398 results on '"Hilbert, Friederike"'
Search Results
2. Public health aspects of Vibrio spp. related to the consumption of seafood in the EU.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Baker‐Austin, Craig, Hervio‐Heath, Dominique, Martinez‐Urtaza, Jaime, and Caro, Eva Sanjuán
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VIBRIO vulnificus ,EXTREME weather ,VIBRIO cholerae ,MOBILE genetic elements ,HEALTH risk assessment - Abstract
Vibrio parahaemolyticus, Vibrio vulnificus and non‐O1/non‐O139 Vibrio cholerae are the Vibrio spp. of highest relevance for public health in the EU through seafood consumption. Infection with V. parahaemolyticus is associated with the haemolysins thermostable direct haemolysin (TDH) and TDH‐related haemolysin (TRH) and mainly leads to acute gastroenteritis. V. vulnificus infections can lead to sepsis and death in susceptible individuals. V. cholerae non‐O1/non‐O139 can cause mild gastroenteritis or lead to severe infections, including sepsis, in susceptible individuals. The pooled prevalence estimate in seafood is 19.6% (95% CI 13.7–27.4), 6.1% (95% CI 3.0–11.8) and 4.1% (95% CI 2.4–6.9) for V. parahaemolyticus, V. vulnificus and non‐choleragenic V. cholerae, respectively. Approximately one out of five V. parahaemolyticus‐positive samples contain pathogenic strains. A large spectrum of antimicrobial resistances, some of which are intrinsic, has been found in vibrios isolated from seafood or food‐borne infections in Europe. Genes conferring resistance to medically important antimicrobials and associated with mobile genetic elements are increasingly detected in vibrios. Temperature and salinity are the most relevant drivers for Vibrio abundance in the aquatic environment. It is anticipated that the occurrence and levels of the relevant Vibrio spp. in seafood will increase in response to coastal warming and extreme weather events, especially in low‐salinity/brackish waters. While some measures, like high‐pressure processing, irradiation or depuration reduce the levels of Vibrio spp. in seafood, maintaining the cold chain is important to prevent their growth. Available risk assessments addressed V. parahaemolyticus in various types of seafood and V. vulnificus in raw oysters and octopus. A quantitative microbiological risk assessment relevant in an EU context would be V. parahaemolyticus in bivalve molluscs (oysters), evaluating the effect of mitigations, especially in a climate change scenario. Knowledge gaps related to Vibrio spp. in seafood and aquatic environments are identified and future research needs are prioritised. [ABSTRACT FROM AUTHOR]
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- 2024
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3. BSE risk posed by ruminant collagen and gelatine derived from bones.
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Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Adkin, Amie, Andreoletti, Olivier, Griffin, John, and Lanfranchi, Barbara
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SPINE ,GELATIN ,RUMINANTS ,SPINAL cord ,RISK exposure - Abstract
The European Commission requested an estimation of the BSE risk (C‐, L‐ and H‐BSE) from gelatine and collagen derived from ovine, caprine or bovine bones, and produced in accordance with Regulation (EC) No 853/2004, or Regulation (EC) No 1069/2009 and its implementing Regulation (EU) No 142/2011. A quantitative risk assessment was developed to estimate the BSE infectivity, measured in cattle oral infectious dose 50 (CoID50), in a small size batch of gelatine including one BSE‐infected bovine or ovine animal at the clinical stage. The model was built on a scenario where all ruminant bones could be used for the production of gelatine and high‐infectivity tissues remained attached to the skull (brain) and vertebral column (spinal cord). The risk and exposure pathways defined for humans and animals, respectively, were identified. Exposure routes other than oral via food and feed were considered and discussed but not assessed quantitatively. Other aspects were also considered as integrating evidence, like the epidemiological situation of the disease, the species barrier, the susceptibility of species to BSE and the assumption of an exponential dose–response relationship to determine the probability of BSE infection in ruminants. Exposure to infectivity in humans cannot be directly translated to risk of disease because the transmission barrier has not yet been quantified, although it is considered to be substantial, i.e. much greater amounts of infectivity would be needed to successfully infect a human and greater in the oral than in the parenteral route of exposure. The probability that no new case of BSE in the cattle or small ruminant population would be generated through oral exposure to gelatine made of ruminant bones is 99%–100% (almost certain) This conclusion is based on the current state of knowledge, the epidemiological situation of the disease and the current practices, and is also valid for collagen. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 20: Suitability of taxonomic units notified to EFSA until March 2024.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, and Querol, Amparo
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ENTEROCOCCUS faecium ,SERRATIA marcescens ,MICROBACTERIUM ,FEED additives ,AGROBACTERIUM - Abstract
