheter-associated urinary tract infections. It is also known for its multicellular migration over solid surfaces, referred to as ‘swarming motility’. Here we analyzed the genomic sequences of two P. mirabilis isolates, designated K38 and K39, which exhibit varied swarming ability. Methods and results The isolates genomes were sequenced using Illumina NextSeq sequencer, resulting in about 3.94 Mbp, with a GC content of 38.6%, genomes. Genomes were subjected for in silico comparative investigation. We revealed that, despite a difference in swarming motility, the isolates showed high genomic relatedness (up to 100% ANI similarity), suggesting that one of the isolates probably originated from the other. Conclusions The genomic sequences will allow us to investigate the mechanism driving this intriguing phenotypic heterogeneity between closely related P. mirabilis isolates. Phenotypic heterogeneity is an adaptive strategy of bacterial cells to several environmental pressures. It is also an important factor related to their pathogenesis. Therefore, the availability of these genomic sequences will facilitate studies that focus on the host–pathogen interactions during catheter-associated urinary tract infections.
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- 2023
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8. Synthesis, characterization and biological investigations of half-sandwich ruthenium(II) complexes containing benzimidazole moiety
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Patrycja Rogala, Agnieszka Jabłońska-Wawrzycka, Grzegorz Czerwonka, Katarzyna Kazimierczuk, Katarzyna Gałczyńska, Sławomir Michałkiewicz, Justyna Kalinowska-Tłuścik, Marta Karpiel, and Karel D. Klika
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Chemistry (miscellaneous) ,Organic Chemistry ,Drug Discovery ,Molecular Medicine ,Pharmaceutical Science ,ruthenium complexes ,structural and spectroscopic studies ,electrochemistry ,X-ray diffraction ,antibacterial and antibiofilm activity ,molecular docking studies ,Physical and Theoretical Chemistry ,Analytical Chemistry - Abstract
Half-sandwich Ru(II) complexes belong to group of biologically active metallo-compounds with promising antimicrobial and anticancer activity. Herein, we report the synthesis and characterization of arene ruthenium complexes containing benzimidazole moiety, namely, [(η6-p-cymene)RuCl(bimCOO)] (1) and [(η6-p-cymene)RuCl2(bim)] (2) (where bimCOO = benzimidazole-2-carboxylate and bim = 1-H-benzimidazole). The compounds were characterized by 1H NMR, 13C NMR, IR, UV–vis and CV. Molecular structures of the complexes were determined by SC-XRD analysis, and the results indicated the presence of a pseudo-tetrahedral (piano stool) geometry. Interactions in the crystals of the Ru complexes using the Hirshfeld surface analysis were also examined. In addition, the biological studies of the complexes, such as antimicrobial assays (against planktonic and adherent microbes), cytotoxicity and lipophilicity, were performed. Antibacterial activity of the complexes was evaluated against S. aureus, E. coli, P. aeruginosa PAO1 and LES B58. Cytotoxic activity was tested against primary human fibroblasts and adenocarcinoma human alveolar basal epithelial cells. Obtained biological results show that the ruthenium compounds have bacteriostatic activity toward Pseudomonas aeruginosa PAO1 strain and are not toxic to normal cells. A molecular docking study was applied as a predictive source of information about the plausibility of examined structures binding with HSA as a transporting system.
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- 2023
9. Phosphocholine decoration of
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Grzegorz, Czerwonka, Katarzyna, Durlik-Popińska, Marcin, Drabik, Martyna, Szczerba, Maria, Kwiatkowska, and Wiesław, Kaca
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- 2022
10. Duszpasterskie towarzyszenie małżonkom w odpowiedzialnym rodzicielstwie
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Grzegorz Czerwonka
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Ocean Engineering - Abstract
Duszpasterskie towarzyszenie małżonkom w odpowiedzialnym rodzicielstwie należy do istotnych zadań tej zbawczej działalności Kościoła. Małżonkowie zaproszeni przez Boga do realizacji powołania rodzicielskiego oczekują na wsparcie płynące ze strony duszpasterzy. Wsparcie to jest realizowane przez kapłanów poprzez przepowiadanie słowa Bożego, parafialne poradnictwo rodzinne, posługę kierownictwa duchowego i wsparcia modlitewnego czy też w procesie pedagogizacji. Przeprowadzone wśród prezbiterów badania dowiodły, że wysoki odsetek księży deklaruje gotowość duszpasterskiego towarzyszenia małżonkom w dziele odpowiedzialnego rodzicielstwa. Częściej tak uważają zwłaszcza kapłani starsi, powyżej 36. roku życia, mający większe doświadczenie posługiwania dla małżeństw. Wyzwanie wsparcia duszpasterskiego małżonków w odpowiedzialnym rodzicielstwie stanowią kapłani młodsi, do 35 roku życia.
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- 2020
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11. Bacterial Motility and Its Role in Skin and Wound Infections
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Katarzyna Zegadło, Monika Gieroń, Paulina Żarnowiec, Katarzyna Durlik-Popińska, Beata Kręcisz, Wiesław Kaca, and Grzegorz Czerwonka
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Inorganic Chemistry ,Organic Chemistry ,General Medicine ,Physical and Theoretical Chemistry ,Molecular Biology ,Spectroscopy ,Catalysis ,Computer Science Applications - Abstract
Skin and wound infections are serious medical problems, and the diversity of bacteria makes such infections difficult to treat. Bacteria possess many virulence factors, among which motility plays a key role in skin infections. This feature allows for movement over the skin surface and relocation into the wound. The aim of this paper is to review the type of bacterial movement and to indicate the underlying mechanisms than can serve as a target for developing or modifying antibacterial therapies applied in wound infection treatment. Five types of bacterial movement are distinguished: appendage-dependent (swimming, swarming, and twitching) and appendage-independent (gliding and sliding). All of them allow bacteria to relocate and aid bacteria during infection. Swimming motility allows bacteria to spread from ‘persister cells’ in biofilm microcolonies and colonise other tissues. Twitching motility enables bacteria to press through the tissues during infection, whereas sliding motility allows cocci (defined as non-motile) to migrate over surfaces. Bacteria during swarming display greater resistance to antimicrobials. Molecular motors generating the focal adhesion complexes in the bacterial cell leaflet generate a ‘wave’, which pushes bacterial cells lacking appendages, thereby enabling movement. Here, we present the five main types of bacterial motility, their molecular mechanisms, and examples of bacteria that utilise them. Bacterial migration mechanisms can be considered not only as a virulence factor but also as a target for antibacterial therapy.
