98 results on '"Gyeongmin Kim"'
Search Results
2. Complete mitochondrial genome of Acanthochitona defilippii (Polyplacophora: Chitonida) from South Korea
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I Hyang Kim, Cho Rong Shin, Gyeongmin Kim, Bia Park, Ki Beom Kim, Eun Hwa Choi, and Ui Wook Hwang
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Acanthochitona defilippii ,Acanthochitonidae ,chiton ,mitochondrial genome ,phylogeny ,Genetics ,QH426-470 - Abstract
The chiton (Polyplacophora) occupies a significant position in molluscan evolutionary history as one of the most primitive groups within the phylum Mollusca. Acanthochitona defilippii (Tapparone-Canefri 1874) (Chitonida: Acanthochitonidae) is a commonly found intertidal chiton species in South Korea. In this study, we characterized the complete mitochondrial genome of A. defilippii (14,999 bp long), comprising 13 protein-coding genes (PCGs), 22 transfer RNA genes, two ribosomal RNA genes, and an A + T rich region (166 bp). The base composition is as follows: 31.82% for A, 11.63% for C, 16.69% for G, and 39.86% for T. We reconstructed a maximum likelihood (ML) tree to elucidate phylogenetic relationships among the eight chitonid families using the nucleotide sequences of all PCGs. The ML tree revealed that A. defilippii clustered with Acanthochitona avicula (BP 100) within the family Acanthochitonidae. Acanthochitonidae formed a sister group with Mopaliidae. The results could provide a valuable understanding the phylogenetic relationships of chitonid species.
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- 2024
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3. The complete mitochondrial genome of a ground beetle Synuchus nitidus (Carabidae: Harpalinae: Sphodrini) from South Korea
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Dooyoung Kim, Gyeongmin Kim, Cho Rong Shin, Bia Park, Eun Hwa Choi, and Ui Wook Hwang
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Synuchus nitidus ,Sphodrini ,ground beetle ,mitochondrial genome ,phylogeny ,Genetics ,QH426-470 - Abstract
The ground beetle Synuchus nitidus (Motschulsky, 1861) (Carabidae: Harpalinae: Sphodrini) is one of the most common species in the forests of South Korea, which has the potential to be utilized as an environmental indicator. Here, we characterized the complete mitochondrial genome (mitogenome) of S. nitidus, which is the first in the harpaline tribe Sphodrini. Its genome is 16,392 bp in length and composed of 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and an A + T rich region. In addition, we reconstructed a maximum likelihood tree to elucidate the phylogenetic position of Sphodrini among the seven harpaline tribes using nucleotide sequences of the 13 PCGs. The ML tree supported a monophyletic clade of the subfamily Harpalinae and showed a close relationship between Sphodrini and Lebinii with a low bootstrap value. The complete mitogenome of S. nitidus could be helpful for molecular species identification and exploring phylogenetic relationships among carabids.
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- 2024
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4. Deep Temporal Clustering of Pathological Gait Patterns in Post-Stroke Patients Using Joint Angle Trajectories: A Cross-Sectional Study
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Gyeongmin Kim, Hyungtai Kim, Yun-Hee Kim, Seung-Jong Kim, and Mun-Taek Choi
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post-stroke ,hemiplegia ,gait patterns ,kinematic data ,time-series data ,deep clustering ,Technology ,Biology (General) ,QH301-705.5 - Abstract
Rehabilitation of gait function in post-stroke hemiplegic patients is critical for improving mobility and quality of life, requiring a comprehensive understanding of individual gait patterns. Previous studies on gait analysis using unsupervised clustering often involve manual feature extraction, which introduces limitations such as low accuracy, low consistency, and potential bias due to human intervention. This cross-sectional study aimed to identify and cluster gait patterns using an end-to-end deep learning approach that autonomously extracts features from joint angle trajectories for a gait cycle, minimizing human intervention. A total of 74 sub-acute post-stroke hemiplegic patients with lower limb impairments were included in the analysis. The dataset comprised 219 sagittal plane joint angle and angular velocity trajectories from the hip, knee, and ankle joints during gait cycles. Deep temporal clustering was employed to cluster them in an end-to-end manner by simultaneously optimizing feature extraction and clustering, with hyperparameter tuning tailored for kinematic gait cycle data. Through this method, six optimal clusters were selected with a silhouette score of 0.2831, which is a relatively higher value compared to other clustering algorithms. To clarify the characteristics of the selected groups, in-depth statistics of spatiotemporal, kinematic, and clinical features are presented in the results. The results demonstrate the effectiveness of end-to-end deep learning-based clustering, yielding significant performance improvements without the need for manual feature extraction. While this study primarily utilizes sagittal plane data, future analysis incorporating coronal and transverse planes as well as muscle activity and gait symmetry could provide a more comprehensive understanding of gait patterns.
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- 2025
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5. Robust Reinforcement Learning Under Dimension-Wise State Information Drop
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Gyeongmin Kim, Jeonghye Kim, Suyoung Lee, Jaewoo Baek, Howon Moon, Sangheon Shin, and Youngchul Sung
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Dimension-wise state information drop ,masked observation ,drop information embedding ,reinforcement learning ,robust learning ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Recent advancements in offline reinforcement learning (RL) have showcased the potential for leveraging static datasets to train optimal policies. However, real-world applications often face challenges due to missing or incomplete state information caused by imperfect sensor performance or intentional interlaces. We propose the Dimension-Wise Drop Decision Transformer (D3T), a novel framework designed to address dimension-wise data loss in sensor observations, enhancing the robustness of RL algorithms in real-world scenarios. D3T innovatively incorporates dimension-wise drop information embeddings within the Transformer architecture, facilitating effective decision-making even with incomplete observations. Our evaluation in the D4RL MuJoCo domain demonstrates that D3T significantly outperforms existing methods such as the Decision Transformer, particularly with substantial dimension-wise drops of observations. These results confirm D3T’s capability in managing real-world imperfections in state observations and illustrate its potential to substantially expand the applicability of RL in more complex and dynamic environments.
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- 2024
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6. Molecular population genetics and phylogeographic studies of Ligia exotica and Ligia cinerascens in East Asia
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Gyeongmin Kim, Hyemin Kim, Sohyun Mun, Eun Hwa Choi, Anh D. Nguyen, and Ui Wook Hwang
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Ligia exotica ,Ligia cinerascens ,population genetic structure ,phylogeographic distribution ,East Asia ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
IntroductionSea slater, in the genus Ligia, is widespread in rocky shore habitats, and the taxon is easily isolated due to its limited dispersal capacity. Therefore, most Ligia species exhibit an allopatric distribution, but Ligia exotica and L. cinerascens exhibit an overlapping distribution distribution in East Asia. Previous studies on both species have confirmed the existence of highly divergent lineages based on 16S rRNA.MethodsIn the present study, 282 Ligia individuals were collected at ten, three, and three sites in South Korea, Japan, and Vietnam, respectively, and 41 haplotypes were observed based on 16S rRNA.Results and discussionThe results of phylogeny, phylogenetic network, and TCS network, Principal Coordinates Analysis, and four Molecular Species Delimitation Analyses revealed that six genetic lineages including L. cinerascens, Lineages N and S of L. exotica, Ligia sp. 1, sp.2 and sp.3 were present. The three genetic lineages, including L. cinerascens, Lineage N of L. exotica, and Lineage S of L. exotica, were also identified in the phylogeny based on a nuclear gene of the sodium–potassium ATPase α-subunit (Nak). Phylogeographic analysis revealed that L. cinerascens and Lineage N of L. exotica were distributed overlappingly in South Korea, Japan, and the northern region of China. Generally, the two lineages of L. exotica were distributed allopatrically, which was more evident along the coastline of mainland China than that of Japan. The results of time-calibrated phylogeny suggested that the speciation events of Ligia species might be associated with Japanese mainland formation from Oligocene to Miocene (approximately 30-5 million years ago, Mya). The results of the present study provide insights that could facilitate the understanding of the evolutionary history of Ligia, tracking of geological processes, and evolutionary effects of palaeogeographical events at the population level.
