639 results on '"Hideaki Kasai"'
Search Results
2. Ru-Catalyzed Steam Methane Reforming: Mechanistic Study from First Principles Calculations
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Ryan Lacdao Arevalo, Susan Meñez Aspera, Mary Clare Sison Escaño, Hiroshi Nakanishi, and Hideaki Kasai
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Chemistry ,QD1-999 - Published
- 2017
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3. Immobilization of Amino Acids Leucine and Glycine on Polypyrrole for Biosensor Applications: A Density Functional Theory Study
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Hermawan K. Dipojono, Irna Safitri, Nugraha Nugraha, Eko Mursito Budi, Nuryanti Nuryanti, Adhitya G. Saputro, Melanie Y. David, and Hideaki Kasai
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Science ,Science (General) ,Q1-390 - Abstract
Adsorption based on the immobilization of amino acids, i.e. leucine and glycine, on the surface of undoped polypyrrole (Ppy) is investigated. Calculations are done based on density functional theory using Gaussian03 software and applying GGA with 6-31G(d) basis set and exchange-correlation model of PBE (Perdew, Burke, Ernzerhof) level of theory. The energy of the Ppy doped with amino acids are minimized with respect to the orientation and distance of the amino acids to the Ppy. Neutral leucine carboxyl shows greater binding energy as compared to that other leucine configurations. It has adsorption energy of 0.25 eV at optimum distance of 2.2 Ã… from the surface of Ppy. As for the glycine, the zwitterionic carboxyl exhibits the strongest binding energy among other glycine configurations. It has adsorption energy of 0.76 eV at optimum distance of 1.7 Ã… from the surface of Ppy. The adsorption processes for both amino acids should proceed easily because the activation barriers are either absent or very small.
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- 2013
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4. 211At on gold nanoparticles for targeted radionuclide therapy application.
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Tanudji, Jeffrey, Hideaki Kasai, Michio Okada, Tetsuo Ogawa, Aspera, Susan M., and Hiroshi Nakanishi
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Targeted alpha therapy (TAT) is a methodology that is being developed as a promising cancer treatment using the a-particle decay of radionuclides. This technique involves the use of heavy radioactive elements being placed near the cancer target area to cause maximum damage to the cancer cells while minimizing the damage to healthy cells. Using gold nanoparticles (AuNPs) as carriers, a more effective therapy methodology may be realized. AuNPs can be good candidates for transporting these radionuclides to the vicinity of the cancer cells since they can be labeled not just with the radionuclides, but also a host of other proteins and ligands to target these cells and serve as additional treatment options. Research has shown that astatine and iodine are capable of adsorbing onto the surface of gold, creating a covalent bond that is quite stable for use in experiments. However, there are still many challenges that lie ahead in this area, whether they be theoretical, experimental, and even in real-life applications. This review will cover some of the major developments, as well as the current state of technology, and the problems that need to be tackled as this research topic moves along to maturity. The hope is that with more workers joining the field, we can make a positive impact on society, in addition to bringing improvement and more knowledge to science. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Computational Nanomaterials Design: towards the Realization of Nanoparticle use in Radiotherapy Case Study 2: Adsorption states of At on Au (111) Surface
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Hiroshi Nakanishi, Tetsuo Ogawa, Michio Okada, Hideaki Kasai, Susan Meñez Aspera, and Jeffrey Tanudji
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General Materials Science - Abstract
Astatine-211 (211At or simply At) used as an α particle emitter is currently gaining as treatment method for cancer cells. It must however be attached to a carrier to facilitate the treatment process. Gold nanoparticle is a good candidate that has been used in several tests. Knowing the physics behind the adsorption of astatine on gold nanoparticles would be advantageous in designing a more optimal method for such applications. We therefore performed density functional theory calculation on astatine adsorption on gold (111) surface to understand both the mechanism of astatine bonding with gold and the strength of the bonding. We found the mechanism of adsorption to be the hybridization between the 6p orbital of astatine and the 5d and 6s orbitals of the gold. We also found the adsorption strength of astatine on gold to be -1.43 eV at the fcc hollow site. Both results provide us with a good starting point towards our goal of designing an optimized gold nanoparticle for radiotherapy.
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- 2022
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6. Theoretical Comparison Study of Iodine and Astatine Adsorption on Au(111) Surface
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Jeffrey Tanudji, Susan Meñez Aspera, and Hideaki Kasai
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Mechanics of Materials ,Bioengineering ,Surfaces and Interfaces ,Condensed Matter Physics ,Surfaces, Coatings and Films ,Biotechnology - Published
- 2023
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7. Computational Nanomaterial Design: Towards the Realization of Nanoparticle Design in Cancer Treatment
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Hideaki Kasai
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General Medicine - Published
- 2022
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8. Integration of user interface design process.
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Naotake Hirasawa, Shinya Ogata, Kiko Yamada-Kawai, and Hideaki Kasai
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- 2010
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9. Micro-Scenario Database for Substantializing the Collaboration Between Human Science and Engineering.
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Masaaki Kurosu, Kentaro Go, Naoki Hirasawa, and Hideaki Kasai
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- 2007
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10. Understanding Requirements of Ubiquitous Application in Context of Daily Life.
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Naotake Hirasawa, Tomonori Shibagaki, and Hideaki Kasai
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- 2007
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11. Computational Investigation on the ∙OOH Scavenging Sites of Gnetin C
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Lusia S. P. Boli, Heni Rachmawati, Vera Khoirunisa, Hiroshi Nakanishi, Febdian Rusydi, Hideaki Kasai, Hermawan Kresno Dipojono, and Adhitya Gandaryus Saputro
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0303 health sciences ,Antioxidant ,030309 nutrition & dietetics ,Chemistry ,Stereochemistry ,medicine.medical_treatment ,Dimer ,Biophysics ,Bioengineering ,04 agricultural and veterinary sciences ,Resveratrol ,Ring (chemistry) ,040401 food science ,Applied Microbiology and Biotechnology ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Monomer ,Hydroperoxyl ,Furan ,medicine ,Scavenging ,Food Science - Abstract
Melinjo seed extract contains melinjo resveratrol compounds that has antioxidant activity. The radical-scavenging sites required for the antioxidant activity, however, is yet to be located. We report a computational study that aims to locate scavenging sites of the simplest resveratrol dimer, gnetin C. We consider the reaction of gnetin C and hydroperoxyl radical energetically with the basis of density-functional calculations, to be compared with the reaction of the resveratrol monomer, trans-resveratrol, and hydroperoxyl radical. The results show that OH group at the para position is the most reactive scavenging site for both molecules. Besides the OH group, gnetin C also provides two CH groups in the furan ring that are favorable as scavenging sites. Therefore, furan ring plays an important role in the scavenging activity, which is contrary to the experimental speculation that propose resorcinol ring. Our study shows the prospect of density-functional calculation for studying the radical-scavenging reaction.