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- 2023
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12. Ruthenium Complexes with 2-Pyridin-2-yl-1H-benzimidazole as Potential Antimicrobial Agents: Correlation between Chemical Properties and Anti-Biofilm Effects
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Patrycja Rogala, Marcin Drabik, Agnieszka Jabłońska-Wawrzycka, Grzegorz Czerwonka, Katarzyna Gałczyńska, and Magdalena Dańczuk
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Pyridines ,Drug Evaluation, Preclinical ,Electrochemistry ,Ligands ,chemistry.chemical_compound ,Anti-Infective Agents ,Coordination Complexes ,Zeta potential ,Biology (General) ,contact angle ,Spectroscopy ,Biological activity ,General Medicine ,Hydrogen-Ion Concentration ,Antimicrobial ,Computer Science Applications ,Ruthenium ,Chemistry ,Pseudomonas aeruginosa ,Benzimidazole ,Staphylococcus aureus ,Cell Survival ,Surface Properties ,QH301-705.5 ,chemistry.chemical_element ,Microbial Sensitivity Tests ,Catalysis ,Article ,Cell Line ,Inorganic Chemistry ,zeta potential ,Escherichia coli ,ruthenium complexes ,Humans ,Hirshfeld surface analysis ,Physical and Theoretical Chemistry ,Molecular Biology ,QD1-999 ,Ligand ,Organic Chemistry ,Biofilm ,Combinatorial chemistry ,Oxygen ,Kinetics ,adhesion study ,chemistry ,electrochemistry ,Biofilms ,Drug Design ,Benzimidazoles ,antibacterial and anti-biofilm activity - Abstract
Antimicrobial resistance is a growing public health concern that requires urgent action. Biofilm-associated resistance to antimicrobials begins at the attachment phase and increases as the biofilms maturate. Hence, interrupting the initial binding process of bacteria to surfaces is essential to effectively prevent biofilm-associated problems. Herein, we have evaluated the antibacterial and anti-biofilm activities of three ruthenium complexes in different oxidation states with 2-pyridin-2-yl-1H-benzimidazole (L1 = 2,2′-PyBIm): [(η6-p-cymene)RuIIClL1]PF6 (Ru(II) complex), mer-[RuIIICl3(CH3CN)L1]·L1·3H2O (Ru(III) complex), (H2L1)2[RuIIICl4(CH3CN)2]2[RuIVCl4(CH3CN)2]·2Cl·6H2O (Ru(III/IV) complex). The biological activity of the compounds was screened against Escherichia coli, Staphylococcus aureus, and Pseudomonas aeruginosa strains. The results indicated that the anti-biofilm activity of the Ru complexes at concentration of 1 mM was better than that of the ligand alone against the P. aeruginosa PAO1. It means that ligand, in combination with ruthenium ion, shows a synergistic effect. The effect of the Ru complexes on cell surface properties was determined by the contact angle and zeta potential values. The electric and physical properties of the microbial surface are useful tools for the examined aggregation phenomenon and disruption of the adhesion. Considering that intermolecular interactions are important and largely define the functions of compounds, we examined interactions in the crystals of the Ru complexes using the Hirshfeld surface analysis.
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- 2021
13. Synthesis of Bacterial Urease Flap Region Peptide Equivalents and Detection of Rheumatoid Arthritis Antibodies Using Two Methods
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Justyna Frączyk, Inga Relich, Grzegorz Czerwonka, Beata Kolesinska, Iwona Konieczna, Joanna Gleńska-Olender, Zbigniew J. Kaminski, and Wiesław Kaca
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chemistry.chemical_classification ,biology ,010405 organic chemistry ,Bioengineering ,Peptide ,Helicobacter pylori ,medicine.disease ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Molecular biology ,Primary and secondary antibodies ,Epitope ,0104 chemical sciences ,Analytical Chemistry ,Serology ,chemistry ,Rheumatoid arthritis ,Drug Discovery ,medicine ,biology.protein ,Molecular Medicine ,Antibody ,Peptide library - Abstract
Rheumatoid arthritis (RA) is an autoimmune inflammatory disease that leads to cartilage damage, joint destruction and bone erosions. Serological analysis is one of the most important tools for diagnosis of RA. The aims of studies were the synthesis of an amino-acid library of epitope CHHLDKSIKEDVQFADSRI corresponding to the flap region of H. pylori urease and investigation recognition by serum antibodies from one rheumatoid arthritis patient (RAP) and one volunteer blood donor (VBD) tested by two semi-quantitative methods. In this study we compared two immunoblot variants for estimation of antibodies recognizing five synthetic peptides corresponding to the urease flap region sequence from different organisms. One immunoblot variant was a classic dot-blot using HRP-conjugated anti-human antibodies, where the level of bound immunoglobulins was estimated by digitization of color formed by reaction with secondary antibody. The second immunoblot variant was based on fluorescein-conjugated anti human antibodies. Both semi-quantitative methods were effective for evaluation of antibodies, and their advantages and disadvantages are discussed. To identify the amino-acid residues critical for reaction with antibodies, an amino-acid scan of the complete sequence of the flap region from Helicobacter pylori urease (epitope BK-61B) was conducted. Each sub-library (1–19) contained 19 peptides, each with different amino acids (a–w) at defined positions. All components of the library were synthesized using a divergent strategy. Patterns of serological reaction with the peptide library were unique for each serum sample from an RA patient or control blood donor. The amino-acid residues in epitope BK-61B necessary for strong reaction with antibodies and preventing reaction with antibodies were identified.
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- 2019
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14. A benzimidazole-based ruthenium(IV) complex inhibits Pseudomonas aeruginosa biofilm formation by interacting with siderophores and the cell envelope, and inducing oxidative stress
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Anna Guzy, Marcin Syczewski, Dorota Narożna, Marcin Drabik, Wiesław Kaca, Andrzej Borkowski, Patrycja Rogala, Dawid Gmiter, Agnieszka Jabłońska-Wawrzycka, Tomasz Cłapa, Grzegorz Czerwonka, Magdalena Dańczuk, and Paweł Kowalczyk
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0301 basic medicine ,Siderophore ,Benzimidazole ,030106 microbiology ,Siderophores ,chemistry.chemical_element ,Aquatic Science ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Ruthenium ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Cell Wall ,medicine ,Animals ,Pseudomonas Infections ,Water Science and Technology ,Binding Sites ,Chemistry ,Pseudomonas aeruginosa ,Biofilm ,Serum Albumin, Bovine ,Models, Theoretical ,Oxidative Stress ,030104 developmental biology ,Biofilms ,Microscopy, Electron, Scanning ,Benzimidazoles ,Cattle ,Cell envelope ,Hydrophobic and Hydrophilic Interactions ,Oligopeptides ,Oxidative stress ,Plasmids - Abstract
Pseudomonas aeruginosa biofilm-associated infections are a serious medical problem, and new compounds and therapies acting through novel mechanisms are much needed. Herein, the authors report a ruthenium(IV) complex that reduces P. aeruginosa PAO1 biofilm formation by 84%, and alters biofilm morphology and the living-to-dead cell ratio at 1 mM concentration. Including the compound in the culture medium altered the pigments secreted by PAO1, and fluorescence spectra revealed a decrease in pyoverdine. Scanning electron microscopy showed that the ruthenium complex did not penetrate the bacterial cell wall, but accumulated on external cell structures. Fluorescence quenching experiments indicated strong binding of the ruthenium complex to both plasmid DNA and bovine serum albumin. Formamidopyrimidine DNA N-glycosylase (Fpg) protein digestion of plasmid DNA isolated after ruthenium(IV) complex treatment revealed the generation of oxidative stress, which was further proved by the observed upregulation of catalase and superoxide dismutase gene expression.
