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4. Democratising Knowledge Representation with BioCypher

5. NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange

6. Unifying the identification of biomedical entities with the Bioregistry

7. A Unified Framework for Rank-based Evaluation Metrics for Link Prediction in Knowledge Graphs

8. ChemicalX: A Deep Learning Library for Drug Pair Scoring

9. A roadmap for the functional annotation of protein families: a community perspective

10. A Simple Standard for Sharing Ontological Mappings (SSSOM)

11. A Simple Standard for Sharing Ontological Mappings (SSSOM)

12. Democratizing knowledge representation with BioCypher

14. Statistical Model Checking based Analysis of Biological Networks

15. Encoding Growth Factor Identity in the Temporal Dynamics of FOXO3 under the Combinatorial Control of ERK and AKT Kinases

17. Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches

18. Eliater: a Python package for estimating outcomes of perturbations in biomolecular networks.

19. Statistical Model Checking-Based Analysis of Biological Networks

20. Approximate probabilistic verification of hybrid systems

21. Probabilistic verification of partially observable dynamical systems

22. Hypothesis testing for Markov chain Monte Carlo

23. Erratum To: COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms

25. COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms

26. Non-asymptotic confidence intervals for MCMC in practice

28. Automated Network Assembly of Mechanistic Literature for Informed Evidence Identification to Support Cancer Risk Assessment

29. Parallelized Parameter Estimation of Biological Pathway Models

30. Approximate Probabilistic Verification of Hybrid Systems

31. A Simple Standard for Ontological Mappings 2023: Updates on data model, collaborations and tooling

32. Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches

35. Statistical Model Checking Based Calibration and Analysis of Bio-pathway Models

41. ChemicalX: A Deep Learning Library for Drug Pair Scoring

42. Unifying the Identification of Biomedical Entities with the Bioregistry

43. Automated Network Assembly of Mechanistic Literature for Informed Evidence Identification to Support Cancer Risk Assessment

44. ProtSTonKGs: A Sophisticated Transformer Trained on Protein Sequences, Text, and Knowledge Graphs

45. STonKGs: A Sophisticated Transformer Trained on Biomedical Text and Knowledge Graphs

50. A Simple Standard for Sharing Ontological Mappings (SSSOM)

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