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- 2023
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7. Possible species discrimination of a blotched nerite Nerita albicilla with their distribution pattern and demographic history in the Indo-Pacific
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Seonghyeon Hong, Bia Park, Gyeongmin Kim, Eun Hwa Choi, and Ui Wook Hwang
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Medicine ,Science - Abstract
Abstract The blotched nerite Nerita albicilla (Linnaeus 1758) is distributed in intertidal areas of the Indo-Pacific. In South Korea, it has been found only in the southernmost region of Jeju Island so far. Owing to its limited distribution, it can be a promising intertidal species helpful for monitoring global climate change effects in the Korean Peninsula. We performed population genetic analyses based on 393 COI haplotypes from 697 N. albicilla, including 167 from this study and 530 from public databases. The results showed that there are two distinct genetic lineages in N. albicilla: PAIO (Palearctic, Australasia, Indo-Malay, and Oceania) and Afrotropic lineages. DNA barcoding gap analyses indicated that the two lineages could be differentiated into two different species: N. albicilla (PAIO) and N. originalis sp. nov. (Afrotropic) (3.96%). Additionally, it was revealed that their divergence time was ca. 5.96 Ma and dramatic diversification of COI haplotypes occurred during the late Pliocene and Pleistocene. The results of MDA, BSP, and neutrality test implied recent population size expansion, which was estimated to be ca. 250 Ka. Finally, we discussed whether the observation of N. originalis sp. nov. in South Korea is due to the northward migration through ocean currents caused by global warming or due to artificial activity through marine transportation.
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- 2023
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8. Drug_SNSMiner: standard pharmacovigilance pipeline for detection of adverse drug reaction using SNS data
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Seunghee Lee, Hyekyung Woo, Chung Chun Lee, Gyeongmin Kim, Jong-Yeup Kim, and Suehyun Lee
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Medicine ,Science - Abstract
Abstract As society continues to age, it is becoming increasingly important to monitor drug use in the elderly. Social media data have been used for monitoring adverse drug reactions. The aim of this study was to determine whether social network studies (SNS) are useful sources of drug side effects information. We propose a method for utilizing SNS data to plot the known side effects of geriatric drugs in a dosing map. We developed a lexicon of drug terms associated with side effects and mapped patterns from social media data. We confirmed that well-known side effects may be obtained by utilizing SNS data. Based on these results, we propose a pharmacovigilance pipeline that can be extended to unknown side effects. We propose the standard analysis pipeline Drug_SNSMiner for monitoring side effects using SNS data and evaluated it as a drug prescription platform for the elderly. We confirmed that side effects may be monitored from the consumer’s perspective based on SNS data using only drug information. SNS data were deemed good sources of information to determine ADRs and obtain other complementary data. We established that these learning data are invaluable for AI requiring the acquisition of ADR posts on efficacious drugs.
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- 2023
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9. Generation of multilineage liver organoids with luminal vasculature and bile ducts from human pluripotent stem cells via modulation of Notch signaling
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Hyo Jin Kim, Gyeongmin Kim, Kyun Yoo Chi, Hyemin Kim, Yu Jin Jang, Seongyea Jo, Jihun Lee, Youngseok Lee, Dong-Hun Woo, Choongseong Han, Sang Kyum Kim, Han-Jin Park, and Jong-Hoon Kim
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Liver organoid ,Vasculature ,Bile duct ,Notch ,Hepatic stellate cell ,Fibrosis ,Medicine (General) ,R5-920 ,Biochemistry ,QD415-436 - Abstract
Abstract Background The generation of liver organoids recapitulating parenchymal and non-parenchymal cell interplay is essential for the precise in vitro modeling of liver diseases. Although different types of multilineage liver organoids (mLOs) have been generated from human pluripotent stem cells (hPSCs), the assembly and concurrent differentiation of multiple cell types in individual mLOs remain a major challenge. Particularly, most studies focused on the vascularization of mLOs in host tissue after transplantation in vivo. However, relatively little information is available on the in vitro formation of luminal vasculature in mLOs themselves. Methods The mLOs with luminal blood vessels and bile ducts were generated by assembling hepatic endoderm, hepatic stellate cell-like cells (HscLCs), and endothelial cells derived entirely from hPSCs using 96-well ultra-low attachment plates. We analyzed the effect of HscLC incorporation and Notch signaling modulation on the formation of both bile ducts and vasculature in mLOs using immunofluorescence staining, qRT-PCR, ELISA, and live-perfusion imaging. The potential use of the mLOs in fibrosis modeling was evaluated by histological and gene expression analyses after treatment with pro-fibrotic cytokines. Results We found that hPSC-derived HscLCs are crucial for generating functional microvasculature in mLOs. HscLC incorporation and subsequent vascularization substantially reduced apoptotic cell death and promoted the survival and growth of mLOs with microvessels. In particular, precise modulation of Notch signaling during a specific time window in organoid differentiation was critical for generating both bile ducts and vasculature. Live-cell imaging, a series of confocal scans, and electron microscopy demonstrated that blood vessels were well distributed inside mLOs and had perfusable lumens in vitro. In addition, exposure of mLOs to pro-fibrotic cytokines induced early fibrosis-associated events, including upregulation of genes associated with fibrotic induction and endothelial cell activation (i.e., collagen I, α-SMA, and ICAM) together with destruction of tissue architecture and organoid shrinkage. Conclusion Our results demonstrate that mLOs can reproduce parenchymal and non-parenchymal cell interactions and suggest that their application can advance the precise modeling of liver diseases in vitro.
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- 2023
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10. CBITS: Crypto BERT Incorporated Trading System
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Gyeongmin Kim, Minsuk Kim, Byungchul Kim, and Heuiseok Lim
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Cryptocurrency ,Korean pre-trained language model ,sentiment analysis ,bitcoin trading models ,agglutinative language ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Most textual analysis-based trading approaches in cryptocurrency (crypto) involve lexical, rule-based methods for extracting news sentiments. Furthermore, language models (LMs) are not always suitable for the crypto domain due to jargon that is not covered in general-purpose texts. This study answers the question of “Is it possible that the LMs can profit by effectively applying the sentiment score of the natural language processing task with chart score in the BTC trading system?” by focusing on the effectiveness of both scores, which significantly affect the profit of the trading system. We introduce CBITS: Cryptocurrency BERT Incorporated Trading System based on pre-trained LMs for Korean crypto sentiment analysis to aid Bitcoin (BTC) trading models. We pre-trained crypto-specific LMs, which are transformer encoder-based architectures. Along with our pre-trained LMs, we also present our custom fine-tuning dataset used to train our LMs on the BTC sentiment classifier and show that using sentiment scores along with BTC chart data boosts the performance of BTC trading models and also allows us to create a market-neutral trading strategy.
