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1. Complete mitochondrial genome of Sri Lankan Junglefowl (Gallus lafayetti) and phylogenetic study

Author

Hirimuthugoda, Nalini Yasoda, primary, Adeola, Adeniyi C., additional, Chen, Xing, additional, Perera, Patthamesthrige Wimal Anthony, additional, Gunawardena, Weligalle Wedarallage Dewar Asoka, additional, Gunwardana, Humpita Gamaralalage Thilini Nisanka, additional, Yin, Ting-Ting, additional, Wang, Ming-Shan, additional, Li, Gui-Mei, additional, Peng, Min-Sheng, additional, and Zhang, Ya-Ping, additional

Published
2018
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2. Complete mitochondrial genome of Sri Lankan Junglefowl (<italic>Gallus lafayetti</italic>) and phylogenetic study.

Author

Hirimuthugoda, Nalini Yasoda, Adeola, Adeniyi C., Chen, Xing, Perera, Patthamesthrige Wimal Anthony, Gunawardena, Weligalle Wedarallage Dewar Asoka, Gunwardana, Humpita Gamaralalage Thilini Nisanka, Yin, Ting-Ting, Wang, Ming-Shan, Li, Gui-Mei, Peng, Min-Sheng, and Zhang, Ya-Ping

Subjects
JUNGLEFOWL, BIRDS, MITOCHONDRIAL DNA, BIRD phylogeny, NUCLEOTIDE sequence, TRANSFER RNA
Abstract

The complete mitochondrial genomes of two Sri Lankan junglefowl (Gallus lafayetti: CJF) individuals were sequenced by using next-generation sequencing technique. Samples were collected from Rathnapura and Pelmadulla areas in Sri Lanka. The complete mitochondrial DNA is 16,839 bp in length, with a typical mitogenome structure composed of a non-coding control region, 22 tRNA, two rRNA, and 13 protein-coding genes. Overall base composition is 30% A, 23.9% T, 32.3% C, and 13.6% G indicating high content of 54.0% A + T for both individuals. Phylogenetic analysis reveals that CJF samples cluster with the clade of the green junglefowl (Gallus varius) and red junglefowl (Gallus gallus) than to grey junglefowl (Gallus sonerattii: GyJF). This result can be subsequently used to provide essential information for junglefowl evolution. [ABSTRACT FROM AUTHOR]

Published
2018
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