The qualified presumption of safety (QPS) process was developed to provide a safety assessment approach for microorganisms intended for use in food or feed chains. In the period covered by this statement, no new information was found that would change the status of previously recommended QPS TUs. The TUs in the QPS list were updated based on a verification, against their respective authoritative databases, of the correctness of the names and completeness of synonyms. A new procedure has been established to ensure the TUs are kept up to date in relation to recent taxonomical insights. Of 81 microorganisms notified to EFSA between October 2023 and March 2024 (45 as feed additives, 25 as food enzymes or additives, 11 as novel foods), 75 were not evaluated because: 15 were filamentous fungi, 1 was Enterococcus faecium, 10 were Escherichia coli, 1 was a Streptomyces (all excluded from the QPS evaluation) and 46 were TUs that already have a QPS status. Two of the other eight notifications were already evaluated for a possible QPS status in the previous Panel Statement: Heyndrickxia faecalis (previously Weizmannia faecalis) and Serratia marcescens. One was notified at genus level so could not be assessed for QPS status. The other five notifications belonging to five TUs were assessed for possible QPS status. Akkermansia muciniphila and Actinomadura roseirufa were still not recommended for QPS status due to safety concerns. Rhizobium radiobacter can be recommended for QPS status with the qualification for production purposes. Microbacterium arborescens and Burkholderia stagnalis cannot be included in the QPS list due to a lack of body of knowledge for its use in the food and feed chain and for B. stagnalis also due to safety concerns. A. roseirufa and B. stagnalis have been excluded from further QPS assessment. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Evaluation of alternative methods of tunnel composting (submitted by the European Composting Network) II.
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Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Skandamis, Panagiotis, Ru, Giuseppe, Simmons, Marion, De Cesare, Alessandra, Escamez, Pablo Fernandez, Suffredini, Elisabetta, Ortiz‐Pelaez, Angel, and Ordonez, Avelino Alvarez
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COMPOSTING ,CANINE parvovirus ,EVALUATION methodology ,ENTEROCOCCUS faecalis ,RAILROAD tunnels ,PARVOVIRUSES - Abstract
Two alternative methods for producing compost in a tunnel, from certain category (Cat.) 3 animal by‐products (ABP) and other non‐ABP material, were assessed. The first method proposed a minimum temperature of 55°C for 72 h and the second 60°C for 48 h, both with a maximum particle size of 200 mm. The assessment of the Panel on Biological Hazards (BIOHAZ) exclusively focused on Cat. 3 ABP materials (catering waste and processed foodstuffs of animal origin no longer intended for human consumption). The proposed composting processes were evaluated for their efficacy to achieve a reduction of at least 5 log10 of Enterococcus faecalis and Salmonella Senftenberg (775W, H2S negative) and at least 3 log10 of relevant thermoresistant viruses. The applicant provided a list of biological hazards that may enter the composting process and selected parvoviruses as the indicator of the thermoresistant viruses. The evidence provided by the applicant included: (a) literature data on thermal inactivation of biological hazards; (b) results from validation studies on the reduction of E. faecalis, Salmonella Senftenberg 775W H2S negative and canine parvovirus carried out in composting plants across Europe; (c) and experimental data from direct measurements of reduction of infectivity of murine parvovirus in compost material applying the time/temperature conditions of the two alternative methods. The evidence provided showed the capacity of the proposed alternative methods to reduce E. faecalis and Salmonella Senftenberg 775W H2S negative by at least 5 log10, and parvoviruses by at least 3 log10. The BIOHAZ Panel concluded that the two alternative methods under assessment can be considered to be equivalent to the processing method currently approved in the Commission Regulation (EU) No 142/2011. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Re‐evaluation of certain aspects of the EFSA Scientific Opinion of April 2010 on risk assessment of parasites in fishery products, based on new scientific data. Part 1: ToRs1–3.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Buchmann, Kurt, Careche, Mercedes, Levsen, Arne, and Mattiucci, Simonetta
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FISHERY products ,EUROPEAN seabass ,FISH parasites ,PULSED power systems ,PARASITES ,SPARUS aurata - Abstract
Surveillance data published since 2010, although limited, showed that there is no evidence of zoonotic parasite infection in market quality Atlantic salmon, marine rainbow trout, gilthead seabream, turbot, meagre, Atlantic halibut, common carp and European catfish. No studies were found for greater amberjack, brown trout, African catfish, European eel and pikeperch. Anisakis pegreffii, A. simplex (s. s.) and Cryptocotyle lingua were found in European seabass, Atlantic bluefin tuna and/or cod, and Pseudamphistomum truncatum and Paracoenogonimus ovatus in tench, produced in open offshore cages or flow‐through ponds or tanks. It is almost certain that fish produced in closed recirculating aquaculture systems (RAS) or flow‐through facilities with filtered water intake and exclusively fed heat‐treated feed are free of zoonotic parasites. Since the last EFSA opinion, the UV‐press and artificial digestion methods have been developed into ISO standards to detect parasites in fish, while new UV‐scanning, optical, molecular and OMICs technologies and methodologies have been developed for the detection, visualisation, isolation and/or identification of zoonotic parasites in fish. Freezing and heating continue to be the most efficient methods to kill parasites in fishery products. High‐pressure processing may be suitable for some specific products. Pulsed electric field is a promising technology although further development is needed. Ultrasound treatments were not effective. Traditional dry salting of anchovies successfully inactivated Anisakis. Studies on other traditional processes – air‐drying and double salting (brine salting plus dry salting) – suggest that anisakids are successfully inactivated, but more data covering these and other parasites in more fish species and products is required to determine if these processes are always effective. Marinade combinations with anchovies have not effectively inactivated anisakids. Natural products, essential oils and plant extracts, may kill parasites but safety and organoleptic data are lacking. Advanced processing techniques for intelligent gutting and trimming are being developed to remove parasites from fish. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Persistence of microbiological hazards in food and feed production and processing environments.