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- 2023
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11. Towards Harnessing the Most of ChatGPT for Korean Grammatical Error Correction
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Chanjun Park, Seonmin Koo, Gyeongmin Kim, and Heuiseok Lim
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Korean grammatical error correction ,large language model ,K-NCT ,ChatGPT ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
In this study, we conduct a pioneering and comprehensive examination of ChatGPT’s (GPT-3.5 Turbo) capabilities within the realm of Korean Grammatical Error Correction (K-GEC). Given the Korean language’s agglutinative nature and its rich linguistic intricacies, the task of accurately correcting errors while preserving Korean-specific sentiments is notably challenging. Utilizing a systematic categorization of Korean grammatical errors, we delve into a meticulous, case-specific analysis to identify the strengths and limitations of a ChatGPT-based correction system. We also critically assess influential parameters like temperature and specific error criteria, illuminating potential strategies to enhance ChatGPT’s efficacy in K-GEC tasks. Our findings offer valuable contributions to the expanding domain of NLP research centered on the Korean language.
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- 2024
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12. Enhancing Code Similarity with Augmented Data Filtering and Ensemble Strategies
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Gyeongmin Kim, Minseok Kim, and Jaechoon Jo
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code similarity ,language model ,software productivity ,codebert ,cross-validated ensemble. ,Computer software ,QA76.75-76.765 - Abstract
Although COVID-19 has severely affected the global economy, information technology (IT) employees managed to perform most of their work from home. Telecommuting and remote work have promoted a demand for IT services in various market sectors, including retail, entertainment, education, and healthcare. Consequently, computer and information experts are also in demand. However, producing IT, experts is difficult during a pandemic owing to limitations, such as the reduced enrollment of international students. Therefore, researching increasing software productivity is essential; this study proposes a code similarity determination model that utilizes augmented data filtering and ensemble strategies. This algorithm is the first automated development system for increasing software productivity that addresses the current situation—a worldwide shortage of software dramatically improves performance in various downstream natural language processing tasks (NLP). Unlike general-purpose pre-trained language models (PLMs), CodeBERT and GraphCodeBERT are PLMs that have learned both natural and programming languages. Hence, they are suitable as code similarity determination models. The data filtering process consists of three steps: (1) deduplication of data, (2) deletion of intersection, and (3) an exhaustive search. The best mating (BM) 25 and length normalization of BM25 (BM25L) algorithms were used to construct positive and negative pairs. The performance of the model was evaluated using the 5-fold cross-validation ensemble technique. Experiments demonstrate the effectiveness of the proposed method quantitatively. Moreover, we expect this method to be optimal for increasing software productivity in various NLP tasks.
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- 2022
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13. Verification of a Dataset for Korean Machine Reading Comprehension with Numerical Discrete Reasoning over Paragraphs
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Gyeongmin Kim and Jaechoon Jo
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machine reading comprehension ,numerical reasoning ,language model ,electra ,low-resource language. ,Computer software ,QA76.75-76.765 - Abstract
Numerical reasoning in machine reading comprehension (MRC) has demonstrated significant performance improvements in the past few years. However, due to the process being restricted to specific languages, low-resource languages are not considered, and MRC studies on such languages are limited. In addition, the methods that rely on existing information extracted within the span of a paragraph have limitations in responding to questions requiring actual reasoning. To overcome these shortcomings, this study establishes a dataset for learning Korean Question and Answering (QA) models that not only answer within the span of passages but also perform numerical reasoning on passages and questions. Its efficacy was verified by training the model. We recruited eight annotators to tag the ground truth label, and they annotated datasets with 920, 115, and 115 passages in the train, dev, and test, respectively. A simple yet sophisticated automatic inter-annotation tool was created by effectively reducing the possibility of inaccuracy and error entailed by humans in the data construction process. This tool used common KoBERT and KoELECTRA. We defined four general conditions, and six conditions humans must inspect and fine-tune the pre-trained language models with numerically aware architecture. The KoELECTRA and NumNet+ with KoELECTRA were fine-tuned, and experiments in identical hyperparameter settings showed that compared with other models, the performance of NumNet+ with KoELECTRA was higher by more than 1.3 points. Our research contributes to the Korean MRC research and suggests potential and insight into MRC models capable of numerical reasoning.
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- 2022
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14. The first case report of thorn-induced Alternaria alternata infection of the hand in an immunocompetent host
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Gyeongmin Kim, Seung Jin Yoo, Jeong Rae Yoo, and Kyu Bum Seo
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Alternaria alternata ,Fungal infection ,Thorn injury ,Extensor tenosynovitis ,Septic arthritis ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Fungal infection secondary to a penetrating plant thorn injury in upper extremities is infrequently reported especially in immunocompetent hosts. Alternaria is a dematicaceous hyphomycete, commonly found in decay and plant pathogens, and Alternaria alternata has been regarded as the most frequent species among more than 400 s of its species. This case is the first report of thorn-induced Alternaria alternata infection of the hand in an immunocompetent host. Case presentation A 47-year-old male patient was admitted to our institution with persistent pain and swelling of the right hand even after a prior surgical removal of a previous thorn injury. Upon impression of abscess, chronic extensor tenosynovitis, and septic arthritis at the 3rd metacarpophalangeal joint based on advanced imaging, the patient underwent surgical incision and drainage. Intraoperative culture, biopsy, and gene molecular sequencing results revealed fungal infection with Alternaria alternata. Postoperatively, the patient was treated with oral itraconazole (200 mg q 12 h) for nine consecutive months. Conclusions We report the first case of chronic extensor tenosynovitis and septic arthritis of the hand with Alternaria alternata after a thorn injury in an immunocompetent host. Despite rare incidences of fungal extensor tenosynovitis and septic arthritis, the current case strongly suggests a careful examination of social history and surgical debridement along with a prolonged use of appropriate anti-fungal agents in thorn injuries.
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- 2022
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15. Advanced Probabilistic Power Flow Method Using Vine Copulas for Wind Power Capacity Expansion
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Ryungyeong Lee, Gyeongmin Kim, Jin Hur, and Hunyoung Shin
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Probabilistic power flow ,wind power ,vine copula ,Wasserstein distance ,bulk power systems ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
As the use of renewable energy is continuously increasing, power systems are currently exposed to greater uncertainty and variability, which can lead to severe power system stability issues. Therefore, a power system analysis tool should be devised to assess the impact of renewable energy integration along with an accurate modeling of their stochastic characteristics. In this study, an advanced probabilistic power flow (PPF) method is developed using vine copulas that captures the complex dependency of the stochastic wind power generated from multiple wind sites. The proposed method also involves the use of a function for selecting the probability models of wind speeds by regions in a sophisticated manner. The effectiveness of the proposed method is tested on an IEEE bus system as well as, on a South Korean power system with thousands of buses and transmission lines using PSS/E with Python API. The simulations demonstrate that the proposed method can more accurately evaluate the power system risks with the sophisticated modeling of wind power in multiple sites as compared to the deterministic approach or the PPF with independent sampling.