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- 2019
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15. Tuning Anti-Biofilm Activity of Manganese(II) Complexes: Linking Biological Effectiveness of Heteroaromatic Complexes of Alcohol, Aldehyde, Ketone, and Carboxylic Acid with Structural Effects and Redox Activity
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Grzegorz Czerwonka, Paweł Kowalczyk, Patrycja Rogala, Maciej Hodorowicz, Agnieszka Jabłońska-Wawrzycka, Slawomir Michalkiewicz, Beata Cieślak, and Katarzyna Gałczyńska
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crystal structure ,Ketone ,structure–activity relationship ,QH301-705.5 ,Carboxylic acid ,Carboxylic Acids ,Alcohol ,Microbial Sensitivity Tests ,Gram-Positive Bacteria ,010402 general chemistry ,01 natural sciences ,Aldehyde ,Article ,Catalysis ,manganese(II) complexes ,Inorganic Chemistry ,chemistry.chemical_compound ,Coordination Complexes ,Spectroscopy, Fourier Transform Infrared ,Humans ,Structure–activity relationship ,Physical and Theoretical Chemistry ,Biology (General) ,Molecular Biology ,QD1-999 ,Spectroscopy ,chemistry.chemical_classification ,Aldehydes ,Manganese ,010405 organic chemistry ,Organic Chemistry ,Biofilm ,HS surface analysis ,General Medicine ,Ketones ,Antimicrobial ,Combinatorial chemistry ,Anti-Bacterial Agents ,0104 chemical sciences ,Computer Science Applications ,Chemistry ,chemistry ,Alcohols ,Biofilms ,Pseudomonas aeruginosa ,inhibition effect of catalase ,antibacterial and anti-biofilm activity ,Antibacterial activity ,Oxidation-Reduction - Abstract
The constantly growing resistance of bacteria to antibiotics and other antibacterial substances has led us to an era in which alternative antimicrobial therapies are urgently required. One promising approach is to target bacterial pathogens using metal complexes. Therefore, we investigated the possibility of utilizing series of manganese(II) complexes with heteroaromatic ligands: Alcohol, aldehyde, ketone, and carboxylic acid as inhibitors for biofilm formation of Pseudomonas aeruginosa. To complete the series mentioned above, Mn-dipyCO-NO3 with dipyridin-2-ylmethanone (dipyCO) was isolated, and then structurally (single-crystal X-ray analysis) and physicochemically characterized (FT-IR, TG, CV, magnetic susceptibility). The antibacterial activity of the compounds against representative Gram-negative and Gram-positive bacteria was also evaluated. It is worth highlighting that the results of the cytotoxicity assays performed (MTT, DHI HoloMonitorM4) indicate high cell viability of the human fibroblast (VH10) in the presence of the Mn(II) complexes. Additionally, the inhibition effect of catalase activity by the complexes was studied. This paper focused on such aspects as studying different types of intermolecular interactions in the crystals of the Mn(II) complexes as well as their possible effect on anti-biofilm activity, the structure–activity relationship of the Mn(II) complexes, and regularity between the electrochemical properties of the Mn(II) complexes and anti-biofilm activity.
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- 2021
16. Draft Genome of
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Grzegorz, Czerwonka, Dawid, Gmiter, and Katarzyna, Durlik-Popińska
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Cellular and Infection Microbiology ,phosphocholine ,Phosphorylcholine ,lipopolysaccharide ,O Antigens ,Serogroup ,urinary tract infection ,Proteus mirabilis ,genome ,Bacterial Adhesion ,Original Research - Abstract
Proteus mirabilis is a pathogenic, Gram-negative, rod-shaped bacterium that causes ascending urinary tract infections. Swarming motility, urease production, biofilm formation, and the properties of its lipopolysaccharide (LPS) are all factors that contribute to the virulence of this bacterium. Uniquely, members of the O18 serogroup elaborate LPS molecules capped with O antigen polymers built of pentasaccharide repeats; these repeats are modified with a phosphocholine (ChoP) moiety attached to the proximal sugar of each O unit. Decoration of the LPS with ChoP is an important surface modification of many pathogenic and commensal bacteria. The presence of ChoP on the bacterial envelope is correlated with pathogenicity, as decoration with ChoP plays a role in bacterial adhesion to mucosal surfaces, resistance to antimicrobial peptides and sensitivity to complement-mediated killing in several species. The genome of P. mirabilis O18 is 3.98 Mb in size, containing 3,762 protein-coding sequences and an overall GC content of 38.7%. Annotation performed using the RAST Annotation Server revealed genes associated with choline phosphorylation, uptake and transfer. Moreover, amino acid sequence alignment of the translated licC gene revealed it to be homologous to LicC from Streptococcus pneumoniae encoding CTP:phosphocholine cytidylyltransferase. Recognized homologs are located in the O antigen gene clusters of Proteus species, near the wzx gene encoding the O antigen flippase, which translocates lipid-linked O units across the inner membrane. This study reveals the genes potentially engaged in LPS decoration with ChoP in P. mirabilis O18.
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- 2020
17. Ruthenium(IV) Complexes as Potential Inhibitors of Bacterial Biofilm Formation
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Grzegorz Czerwonka, Slawomir Michalkiewicz, Maciej Hodorowicz, Paweł Kowalczyk, Agnieszka Jabłońska-Wawrzycka, and Patrycja Rogala
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Models, Molecular ,Molecular Conformation ,Pharmaceutical Science ,chemistry.chemical_element ,Electrochemistry ,Bacterial Physiological Phenomena ,Chloride ,Article ,Analytical Chemistry ,Supramolecular assembly ,DNA Glycosylases ,lcsh:QD241-441 ,lcsh:Organic chemistry ,Coordination Complexes ,antibacterial and antibiofilm activity ,Drug Discovery ,Oxidizing agent ,medicine ,structural and spectroscopic studies ,Physical and Theoretical Chemistry ,ruthenium ,Bacteria ,Hydrogen bond ,Organic Chemistry ,Biofilm ,Biological activity ,Combinatorial chemistry ,Ruthenium ,Anti-Bacterial Agents ,X-ray diffraction ,chemistry ,electrochemistry ,Chemistry (miscellaneous) ,Biofilms ,Molecular Medicine ,medicine.drug ,DNA Damage - Abstract
With increasing antimicrobial resistance there is an urgent need for new strategies to control harmful biofilms. In this study, we have investigated the possibility of utilizing ruthenium(IV) complexes (H3O)2(HL1)2[RuCl6]·, 2Cl·, 2EtOH (1) and [RuCl4(CH3CN)2](L32)·, H2O (2) (where L1-2-hydroxymethylbenzimadazole, L32-1,4-dihydroquinoxaline-2,3-dione) as effective inhibitors for biofilms formation. The biological activities of the compounds were explored using E. coli, S. aureus, P. aeruginosa PAO1, and P. aeruginosa LES B58. The new chloride ruthenium complexes were characterized by single-crystal X-ray diffraction analysis, Hirshfeld surface analysis, FT-IR, UV-Vis, magnetic and electrochemical (CV, DPV) measurements, and solution conductivity. In the obtained complexes, the ruthenium(IV) ions possess an octahedral environment. The intermolecular classical and rare weak hydrogen bonds, and &pi, ·, &pi, stacking interactions significantly contribute to structure stabilization, leading to the formation of a supramolecular assembly. The microbiological tests have shown complex 1 exhibited a slightly higher anti-biofilm activity than that of compound 2. Interestingly, electrochemical studies have allowed us to determine the relationship between the oxidizing properties of complexes and their biological activity. Probably the mechanism of action of 1 and 2 is associated with generating a cellular response similar to oxidative stress in bacterial cells.