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- 2021
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12. Theoretical Study of an almost Barrier-Free Water Dissociation on a Platinum (111) Surface Alloyed with Ruthenium and Molybdenum
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Siti Zulaehah, Mukhtar Effendi, Wahyu Tri Cahyanto, Wahyu Widanarto, Farzand Abdullatif, and Hideaki Kasai
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Materials science ,General Chemical Engineering ,chemistry.chemical_element ,General Chemistry ,Dissociation (chemistry) ,Article ,Catalysis ,Ruthenium ,Metal ,Chemistry ,chemistry ,Molybdenum ,visual_art ,Density of states ,visual_art.visual_art_medium ,Physical chemistry ,Density functional theory ,Platinum ,QD1-999 - Abstract
A theoretical study based on density functional theory for H2O dissociation on the metal surface of Pt(111) alloyed simultaneously with Ru and Mo was performed. The determination of the minimum energy path using the climbing image nudged elastic band (CI-NEB) method shows that the dissociation reaction of H2O with this catalyst requires almost no energy cost. This dissociation reaction is not only kinetically favored but also almost thermodynamically neutral and somewhat exothermic. The electronic structure analysis showed that much more charge was released in Mo and was used to bind the adsorbed hydroxyl (OHad). Further analyses of the density of states (DOS) showed that the large number of orbitals that overlap when OH binds to Mo are responsible for the stabilization of the OH-surface bond. The stability of the OHad fragment on the surface is believed to be a descriptor for the dissociation of H2O with an almost spontaneous process.
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- 2021
13. PdRuIr ternary alloy as an effective NO reduction catalyst: insights from first-principles calculation
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Ryan Lacdao Arevalo, Bhume Chantaramolee, Hideaki Kasai, Susan Meñez Aspera, and Hiroshi Nakanishi
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Molecular diffusion ,Materials science ,biology ,Reaction step ,General Physics and Astronomy ,Active site ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Dissociation (chemistry) ,0104 chemical sciences ,Catalysis ,Metal ,Adsorption ,visual_art ,biology.protein ,visual_art.visual_art_medium ,Physical chemistry ,Density functional theory ,Physical and Theoretical Chemistry ,0210 nano-technology - Abstract
NO dissociation is an important reaction step in the NO reduction reaction, particularly in the three-way catalyst conversion system for automotive gas exhaust purification. In this study, we used first-principles calculations based on density functional theory to analyze the interaction and dissociation of NO on the PdRuIr ternary alloy. The electronic properties of the atomic combination of the PdRuIr ternary alloy create an effective catalyst that is active for NO dissociation and relatively stable against the formation of volatile RuOx through a weakened O adsorption. This study also shows that for an alloyed system, the strength of NO adsorption may not necessarily predict the dissociation activity. This tendency is observed in the PdRuIr ternary alloy where Ru top is the active site for NO adsorption albeit not an effective site for dissociation. It is presumed that NO dissociation is mediated by its molecular diffusion to active sites for dissociation, which are usually high Ru- and/or Ir-coordinated hollow or bridge sites. These active sites allow high charge transfer from the surface to NO, which fills the NO anti-bonding state and facilitates dissociation. This therefore assumes that the strength of NO molecular adsorption is not a descriptor for NO dissociation on metal alloys but rather the ability of the surface to transfer charge to NO and homogeneity of the strength of adsorption. Furthermore, O adsorption on the ternary alloy, particularly near the Ru sites, is relatively weaker as compared to the pure Ru surface. This weakened O adsorption is attributed to charge re-distribution through alloying, particularly charge transfer from the Ru atom to the Ir and Pd atoms.
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- 2021
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14. Dynamical Quantum Filtering via Enhanced Scattering of para-H2 on the Orientationally Anisotropic Potential of SrTiO3(001)
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Kotaro Takeyasu, Koji Shimizu, Hideaki Kasai, Wilson Agerico Diño, Hiroshi Nakanishi, Ayako Yajima, and Katsuyuki Fukutani
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Surface (mathematics) ,Physics ,Multidisciplinary ,Scattering ,Quantum dynamics ,lcsh:R ,Ionic bonding ,lcsh:Medicine ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Molecular physics ,0103 physical sciences ,Quadrupole ,Density functional theory ,lcsh:Q ,010306 general physics ,0210 nano-technology ,Anisotropy ,lcsh:Science ,Electric field gradient - Abstract
Quantum dynamics calculation, performed on top of density functional theory (DFT)-based total energy calculations, show dynamical quantum filtering via enhanced scattering of para-H2 on SrTiO3(001). We attribute this to the strongly orientation-dependent (electrostatic) interaction potential between the H2 (induced) quadrupole moment and the surface electric field gradient of ionic SrTiO3(001). These results suggest that ionic surfaces could function as a scattering/filtering media to realize rotationally state-resolved H2. This could find significant applications not only in H2 storage and transport, but also in realizing materials with pre-determined characteristic properties.
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- 2020
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15. A First-Principles Study of the Adsorption of H2O on Ru- and Mo-Alloyed Pt(111) Surfaces
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Wahyu Widanarto, Wahyu Tri Cahyanto, Hideaki Kasai, Siti Zulaehah, Farzand Abdullatif, and Mukhtar Effendi
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010302 applied physics ,Materials science ,Hydrogen ,Binding energy ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Electronic, Optical and Magnetic Materials ,Electronegativity ,Metal ,Adsorption ,chemistry ,visual_art ,0103 physical sciences ,Materials Chemistry ,visual_art.visual_art_medium ,Physical chemistry ,Density functional theory ,Electrical and Electronic Engineering ,0210 nano-technology ,Ternary operation ,HOMO/LUMO - Abstract
A study on the molecular adsorption of a water (H2O) monomer on Pt alloy surfaces with binary Pt-Ru and Pt-Mo and ternary Pt-Ru-Mo surface models was conducted. Some calculations of the interaction between a H2O monomer and the Pt surface were also done for reference. This study is based on density functional theory (DFT) with periodic models and aims to understand the H2O adsorption mechanism. In Pt, Pt-Ru, and Pt-Mo surfaces, H2O preferably adsorbs via an oxygen atom in a flat configuration at the top sites of Pt, Ru, Mo, respectively. However, on the ternary Pt-Ru-Mo surface, the adsorption configuration has the most inclined H2O structure relative to the surface. The results showed that the binding energy of H2O/Pt-Ru-Mo > H2O/Pt-Mo > H2O/Pt-Ru > H2O/Pt. The adsorption mechanism was then clarified by charge transfer and natural bonding. The charge transfer from the surface to the adsorbate is observed in all models, with the greatest charge transfer occurring on the surface of Pt doped with two Mo atoms. This is probably due to the fact that oxygen can attract the most charge on Mo, because the difference in electronegativity is greatest. The calculation results also show that Ru is the most hydrophilic metal for oxygen. However, since the adsorption structure is parallel to the surface, hydrogen (H) is also more sensitive to receive the charge. Subsequently, the most acceptable reason for the most stable adsorption for H2O/Pt-Ru-Mo is that the inclined structure yields the most orbitals hybridization at the H2O's highest occupied molecular orbital (HOMO). This drives the interaction by forming bonding states at the lowest energy and anti-bonding states at the highest energy.