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- 2022
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16. Transcriptome profiling for developmental stages Protaetia brevitarsis seulensis with focus on wing development and metamorphosis
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Jihye Hwang, Eun Hwa Choi, Bia Park, Gyeongmin Kim, Chorong Shin, Joon Ha Lee, Jae Sam Hwang, and Ui Wook Hwang
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Medicine ,Science - Abstract
A white-spotted flower chafer Protaetia brevitarsis seulensis widely distributed in Asian countries is traditionally used in oriental medicine. This study explored gene expression abundance with respect to wing development and metamorphosis in P. b. seulensis based on the large-scale RNA-seq data. The transcriptome assembly consists of 23,551 high-quality transcripts which are approximately 96.7% covered. We found 265 wing development genes, 19 metamorphosis genes, and 1,314 candidates. Of the 1,598 genes, 1,594 are included exclusively in cluster 4 with similar gene co-expression patterns. The network centrality analyses showed that wing development- and metamorphosis-related genes have a high degree of betweenness centrality and are expressed most highly in eggs, moderately in pupa and adults, and lowest in larva. This study provides some meaningful clues for elucidating the genetic modulation mechanism of wing development and metamorphosis in P. b. seulensis.
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- 2023
17. Associations between digital media use and lack of physical exercise among middle-school adolescents in Korea
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Gyeongmin Kim, Hyunsuk Jeong, and Hyeon Woo Yim
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adolescent ,sex characteristics ,video games ,screen time ,exercise ,Medicine - Abstract
OBJECTIVES The reported effects of digital media overuse on physical activity among adolescents are inconsistent. This study examined the association between hours of digital media use and lack of moderate-intensity physical exercise (mPE) according to the type of digital media. METHODS This study included 1,837 middle school students from the iCURE (Internet user Cohort for Unbiased Recognition of gaming disorder in Early Adolescence) study conducted in Korea. Hours spent using digital media were measured by self-reported daily usage time for Internet games, messengers, social media, and watching game streaming on weekdays. Lack of mPE was defined as performing a minimum of 30 minutes at a time less than twice weekly. Multivariable logistic regression analysis stratified by sex was performed. RESULTS Among male students, the group with the highest hours of using either Internet games or watching game streaming was more likely to lack mPE than each non-user group. In contrast, among male students, the group using either messengers or social media had a higher rate of mPE compared to each non-user group. Female students showed no association between hours spent using Internet games, messengers, social media, or watching game streaming and a lack of mPE. CONCLUSIONS Among male middle school students in Korea, the excessive use of Internet games or watching game streaming was associated with a lack of mPE. Thus, guidelines should be established regarding adolescent use of internet games and watching game streaming.
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- 2023
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18. Generation of cytochrome P450 enzyme-polymorphic human induced pluripotent stem cell lines with CYP2D6*10/CYP3A5*3C and CYP2D6*10/CYP2C19*2
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Jaehun Lee, Gyeongmin Kim, Kyun Yoo Chi, Choongseong Han, and Jong-Hoon Kim
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Biology (General) ,QH301-705.5 - Abstract
Cytochrome P450 (CYP) reaction phenotyping has become crucial for predicting drug reactions and side effects. Single nucleotide polymorphisms (SNPs) in CYP genes alter drug metabolism capacity and cause unexpected drug-related reactions. Here, we established two human induced pluripotent stem cell (hiPSC) lines with pharmacologically important SNPs in CYP2D6 in conjunction with CYP2C19 or CYP3A5 genes. These hiPSC lines can serve as valuable resources for expanding our understanding of the relationships between genotypes and drug reactions.
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- 2022
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19. Prompt Language Learner with Trigger Generation for Dialogue Relation Extraction
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Jinsung Kim, Gyeongmin Kim, Junyoung Son, and Heuiseok Lim
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dialogue relation extraction ,information extraction ,trigger generation ,prompt-based learning ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Dialogue relation extraction identifies semantic relations between entity pairs in dialogues. This research explores a methodology harnessing the potential of prompt-based fine-tuning paired with a trigger-generation approach. Capitalizing on the intrinsic knowledge of pre-trained language models, this strategy employs triggers that underline the relation between entities decisively. In particular, diverging from the conventional extractive methods seen in earlier research, our study leans towards a generative manner for trigger generation. The dialogue-based relation extraction (DialogeRE) benchmark dataset features multi-utterance environments of colloquial speech by multiple speakers, making it critical to capture meaningful clues for inferring relational facts. In the benchmark, empirical results reveal significant performance boosts in few-shot scenarios, where the availability of examples is notably limited. Nevertheless, the scarcity of ground-truth triggers for training hints at potential further refinements in the trigger-generation module, especially when ample examples are present. When evaluating the challenges of dialogue relation extraction, combining prompt-based learning with trigger generation offers pronounced improvements in both full-shot and few-shot scenarios. Specifically, integrating a meticulously crafted manual initialization method with the prompt-based model—considering prior distributional insights and relation class semantics—substantially surpasses the baseline. However, further advancements in trigger generation are warranted, especially in data-abundant contexts, to maximize performance enhancements.
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- 2023
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20. Liolophura species discrimination with geographical distribution patterns and their divergence and expansion history on the northwestern Pacific coast
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Eun Hwa Choi, Mi Yeong Yeo, Gyeongmin Kim, Bia Park, Cho Rong Shin, Su Youn Baek, and Ui Wook Hwang
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Medicine ,Science - Abstract
Abstract The chiton Liolophura japonica (Lischke 1873) is distributed in intertidal areas of the northwestern Pacific. Using COI and 16S rRNA, we found three genetic lineages, suggesting separation into three different species. Population genetic analyses, the two distinct COI barcoding gaps albeit one barcoding gap in the 16S rRNA, and phylogenetic relationships with a congeneric species supported this finding. We described L. koreana, sp. nov. over ca. 33°24′ N (JJ), and L. sinensis, sp. nov. around ca. 27°02′–28°00′ N (ZJ). We confirmed that these can be morphologically distinguished by lateral and dorsal black spots on the tegmentum and the shape of spicules on the perinotum. We also discuss species divergence during the Plio-Pleistocene, demographic expansions following the last interglacial age in the Pleistocene, and augmentation of COI haplotype diversity during the Pleistocene. Our study sheds light on the potential for COI in examining marine invertebrate species discrimination and distribution in the northwestern Pacific.
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- 2021
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21. Characterization of metapopulation of Ellobium chinense through Pleistocene expansions and four covariate COI guanine-hotspots linked to G-quadruplex conformation
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Cho Rong Shin, Eun Hwa Choi, Gyeongmin Kim, Su Youn Baek, Bia Park, Jihye Hwang, Jumin Jun, Hyun Jong Kil, Hyunkyung Oh, Kyungjin Lee, Sa Heung Kim, Jongrak Lee, Seung Jik Suh, Dong-min Park, Ho Young Suk, Yong Seok Lee, Young Sup Lee, and Ui Wook Hwang
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Medicine ,Science - Abstract
Abstract The land snail Ellobium chinense (L. Pfeiffer, 1855) (Eupulmonata, Ellobiida, Ellobiidae), which inhabits the salt marshes along the coastal areas of northwestern Pacific, is an endangered species on the IUCN Red List. Over recent decades, the population size of E. chinense has consistently decreased due to environmental interference caused by natural disasters and human activities. Here, we provide the first assessment of the genetic diversity and population genetic structures of northwestern Pacific E. chinense. The results analyzed with COI and microsatellites revealed that E. chinense population exhibit metapopulation characteristics, retaining under the influence of the Kuroshio warm currents through expansion of the Late-Middle and Late Pleistocene. We also found four phylogenetic groups, regardless of geographical distributions, which were easily distinguishable by four unidirectional and stepwise adenine-to-guanine transitions in COI (sites 207–282–354–420: A–A–A–A, A–A–G–A, G–A–G–A, and G–G–G–G). Additionally, the four COI hotspots were robustly connected with a high degree of covariance between them. We discuss the role of these covariate guanines which link to form four consecutive G-quadruplexes, and their possible beneficial effects under positive selection pressure.