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- 2020
18. Adaptation of bacteria Escherichia coli in presence of quaternary ammonium ionic liquids
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Grzegorz Czerwonka, Marcin Syczewski, Andrzej Borkowski, Tomasz Cłapa, and Łukasz Gutowski
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Gram-negative bacteria ,Health, Toxicology and Mutagenesis ,Microbial Sensitivity Tests ,02 engineering and technology ,010402 general chemistry ,Cell morphology ,01 natural sciences ,chemistry.chemical_compound ,Amphiphile ,Escherichia coli ,Ammonium ,Alkyl ,chemistry.chemical_classification ,biology ,Fatty Acids ,Public Health, Environmental and Occupational Health ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Adaptation, Physiological ,Pollution ,Combinatorial chemistry ,Anti-Bacterial Agents ,0104 chemical sciences ,Quaternary Ammonium Compounds ,Membrane ,chemistry ,Ionic liquid ,Microscopy, Electron, Scanning ,Electrophoresis, Polyacrylamide Gel ,0210 nano-technology ,Bacteria - Abstract
This paper presents the adaptation of Escherichia coli Gram-negative bacteria to increased concentrations of ionic liquids. Theophylline-based quaternary ammonium salts were used as an example of an ionic liquid that on the one hand includes an anion of natural origin and on the other hand is characterized by amphiphilic properties due to aliphatic chains in its structure. Theophylline-based ionic liquids can be synthesized relatively cheaply and easily and can exhibit strong antibacterial properties depending on the alkyl chain length. These compounds can also strongly affect bacterial membrane properties, including changes in electrokinetic potential as well as net surface charge. The experiments performed in this study succeeded in obtaining bacterial cultures growing at a tetradecyltrimethylammonium theophyllinate concentration three times higher than the minimum inhibition and bactericidal concentration. The adapted bacteria were characterized by intriguing changes in morphology and grew in the form of almost one-millimeter spheres in a liquid medium. It was shown that cultivation of adapted bacteria with tetradecyltrimethylammonium theophyllinate resulted in changes in the lipid membrane composition and protein patterns of the bacterial lysates, depending on the ionic liquid concentration. This study also revealed that such bacterial adaptation can increase sensitivity to antibiotics by affecting membrane properties like ionophores. These results can be potentially important with regard to synergistic or antagonistic action with other bactericidal compounds like antibiotics and nanoparticles.
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- 2018
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19. The microbial toxicity of quaternary ammonium ionic liquids is dependent on the type of lipopolysaccharide
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Tomasz Cłapa, Anna Misiewicz, Andrzej Borkowski, Mateusz Szala, Paweł Kowalczyk, Grzegorz Czerwonka, Jolanta Cieśla, and Marta Borowiec
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Lipopolysaccharide ,DNA damage ,02 engineering and technology ,010402 general chemistry ,medicine.disease_cause ,01 natural sciences ,Lipid peroxidation ,chemistry.chemical_compound ,Materials Chemistry ,medicine ,Physical and Theoretical Chemistry ,Escherichia coli ,Spectroscopy ,biology ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Electronic, Optical and Magnetic Materials ,chemistry ,Biochemistry ,Ionic liquid ,Toxicity ,biology.protein ,0210 nano-technology ,Oxidative stress ,Peroxidase - Abstract
In the present study the toxicity of theophylline-based quaternary alkylammonium ionic liquids and their precursors was investigated in relation to smooth and rough Escherichia coli strains. We assumed that the microbial toxicity of the studied amphiphilic compounds was affected by the composition of the lipopolysaccharide (LPS) of Gram-negative bacteria. Our hypothesis was verified using K-12 (smooth) and R1−R4 (rough) strains which are characterised by differences in LPS, especially in the O-antigen region. Interactions between ionic liquids and DNA were also investigated. Digestion by Fpg protein was performed to evaluate DNA damage following both indirect action of ionic liquids and via lipid peroxidation. The results revealed differences in sensitivity to the tested compounds between smooth and rough strains, as well as differences in peroxidase activity and lipid peroxidation. The ionic liquids did not interfere with DNA in vitro, and intracellular DNA damage that occurred after treatment was probably caused by lipid peroxidation and oxidative stress.
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- 2018
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20. Interaction of quaternary ammonium ionic liquids with bacterial membranes – Studies with Escherichia coli R1–R4-type lipopolysaccharides
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Jolanta Cieśla, Paweł Kowalczyk, Marcin Drabik, Tomasz Cłapa, Mateusz Szala, Andrzej Borkowski, Grzegorz Czerwonka, and Anna Misiewicz
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Bacillus cereus ,02 engineering and technology ,010402 general chemistry ,medicine.disease_cause ,01 natural sciences ,chemistry.chemical_compound ,Materials Chemistry ,medicine ,Zeta potential ,Ammonium ,Physical and Theoretical Chemistry ,Escherichia coli ,Spectroscopy ,Chromatography ,biology ,Chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,biology.organism_classification ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Electronic, Optical and Magnetic Materials ,Membrane ,Ionic liquid ,Biophysics ,Pyrene ,0210 nano-technology ,Bacteria - Abstract
Here we investigated the interaction between quaternary ammonium ionic liquids and the bacterial membrane of five different Escherichia coli strains. The strains were K-12 and R1–R4-type lipopolysaccharide strains. Additionally, Bacillus cereus was used as a typical Gram-positive bacterium for comparison. The ionic liquids used in the studies were theophylline- based quaternary ammonium salts with C8–C18 alkane chains. The studied compounds belong to third-generation ionic liquids comprising hydrophobic anions of natural origin, and they potentially exhibit biological activity. The interactions were studied using zeta potential measurements, a membrane lateral diffusion estimate based on the excimerization of pyrene, and cell surface hydrophobicity measurements. The minimum inhibitory and bactericidal concentrations were also studied to compare the responses of the bacterial strains to the ionic liquids. We found that the toxicity of the ionic liquids was strain-dependent, and that they strongly affected the Gram-negative bacterial membrane, causing changes of the zeta potential and membrane lateral diffusion. The results indicate that the interaction of ionic liquids with the bacteria depended significantly on the rough or smooth type of E. coli strains. Such relationships were not explained easily, however, some interesting correlations were found, e.g., the correlation between membrane lateral diffusion and ionic liquid toxicity. The results are important for further studies searching for new antibiotics and other drugs that affect the bacterial membrane. The ionic-liquid-mediated changes of the membrane zeta potential are also important for assessing the interactions of membranes and biofilms with nanoparticles.
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- 2017
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21. Synthesis, Structural Characterization and Antimicrobial Evaluation of Ruthenium Complexes with Heteroaromatic Carboxylic Acids
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Grzegorz Czerwonka, Barbara Barszcz, Maciej Hodorowicz, Patrycja Rogala, Slawomir Michalkiewicz, and Agnieszka Jabłońska-Wawrzycka
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Models, Molecular ,Staphylococcus aureus ,Carboxylic acid ,Carboxylic Acids ,chemistry.chemical_element ,Bioengineering ,Microbial Sensitivity Tests ,Electrochemistry ,Biochemistry ,Ruthenium ,Supramolecular assembly ,Polymer chemistry ,Octahedral molecular geometry ,Escherichia coli ,Organometallic Compounds ,Molecular Biology ,chemistry.chemical_classification ,Molecular Structure ,Hydrogen bond ,General Chemistry ,General Medicine ,Antimicrobial ,Anti-Bacterial Agents ,chemistry ,Biofilms ,Pseudomonas aeruginosa ,Molecular Medicine ,Cyclic voltammetry - Abstract
The antibacterial and antibiofilm activities of two new ruthenium complexes against E. coli, S. aureus, P. aeruginosa PAO1 (laboratory strain) and P. aeruginosa LES B58 (clinical strain) were evaluated. Complexes, mer-[RuIII (2-bimc)3 ] ⋅ H2 O (1) and cis-[RuIV Cl2 (2,3-pydcH)2 ] ⋅ 4H2 O (2), were obtained using aromatic carboxylic acid ligands, namely, 1H-benzimidazole-2-carboxylic acid (2-bimcH) and pyridine-2,3-dicarboxylic acid (2,3-pydcH2 ). Compounds were physicochemically characterized using X-ray diffraction, Hirshfeld surface analysis, IR and UV/VIS spectroscopies, as well as magnetic and electrochemical measurements. Structural characterization revealed that Ru(III) and Ru(IV) ions in the complexes adopt a distorted octahedral geometry. The intermolecular classical and weak hydrogen bonds, and π⋅⋅⋅π contacts significantly contribute to structure stabilization, leading to the formation of a supramolecular assembly. Biological studies have shown that the Ru complexes inhibit the growth of bacteria and biofilm formation by the tested strains and the complexes seem to be a potential as antimicrobial agents.