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- 2020
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16. Adsorption of CH4 and SO2 on Unsupported Pd1−xMxO(101) Surface
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Hiroshi Nakanishi, Susan Meñez Aspera, R. E. S. Otadoy, Ryan Lacdao Arevalo, and Hideaki Kasai
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010405 organic chemistry ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,Methane ,0104 chemical sciences ,Metal ,chemistry.chemical_compound ,Adsorption ,Transition metal ,chemistry ,Chemical engineering ,Impurity ,visual_art ,Anaerobic oxidation of methane ,visual_art.visual_art_medium ,Organometallic chemistry - Abstract
PdO is known to efficiently catalyze the oxidation of methane but suffers tremendously from sulfur poisoning that lowers its catalytic activity. In this paper, dispersion-corrected density functional theory based first principles calculations were performed to systematically screen the metal impurities M (where M is a transition metal) on a Pd1−xMxO catalyst that promote the desired adsorption energies for CH4 and SO2 to gain insights into the design of sulfation-resistant PdO-based methane oxidation catalysts. Specific Pd1−xMxO(101) catalyst was identified to thermodynamically avoid surface sulfation while maintaining the active sites for methane activation at typical experimental conditions. Results indicate a potential route of tuning the catalytic property of PdO by the introduction of a surface metal impurity.
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- 2020
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17. Surface facet dependence of Ru and Ru-based alloy oxidation resistance using ab initio thermodynamics calculation
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Susan Meñez Aspera, Elvis Flaviano Arguelles, Ryan Lacdao Arevalo, Bhume Chantaramolee, Hiroshi Nakanishi, and Hideaki Kasai
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Materials Chemistry ,Surfaces and Interfaces ,Condensed Matter Physics ,Surfaces, Coatings and Films - Published
- 2022
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18. Theoretical study of CO2 hydrogenation to methanol on isolated small Pd clusters
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Adhitya Gandaryus Saputro, Hermawan Kresno Dipojono, Mochamad R. Pradana, Arifin Luthfi Maulana, Mohammad Kemal Agusta, Muhammad U. Karami, Hideaki Kasai, and Refaldi Intri Dwi Putra
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Energy Engineering and Power Technology ,Water gas ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Dissociation (chemistry) ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,Crystallography ,Fuel Technology ,chemistry ,Electrochemistry ,Cluster (physics) ,Molecule ,Density functional theory ,Formate ,Methanol ,0210 nano-technology ,Energy (miscellaneous) - Abstract
CO2 hydrogenation to methanol on small size Pdx clusters (x = 7, 9 and 13) has been studied using density functional theory calculations. It has been found that in contrast to metallic Pd system, these small Pdx clusters can interact well with CO2 molecule. CO2 molecule can be adsorbed with a bidendate configuration on the Pdx clusters. The formation of CO2 bidendate adsorption configuration facilitates the first step of CO2 hydrogenation reaction on the clusters. The energy profiles for formate pathway and reverse water gas shift + CO hydrogenation pathways on Pdx clusters are quite similar with Cu(111) surface, except for the first and last hydrogenation steps where the Pdx clusters have lower activation energies. This improvement causing the Pdx clusters to have a tolerable turn over frequencies values. In general, the usage of Pd in the form of small size cluster can improve the catalytic performance of metallic Pd for the CO2 hydrogenation to methanol because small size Pd cluster can act not only as an H2 dissociation center but also as a CO2 hydrogenation center.
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- 2019
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19. Investigation of reverse ionic diffusion in forward-osmosis-aided dewatering of microalgae: A molecular dynamics study
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Jester N. Itliong, Joaquin Lorenzo Valmoria Moreno, Nelson B. Arboleda, Kurt Irvin M. Rojas, Allan Abraham B. Padama, Alvin B. Culaba, Robby B. Manrique, Al Rey Villagracia, Aristotle T. Ubando, Gian Paolo O. Bernardo, Jo Shu Chang, Hui Lin Ong, Hideaki Kasai, Wei Hsin Chen, and Melanie David
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0106 biological sciences ,Osmosis ,Environmental Engineering ,Diffusion ,Forward osmosis ,Ionic bonding ,Bioengineering ,Molecular Dynamics Simulation ,Sodium Chloride ,010501 environmental sciences ,01 natural sciences ,Permeability ,Ion ,Molecular dynamics ,010608 biotechnology ,Microalgae ,Waste Management and Disposal ,0105 earth and related environmental sciences ,Ions ,Renewable Energy, Sustainability and the Environment ,Chemistry ,Water ,General Medicine ,Dewatering ,Membrane ,Chemical engineering ,Permeability (electromagnetism) - Abstract
This study aimed to investigate the transport mechanisms of ions during forward-osmosis-driven (FO-driven) dewatering of microalgae using molecular dynamics (MD) simulations. The dynamical and structural properties of ions in FO systems of varying NaCl or MgCl2 draw solution (DS) concentrations were calculated and correlated. Results indicate that FO systems with higher DS concentration caused ions to have lower hydration numbers and higher coordination numbers leading to lower diffusion coefficients. The higher hydration number of Mg2+ ions resulted in significantly lower ionic permeability as compared to Na+ ions at all concentrations (p = 0.002). The simulations also revealed that higher DS concentrations led to higher accumulation of ions in the membrane. This study provides insights on the proper selection of DS for FO systems.
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- 2019
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20. Density Functional Theory-Based Calculation Shed New Light on the Bizarre Addition of Cysteine Thiol to Dopaquinone
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Manickam Sugumaran, Shosuke Ito, Ryan Lacdao Arevalo, Hideaki Kasai, Hiroshi Nakanishi, and Ryo Kishida
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Models, Molecular ,0301 basic medicine ,Proton ,Stereochemistry ,Article ,Catalysis ,lcsh:Chemistry ,Inorganic Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Pigment ,0302 clinical medicine ,thiol addition to quinone ,Benzoquinones ,Reactivity (chemistry) ,Physical and Theoretical Chemistry ,lcsh:QH301-705.5 ,Molecular Biology ,cysteine ,Spectroscopy ,density functional theory ,Melanins ,chemistry.chemical_classification ,Binding Sites ,quinone reactions ,Chemistry ,Organic Chemistry ,General Medicine ,Cysteinyldopa ,Dihydroxyphenylalanine ,Computer Science Applications ,melanin ,dopaquinone ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,030220 oncology & carcinogenesis ,visual_art ,Thiol ,Michael reaction ,visual_art.visual_art_medium ,Density functional theory ,Protons ,Cysteine - Abstract
Two types of melanin pigments, brown to black eumelanin and yellow to reddish brown pheomelanin, are biosynthesized through a branched reaction, which is associated with the key intermediate dopaquinone (DQ). In the presence of l-cysteine, DQ immediately binds to the –SH group, resulting in the formation of cysteinyldopa necessary for the pheomelanin production. l-Cysteine prefers to bond with aromatic carbons adjacent to the carbonyl groups, namely C5 and C2. Surprisingly, this Michael addition takes place at 1,6-position of the C5 (and to some extent at C2) rather than usually expected 1,4-position. Such an anomaly on the reactivity necessitates an atomic-scale understanding of the binding mechanism. Using density functional theory-based calculations, we investigated the binding of l-cysteine thiolate (Cys–S−) to DQ. Interestingly, the C2–S bonded intermediate was less energetically stable than the C6–S bonded case. Furthermore, the most preferred Cys–S−-attacked intermediate is at the carbon-carbon bridge between the two carbonyls (C3–C4 bridge site) but not on the C5 site. This structure allows the Cys–S− to migrate onto the adjacent C5 or C2 with small activation energies. Further simulation demonstrated a possible conversion pathway of the C5–S (and C2–S) intermediate into 5-S-cysteinyldopa (and 2-S-cysteinyldopa), which is the experimentally identified major (and minor) product. Based on the results, we propose that the binding of Cys–S− to DQ proceeds via the following path: (i) coordination of Cys–S− to C3–C4 bridge, (ii) migration of Cys–S− to C5 (C2), (iii) proton rearrangement from cysteinyl –NH3+ to O4 (O3), and (iv) proton rearrangement from C5 (C2) to O3 (O4).