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- 2021
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22. Enhancing Korean Named Entity Recognition With Linguistic Tokenization Strategies
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Gyeongmin Kim, Junyoung Son, Jinsung Kim, Hyunhee Lee, and Heuiseok Lim
- Subjects
Named entity recognition ,Korean pre-trained language model ,natural language processing ,tokenization ,linguistic segmentation ,agglutinative language ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Tokenization is a significant primary step for the training of the Pre-trained Language Model (PLM), which alleviates the challenging Out-of-Vocabulary problem in the area of Natural Language Processing. As tokenization strategies can change linguistic understanding, it is essential to consider the composition of input features based on the characteristics of the language for model performance. This study answers the question of “Which tokenization strategy enhances the characteristics of the Korean language for the Named Entity Recognition (NER) task based on a language model?” focusing on tokenization, which significantly affects the quality of input features. We present two significant challenges for the NER task with the agglutinative characteristics in the Korean language. Next, we quantitatively and qualitatively analyze the coping process of each tokenization strategy for these challenges. By adopting various linguistic segmentation such as morpheme, syllable and subcharacter, we demonstrate the effectiveness and prove the performance between PLMs based on each tokenization strategy. We validate that the most consistent strategy for the challenges of the Korean language is a syllable based on Sentencepiece.
- Published
- 2021
- Full Text
- View/download PDF
23. Methodology for Security Analysis of Grid- Connected Electric Vehicle Charging Station With Wind Generating Resources
- Author
-
Gyeongmin Kim and Jin Hur
- Subjects
Electric vehicle ,charging station ,wind generating resources ,charging demand ,wind power forecasting ,security analysis ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
The project Carbon-Free Island Jeju by 2030 promoted by the Republic of Korea aims to expand the renewable energy sources centered on wind power in Jeju Island and supply electric vehicles for eco-friendly mobility. However, the increased penetration rate of electric vehicles and expansion of variable renewable energy sources can accelerate the power demand and uncertainty in the power generation output. In this paper, power system analysis is performed through electric vehicle charging demand and wind power outputs prediction, and an electric vehicle charging decentralization algorithm is proposed to mitigate system congestion. In order to predict electric vehicle charging demand, the measurement data were analyzed, and random sampling was performed by applying the weight of charging frequency for each season and time. In addition, wind power outputs prediction was performed using the ARIMAX model. Input variables are wind power measurement data and additional explanatory variables (wind speed). Wind power outputs prediction error (absolute average error) is about 9.6%, which means that the prediction accuracy of the proposed algorithm is high. A practical power system analysis was performed for the scenario in which electric vehicle charging is expected to be higher than the wind power generation due to the concentration of electric vehicle charging. The proposed algorithm can be used to analyze power system problems that may occur due to the concentration of electric vehicle charging demand in the future, and to prepare a method for decentralizing electric vehicle charging demand to establish a stable power system operation plan.
- Published
- 2021
- Full Text
- View/download PDF
24. Visual Thinking of Neural Networks: Interactive Text to Image Synthesis
- Author
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Hyunhee Lee, Gyeongmin Kim, Yuna Hur, and Heuiseok Lim
- Subjects
Generative adversarial networks ,image generation ,multimodal learning ,multimodal representation ,text-to-image synthesis ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Reasoning, a trait of cognitive intelligence, is regarded as a crucial ability that distinguishes humans from other species. However, neural networks now pose a challenge to this human ability. Text-to-image synthesis is a class of vision and linguistics, wherein the goal is to learn multimodal representations between the image and text features. Hence, it requires a high-level reasoning ability that understands the relationships between objects in the given text and generates high-quality images based on the understanding. Text-to-image translation can be termed as the visual thinking of neural networks. In this study, our model infers the complicated relationships between objects in the given text and generates the final image by leveraging the previous history. We define diverse novel adversarial loss functions and finally demonstrate the best one that elevates the reasoning ability of the text-to-image synthesis. Remarkably, most of our models possess their own reasoning ability. Quantitative and qualitative comparisons with several methods demonstrate the superiority of our approach.
- Published
- 2021
- Full Text
- View/download PDF
25. Probabilistic Estimation of Wind Generating Resources Based on the Spatio-Temporal Penetration Scenarios for Power Grid Expansions
- Author
-
Gyeongmin Kim, Hunyoung Shin, and Jin Hur
- Subjects
Probabilistic model and estimation ,wind generating resources ,spatiotemporal penetration scenarios ,Monte Carlo simulation ,power grid expansion ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
The proportion of renewable energy generation is expanding worldwide with the goal of reducing greenhouse gas. According to the 8th Basic Plan for Long-term Electricity Supply and Demand in South Korea, South Korea reduces traditional energy generation such as nuclear and coal plants and achieves 20% (58.5GW) of renewable energy generation by 2030. Wind Generating Resources (WGRs) are affected by meteorological variables such as temperature, wind speed and wind direction. Specifically, WGRs have uncertainty and variability issues depending on temporal and spatial characteristics. In this paper, we propose the probabilistic estimation of wind generating resources based on the spatiotemporal penetration scenarios for power grid expansion. The data of WGRs are analyzed based on clustering method considering the spatiotemporal penetration scenarios, and the potential scenarios are estimated using Monte Carlo simulation by selecting a representative power distribution probability for each cluster. The proposed estimation model of WGRs will play a key role to develop the hedging strategies of investment decision on power grid expansion planning with high wind power penetrations.
- Published
- 2021
- Full Text
- View/download PDF
26. The mitochondrial genome of a giant water bug Lethocerus deyrollei (Hemiptera: Belostomatidae) from South Korea
- Author
-
Eun Hwa Choi, Su Youn Baek, Ashraf Akintola, Bia Park, Jihye Hwang, Gyeongmin Kim, Cho Rong Shin, and Ui Wook Hwang
- Subjects
a giant water bug ,lethocerus deyrolli ,mitochondrial genome ,an endangered species ,south korea ,Genetics ,QH426-470 - Abstract
A giant water bug Lethocerus deyrollei (Hemiptera: Belostomatidae) is a large, predatory, and nocturnal hemipteran insect, which has been considered threatened and thus enrolled as an endangered species in South Korea and Japan. Here, we characterized the complete mitochondrial genome of L. deyrollei, which has a circular form with 19,295 bp in length, which is the longest when compared to those of the 111 hemipteran species reported so far. Its longest genome size is due to the extremely extended CR (4686 bp), which is much longer than those of China and Japan. It consisted of a total of 37 genes (13 PCGs, 22 tRNA genes, and two rRNA genes) and one control region (CR). The genome composition and gene order were identical to those previously reported from the same species of China and Japan with over 99.7% sequence similarities except for CR and trnI. The nucleotide composition was highly A + T biased, accounting for 71% of the whole mitochondrial genome, as in other species of Nepoidea. Based on the aa sequences of 13 PCGs, we reconstructed a maximum likelihood tree, which indicated that the three mitochondrial genomes of L. deyrollei from South Korea, China, and Japan are grouped, and also Lethocerus, Belostomatidae, Nepoidea, Nepomorpha, Heteroptra are strong monophyletic groups, respectively.