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Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Fox, Edward, Gosling, Rebecca, Gil, Beatriz Melero, and Møretrø, Trond
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FOOD production ,FOOD safety ,FOOD industry ,MANUFACTURING processes ,SALMONELLA enterica ,SEAFOOD industry ,ANIMAL industry - Abstract
Listeria monocytogenes (in the meat, fish and seafood, dairy and fruit and vegetable sectors), Salmonella enterica (in the feed, meat, egg and low moisture food sectors) and Cronobacter sakazakii (in the low moisture food sector) were identified as the bacterial food safety hazards most relevant to public health that are associated with persistence in the food and feed processing environment (FFPE). There is a wide range of subtypes of these hazards involved in persistence in the FFPE. While some specific subtypes are more commonly reported as persistent, it is currently not possible to identify universal markers (i.e. genetic determinants) for this trait. Common risk factors for persistence in the FFPE are inadequate zoning and hygiene barriers; lack of hygienic design of equipment and machines; and inadequate cleaning and disinfection. A well‐designed environmental sampling and testing programme is the most effective strategy to identify contamination sources and detect potentially persistent hazards. The establishment of hygienic barriers and measures within the food safety management system, during implementation of hazard analysis and critical control points, is key to prevent and/or control bacterial persistence in the FFPE. Once persistence is suspected in a plant, a 'seek‐and‐destroy' approach is frequently recommended, including intensified monitoring, the introduction of control measures and the continuation of the intensified monitoring. Successful actions triggered by persistence of L. monocytogenes are described, as well as interventions with direct bactericidal activity. These interventions could be efficient if properly validated, correctly applied and verified under industrial conditions. Perspectives are provided for performing a risk assessment for relevant combinations of hazard and food sector to assess the relative public health risk that can be associated with persistence, based on bottom‐up and top‐down approaches. Knowledge gaps related to bacterial food safety hazards associated with persistence in the FFPE and priorities for future research are provided. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 19: Suitability of taxonomic units notified to EFSA until September 2023.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, and Querol, Amparo
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ENTEROCOCCUS faecium ,SERRATIA marcescens ,KLEBSIELLA pneumoniae ,ACTIVE food packaging ,PSEUDOMONAS putida ,CHLAMYDOMONAS reinhardtii - Abstract
The qualified presumption of safety (QPS) process was developed to provide a safety assessment approach for microorganisms intended for use in food or feed chains. The QPS approach is based on an assessment of published data for each taxonomic unit (TU), with respect to its taxonomic identity, the body of relevant knowledge and safety concerns. Safety concerns identified for a TU are, where possible, confirmed at the species/strain or product level and reflected by 'qualifications'. In the period covered by this Statement, no new information was found that would change the status of previously recommended QPS TUs. Of 71 microorganisms notified to EFSA between April and September 2023 (30 as feed additives, 22 as food enzymes or additives, 7 as novel foods and 12 from plant protection products [PPP]), 61 were not evaluated because: 26 were filamentous fungi, 1 was Enterococcus faecium, 5 were Escherichia coli, 1 was a bacteriophage (all excluded from the QPS evaluation) and 28 were TUs that already have a QPS status. The other 10 notifications belonged to 9 TUs which were evaluated for a possible QPS status: Ensifer adhaerens and Heyndrickxia faecalis did not get the QPS recommendation due to the limited body of knowledge about their occurrence in the food and/or feed chains and Burkholderia ubonensis also due to its ability to generate biologically active compounds with antimicrobial activity; Klebsiella pneumoniae, Serratia marcescens and Pseudomonas putida due to safety concerns. K. pneumoniae is excluded from future QPS evaluations. Chlamydomonas reinhardtii is recommended for QPS status with the qualification 'for production purposes only'; Clostridium tyrobutyricum is recommended for QPS status with the qualification 'absence of genetic determinants for toxigenic activity'; Candida oleophila has been added as a synonym of Yarrowia lipolytica. The Panel clarifies the extension of the QPS status for genetically modified strains. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 17: suitability of taxonomic units notified to EFSA until September 2022
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Escámez, Pablo Salvador Fernández, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Correia, Sandra, Herman, Lieve, Koutsoumanis, Konstantino, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagioti, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Escámez, Pablo Salvador Fernández, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Correia, Sandra, and Herman, Lieve