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- 2019
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22. Characterization of Proteus mirabilis Lipopolysaccharide Samples by Infrared Spectroscopy and Serological Methods
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Grzegorz Czerwonka, Wiesław Kaca, Katarzyna Durlik, and Paulina Żarnowiec
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0303 health sciences ,Chromatography ,biology ,Lipopolysaccharide ,Chemistry ,030302 biochemistry & molecular biology ,Extraction (chemistry) ,Infrared spectroscopy ,biology.organism_classification ,Proteus mirabilis ,Serology ,03 medical and health sciences ,chemistry.chemical_compound ,030304 developmental biology - Abstract
Methods of lipopolysaccharide extraction, purification, and sample validation are presented. Based on serological reaction in ELISA, immunoblotting, and infrared spectra, identities of two LPS preparations from smooth P. mirabilis (O18) PrK 34/57 are presented.
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- 2019
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23. Detection of ureolytic activity of bacterial strains isolated from entomopathogenic nematodes using infrared spectroscopy
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Joanna Matuska-Lyzwa, Grzegorz Czerwonka, Wiesław Kaca, Mariusz Urbaniak, Lukasz Lechowicz, Magdalena Chrapek, Anna Tobiasz, and Agnieszka Korzeniowska-Kowal
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0301 basic medicine ,biology ,Urease ,Host (biology) ,Pseudomonas aeruginosa ,Pseudomonas ,General Medicine ,biology.organism_classification ,medicine.disease_cause ,16S ribosomal RNA ,Applied Microbiology and Biotechnology ,Bacterial cell structure ,Microbiology ,03 medical and health sciences ,030104 developmental biology ,Nematode ,Biochemistry ,medicine ,biology.protein ,Bacteria - Abstract
The pathogenicity of entomopathogenic nematodes (EPNs) depends directly on the presence of bacteria in the nematode digestive tracts. Based on 16S rRNA and MALDI-TOF analyses 20 isolated bacteria were assigned to 10 species with 10 isolates classified as Pseudomonas ssp. Six strains (30%) show ureolytic activity on Christensen medium. Spectroscopic analysis of the strains showed that the ureolytic activity is strongly correlated with the following wavenumbers: 935 cm(-1) in window W4, which carries information about the bacterial cell wall construction and 1158 cm(-1) in window W3 which corresponds to proteins in bacterial cell. A logistic regression model designed on the basis of the selected wavenumbers differentiates ureolytic from non-ureolytic bacterial strains with an accuracy of 100%. Spectroscopic studies and mathematical analyses made it possible to differentiate EPN-associated Pseudomonas sp. strains from clinical Pseudomonas aeruginosa PAO1. These results suggest, that infrared spectra of EPN-associated Pseudomonas sp. strains may reflect its adaptation to the host.
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- 2016
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24. Draft Genome Sequences of Proteus mirabilis K1609 and K670: A Model Strains for Territoriality Examination
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Grzegorz Czerwonka, Justyna M. Drewnowska, Dawid Gmiter, Izabela Swiecicka, and Wiesław Kaca
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ved/biology.organism_classification_rank.species ,Swarming (honey bee) ,Virulence ,Territoriality ,Applied Microbiology and Biotechnology ,Microbiology ,Genome ,Article ,03 medical and health sciences ,Model organism ,Gene ,Proteus mirabilis ,030304 developmental biology ,Genetics ,0303 health sciences ,biology ,030306 microbiology ,ved/biology ,Chromosome Mapping ,Molecular Sequence Annotation ,General Medicine ,biology.organism_classification ,Phenotype ,Genome, Bacterial - Abstract
Proteus mirabilis is a pathogenic Gram-negative bacterium characterized by its ability to swarm across surfaces, which frequently leads to colonization of the urinary tract and causes severe infections. P. mirabilis strains are also well known from their self-recognition phenomenon, referred to as Dienes phenomenon. In this study, we present novel aspect of self-recognition, which is a hierarchy in terms of strains territoriality. We report the draft genome sequences of P. mirabilis K1609 and K670 strains exhibiting the strongest and the weakest territoriality, respectively. Our results indicated that K1609 is closely related to strain BB2000, a model system for self-recognition, comparing with the K670. We annotated genes associated with recognition of kin and swarming initiation control and indicated polymorphisms by which observed differences in territoriality might results from. The phenotypic and genomic features of both strains reveal their application as a model organisms for studying not only the mechanisms of kin-recognition but also strains territoriality, thus providing new approach to the phenomenon. Availability of these genome sequences may facilitate understanding of the interactions between P. mirabilis strains.
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- 2018
25. Characterization of Microbial Communities in Acidified, Sulfur Containing Soils
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Grzegorz Czerwonka, Zdzisław M. Migaszewski, Iwona Konieczna, Wiesław Kaca, Agnieszka Gałuszka, Artur Zieliński, Paulina Żarnowiec, and Agnieszka Malinowska-Gniewosz
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Microbiology (medical) ,DNA, Bacterial ,lcsh:QH426-470 ,lcsh:QR1-502 ,DNA isolation specific method ,Bacillus ,010501 environmental sciences ,01 natural sciences ,Applied Microbiology and Biotechnology ,Microbiology ,lcsh:Microbiology ,chemistry.chemical_compound ,Soil ,Bioremediation ,acidified soil microflora ,RNA, Ribosomal, 16S ,soil biochemical activity ,Soil Pollutants ,Urea ,Food science ,Sulfate ,Phylogeny ,Soil Microbiology ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Bacteria ,Chemistry ,soil bacteria ,Microbiota ,04 agricultural and veterinary sciences ,General Medicine ,Sequence Analysis, DNA ,Sulfur containing ,16S ribosomal RNA ,Isolation (microbiology) ,DNA extraction ,lcsh:Genetics ,Enzyme ,Biodegradation, Environmental ,Soil water ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Acids ,Sulfur - Abstract
Over a period of three years, microbial communities in acidified soil with high sulfur content were analyzed. In soil water extracts ureolytic, proteolytic, oxidoreductive, and lipolytic activity were detected. The presented results indicate that the enzymatic activity of soil microbial communities varied considerably over time. Isolated 26 (80%) bacterial strains belonged to genus Bacillus sp. and were identified by cultivation and 16S rRNA methods. The commercially available procedures for bacterial DNA isolation from acidified soil failed, therefore a new, specific DNA isolation method was established. Ureolytic activity, detected in soil extracts as well as in isolated Bacillus sp. strains may be considered as a tool for the bioremediation of acidified soils with high sulfate content.