- Published
- 2021
- Full Text
- View/download PDF
27. The complete mitochondrial genome of the two-spotted cricket Gryllus bimaculatus (Orthoptera: Gryllidae) from South Korea
- Author
-
Bia Park, Eun Hwa Choi, Gyeongmin Kim, Cho Rong Shin, Jihye Hwang, Su Youn Baek, and Ui Wook Hwang
- Subjects
gryllidae ,gryllus bimaculatus ,mitochondrial genome ,molecular phylogeny ,Genetics ,QH426-470 - Abstract
The complete mitochondrial genome of a two-spotted cricket Gryllus bimaculatus (Orthoptera: Gryllidae) from South Korea is determined and characterized in this study. The circular genome is 16,075 bp long, which consists of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 22 transfer RNA genes, and an A + T−rich region. It has a base composition of A (40.35%), G (9.09%), C (16.80%), and T (33.76%). The gene order is identical to the ancestral gene arrangement pattern generally shown in arthropods, with the exception of an inversion of trnN-trnS1-trnE into trnE-trnS1-trnN. The maximum likelihood (ML) tree supports that G. bimaculatus is a distinct member of the monophyletic family Gryllidae.
- Published
- 2021
- Full Text
- View/download PDF
28. AI Student: A Machine Reading Comprehension System for the Korean College Scholastic Ability Test
- Author
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Gyeongmin Kim, Soomin Lee, Chanjun Park, and Jaechoon Jo
- Subjects
academic reading skills ,Korean College Scholastic Ability Test ,Korean CSAT question and answering ,machine reading comprehension ,Mathematics ,QA1-939 - Abstract
Machine reading comprehension is a question answering mechanism in which a machine reads, understands, and answers questions from a given text. These reasoning skills can be sufficiently grafted into the Korean College Scholastic Ability Test (CSAT) to bring about new scientific and educational advances. In this paper, we propose a novel Korean CSAT Question and Answering (KCQA) model and effectively utilize four easy data augmentation strategies with round trip translation to augment the insufficient data in the training dataset. To evaluate the effectiveness of KCQA, 30 students appeared for the test under conditions identical to the proposed model. Our qualitative and quantitative analysis along with experimental results revealed that KCQA achieved better performance than humans with a higher F1 score of 3.86.
- Published
- 2022
- Full Text
- View/download PDF
29. The complete mitochondrial genome of an Asian crested ibis Nipponia nippon (Pelecaniformes, Threskiornithidae) from South Korea
- Author
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Gyeongmin Kim, Kyu Cheol Jeong, Eun Hwa Choi, Shi Hyun Ryu, Young Jin Lim, Jumin Jun, Young-Sup Lee, and Ui Wook Hwang
- Subjects
nipponia nippon ,threskiornithidae ,mitochondrial genome ,asian crested ibis ,phylogenetic analysis ,Genetics ,QH426-470 - Abstract
The complete mitochondrial genome sequence from the Asian crested ibis, Nipponia nippon (Aves, Pelecaniformes, Threskiornithidae), was determined and characterized in detail. This mitochondrial genome is 16,813 bp long, and consists of 13 PCGs, 22 tRNAs, and 2 rRNAs. The nucleotide composition is slightly biased with A + T contents of 53.79% (A, T, C, and G was 30.37%, 23.42%, 31.99%, and 14.22%, respectively). 11 PCGs are initiated by ATN codons, except for cox1 and cox2 with GTG instead. The phylogenetic relationships based on the maximum-likelihood and Bayesian methods showed that the placement of N. nippon within the order Pelecaniformes, with forming the monoclade of the family Threskiornithidae.
- Published
- 2019
- Full Text
- View/download PDF
30. GREG: A Global Level Relation Extraction with Knowledge Graph Embedding
- Author
-
Kuekyeng Kim, Yuna Hur, Gyeongmin Kim, and Heuiseok Lim
- Subjects
relation extraction ,knowledge graph ,meta learning ,text summarization ,natural language processing ,machine learning ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
In an age overflowing with information, the task of converting unstructured data into structured data are a vital task of great need. Currently, most relation extraction modules are more focused on the extraction of local mention-level relations—usually from short volumes of text. However, in most cases, the most vital and important relations are those that are described in length and detail. In this research, we propose GREG: A Global level Relation Extractor model using knowledge graph embeddings for document-level inputs. The model uses vector representations of mention-level ‘local’ relation’s to construct knowledge graphs that can represent the input document. The knowledge graph is then used to predict global level relations from documents or large bodies of text. The proposed model is largely divided into two modules which are synchronized during their training. Thus, each of the model’s modules is designed to deal with local relations and global relations separately. This allows the model to avoid the problem of struggling against loss of information due to too much information crunched into smaller sized representations when attempting global level relation extraction. Through evaluation, we have shown that the proposed model yields high performances in both predicting global level relations and local level relations consistently.
- Published
- 2020
- Full Text
- View/download PDF
31. KoCHET: A Korean Cultural Heritage Corpus for Entity-related Tasks.
- Author
-
Gyeongmin Kim, Jinsung Kim, Junyoung Son, and Heuiseok Lim
- Published
- 2022
32. QUAK: A Synthetic Quality Estimation Dataset for Korean-English Neural Machine Translation.
- Author
-
Sugyeong Eo, Chanjun Park, Hyeonseok Moon, Jaehyung Seo, Gyeongmin Kim, Jungseob Lee, and Heuiseok Lim
- Published
- 2022
33. DynaCon: Dynamic Robot Planner with Contextual Awareness via LLMs.
- Author
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Gyeongmin Kim, Taehyeon Kim, Shyam Sundar Kannan, Vishnunandan L. N. Venkatesh, Donghan Kim 0001, and Byung-Cheol Min
- Published
- 2023
- Full Text
- View/download PDF
34. BIRP: Bitcoin Information Retrieval Prediction Model Based on Multimodal Pattern Matching.
- Author
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Minsuk Kim, Byungchul Kim, Junyeong Yong, Jeongwoo Park, and Gyeongmin Kim
- Published
- 2023
- Full Text
- View/download PDF
35. Automatic extraction of named entities of cyber threats using a deep Bi-LSTM-CRF network.
- Author
-
Gyeongmin Kim, Chanhee Lee, Jaechoon Jo, and Heuiseok Lim
- Published
- 2020
- Full Text
- View/download PDF
36. A Comparative Analysis of Emotional Words for Learning Effectiveness in Online Education.
- Author
-
Jaechoon Jo, YeongWook Yang, Gyeongmin Kim, and Heuiseok Lim
- Published
- 2019
37. In Vitro Generation of Luminal Vasculature in Liver Organoids: From Basic Vascular Biology to Vascularized Hepatic Organoids
- Author
-
Hyo Jin Kim, Gyeongmin Kim, Kyun Yoo Chi, and Jong-Hoon Kim
- Subjects
Cell Biology ,Developmental Biology - Published
- 2022
- Full Text
- View/download PDF
38. 'A Study on the Life History of Fatherhood in Middle-aged Men Who Grew up in a Single-parent Family of Mothers'
- Author
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Gyeongmin Kim and Jian Noh
- Published
- 2022
- Full Text
- View/download PDF
39. Subtle metal(<scp>ii</scp>) effects of 2D coordination networks on SCSC guest exchange
- Author
-
Gyeongwoo Kim, Gyeongmin Kim, Dongwon Kim, and Ok-Sang Jung
- Subjects
General Materials Science ,General Chemistry ,Condensed Matter Physics - Abstract
The multi-channel crystals consisting of 2-D networks G@[M(NO3)2L] are an unusually efficient, tolerant, and reproducible matrix offering M-dependent adsorption/desorption of various guest molecules in the single-crystal-to-single-crystal mode.