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Streptococcus orali ,Geobacillus thermodenitrifican ,Ogataea polymorpha ,Xanthobacter ,Lactiplantibacillus argentoratensi ,QPS - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a regularly updated generic pre-evaluation of the safety of microorganisms, intended for use in the food or feed chains, to support the work of EFSA's Scientific Panels. The QPS approach is based on an assessment of published data for each agent, with respect to its taxonomic identity, the body of relevant knowledge and safety concerns. Safety concerns identified for a taxonomic unit (TU) are, where possible, confirmed at the species/strain or product level and reflected by 'qualifications'. In the period covered by this Statement, new information was found leading to the withdrawal of the qualification 'absence of aminoglycoside production ability' for Bacillus velezensis. The qualification for Bacillus paralicheniformis was changed to 'absence of bacitracin production ability'. For the other TUs, no new information was found that would change the status of previously recommended QPS TUs. Of 52 microorganisms notified to EFSA between April and September 2022 (inclusive), 48 were not evaluated because: 7 were filamentous fungi, 3 were Enterococcus faecium, 2 were Escherichia coli, 1 was Streptomyces spp., and 35 were taxonomic units (TUs) that already have a QPS status. The other four TUs notified within this period, and one notified previously as a different species, which was recently reclassified, were evaluated for the first time for a possible QPS status: Xanthobacter spp. could not be assessed because it was not identified to the species level; Geobacillus thermodenitrificans is recommended for QPS status with the qualification 'absence of toxigenic activity'. Streptoccus oralis is not recommended for QPS status. Ogataea polymorpha is proposed for QPS status with the qualification 'for production purposes only'. Lactiplantibacillus argentoratensis (new species) is included in the QPS list.
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- 2023
10. Low-Level Tetracycline Resistance Gene tet(O)_3 in Campylobacter jejuni.
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Infectiebiologie, Pacífico, Cátia, Wösten, Marc M S M, Hilbert, Friederike, Infectiebiologie, Pacífico, Cátia, Wösten, Marc M S M, and Hilbert, Friederike
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- 2023
11. Microbiological hazards associated with the use of water in the post-harvest handling and processing operations of fresh and frozen fruits, vegetables and herbs (ffFVHs). Part 1 (outbreak data analysis, literature review and stakeholder questionnaire)
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Koutsoumanis, K., Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, M., Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis N., Suffredini, Elisabetta, Banach, J.L., Ottoson, Jakob, Zhou, Bin, da Silva Felicio, Maria Teresa, Jacxsens, Liesbeth, Lourenco Martins, Joana, Messens, Winy, Allende, Ana, Koutsoumanis, K., Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, M., Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis N., Suffredini, Elisabetta, Banach, J.L., Ottoson, Jakob, Zhou, Bin, da Silva Felicio, Maria Teresa, Jacxsens, Liesbeth, Lourenco Martins, Joana, Messens, Winy, and Allende, Ana
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The contamination of water used in post-harvest handling and processing operations of fresh andfrozen fruit, vegetables and herbs (ffFVHs) is a global concern. The most relevant microbial hazardsassociated with this water are:Listeria monocytogenes,Salmonellaspp., human pathogenicEscherichia coliand enteric viruses, which have been linked to multiple outbreaks associated withffFVHs in the European Union (EU). Contamination (i.e. the accumulation of microbiological hazards) ofthe process water during post-harvest handling and processing operations is affected by severalfactors including: the type and contamination of the FVHs being processed, duration of the operationand transfer of microorganisms from the product to the water and vice versa, etc. For food businessoperators (FBOp), it is important to maintain the microbiological quality of the process water to assurethe safety of ffFVHs. Good manufacturing practices (GMP) and good hygienic practices (GHP) relatedto a water management plan and the implementation of a water management system are critical tomaintain the microbiological quality of the process water. Identified hygienic practices include technicalmaintenance of infrastructure, training of staff and cooling of post-harvest process water. Interventionstrategies (e.g. use of water disinfection treatments and water replenishment) have been suggested tomaintain the microbiological quality of process water. Chlorine-based disinfectants and peroxyaceticacid have been reported as common water disinfection treatments. However, given current practices inthe EU, evidence of their efficacy under industrial conditions is only available for chlorine-baseddisinfectants. The use of water disinfection treatments must be undertaken following an appropriatewater management strategy including validation, operational monitoring and verification. Duringoperational monitoring, real-time information on process parameters related to the process andproduct, as well as the water an
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- 2023