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- 2018
26. Comparison of Genomes of Pseudomonas aeruginosa Strains by using Chaos Game Representation
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Magdalena Nowak, Wiesław Kaca, and Grzegorz Czerwonka
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Chaos game representation ,Base pair ,Pseudomonas aeruginosa ,medicine ,Sensitivity (control systems) ,Computational biology ,Biology ,medicine.disease_cause ,Cluster analysis ,Genome - Abstract
Chaos Game Representation method was used to compare full genomes of the several laboratory and clinical strains of Pseudomonas aeruginosa. The sensitivity of method was tested and results indicate that it can be helpful for clustering DNA base pair sequences and clonal differentiation of pathogenic Gram-negative bacterial strains.
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- 2018
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27. Fourier Transform Infrared Spectroscopy (FTIR) as a Tool for the Identification and Differentiation of Pathogenic Bacteria
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Łukasz Lechowicz, Grzegorz Czerwonka, Wiesław Kaca, and Paulina Zarnowiec
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Pharmacology ,Bacteria ,Infrared ,Organic Chemistry ,Analytical chemistry ,Infrared spectroscopy ,Pathogenic bacteria ,Biology ,medicine.disease_cause ,Biochemistry ,Spectroscopy, Fourier Transform Infrared ,Drug Discovery ,medicine ,Molecular Medicine ,Classification methods ,Identification (biology) ,Fourier transform infrared spectroscopy ,Spectroscopy ,Data reduction - Abstract
Methods of human bacterial pathogen identification need to be fast, reliable, inexpensive, and time efficient. These requirements may be met by vibrational spectroscopic techniques. The method that is most often used for bacterial detection and identification is Fourier transform infrared spectroscopy (FTIR). It enables biochemical scans of whole bacterial cells or parts thereof at infrared frequencies (4,000-600 cm(-1)). The recorded spectra must be subsequently transformed in order to minimize data variability and to amplify the chemically-based spectral differences in order to facilitate spectra interpretation and analysis. In the next step, the transformed spectra are analyzed by data reduction tools, regression techniques, and classification methods. Chemometric analysis of FTIR spectra is a basic technique for discriminating between bacteria at the genus, species, and clonal levels. Examples of bacterial pathogen identification and methods of differentiation up to the clonal level, based on infrared spectroscopy, are presented below.
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- 2015
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28. Fourier Transform Infrared Spectroscopy as a Tool in Analysis of Proteus mirabilis Endotoxins
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Paulina, Żarnowiec, Grzegorz, Czerwonka, and Wiesław, Kaca
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Endotoxins ,Lipopolysaccharides ,Principal Component Analysis ,Multivariate Analysis ,Spectroscopy, Fourier Transform Infrared ,Proteus mirabilis - Abstract
Fourier transform infrared spectroscopy (FT-IR) was used to scan whole bacterial cells as well as lipopolysaccharides (LPSs, endotoxins) isolated from them. Proteus mirabilis cells, with chemically defined LPSs, served as a model for the ATR FT-IR method. The paper focuses on three steps of infrared spectroscopy: (1) sample preparation, (2) IR scanning, and (3) multivariate analysis of IR data (principal component analysis, PCA).
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- 2017
29. Fourier Transform Infrared Spectroscopy as a Tool in Analysis of Proteus mirabilis Endotoxins
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Wiesław Kaca, Grzegorz Czerwonka, and Paulina Żarnowiec
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,Materials science ,biology ,030106 microbiology ,Principal component analysis ,Analytical chemistry ,Infrared spectroscopy ,Sample preparation ,Fourier transform infrared spectroscopy ,biology.organism_classification ,Proteus mirabilis - Abstract
Fourier transform infrared spectroscopy (FT-IR) was used to scan whole bacterial cells as well as lipopolysaccharides (LPSs, endotoxins) isolated from them. Proteus mirabilis cells, with chemically defined LPSs, served as a model for the ATR FT-IR method. The paper focuses on three steps of infrared spectroscopy: (1) sample preparation, (2) IR scanning, and (3) multivariate analysis of IR data (principal component analysis, PCA).
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- 2017
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30. Morphological changes in Proteus mirabilis O18 biofilm under the influence of a urease inhibitor and a homoserine lactone derivative
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Agnieszka Jabłońska-Wawrzycka, Patrycja Rogala, Wiesław Kaca, Grzegorz Czerwonka, Sławomir Wąsik, and Michał Arabski
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Urease ,Homoserine ,Polysaccharide ,Hydroxamic Acids ,Biochemistry ,Microbiology ,chemistry.chemical_compound ,4-Butyrolactone ,Spectroscopy, Fourier Transform Infrared ,medicine ,Genetics ,Urea ,Enzyme Inhibitors ,Molecular Biology ,Proteus mirabilis ,chemistry.chemical_classification ,Original Paper ,biology ,Proteus mirabilis O18 ,Acetohydroxamic acid ,Biofilm ,General Medicine ,Urease inhibitor ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,FT-IR ,Interferometry ,chemistry ,Biofilms ,biology.protein ,BHL ,Bacteria ,medicine.drug - Abstract
Proteus mirabilis is a pathogenic gram-negative bacterium that frequently causes kidney infections, typically established by ascending colonization of the urinary tract. The present study is focused on ureolytic activity and urease inhibition in biofilms generated by P. mirabilis O18 cells. Confocal microscopy revealed morphological alterations in biofilms treated with urea and a urease inhibitor (acetohydroxamic acid, AHA), as some swarmer cells were found to protrude from the biofilm. The presence of a quorum-sensing molecule (N-butanoyl homoserine lactone, BHL) increased biofilm thickness and its ureolytic activity. Laser interferometric determination of diffusion showed that urea easily diffuses through P. mirabilis biofilm, while AHA is blocked. This may suggest that the use of urease inhibitors in CAUTIs may by less effective than in other urease-associated infections. Spectroscopic studies revealed differences between biofilm and planktonic cells indicating that polysaccharides and nucleic acids are involved in extracellular matrix and biofilm formation.