- Published
- 2022
- Full Text
- View/download PDF
40. MACHINE LEARNING-BASED DECISION TREE ANALYSIS TO FACILITATE ADOPTION OF ABANDONED DOGS.
- Author
-
GYEONGMIN KIM, MINJEONG JO, JUNGWOON KANG, WOOHYEOK JUNG, and MINCHEOL KIM
- Subjects
DECISION trees ,MACHINE learning ,ARTIFICIAL intelligence ,ARTIFICIAL neural networks ,DATA augmentation - Published
- 2024
- Full Text
- View/download PDF
41. A DEEP LEARNING-BASED TANGERINE PEELS PEST IMAGE CLASSIFICATION SYSTEM FOR INCREASING TANGERINE SHELL PRODUCTIVITY.
- Author
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JUNGWOON KANG, PRADIP GUBHAJU, GYEONGMIN KIM, MINJEONG JO, CHANGSAN BOO, and MINCHEOL KIM
- Subjects
DEEP learning ,IMAGE recognition (Computer vision) ,PESTS ,BIOECONOMICS ,NAVIGATION - Published
- 2024
- Full Text
- View/download PDF
42. Probabilistic Security Analysis based on Renewable Energy Scenario Modeling
- Author
-
Solyoung Jung, Jaegul Lee, Seungchan Oh, Hunyoung Shin, Gyeongmin Kim, and Jin Hur
- Subjects
Security analysis ,business.industry ,Computer science ,Probabilistic logic ,Electrical and Electronic Engineering ,Environmental economics ,business ,Renewable energy - Published
- 2021
- Full Text
- View/download PDF
43. Comparative evaluation of three different formulas for predicting the parturition date of German Shepherds following somatic cell nuclear transfer
- Author
-
Young-Bum Son, Yeon Woo Jeong, Yeon Ik Jeong, Mohammad Shamim Hossein, Woo Suk Hwang, Per Olof Olsson, and Gyeongmin Kim
- Subjects
General Veterinary ,Full Paper ,business.industry ,parturition date ,Parturition ,German Shepherd ,Gestational Age ,ultrasonography ,Chorion ,Biology ,Ultrasonography, Prenatal ,Comparative evaluation ,Theriogenoloy ,Andrology ,Dogs ,Fetus ,Pregnancy ,Somatic cell nuclear transfer ,Animals ,Female ,Ultrasonography ,dog cloning ,business - Abstract
Several studies have reported methods to estimate the parturition date of dogs using ultrasonographic measurements. However, these prediction models were mainly determined using ultrasonographic measurements of naturally pregnant small- and medium-sized dogs, and no such studies have been performed using dogs carrying cloned fetuses produced via somatic cell nuclear transfer. The present study evaluated the abilities of three reference formulas (Luvoni and Grioni, Milani et al., and Groppetti et al.), all of which were developed using data from naturally occurring pregnancies, to accurately predict the parturition date in surrogates carrying cloned German Shepherd (GS) fetuses. All three formulas were based on the use of inner chorionic cavity diameter (ICC) measurements, obtained via ultrasonography. For evaluation, a total of 54 ICC measurements were collected from 14 pregnant bitches carrying cloned GS fetuses. We found that the clinical accuracy of the breed-specific Groppetti et al. formula was highest among those of the three formulas tested, with 87% and 100% of the estimated parturition dates (calculated based on the ICC measurements) being within 1 and 2 days, respectively, of the actual delivery date. By contrast, the Luvoni and Grioni formula showed relatively low accuracy, and the Milani et al. formula showed higher accuracy than that reported previously for natural pregnancies.
- Published
- 2021
44. Validation of the Korean Version of the Psychosis Screener to Identify Patients With Psychosis
- Author
-
Jangrae Kim, Gyeongmin Kim, Hyunsuk Jeong, Hanseul Kwon, Anna Waterreus, So Hee Lee, Seung-Yup Lee, and Hyeon Woo Yim
- Subjects
Psychosis ,medicine.medical_specialty ,Area under the curve ,business.industry ,Medical record ,Gold standard ,Psychosis screener ,medicine.disease ,Mental health ,Psychiatry and Mental health ,Sensitivity ,Validation ,medicine ,Specificity ,Screening tool ,Original Article ,Medical diagnosis ,business ,Psychiatry ,Biological Psychiatry ,Korean version - Abstract
Objective This study aimed to validate the Korean version of a short screening tool for psychosis as the first stage in finding undiagnosed psychosis in the community.Methods The sample contained 126 consecutive psychiatric outpatients in National Medical Center, Seoul, Korea, between July 20 and July 22, 2020. The Psychosis Screener (PS) comprises 7 items covering psychotic symptoms. The presence of each psychotic symptom was determined by a trained mental health professional and coded “yes” or “no.” Two psychiatrists reviewed the medical records independently and extracted the ICD-10-based diagnoses. Any differences between the two clinicians were resolved by consensus, and the agreed diagnosis was used as a gold standard in the study.Results Among 126 psychiatric outpatients who were enrolled in a consecutive manner during the study period, the proportion of psychosis was 15.1%. The PS showed 78.9% sensitivity and 72.0% specificity when the optimal cut-off was 2, indicating that a score of 2 or more on the screener identified a likely case of psychosis. The area under the curve for the PS was 0.78 (95% CI: 0.67–0.87).Conclusion The Korean version of the PS has an ability to discriminate between those who meet the diagnostic criteria for psychosis and those who do not in a high-prevalence group.
- Published
- 2021
45. Methodology for Security Analysis of Grid- Connected Electric Vehicle Charging Station With Wind Generating Resources
- Author
-
Jin Hur and Gyeongmin Kim
- Subjects
business.product_category ,General Computer Science ,020209 energy ,charging demand ,Wind power forecasting ,02 engineering and technology ,Electric vehicle ,Automotive engineering ,Charging station ,Electric power system ,wind generating resources ,Variable renewable energy ,wind power forecasting ,0202 electrical engineering, electronic engineering, information engineering ,General Materials Science ,security analysis ,Wind power ,business.industry ,020208 electrical & electronic engineering ,General Engineering ,Renewable energy ,TK1-9971 ,Electricity generation ,Environmental science ,charging station ,Electrical engineering. Electronics. Nuclear engineering ,business - Abstract
The project Carbon-Free Island Jeju by 2030 promoted by the Republic of Korea aims to expand the renewable energy sources centered on wind power in Jeju Island and supply electric vehicles for eco-friendly mobility. However, the increased penetration rate of electric vehicles and expansion of variable renewable energy sources can accelerate the power demand and uncertainty in the power generation output. In this paper, power system analysis is performed through electric vehicle charging demand and wind power outputs prediction, and an electric vehicle charging decentralization algorithm is proposed to mitigate system congestion. In order to predict electric vehicle charging demand, the measurement data were analyzed, and random sampling was performed by applying the weight of charging frequency for each season and time. In addition, wind power outputs prediction was performed using the ARIMAX model. Input variables are wind power measurement data and additional explanatory variables (wind speed). Wind power outputs prediction error (absolute average error) is about 9.6%, which means that the prediction accuracy of the proposed algorithm is high. A practical power system analysis was performed for the scenario in which electric vehicle charging is expected to be higher than the wind power generation due to the concentration of electric vehicle charging. The proposed algorithm can be used to analyze power system problems that may occur due to the concentration of electric vehicle charging demand in the future, and to prepare a method for decentralizing electric vehicle charging demand to establish a stable power system operation plan.