12. Monitoring of chronic wasting disease (CWD) (IV)
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordoñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Skandamis, Panagiotis, Suffredini, Elisabetta, Miller, Michael W, Mysterud, Atle, Nöremark, Maria, Simmons, Marion, Tranulis, Michael A, Vaccari, Gabriele, Viljugrein, Hildegunn, Ortiz-Pelaez, Angel, Ru, Giuseppe, Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
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663/664 - Abstract
The European Commission requested an analysis of the Chronic Wasting Disease (CWD) monitoring programme in Norway, Sweden, Finland, Iceland, Estonia, Latvia, Lithuania and Poland (9 January 2017–28 February 2022). Thirteen cases were detected in reindeer, 15 in moose and 3 in red deer. They showed two phenotypes, distinguished by the presence or absence of detectable disease-associated normal cellular prion protein (PrP) in lymphoreticular tissues. CWD was detected for the first time in Finland, Sweden and in other areas of Norway. In countries where the disease was not detected, the evidence was insufficient to rule out its presence altogether. Where cases were detected, the prevalence was below 1%. The data also suggest that the high-risk target groups for surveillance should be revised, and ‘road kill’ removed. Data show that, in addition to differences in age and sex, there are differences in the prion protein gene (PRNP) genotypes between positive and negative wild reindeer. A stepwise framework has been proposed with expanded minimum background surveillance to be implemented in European countries with relevant cervid species. Additional surveillance may include ad hoc surveys for four different objectives, specific to countries with/without cases, focusing on parallel testing of obex and lymph nodes from adult cervids in high-risk target groups, sustained over time, using sampling units and a data-driven design prevalence. Criteria for assessing the probability of CWD presence have been outlined, based on the definition of the geographical area, an annual assessment of risk of introduction, sustained minimum background surveillance, training and engagement of stakeholders and a surveillance programme based on data-driven parameters. All positive cases should be genotyped. Sample sizes for negative samples have been proposed to detect and estimate the frequency of PRNP polymorphisms. Double-strand sequencing of the entire PRNP open reading frame should be undertaken for all selected samples, with data collated in a centralised collection system at EU level. info:eu-repo/semantics/publishedVersion
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- 2023
13. Evaluation of a multi-step catalytic co-processing hydrotreatment for the production of renewable fuels using Category 3 animal fat and used cooking oils
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Fernández Escámez, Pablo, Griffin, John, Ortiz-Pelaez, Angel, Alvarez-Ordoñez, Avelino, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis, Konstantino, Allende, Ana, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagioti, Suffredini, Elisabetta, Fernández Escámez, Pablo, Griffin, John, Ortiz-Pelaez, Angel, and Alvarez-Ordoñez, Avelino
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renewable fuel ,663/664 ,Veterinary (miscellaneous) ,hydrotreatment ,Animal Science and Zoology ,Parasitology ,Plant Science ,cooking oil ,Microbiology ,Category 3 ,animal fat ,Food Science - Abstract
An alternative method for the production of renewable fuels from rendered animal fats (pretreated using methods 1–5 or method 7 as described in Annex IV of Commission Regulation (EC) No 2011/142) and used cooking oils, derived from Category 3 animal by-products, was assessed. The method is based on a catalytic co-processing hydrotreatment using a middle distillate followed by a stripping step. The materials must be submitted to a pressure of at least 60 bars and a temperature of at least 270°C for at least 4.7 min. The application focuses on the demonstration of the level of reduction of spores from non-pathogenic spore-forming indicator bacterial species (Bacillus subtilis and Desulfotomaculum kuznetsovii), based on a non-systematic review of published data and additional extrapolation analyses. The EFSA BIOHAZ Panel considers that the application and supporting literature contain sufficient evidence that the proposed alternative method can achieve a reduction of at least 5 log10 in the spores of B. subtilis and a 12 log10 reduction in the spores of C. botulinum. The alternative method under evaluation is considered at least equivalent to the processing methods currently approved in the Commission Regulation (EU) No 2011/142. info:eu-repo/semantics/publishedVersion
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- 2022
14. Update of the list of QPS-recommended microbiological agents intentionally added to food or feed as notified to EFSA 16: suitability of taxonomic units notified to EFSA until March 2022
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Kostas, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, Herman, Lieve, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis, Kosta, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagioti, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, and Herman, Lieve