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- 2021
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21. Dopaquinone Conversion and Related Reactions
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Hideaki Kasai, Ryo Kishida, and Susan Meñez Aspera
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chemistry.chemical_classification ,Melanin ,chemistry.chemical_compound ,chemistry ,Stereochemistry ,Side chain ,Thiol ,Reactivity (chemistry) ,Reaction intermediate ,Cysteinyldopa ,HOMO/LUMO ,Cysteine - Abstract
The biosynthetic pathway of melanin is branched into pheomelanogenesis and eumelanogenesis at the stage of dopaquinone conversion. In the presence of intracellular thiols such as cysteine, dopaquinone binds to the sulfhydryl group of thiols, whereas under lower concentration of thiols dopaquinone spontaneously undergoes intramolecular cyclization through the alanyl side chain. The binding of cysteine produces cysteinyldopa necessary for pheomelanogenesis, whereas the cyclized product, cyclodopa further transforms into eumelanin. In this chapter, we introduce computational studies for cyclization and thiol binding for dopaquinone and structurally similar o-quinones with the emphasis on the competitive behavior between the two reactions. As a result, remarkable charge redistributions were observed during cyclization and thiol binding. From this point of view, the HOMO and LUMO levels of o-quinone are pointed out as important factors affecting the reactivity and the competition between the two reactions. Furthermore, a mechanistic issue of thiol binding is also discussed based on the atomic-scale simulation results, which showed the presence of unusual reaction intermediate. Our approach clarifies branched reactions of dopaquinone and resembling o-quinones from atomic nuclei and electrons world.
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- 2021
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22. Concluding Remarks and Future Perspectives
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Hideaki Kasai, Ryo Kishida, and Susan Meñez Aspera
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Physics ,Theoretical physics ,Nuclear Theory ,Atomic nucleus ,Physics::Atomic Physics ,Electron ,Nuclear Experiment ,Quantum - Abstract
Summarizing our findings, we give concluding remarks and future perspectives. One of next challenges will be to unveil quantum effects of atomic nuclei in melanogenesis. While the classical description of atomic nuclei is sufficient for most scenarios, certain phenomena require quantum mechanical description of both atomic nuclei and electrons.
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- 2021
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23. Dopachrome Conversion
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Ryo Kishida, Susan Meñez Aspera, and Hideaki Kasai
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- 2021
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24. Melanin Chemistry Explored by Quantum Mechanics
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Ryo Kishida, Susan Meñez Aspera, and Hideaki Kasai
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- 2021
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25. Melanin Chemistry
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Ryo Kishida, Susan Meñez Aspera, and Hideaki Kasai
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- 2021
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26. Cluster size effects on the adsorption of CO, O, and CO
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Ellaine Rose A, Beronio, Anne Nicole P, Hipolito, Joey D, Ocon, Hiroshi, Nakanishi, Hideaki, Kasai, and Allan Abraham B, Padama
- Abstract
In this study, we performed density functional theory based calculations to determine the effect of the size of Cu
- Published
- 2020
27. Vanadium doped polyoxometalate: induced active sites and increased hydrogen adsorption
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Hiroshi Nakanishi, Ryan Lacdao Arevalo, Shinobu Sekine, Susan Meñez Aspera, Hiroyuki Kawai, and Hideaki Kasai
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Dopant ,Doping ,Vanadium ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Chemical reaction ,Adsorption ,chemistry ,Ab initio quantum chemistry methods ,0103 physical sciences ,Polyoxometalate ,Physical chemistry ,General Materials Science ,Density functional theory ,010306 general physics ,0210 nano-technology - Abstract
We analyzed the electronic and structural properties of an α-Keggin type molybdenum-based polyoxometalate (POM) [[PMo12O40]3-] and its capacity for reduction reaction via H adsorption using Ab Initio calculations based on density functional theory (DFT). We also determined the change in the electronic properties brought about by vanadium substitutional doping, and its effect on the capacity of POM to adsorb H atom. We found that the optimal substitutional doping of 4 vanadium per one unit of POM is adequate to maintain its structural stability. Furthermore, increasing dopant concentration changes charge redistribution such that it induces charge transfer to an initially less active sites for H adsorption on pristine POM. This may increase the possibility of creating active sites from an initially inert H adsorption sites and allows for a higher density of H adsorption. This phenomenon could be relevant for chemical reactions that initially requires high number of pre-adsorbed H atoms.
- Published
- 2020
28. Review of the Current Status of the Hydrogen Economy
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Allan Abraham B. Padama, Bhume Chantaramolee, Ryan Lacdao Arevalo, and Hideaki Kasai
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business.industry ,Hydrogen economy ,Fossil fuel ,Production (economics) ,Hydrogen technologies ,Context (language use) ,Economic system ,Current (fluid) ,business ,Research findings - Abstract
The envisioned hydrogen-powered future is gradually taking shape in our time. In many countries around the world, active efforts to decarbonize energy systems have turned hydrogen into the centerpiece of grand master plans for clean and sustainable replacement to fossil fuels. This chapter tackles the current status of hydrogen economy, which provides a scientific, social, and economic perspective of hydrogen economy and its realization in our modern time. It elaborates the importance of research findings on the different aspects—hydrogen production, storage, delivery, and fuel cell—relevant to the realization of a hydrogen economy. It also illustrates the impact of the results of scientific investigations in attaining innovative hydrogen technologies. Lastly, it discusses the current technologies for hydrogen in the context of their implementation following the hydrogen roadmaps of different countries around the world.