- Published
- 2021
46. Enhancing Korean Named Entity Recognition With Linguistic Tokenization Strategies
- Author
-
Junyoung Son, Jinsung Kim, Gyeongmin Kim, Heuiseok Lim, and Hyunhee Lee
- Subjects
Agglutinative language ,General Computer Science ,Computer science ,Lexical analysis ,General Engineering ,linguistic segmentation ,Semantics ,computer.software_genre ,tokenization ,Linguistics ,TK1-9971 ,Named entity recognition ,Named-entity recognition ,Morpheme ,Task analysis ,General Materials Science ,Electrical engineering. Electronics. Nuclear engineering ,Language model ,natural language processing ,Syllable ,Korean pre-trained language model ,computer ,agglutinative language - Abstract
Tokenization is a significant primary step for the training of the Pre-trained Language Model (PLM), which alleviates the challenging Out-of-Vocabulary problem in the area of Natural Language Processing. As tokenization strategies can change linguistic understanding, it is essential to consider the composition of input features based on the characteristics of the language for model performance. This study answers the question of “Which tokenization strategy enhances the characteristics of the Korean language for the Named Entity Recognition (NER) task based on a language model?” focusing on tokenization, which significantly affects the quality of input features. We present two significant challenges for the NER task with the agglutinative characteristics in the Korean language. Next, we quantitatively and qualitatively analyze the coping process of each tokenization strategy for these challenges. By adopting various linguistic segmentation such as morpheme, syllable and subcharacter, we demonstrate the effectiveness and prove the performance between PLMs based on each tokenization strategy. We validate that the most consistent strategy for the challenges of the Korean language is a syllable based on Sentencepiece.
- Published
- 2021
- Full Text
- View/download PDF
47. Molecular phylogenetic, population genetic and demographic studies of Nodularia douglasiae and Nodularia breviconcha based on CO1 and 16S rRNA
- Author
-
Shi Hyun Ryu, Ho Young Suk, Ui Wook Hwang, Su Youn Baek, Young Sup Lee, Jun-Sang Lee, Eun Hwa Choi, Seung Hyun Cha, and Gyeongmin Kim
- Subjects
0106 biological sciences ,0301 basic medicine ,Unionidae ,Demographic history ,Evolution ,Population ,Zoology ,lcsh:Medicine ,Subspecies ,010603 evolutionary biology ,01 natural sciences ,Article ,Russia ,03 medical and health sciences ,Species Specificity ,Genus ,RNA, Ribosomal, 16S ,Genetics ,Animals ,education ,Clade ,lcsh:Science ,Phylogeny ,Nodularia ,education.field_of_study ,Multidisciplinary ,biology ,Phylogenetic tree ,Base Sequence ,Asia, Eastern ,lcsh:R ,biology.organism_classification ,030104 developmental biology ,Genetics, Population ,lcsh:Q - Abstract
Freshwater mussels belonging to the genus Nodularia (Family Unionidae) are known to be widely distributed in East Asia. Although phylogenetic and population genetic studies have been performed for these species, there still remain unresolved questions in their taxonomic status and biogeographic distribution pathways. Here, the nucleotide sequences of CO1 and 16S rRNA were newly determined from 86 N. douglasiae and 83 N. breviconcha individuals collected on the Korean Peninsula. Based on these data, we revealed the following results: (1) N. douglasiae can be divided into the three genetic clades of A (only found in Korean Peninsula), B (widely distributed in East Asia), and C (only found in the west of China and Russia), (2) the clade A is not an independent species but a concrete member of N. douglasiae given the lack of genetic differences between the clades A and B, and (3) N. breviconcha is not a subspecies of N. douglasiae but an independent species apart from N. douglasiae. In addition, we suggested the plausible scenarios of biogeographic distribution events and demographic history of Nodularia species.
- Published
- 2020
- Full Text
- View/download PDF
48. The Effectiveness and Side Effects of Conscious Sedation using Chloral hydrate, Hydroxyzine, and Nitrous oxide
- Author
-
Soon-Hyeun Nam, Gyeongmin Kim, Hyun Jung Kim, and Jaesik Lee
- Subjects
Hydroxyzine ,business.industry ,Sedation ,Chloral hydrate ,Nitrous oxide ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,Anesthesia ,medicine ,030212 general & internal medicine ,medicine.symptom ,business ,030217 neurology & neurosurgery ,medicine.drug - Abstract
This retrospective study assessed the effectiveness and side effects of conscious sedation using chloral hydrate, hydroxyzine, and N2O/O2 in the sedation of 149 pediatric patients over 188 sedation sessions, and to identify associated variables.The effectiveness of the sedation was evaluated using the Houpt scale, and was considered effective for scale categories of excellent or good. Effectiveness and side effects were assessed every 15 minutes. The effectiveness decreased and side effects increased over time. The effectiveness of sedation during 60 minutes was 57.4%, and one or more side effects occurred in 18.1% of sessions. Effectiveness of sedation increased with body mass index (BMI). When patients were sedated at the beginning of the procedure, the effectiveness was greater. Side effects increased with patient age. When sedation was divided into two sessions, the number of sedation did not affect the effectiveness or side effects.It can be suggested that sedation should be performed over two separate sessions, as a single prolonged session may lead to reduced effectiveness and increased side effects. To maximize effectiveness and minimize side effects, several variables such as BMI, whether to sedate at the beginning of the procedure and age should be considered thoroughly before sedation.
- Published
- 2020
- Full Text
- View/download PDF
49. How is the ‘Invisible Hand’ Working at the Level of Human Nature? -Seeking an Answer by Comparing the Theories of Human Nature of Smith and Butler
- Author
-
Gyeongmin Kim
- Subjects
Invisible hand ,Building and Construction ,Sociology ,Epistemology - Published
- 2020
- Full Text
- View/download PDF
50. Sentiment-Target Word Pair Extraction Model Using Statistical Analysis of Sentence Structures
- Author
-
Jaechoon Jo, Gyeongmin Kim, and Kinam Park
- Subjects
TK7800-8360 ,Computer Networks and Communications ,Hardware and Architecture ,Control and Systems Engineering ,Signal Processing ,statistical model ,opinion mining ,parser ,data mining ,word extraction ,Electrical and Electronic Engineering ,Electronics - Abstract
Product information has been propagated online via forums and social media. Lots of merchandise are recommended via an expert system method and is considered for purchase by online comments or product reviews. For predicting people’s opinions on products, studying people’s thoughts via extracting information in documents is referred to as sentiment analysis. Finding sentiment-target word pairs is an important sentiment mining research issue. With the Korean language, as the predicate appears at the very end, it is not easy to find the exact word pairs without first identifying the syntactic structure of the sentence. In this study, we propose a model that parses sentence structures and extracts sentiment-target word pairs from the parse tree. The proposed model extracts the sentiment-target word pairs that appear in the sentence by using parsing and statistical methods. For extracting sentiment-target word pairs, this model uses a sentiment word extractor and a target word extractor. After testing data from 4000 movie reviews, the applicable model showed high performance in both accuracy 93.25 (+14.45) and F1-score 82.29 (+3.31) compared with others. However, improvements in the recall rate (−0.35) are needed and computational costs must be reduced.
- Published
- 2021
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