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663/664 ,Veterinary (miscellaneous) ,Companilactobacillus formosensi ,Pseudomonas fluorescen ,Plant Science ,Papiliotrema terrestri ,Microbiology ,Streptococcus salivarius ,QPS ,Ensifer adhaeren ,Pseudonocardia autotrophica ,Microbacterium foliorum ,Animal Science and Zoology ,Parasitology ,Food Science - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a regularly updated generic pre-evaluation of the safety of microorganisms, intended for use in the food or feed chains, to support the work of EFSA's Scientific Panels. The QPS approach is based on an assessment of published data for each agent, with respect to its taxonomic identity, the body of relevant knowledge, safety concerns and occurrence of antimicrobial resistance. Safety concerns identified for a taxonomic unit (TU) are, where possible, confirmed at the species/strain or product level and reflected by ‘qualifications’. In the period covered by this statement, no new information was found that would change the status of previously recommended QPS TUs. Of the 50 microorganisms notified to EFSA in October 2021 to March 2022 (inclusive), 41 were not evaluated: 10 filamentous fungi, 1 Enterococcus faecium, 1 Clostridium butyricum, 3 Escherichia coli and 1 Streptomyces spp. because are excluded from QPS evaluation, and 25 TUs that have already a QPS status. Nine notifications, corresponding to seven TUs were evaluated: four of these, Streptococcus salivarius, Companilactobacillus formosensis, Pseudonocardia autotrophica and Papiliotrema terrestris, being evaluated for the first time. The other three, Microbacterium foliorum, Pseudomonas fluorescens and Ensifer adhaerens were re-assessed. None of these TUs were recommended for QPS status: Ensifer adhaerens, Microbacterium foliorum, Companilactobacillus formosensis and Papiliotrema terrestris due to a limited body of knowledge, Streptococcus salivarius due to its ability to cause bacteraemia and systemic infection that results in a variety of morbidities, Pseudonocardia autotrophica due to lack of body of knowledge and uncertainty on the safety of biologically active compounds which can be produced, and Pseudomonas fluorescens due to possible safety concerns. info:eu-repo/semantics/publishedVersion
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- 2022
15. Microbiological hazards associated with the use of water in the post‐harvest handling and processing operations of fresh and frozen fruits, vegetables and herbs (ffFVHs). Part 1 (outbreak data analysis, literature review and stakeholder questionnaire)
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Koutsoumanis, Konstantinos, Ordóñez, Avelino Alvarez, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Banach, Jen, Ottoson, Jakob, Zhou, Bin, and da Silva Felício, Maria Teresa
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WATER use ,LITERATURE reviews ,FROZEN fruit ,WATER disinfection ,WATER management ,ORCHARDS ,WATER shortages - Abstract
The contamination of water used in post‐harvest handling and processing operations of fresh and frozen fruit, vegetables and herbs (ffFVHs) is a global concern. The most relevant microbial hazards associated with this water are: Listeria monocytogenes, Salmonella spp., human pathogenic Escherichia coli and enteric viruses, which have been linked to multiple outbreaks associated with ffFVHs in the European Union (EU). Contamination (i.e. the accumulation of microbiological hazards) of the process water during post‐harvest handling and processing operations is affected by several factors including: the type and contamination of the FVHs being processed, duration of the operation and transfer of microorganisms from the product to the water and vice versa, etc. For food business operators (FBOp), it is important to maintain the microbiological quality of the process water to assure the safety of ffFVHs. Good manufacturing practices (GMP) and good hygienic practices (GHP) related to a water management plan and the implementation of a water management system are critical to maintain the microbiological quality of the process water. Identified hygienic practices include technical maintenance of infrastructure, training of staff and cooling of post‐harvest process water. Intervention strategies (e.g. use of water disinfection treatments and water replenishment) have been suggested to maintain the microbiological quality of process water. Chlorine‐based disinfectants and peroxyacetic acid have been reported as common water disinfection treatments. However, given current practices in the EU, evidence of their efficacy under industrial conditions is only available for chlorine‐based disinfectants. The use of water disinfection treatments must be undertaken following an appropriate water management strategy including validation, operational monitoring and verification. During operational monitoring, real‐time information on process parameters related to the process and product, as well as the water and water disinfection treatment(s) are necessary. More specific guidance for FBOp on the validation, operational monitoring and verification is needed. [ABSTRACT FROM AUTHOR]
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- 2023
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16. Statement on how to interpret the QPS qualification on 'acquired antimicrobial resistance genes'.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Suarez, Juan Evaristo, Fernández, Estefania Noriega, and Istace, Frédérique