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- 2014
31. Zinc(II) complexes with heterocyclic ether, acid and amide : crystal structure, spectral, thermal and antibacterial activity studies
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Patrycja Rogala, Agnieszka Jabłońska-Wawrzycka, Maciej Hodorowicz, Katarzyna Stadnicka, and Grzegorz Czerwonka
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0301 basic medicine ,Denticity ,Hydrogen bond ,Ligand ,Stereochemistry ,Organic Chemistry ,Supramolecular chemistry ,chemistry.chemical_element ,Ether ,Zinc ,Crystal structure ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Inorganic Chemistry ,03 medical and health sciences ,Crystallography ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Amide ,Spectroscopy - Abstract
The reaction of zinc salts with heterocyclic ether (1-ethoxymethyl-2-methylimidazole (1-ExMe-2-MeIm)), acid (pyridine-2,3-dicarboxylic acid (2,3-pydcH2)) and amide (3,5-dimethylpyrazole-1-carboxamide (3,5-DMePzCONH2)) yielded three new zinc complexes formulated as [Zn(1-ExMe-2-MeIm)2Cl2] 1, fac-[Zn(H2O)6][Zn(2,3-pydcH)3]2 2 and [Zn(3,5-DMePz)2(NCO)2] 3. Complexes of 1 and 3 are four-coordinated with a tetrahedron as coordination polyhedron. However, compound 2 forms an octahedral cation–anion complex. The complex 3 was prepared by eliminating of the carboxamide group from the ligand and then the 3,5-dimethylpyrazole (3,5-DMePz) and isocyanates formed were employed as new ligands. The IR and X-ray studies have confirmed a bidentate fashion of coordination of the 2,3-pydcH and monodentate fashion of coordination of the 1-ExMe-2-MeIm and 3,5-DMePz to the Zn(II) ions. The crystal packing of Zn(II) complexes are stabilized by intermolecular classical hydrogen bonds of O–H⋯O and N–H⋯O types. The most interesting feature of the supramolecular architecture of complexes is the existence of C–H⋯O, C–H⋯Cl and C–H⋯π interactions and π⋯π stacking, which also contributes to structural stabilisation. The correlation between crystal structure and thermal stability of zinc complexes is observed. In all compounds the fragments of ligands donor-atom containing go in the last steps. Additionally, antimicrobial activities of compounds were carried out against certain Gram-positive and Gram-negative bacteria and counts of CFU (colony forming units) were also determined. The achieved results confirmed a significant antibacterial activity of some tested zinc complexes. On the basis of the Δ log CFU values the antibacterial activity of zinc complexes follows the order: 3 > 2 > 1. Influence a number of N-donor atoms in zinc environment on antibacterial activity is also observed.
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- 2016
32. Influence of quorum sensing signal molecules on biofilm formation in Proteus mirabilis O18
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Dorota L. Stankowska, Jarosław Dziadek, Sylwia Różalska, Michalina Grosicka, Grzegorz Czerwonka, and Wiesław Kaca
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Homoserine ,Swarming motility ,Acyl-Butyrolactones ,medicine.disease_cause ,Microbiology ,Article ,chemistry.chemical_compound ,Bacterial Proteins ,medicine ,Proteus mirabilis ,Escherichia coli ,Molecular Structure ,biology ,Pseudomonas ,Biofilm ,Quorum Sensing ,Gene Expression Regulation, Bacterial ,General Medicine ,biology.organism_classification ,Quorum sensing ,Proteus ,chemistry ,Biochemistry ,Biofilms - Abstract
The influence of basis of quorum sensing molecules on Proteus strains is much less known as compared to Pseudomonas or Escherichia. We have previously shown that a series of acylated homoserine lactones (acyl-HSL) does not influence the ureolytic, proteolytic, or hemolytic abilities, and that the swarming motility of Proteus mirabilis rods is strain specific. The aim of the presented study was to find out if the presence of a series of acyl-HSL influences biofilm formation of P. mirabilis laboratory strain belonging to O18 serogroup. This serogroup is characterized by the presence of a unique non-carbohydrate component, namely phosphocholine. Escherichia coli and P. mirabilis O18 strains used in this work contains cloned plasmids encoding fluorescent protein genes with constitutive gene expression. In mixed biofilms in stationary and continuous flow conditions, P. mirabilis O18 overgrow whole culture. P. mirabilis O18 strain has genetically proved a presence of AI-2 quorum sensing system. Differences in biofilm structure were observed depending on the biofilm type and culture methods. From tested acylated homoserine lactones (BHL, HHL, OHL, DHL, dDHL, tDHL), a significant influence had BHL on thickness, structure, and the amount of exopolysaccharides produced by biofilms formed by P. mirabilis O18 pDsRed(2).
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- 2011
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33. Phenotypic characterisation of an international Pseudomonas aeruginosa reference panel: Strains of cystic fibrosis origin show less in vivo virulence than non-CF strains
- Author
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Paulina Zarnowiec, Lisa Slachmuylders, Rebecca Weiser, Tsvetelina Paunova-Krasteva, Rita F. Maldonado, Audrey Perry, Tomasz Olszak, Stoyanka Stoitsova, Gilles Brackman, Daria Augustyniak, Craig Winstanley, Tom Coenye, Eshwar Mahenthiralingam, Oto Melter, Grzegorz Czerwonka, Siobhán McClean, Wiesław Kaca, Miguel A. Valvano, Ana S. P. Moreira, Isabel Sá-Correia, James Reilly, Louise Cullen, Rob Lavigne, Zuzanna Drulis-Kawa, Anthony De Soyza, and Pavel Drevinek
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biofiilm ,Cystic Fibrosis ,Virulence ,Lipopolysaccharide ,medicine.disease_cause ,Microbiology ,Cystic fibrosis ,Lethal Dose 50 ,chemistry.chemical_compound ,Pyocyanin ,bacteriophage ,medicine ,Environmental Microbiology ,Animals ,Humans ,Pseudomonas Infections ,Pathogen ,biology ,Pseudomonas aeruginosa ,Biofilm ,medicine.disease ,biology.organism_classification ,Antimicrobial ,Survival Analysis ,Galleria mellonella ,Lepidoptera ,Disease Models, Animal ,Phenotype ,motility ,chemistry ,Locomotion - Abstract
Pseudomonas aeruginosa causes chronic lung infections in people with cystic fibrosis (CF) and acute opportunistic infections in people without CF. Forty two P. aeruginosa strains from a range of clinical and environmental sources were collated into a single reference strain panel to harmonise research on this diverse opportunistic pathogen. To facilitate further harmonized and comparable research on P. aeruginosa, we characterised the panel strains for growth rates, motility, virulence in the Galleria mellonella infection model, pyocyanin and alginate production, mucoid phenotype, lipopolysaccharide (LPS) pattern, biofilm formation, urease activity, antimicrobial and phage susceptibilities. Phenotypic diversity across the P. aeruginosa panel was apparent for all phenotypes examined agreeing with the marked variability seen in this species. However, except for growth rate, the phenotypic diversity among strains from CF versus non-CF sources was comparable. CF strains were less virulent in the G. mellonella model than non-CF strains (p=0.037). Transmissible CF strains generally lacked O antigen, produced less pyocyanin, and had low virulence in G. mellonella. Further, in the three sets of sequential CF strains, virulence, O-antigen expression and pyocyanin production were higher in the earlier isolate compared to the isolate obtained later in infection. Overall, full phenotypic characterization of the defined panel of P. aeruginosa strains increases our understanding of the virulence and pathogenesis of P. aeruginosa and may provide a valuable resource for the testing of novel therapies against this problematic pathogen. ispartof: Microbiology-SGM vol:161 issue:10 pages:1961-77 ispartof: location:England status: published
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- 2015
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34. Detection of ureolytic activity of bacterial strains isolated from entomopathogenic nematodes using infrared spectroscopy
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Lukasz, Lechowicz, Magdalena, Chrapek, Grzegorz, Czerwonka, Agnieszka, Korzeniowska-Kowal, Anna, Tobiasz, Mariusz, Urbaniak, Joanna, Matuska-Lyzwa, and Wieslaw, Kaca
- Subjects
Insecta ,Nematoda ,Pseudomonas ,Animals ,Urea - Abstract
The pathogenicity of entomopathogenic nematodes (EPNs) depends directly on the presence of bacteria in the nematode digestive tracts. Based on 16S rRNA and MALDI-TOF analyses 20 isolated bacteria were assigned to 10 species with 10 isolates classified as Pseudomonas ssp. Six strains (30%) show ureolytic activity on Christensen medium. Spectroscopic analysis of the strains showed that the ureolytic activity is strongly correlated with the following wavenumbers: 935 cm(-1) in window W4, which carries information about the bacterial cell wall construction and 1158 cm(-1) in window W3 which corresponds to proteins in bacterial cell. A logistic regression model designed on the basis of the selected wavenumbers differentiates ureolytic from non-ureolytic bacterial strains with an accuracy of 100%. Spectroscopic studies and mathematical analyses made it possible to differentiate EPN-associated Pseudomonas sp. strains from clinical Pseudomonas aeruginosa PAO1. These results suggest, that infrared spectra of EPN-associated Pseudomonas sp. strains may reflect its adaptation to the host.