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- 2020
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29. Hydrogen and Hydrogen-Containing Molecules on Metal Surfaces
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Allan Abraham B. Padama, Ryan Lacdao Arevalo, Hideaki Kasai, and Bhume Chantaramolee
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Metal ,Materials science ,Hydrogen ,chemistry ,business.industry ,visual_art ,Hydrogen economy ,visual_art.visual_art_medium ,chemistry.chemical_element ,Molecule ,Nanotechnology ,business ,Realization (systems) - Published
- 2020
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30. Behavior of Hydrogen and Hydrogen-Containing Molecules on Metal Surfaces
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Ryan Lacdao Arevalo, Hideaki Kasai, Bhume Chantaramolee, and Allan Abraham B. Padama
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Energy carrier ,Materials science ,Hydrogen ,business.industry ,Fossil fuel ,chemistry.chemical_element ,Nanotechnology ,Environmentally friendly ,Methane ,Metal ,chemistry.chemical_compound ,chemistry ,visual_art ,visual_art.visual_art_medium ,Molecule ,business ,Bimetallic strip - Abstract
As the lightest element, hydrogen is typically used as a test particle to establish the fundamental concepts in surface science and to evaluate surface reactivity and relevant surface processes. Aside from this, hydrogen attracts enormous interests for industrial and technological applications due to its potential use as the key energy carrier in the future. If realized, it will provide an environmental friendly alternative to conventional fossil fuels. This chapter aims to discuss the interaction of hydrogen and other compounds such as methane and water with transition metal surfaces. Also, induced surface reconstructions and induced surface segregations in bimetallic systems will be tackled. Such processes are usually taking place on surfaces in the presence of adsorbates. As much as possible, the role of metal surfaces in hydrogen-related applications will be evaluated based on their reactivities and properties that could possibly bring important ideas to further improve existing technologies that will aid in the realization of hydrogen-based technologies.
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- 2020
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31. Quantum States and Dynamics of Hydrogen
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Allan Abraham B. Padama, Bhume Chantaramolee, Ryan Lacdao Arevalo, and Hideaki Kasai
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Physics ,Measurement method ,Hydrogen ,chemistry ,Reaction dynamics ,Chemical physics ,Quantum state ,Atomic nucleus ,Dynamics (mechanics) ,chemistry.chemical_element ,Ground state ,Quantum - Abstract
Although the classical description of the atomic nuclei is sufficient in most scenarios, certain phenomena require a quantum mechanical treatment to fully grasp the nature of such particles. Since the quantum mechanical features are prominently associated with particles with small masses, hydrogen can exhibit quantum mechanical-based phenomena at relatively high temperatures as compared to other elements. This chapter will discuss various phenomena and applications where the quantum mechanical description of nuclei is vital. It starts with a brief review of the Born-Oppenheimer approximation, a necessary framework to treat the nuclei motions at their electronic ground state. The next two sections then discuss the hydrogen adsorption and hydrogen reaction dynamics on surfaces under the quantum mechanical framework, respectively. The chapter then concludes with a brief review of the measurement methods for hydrogen dynamics on surfaces.
- Published
- 2020
- Full Text
- View/download PDF
32. Reactions on Surfaces
- Author
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Bhume Chantaramolee, Hideaki Kasai, Ryan Lacdao Arevalo, and Allan Abraham B. Padama
- Subjects
Surface (mathematics) ,Reactions on surfaces ,Engineering ,Adsorption ,business.industry ,Density functional theory ,Nanotechnology ,Surface reaction ,business ,Mechanism (sociology) - Abstract
The reaction of atoms or molecules on surfaces is the cornerstone of surface science and is of profound importance in many physical, chemical, and biological phenomena. Understanding the basic mechanism of these surface reactions lay the foundation of sophisticated ideas that give rise to diverse industrial and technological applications that are important in our modern time. This chapter will discuss the mechanism of reactions between atoms or molecules on surfaces from the viewpoint of theory and simulation. The chapter starts with a brief discussion of density functional theory, followed by a review of basic crystallography, and ends with the theory of adsorption, desorption, and scattering. These basic concepts of surface science are indispensable in a more complex and thorough analysis of more complicated systems that will be discussed in the succeeding chapters.
- Published
- 2020
- Full Text
- View/download PDF
33. Design and control of dynamical quantum processes in ortho para H2 conversion on surfaces
- Author
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Rifki Muhida, Riza Muhida, Wilson A. Dino, Hiroshi Nakanishi, and Hideaki Kasai
- Published
- 2008
34. Adsorption of H on Cs/W(110): Impact of H on the Stability of Cs on the Surface
- Author
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Hideaki Kasai, Hiroshi Nakanishi, Nozomi Tanaka, Allan Abraham B. Padama, Masashi Kisaki, Mamiko Sasao, Motoi Wada, Wilson Agerico Diño, and Katsuyoshi Tsumori
- Subjects
Materials science ,Analytical chemistry ,chemistry.chemical_element ,Bioengineering ,Sorption ,02 engineering and technology ,Surfaces and Interfaces ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Alkali metal ,01 natural sciences ,Calculation methods ,Surfaces, Coatings and Films ,Ion ,Electronegativity ,Adsorption ,chemistry ,Mechanics of Materials ,Impurity ,Caesium ,0103 physical sciences ,010306 general physics ,0210 nano-technology ,Biotechnology - Published
- 2018
- Full Text
- View/download PDF
35. First principles study of surface stability and segregation of PdRuRh ternary metal alloy system
- Author
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Ryan Lacdao Arevalo, Susan Meñez Aspera, Hiroshi Nakanishi, and Hideaki Kasai
- Subjects
Surface (mathematics) ,Materials science ,Component (thermodynamics) ,Alloy ,Mixing (process engineering) ,Thermodynamics ,02 engineering and technology ,Surfaces and Interfaces ,engineering.material ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Stability (probability) ,Miscibility ,0104 chemical sciences ,Surfaces, Coatings and Films ,Condensed Matter::Materials Science ,Materials Chemistry ,engineering ,Density functional theory ,0210 nano-technology ,Ternary operation - Abstract
The recognized importance on the studies of alloyed materials is due to the high possibility of forming designer materials that caters to different applications. In any reaction and application, the stability and configuration of the alloy combination are important. In this study, we analyzed the surface stability and segregation of ternary metal alloy system PdRuRh through first principles calculation using density functional theory (DFT). We considered the possibility of forming phases as observed in the binary combinations of elements, i.e., completely miscible, and separating phases. With that, the model we analyzed for the ternary metal alloy slabs considers forming complete atomic miscibility, segregation of each component, and segregation of one component with mixing of the two other. Our results show that for the ternary combination of Pd, Rh and Ru, the Pd atoms have high tendency to segregate at the surface, while due to the high tendency of Ru and Rh to mix, core formation of a mixed RuRh is possible. Also, we determined that the trend of stability in the binary alloy system is a good determinant of stability in the ternary alloy system.