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DRUG resistance in microorganisms ,GENES - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a regularly updated generic pre‐evaluation of the safety of microorganisms intended for use in the food or feed chains. Safety concerns identified for a taxonomic unit (TU) are, where possible, confirmed at the species/strain or product level and reflected by 'qualifications' which should be assessed at strain and/or product level by EFSA's Scientific Panels. The generic qualification 'the strains should not harbour any acquired antimicrobial resistance (AMR) genes to clinically relevant antimicrobials' applies to all QPS bacterial TUs. The different EFSA risk assessment areas use the same approach to assess the qualification related to AMR genes. In this statement, the terms 'intrinsic' and 'acquired' AMR genes were defined for the purpose of EFSA's risk assessments, and they apply to bacteria used in the food and feed chains. A bioinformatic approach is proposed for demonstrating the 'intrinsic'/'acquired' nature of an AMR gene. All AMR genes that confer resistance towards 'critically important', 'highly important' and 'important' antimicrobials, as defined by the World Health Organisation (WHO), found as hits, need to be considered as hazards (for humans, animals and environment) and need further assessment. Genes identified as responsible for 'intrinsic' resistance could be considered as being of no concern in the frame of the EFSA risk assessment. 'Acquired' AMR genes resulting in a resistant phenotype should be considered as a concern. If the presence of the 'acquired' AMR gene is not leading to phenotypic resistance, further case‐by‐case assessment is necessary. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Salmonella Prophages, Their Propagation, Host Specificity and Antimicrobial Resistance Gene Transduction
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Trofeit, Lisa, primary, Sattler, Elisabeth, additional, Künz, Johannes, additional, and Hilbert, Friederike, additional
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- 2023
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18. Monitoring of Paenibacillus larvae in Lower Austria through DNA-Based Detection without De-Sporulation: 2018 to 2022
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Wilhelm, Elfriede, primary, Korschineck, Irina, additional, Sigmund, Michael, additional, Paulsen, Peter, additional, Hilbert, Friederike, additional, and Rossmanith, Wigbert, additional
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- 2023
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19. Low-Level Tetracycline Resistance Gene tet(O)_3 in Campylobacter jejuni
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Pacífico, Cátia, primary, Wösten, Marc M. S. M., additional, and Hilbert, Friederike, additional
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- 2023
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20. Search strategies for the maintenance and update of list of QPS-recommended biological agents
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EFSA BIOHAZ Panel, Koutsoumanis, Kostas, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barrizzone, Fulvio, Correia, Sandra, Herman, Lieve, Munoz Guajardo, Irene, Da Costa, Irene, Aguillera‐Gomez, Margarita, Aguillera, Jaime, Gelbmann, Wolfgang, Brozzi, Rosella, Bote, Katrin, Heng, Leng, Istace, Frédérique, Richardson, Malcolm, Romero, Patricia, and Rossi, Annamaria
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search strategy ,qualification ,QPS - Abstract
The aim of the Extensive Literature Search (ELS) carried out in response to the terms of reference set out in the EFSA mandate on the Qualified Presumption of safety (QPS), i.e. review of the recommendations for the QPS list and specific qualifications, was to identify any publicly available studies reporting on safety concerns for humans, animals or the environment caused by organisms that have QPS status, since the publication of the previous QPS review in 2016 (i.e. publications from June 2016 to June 2019). The details on the search strategy, search keys and approach are presented here. Notes to the versions: - 27 January 2022 and 25 July 2022: The search strategy has been updated to reflect additions to the QPS list and changes in taxonomy. - 25 January 2023 version is linked to QPS part 17, ON-7746. -10 July 2023 version is linked to QPS part 18, ON-8092, EU; PDF; biohaz@efsa.europa.eu
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- 2023
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21. Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 17: suitability of taxonomic units notified to EFSA until September 2022
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Correia, Sandra, Herman, Lieve, Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
- Subjects