- Published
- 2015
35. Analysis of uropathogenic Escherichia coli biofilm formation under different growth conditions
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Wioletta Adamus-Białek, Anna E. Kubiak, and Grzegorz Czerwonka
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Strain (chemistry) ,Urinary Bladder ,Biofilm ,biochemical phenomena, metabolism, and nutrition ,Biology ,Bacterial growth ,biology.organism_classification ,medicine.disease_cause ,General Biochemistry, Genetics and Molecular Biology ,Microbiology ,Culture Media ,chemistry.chemical_compound ,chemistry ,Genes, Bacterial ,Biofilms ,medicine ,Escherichia coli ,Crystal violet ,rpoS ,Incubation ,Bacteria - Abstract
The ability to form different types of biofilm enables bacteria to survive in a harsh or toxic environment. Different structures of biofilms are related to different surfaces and environment of bacterial growth. The aim of this study was analysis of the biofilm formation of 115 clinical uropathogenic Escherichia coli strains under different growth conditions: surface for biofilm formation, medium composition and time of incubation. The biofilm formation after 24 h, 48 h, 72 h and 96 h was determined spectrophotometrically (A531) after crystal violet staining and it was correlated with bacterial growth (A600). The live and dead cells in biofilm structures was also observed on the glass surface by an epi-fluorescence microscope. Additionally, the presence of rpoS, sdiA and rscA genes was analyzed. The statistical significance was estimated by paired T-test. The observed biofilms were different for each particular strain. The biofilm formation was the highest in the rich medium (LB) after 24 h and its level hasn't changed in time. When biofilm level was compared to bacterial growth (relative biofilm) - it was higher in a minimal medium in comparison to enriched medium. These results suggest that most of the bacterial cells prefer to live in a biofilm community under the difficult environmental conditions. Moreover, biofilm formation on polyurethane surface did not correlate with biofilm formation on glass. It suggests that mechanisms of biofilm formation can be correlated with other bacterial properties. This phenomenon may explain different types of biofilm formation among one species and even one pathotype - uropathogenic Escherichia coli.
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- 2015
36. Effects of Saponins against Clinical E. coli Strains and Eukaryotic Cell Line
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Aneta Wegierek-Ciuk, Grzegorz Czerwonka, Wiesław Kaca, Anna Lankoff, and Michał Arabski
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Male ,Erythrocytes ,Health, Toxicology and Mutagenesis ,Antibiotics ,Colony Count, Microbial ,Saponin ,lcsh:Medicine ,Apoptosis ,Cricetinae ,Cytotoxic T cell ,chemistry.chemical_classification ,biology ,medicine.diagnostic_test ,Quillaja saponaria ,Quillaja ,General Medicine ,musculoskeletal system ,Hemolysis ,Anti-Bacterial Agents ,Plant Bark ,Molecular Medicine ,Research Article ,Biotechnology ,Article Subject ,Cell Survival ,medicine.drug_class ,lcsh:Biotechnology ,CHO Cells ,complex mixtures ,Microbiology ,Flow cytometry ,Cricetulus ,lcsh:TP248.13-248.65 ,parasitic diseases ,Escherichia coli ,Genetics ,medicine ,Animals ,Humans ,Molecular Biology ,Cell Proliferation ,Plant Extracts ,lcsh:R ,Saponins ,biology.organism_classification ,medicine.disease ,carbohydrates (lipids) ,chemistry ,Cell culture - Abstract
Saponins are detergent-like substances showing antibacterial as well as anticancer potential. In this study, the effects of saponins fromQuillaja saponariawere analyzed against prokaryotic and eukaryotic cells. Multidrug-resistant clinicalE. colistrains were isolated from human urine. As eukaryotic cells, the CHO-K1 cell lines were applied. Antibacterial effect of ampicillin, streptomycin, and ciprofloxacin in the presence of saponins was measured by cultivation methods. Properties of saponins against CHO-K1 cells were measured by the MTT test, hemolysis assay and flow cytometry. Saponin fromQuillaja saponariahas a cytotoxic effect at concentrations higher than 25 μg/mL and in the range of 12–50 μg/mL significantly increases the level of early apoptotic cells. Saponin at dose of 12 μg/mL enhances the sixE. colistrains growth. We postulate that saponins increase the influx of nutrients from the medium intoE. colicells. Saponins do not have synergetic effects on antibacterial action of tested antibiotics. In contrary, in the presence of saponins and antibiotics, more CFU/mLE. colicells were observed. This effect was similar to saponins action alone towardsE. colicells. In conclusion, saponins was cytotoxic against CHO-K1 cells, whereas againstE. colicells this effect was not observed.
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- 2012
37. The role of Proteus mirabilis cell wall features in biofilm formation
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Łukasz Lechowicz, Klaudia Kałuża, Michalina Grosicka, Wiesław Kaca, Paweł Kowalczyk, Dawid Gmiter, Grzegorz Czerwonka, Anna Guzy, and Magdalena Dańczuk
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Electrophoresis ,0301 basic medicine ,Electrokinetic potential ,Lipopolysaccharide ,030106 microbiology ,Biochemistry ,Microbiology ,Bacterial Adhesion ,Cell wall ,03 medical and health sciences ,chemistry.chemical_compound ,Cell Wall ,Zeta potential ,Genetics ,Crystal violet ,Proteus mirabilis ,Molecular Biology ,Original Paper ,biology ,Biofilm ,Cell surface hydrophobicity (CSH) ,General Medicine ,Adhesion ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Microbial adherence to hydrocarbons (MATH) ,chemistry ,Biofilms ,Epifluorescence microscopy ,Glass ,Hydrophobic and Hydrophilic Interactions ,Bacteria - Abstract
Biofilms formed by Proteus mirabilis strains are a serious medical problem, especially in the case of urinary tract infections. Early stages of biofilm formation, such as reversible and irreversible adhesion, are essential for bacteria to form biofilm and avoid eradication by antibiotic therapy. Adhesion to solid surfaces is a complex process where numerous factors play a role, where hydrophobic and electrostatic interactions with solid surface seem to be substantial. Cell surface hydrophobicity and electrokinetic potential of bacterial cells depend on their surface composition and structure, where lipopolysaccharide, in Gram-negative bacteria, is prevailing. Our studies focused on clinical and laboratory P. mirabilis strains, where laboratory strains have determined LPS structures. Adherence and biofilm formation tests revealed significant differences between strains adhered in early stages of biofilm formation. Amounts of formed biofilm were expressed by the absorption of crystal violet. Higher biofilm amounts were formed by the strains with more negative values of zeta potential. In contrast, high cell surface hydrophobicity correlated with low biofilm amount.
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38. Comparing methods of 17α-ethinylestradiol (EE2) determination in surface water
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Grzegorz Czerwonka and Kaca, W.
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