- Published
- 2018
- Full Text
- View/download PDF
36. Adsorption of Carbohydrazide on Au(111) and Au3Ni(111) Surfaces
- Author
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Hiroshi Nakanishi, Hideaki Kasai, Koichiro Asazawa, Susumu Yamaguchi, Ryan Lacdao Arevalo, and Susan Meñez Aspera
- Subjects
Chemistry ,02 engineering and technology ,General Chemistry ,Overpotential ,Carbohydrazide ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,0104 chemical sciences ,symbols.namesake ,chemistry.chemical_compound ,Adsorption ,Transition metal ,symbols ,Physical chemistry ,Density functional theory ,Reactivity (chemistry) ,van der Waals force ,0210 nano-technology - Abstract
Carbohydrazide (CH6N4O) is a potential substitute to hydrazine in fuel cell applications. This paper presents a theoretical study on the adsorption of carbohydrazide on Au(111) and Au3Ni(111) surfaces using first principles calculations based on density functional theory. Results show that without van der Waals correction in the calculations, carbohydrazide weakly physisorbs on Au(111), corroborating the experimentally observed high overpotential requirement for carbohydrazide oxidation on Au catalyst. An enhanced reactivity is observed by alloying Au with Ni due to the emergence of a localized d-band near the Fermi level that interacts strongly with the HOMO of carbohydrazide. On Au3Ni(111), a N–Ni bond between carbohydrazide and the surface is formed, characterized by the hybridization of N–pz and Ni–dzz states. These results pose insights into the use of 3d transition metals as alloying components in enhancing the reactivity of Au catalyst for carbohydrazide oxidation.
- Published
- 2018
- Full Text
- View/download PDF
37. Spin-up 'pristine-like' Dirac cone in bridge-structure graphene on Ni(111)
- Author
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Mary Clare Sison Escaño, Tien Quang Nguyen, and Hideaki Kasai
- Subjects
General Physics and Astronomy ,02 engineering and technology ,Electron ,01 natural sciences ,law.invention ,Metal ,symbols.namesake ,law ,0103 physical sciences ,010306 general physics ,Physics ,Condensed matter physics ,Graphene ,Scattering ,Fermi level ,Surfaces and Interfaces ,General Chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Surfaces, Coatings and Films ,visual_art ,symbols ,visual_art.visual_art_medium ,Condensed Matter::Strongly Correlated Electrons ,Density functional theory ,van der Waals force ,Spin-up ,0210 nano-technology - Abstract
We report a novel unshifted Dirac cone in energy and in k-space (pristine-like) for the spin-up electrons of experimentally verified bridge-structure of graphene on Ni(111) using density functional theory with van der Waals corrections. Also, we found that the spin-down electrons exhibit a metallic property. This co-existence of semi-metallic and metallic nature of electrons at the Fermi level can pave a way for effective ultra-thin spin-electronic devices such as memory devices, where different scattering of two spin-configurations of electrons is desired.
- Published
- 2018
- Full Text
- View/download PDF
38. Coadsorption of hydrazine and OH on the Ni(211) surface: A DFT study
- Author
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Mohammad Kemal Agusta, Hermawan Kresno Dipojono, Hideaki Kasai, Hiroshi Nakanishi, and Novianto Nur Hidayat
- Subjects
Surface (mathematics) ,Materials science ,Hydrogen bond ,Hydrazine ,Surfaces and Interfaces ,Condensed Matter Physics ,Surfaces, Coatings and Films ,Crystallography ,chemistry.chemical_compound ,Adsorption ,chemistry ,Materials Chemistry ,Molecule ,Density functional theory ,Elongation ,Vicinal - Abstract
Hydrazine (N2H4) and hydroxyl (OH) coadsorption on the Ni(211) surface is investigated using Density Functional Theory (DFT) based calculations. Effects of the vicinal steps and edges on the stability of various N2H4-OH coadsorption configurations are investigated and compared with the case of individual adsorption of the respective molecules. Stabilizing interaction between N2H4 and OH coadsorbate is found to be mediated by hydrogen-bond. The most stable interaction of N2H4-OH is found perpendicular to the step direction, with N2H4 and OH occupying the terrace and edge sites, respectively. Swapping the position of N2H4 and OH reduce the relative stability. However, placing N2H4 on edge sites stabilizes its cis-conformation with noticeable N - H bond elongation. Finally, N2H4 and OH coadsorption with N2H4 and OH coadsorbed on edge-sites is moderate in terms of overall stability but exhibits the weakest N2H4 coadsorption and longest hydrogen bond interaction distance. Nevertheless, these N2H4-OH coadsorption structures are almost equally accessible thermodynamically due to the relatively small energy differences among them (less than 0.2 eV). In an ideal extended periodic system at specific coverage used in this study, the obtained coadsorption reveals the formation of a chain-like structure between N2H4-OH linked by hydrogen bonds. The results demonstrate the importance of steps and edges in effective formations of hydrogen bond stabilizing N2H4 coadsorption with prospects of promoting proton-transfer-reaction from N2H4 to OH.
- Published
- 2021
- Full Text
- View/download PDF
39. Melanin Chemistry Explored by Quantum Mechanics : Investigations for Mechanism Identification and Reaction Design
- Author
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Ryo Kishida, Susan Meñez Aspera, Hideaki Kasai, Ryo Kishida, Susan Meñez Aspera, and Hideaki Kasai
- Subjects
- Melanins--Synthesis
- Abstract
This book discusses recent advances in theoretical–computational studies on the biosynthesis of melanin pigment (melanogenesis). These advances are being driven by the development of high-performance computers, new experimental findings, and extensive work on medical applications involving the control of pigmentation and the treatment of challenging dermatological diseases. Understanding the elementary processes involved in chemical reactions at the atomic scale is important in biochemical reaction design for effective control of the pigmentary system. Accordingly, the book focuses on the elementary steps involved in melanogenesis, which crucially affect the composition of the resulting melanin pigment by means of competitive reactions. The book also addresses reactions analogous to melanogenesis, with a focus on o-quinone reactions, which are especially important for understanding melanogenesis-associated cytotoxicity.
- Published
- 2021
40. Effects of Adsorbates (CO, COH, and HCO) on the Arrangement of Pd Atoms in PdCu(111)
- Author
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Allan Abraham B. Padama, Wilson Agerico Diño, Hideaki Kasai, Anna Patricia S. Cristobal, and Joey D. Ocon
- Subjects
Chemistry ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,General Energy ,Adsorption ,Physical chemistry ,Molecule ,Density functional theory ,Physical and Theoretical Chemistry ,Atomic physics ,0210 nano-technology ,Layer (electronics) - Abstract
We investigated the arrangement of Pd atoms in PdCu(111) when CO, COH, and HCO are introduced as adsorbates, by performing density functional theory (DFT) based calculations. We modeled several Pd alloyed Cu(111) surfaces, i.e., PdCu(111), by substituting small numbers of Cu atoms with Pd atoms in the topmost and subsurface layers of Cu(111). The arrangement of Pd atoms in the presence of adsorbates is evaluated by comparing the energy profiles of adsorbate–PdCu configurations with aggregated and nonaggregated surface and subsurface Pd atoms. In clean PdCu(111) surfaces, the Pd atoms prefer the nonaggregated arrangement. In the presence of the adsorbed molecules, however, we found that the Pd atoms will favor the aggregated configuration. CO and HCO adsorption structures are determined by the coordination of Pd atoms in the topmost layer. Their adsorption energies do not depend on the number of Pd atoms in the topmost layer alone but are also influenced by subsurface Pd atoms. On the other hand, COH is al...
- Published
- 2017
- Full Text
- View/download PDF
41. Effects of salinity on the CO2 permeation across lipid bilayer for microalgae biofixation: a molecular dynamics study
- Author
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Alvin B. Culaba, Hideaki Kasai, Robby B. Manrique, Melanie David, Nelson B. Arboleda, Joaquin Lorenzo Valmoria Moreno, Aristotle T. Ubando, and Al Rey Villagracia
- Subjects
Energy gradient ,010304 chemical physics ,020209 energy ,chemistry.chemical_element ,02 engineering and technology ,Plant Science ,Aquatic Science ,Permeation ,01 natural sciences ,Salinity ,Molecular dynamics ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Chemical physics ,Dipalmitoylphosphatidylcholine ,0103 physical sciences ,0202 electrical engineering, electronic engineering, information engineering ,Molecule ,Lipid bilayer ,Carbon - Abstract
The continuous threat of increasing CO2 concentration in the atmosphere has altered the carbon balance of our planet causing global climate change. Biological fixation of atmospheric CO2 by unicellular microorganisms such as microalgae is a promising technology pursued extensively by researchers as a means for carbon capture. The study aimed to provide an atomic level of study that will demonstrate the effect of the salinity on the mechanism of CO2 absorption across microalgae lipid bilayer. Molecular dynamics simulations were utilized to calculate the free energies of CO2 molecule as it permeates inside the microalgae cell. In thermodynamics, the transport process of a molecule can be demonstrated through its free energy gradient. Thus, calculating the free energies of CO2 molecule across microalgae lipid bilayer can elucidate the mechanisms of permeation processes. Four microalgae lipid bilayer structures were constructed that contains 128-DPPC (dipalmitoylphosphatidylcholine) lipid bilayer with 3640 water molecules with different NaCl concentrations: 0, 3, 13, and 19 NaCl molecules which correspond to a salinity level of 0, 50, 200, and 300 mM, respectively. The cavity insertion Widom method was used to calculate the free energy of CO2 molecule along the lipid bilayer. The results demonstrated that the salinity does not affect the free energies significantly, thus, it does not hamper CO2 transport across microalgae lipid membrane.
- Published
- 2017
- Full Text
- View/download PDF
42. Ru-Catalyzed Steam Methane Reforming: Mechanistic Study from First Principles Calculations
- Author
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Mary Clare Sison Escaño, Susan Meñez Aspera, Ryan Lacdao Arevalo, Hiroshi Nakanishi, and Hideaki Kasai
- Subjects
Reaction mechanism ,General Chemical Engineering ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,Methane ,Article ,0104 chemical sciences ,Catalysis ,Steam reforming ,lcsh:Chemistry ,chemistry.chemical_compound ,chemistry ,lcsh:QD1-999 ,Elementary reaction ,Oxidative coupling of methane ,0210 nano-technology ,Bond cleavage ,Hydrogen production - Abstract
Elucidating the reaction mechanism of steam methane reforming (SMR) is imperative for the rational design of catalysts for efficient hydrogen production. In this paper, we provide mechanistic insights into SMR on Ru surface using first principles calculations based on dispersion-corrected density functional theory. Methane activation (i.e., C–H bond cleavage) was found to proceed via a thermodynamically exothermic dissociative adsorption process, resulting in (CHy + zH)* species (“*” denotes a surface-bound state, and y + z = 4), with C* and CH* being the most stable adsorbates. The calculation of activation barriers suggests that the conversion of C* into O-containing species via C–O bond formation is kinetically slow, indicating that the surface reaction of carbon intermediates with oxygen is a possible rate-determining step. The results suggest the importance of subsequent elementary reactions following methane activation in determining the formation of stable carbon structures on the surface that deactivates the catalyst or the conversion of carbon into O-containing species.
- Published
- 2017
43. Ab initio study on hydrogen interaction with calcium decorated silicon carbide nanotube
- Author
-
Jessiel Siaron Gueriba, Al Rey Villagracia, Nelson B. Arboleda, Hideaki Kasai, Melanie David, and Allan Abraham B. Padama
- Subjects
Nanotube ,Materials science ,Hydrogen ,Renewable Energy, Sustainability and the Environment ,Inorganic chemistry ,Binding energy ,Ab initio ,Energy Engineering and Power Technology ,chemistry.chemical_element ,02 engineering and technology ,Calcium ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Hydrogen storage ,Fuel Technology ,chemistry ,Molecule ,Density functional theory ,0210 nano-technology - Abstract
Ab initio study on the viability of calcium decorated silicon carbide nanotube as a hydrogen storage material was conducted. Calcium strongly adsorbs on silicon carbide nanotube (SiCNT) with a significant binding energy of −2.83 eV, thus calcium's low cohesive energy and strong binding with SiCNT may prevent Ca to form clusters with other adsorbates. Bader charge analysis also revealed a charge transfer of 1.45e from Ca to SiCNT resulting to calcium's cationic state, which may induce charge polarization to a nearby molecule such as hydrogen. Hydrogen molecule was then allowed to interact with the calcium adatom where it exhibited charge polarization, induced by the electric field from calcium's positive charge. This resulted to a significant binding energy of −0.22 eV for the first hydrogen molecule. Results reveal that Ca on SiCNT can hold up to 7 hydrogen molecules and can be a promising candidate for a hydrogen storage material.
- Published
- 2017
- Full Text
- View/download PDF
44. First Principles Calculations of Transition Metal Binary Alloys: Phase Stability and Surface Effects
- Author
-
Ryo Kishida, Ryan Lacdao Arevalo, Shimizu Koji, Hideaki Kasai, Susan Meñez Aspera, Nguyen Hoang Linh, Kazuki Kojima, and Hiroshi Nakanishi
- Subjects
Materials science ,Alloy ,Thermodynamics ,Binary number ,02 engineering and technology ,engineering.material ,010402 general chemistry ,01 natural sciences ,Miscibility ,Metal ,Condensed Matter::Materials Science ,Lattice constant ,Transition metal ,Materials Chemistry ,Electrical and Electronic Engineering ,Metal alloy ,Phase stability ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,0104 chemical sciences ,Electronic, Optical and Magnetic Materials ,Crystallography ,visual_art ,visual_art.visual_art_medium ,engineering ,0210 nano-technology - Abstract
The phase stability and surface effects on binary transition metal nano-alloy systems were investigated using density functional theory-based first principles calculations. In this study, we evaluated the cohesive and alloying energies of six binary metal alloy bulk systems that sample each type of alloys according to miscibility, i.e., Au-Ag and Pd-Ag for the solid solution-type alloys (SS), Pd-Ir and Pd-Rh for the high-temperature solid solution-type alloys (HTSS), and Au-Ir and Ag-Rh for the phase-separation (PS)-type alloys. Our results and analysis show consistency with experimental observations on the type of materials in the bulk phase. Varying the lattice parameter was also shown to have an effect on the stability of the bulk mixed alloy system. It was observed, particularly for the PS- and HTSS-type materials, that mixing gains energy from the increasing lattice constant. We furthermore evaluated the surface effects, which is an important factor to consider for nanoparticle-sized alloys, through analysis of the (001) and (111) surface facets. We found that the stability of the surface depends on the optimization of atomic positions and segregation of atoms near/at the surface, particularly for the HTSS and the PS types of metal alloys. Furthermore, the increase in energy for mixing atoms at the interface of the atomic boundaries of PS- and HTSS-type materials is low enough to overcome by the gain in energy through entropy. These, therefore, are the main proponents for the possibility of mixing alloys near the surface.
- Published
- 2017
- Full Text
- View/download PDF
45. Symmetry Breaking-induced Band-splitting in GaAs Thin Film by First-principles Calculations
- Author
-
Hideaki Kasai, Masahiko Tani, and Mary Clare Sison Escaño
- Subjects
Band splitting ,Materials science ,Condensed matter physics ,02 engineering and technology ,Surfaces and Interfaces ,021001 nanoscience & nanotechnology ,01 natural sciences ,0103 physical sciences ,General Materials Science ,Symmetry breaking ,Thin film ,010306 general physics ,0210 nano-technology ,Instrumentation ,Spectroscopy - Published
- 2017
- Full Text
- View/download PDF
46. A novel mechanism of spin-orientation dependence of O2 reactivity from first principles methods
- Author
-
Hideaki Kasai and Mary Clare Sison Escaño
- Subjects
Coupling ,Surface (mathematics) ,Condensed matter physics ,Chemistry ,Charge (physics) ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,Ferromagnetism ,Computational chemistry ,Orientation (geometry) ,0103 physical sciences ,Condensed Matter::Strongly Correlated Electrons ,Reactivity (chemistry) ,010306 general physics ,0210 nano-technology ,Mechanism (sociology) ,Spin-½ - Abstract
A new mechanism beyond charge transfer, spin-orientation dependence of O2 reactivity on a ferromagnetic surface, is presented using first-principles methods. O2 favors the anti-parallel configuration at the transition state and a parallel configuration at distances above and below it. This suggests coupling and is found to originate from the unquenched spin moment of O2.
- Published
- 2017
- Full Text
- View/download PDF
47. Interaction of CO, O, and CO
- Author
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Allan Abraham B, Padama, Joey D, Ocon, Hiroshi, Nakanishi, and Hideaki, Kasai
- Abstract
We performed density functional theory (DFT) based calculations to investigate the interaction of CO
- Published
- 2019
48. Hydrogen and Hydrogen-Containing Molecules on Metal Surfaces : Towards the Realization of Sustainable Hydrogen Economy
- Author
-
Hideaki Kasai, Allan Abraham B. Padama, Bhume Chantaramolee, Ryan L. Arevalo, Hideaki Kasai, Allan Abraham B. Padama, Bhume Chantaramolee, and Ryan L. Arevalo
- Subjects
- Surfaces (Physics), Chemistry, Physical and theoretical, Surfaces (Technology), Thin films, Materials, Catalysis, Force and energy
- Abstract
This book is dedicated to recent advancements in theoretical and computational studies on the interactions of hydrogen and hydrogenated molecules with metal surfaces. These studies are driven by the development of high-performance computers, new experimental findings, and the extensive work of technological applications towards the realization of a sustainable hydrogen economy. Understanding of the elementary processes of physical and chemical reactions on the atomic scale is important in the discovery of new materials with high chemical reactivity and catalytic activity, as well as high stability and durability. From this point of view, the book focuses on the behavior of hydrogen and hydrogenated molecules on flat, stepped, and reconstructed metal surfaces. It also tackles the quantum mechanical properties of hydrogen and related adsorbates; namely, molecular orbital angular momentum (spin) and diffusion along the minimum potential energy landscape on metal surfaces. All of these profoundly influence the outcomes of (1) catalytic reactions that involve hydrogen; (2) hydrogen storage in metals; and (3) hydrogen purification membranes. Lastly, it surveys the current status of the technology, outlook, and challenges for the long-desired sustainable hydrogen economy in relation to the topics covered in the book.
- Published
- 2020
49. Density functional theory-based investigation of hydrogen adsorption on zinc oxide (101¯0) surface: Revisited
- Author
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Allan Abraham B. Padama, Nobuhiko Sarukura, Melvin John F. Empizo, Arnel Salvador, Erick John Carlo D. Solibet, Hideaki Kasai, Hiroshi Nakanishi, John Symon C. Dizon, Manuel M. Balmeo, and Verdad C. Agulto
- Subjects
Materials science ,Hydrogen ,Band gap ,Analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,Zinc ,010402 general chemistry ,01 natural sciences ,symbols.namesake ,Adsorption ,Monolayer ,Materials Chemistry ,business.industry ,Fermi level ,Surfaces and Interfaces ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,0104 chemical sciences ,Surfaces, Coatings and Films ,Semiconductor ,chemistry ,symbols ,Density functional theory ,0210 nano-technology ,business - Abstract
Density functional theory based calculations with Hubbard correction (DFT + U) were performed to investigate the effects of varying coverage and different adsorption sites on hydrogen (H) adsorption on zinc oxide (ZnO) ( 10 1 ¯ 0 ) surface. Results show that H adsorption on top of oxygen (O) at low coverage (0.25 monolayer, ML) shifts the conduction band below the Fermi level and narrows the band gap. These phenomena are attributed to the charge transfer between H and the surface zinc (Zn) and O atoms. On the other hand, the H adsorption on top of Zn at low coverage (0.25 ML) shows an overlapping of H, Zn, and O states while maintaining the semiconductor nature of the system. At high coverage (1.0 ML), a charge accumulation layer on the surface forms, and the mechanisms that govern the interactions of H atoms when adsorbed exclusively on top of Zn or top of O are found to be similar with the low coverage cases. Lastly, at full coverage (2.0 ML), the effect of H on top of Zn is more evident as the system retained its semiconducting property. The adsorption energy is enhanced due to the reinforced overlapping of the H, Zn, and O states and due to the possible attraction between the adsorbed H atoms. The properties and stability of full-coverage adsorption were explained based on the findings on high- and low- coverages adsorption. The findings of the study will aid in understanding the interaction of H with the ZnO surface toward the further development of ZnO's optoelectronic applications.
- Published
- 2021
- Full Text
- View/download PDF
50. Sticking and Desorption of Atomic Hydrogen on the Armchair Edges of Bilayer Graphene
- Author
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Michelle Natividad, Nelson Arboleda, and Hideaki Kasai
- Subjects
Electrochemistry - Published
- 2016
- Full Text
- View/download PDF
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