663/664 - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a regularly updated generic pre-evaluation of the safety of microorganisms, intended for use in the food or feed chains, to support the work of EFSA's Scientific Panels. The QPS approach is based on an assessment of published data for each agent, with respect to its taxonomic identity, the body of relevant knowledge and safety concerns. Safety concerns identified for a taxonomic unit (TU) are, where possible, confirmed at the species/strain or product level and reflected by ‘qualifications’. In the period covered by this Statement, new information was found leading to the withdrawal of the qualification ‘absence of aminoglycoside production ability’ for Bacillus velezensis. The qualification for Bacillus paralicheniformis was changed to ‘absence of bacitracin production ability’. For the other TUs, no new information was found that would change the status of previously recommended QPS TUs. Of 52 microorganisms notified to EFSA between April and September 2022 (inclusive), 48 were not evaluated because: 7 were filamentous fungi, 3 were Enterococcus faecium, 2 were Escherichia coli, 1 was Streptomyces spp., and 35 were taxonomic units (TUs) that already have a QPS status. The other four TUs notified within this period, and one notified previously as a different species, which was recently reclassified, were evaluated for the first time for a possible QPS status: Xanthobacter spp. could not be assessed because it was not identified to the species level; Geobacillus thermodenitrificans is recommended for QPS status with the qualification ‘absence of toxigenic activity’. Streptoccus oralis is not recommended for QPS status. Ogataea polymorpha is proposed for QPS status with the qualification ‘for production purposes only’. Lactiplantibacillus argentoratensis (new species) is included in the QPS list. info:eu-repo/semantics/publishedVersion
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- 2023
22. Update of the list of qualified presumption of safety (QPS) recommended microorganisms intentionally added to food or feed as notified to EFSA
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, de Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, Herman, Lieve, Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
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663/664 - Abstract
The qualified presumption of safety (QPS) provides a generic pre-assessment of the safety of microorganisms intended for use in the food or feed chains, to support the work of EFSA’s Scientific Panels. QPS assessment allows a fast track evaluation of strains belonging to QPS taxonomic units (TUs): species for bacteria, yeast, fungi, protists/microalgae and families for viruses. QPS TUs are assessed for their body of knowledge and safety. Safety concerns related to a QPS TU are reflected, when possible, as ‘qualifications’, which should be tested at strain and/or product level. Based on the possession of potentially harmful traits by some strains, filamentous fungi, bacteriophages, oomycetes, streptomycetes, Enterococcus faecium, Escherichia coli and Clostridium butyricum are excluded from the QPS assessment. Between October 2019 and September 2022, 323 notifications of TUs were received, 217 related to feed additives, 54 to food enzymes, food additives and flavourings, 14 to plant protection products and 38 to novel foods. The list of QPS-recommended TUs is reviewed every 6 months following an extensive literature search strategy. Only sporadic infections with a few QPS status TUs in immunosuppressed individuals were identified and the assessment did not change the QPS status of these TUs. The QPS list has been updated in relation to the most recent taxonomic insights and the qualifications were revised and streamlined. The qualification ‘absence of aminoglycoside production ability’ was withdrawn for Bacillus velezensis. Six new TUs received the QPS status: Bacillus paralicheniformis with the qualification ‘absence of toxigenic activity’ and ‘absence of bacitracin production ability’; Bacillus circulans with the qualifications for ‘production purposes only’ and ‘absence of cytotoxic activity’; Haematococcus lacustris (synonym Haematococcus pluvialis) and Ogataea polymorpha, both with the qualification ‘for production purposes only’; Lactiplantibacillus argentoratensis; Geobacillus thermodenitrificans with the qualification ‘absence of toxigenic activity’. info:eu-repo/semantics/publishedVersion
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- 2023
23. Microbiological safety of aged meat
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bover-Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Blagojevic, Bojan, Van Damme, Inge, Hempen, Michaela, Messens, Winy, Bolton, Declan, Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
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663/664 ,Veterinary (miscellaneous) ,Animal Science and Zoology ,Parasitology ,Plant Science ,Microbiology ,Food Science - Abstract
The impact of dry-ageing of beef and wet-ageing of beef, pork and lamb on microbiological hazards and spoilage bacteria was examined and current practices are described. As ‘standard fresh’ and wet-aged meat use similar processes these were differentiated based on duration. In addition to a description of the different stages, data were collated on key parameters (time, temperature, pH and aw) using a literature survey and questionnaires. The microbiological hazards that may be present in all aged meats included Shiga toxin-producing Escherichia coli (STEC), Salmonella spp., Staphylococcus aureus, Listeria monocytogenes, enterotoxigenic Yersinia spp., Campylobacter spp. and Clostridium spp. Moulds, such as Aspergillus spp. and Penicillium spp., may produce mycotoxins when conditions are favourable but may be prevented by ensuring a meat surface temperature of −0.5 to 3.0°C, with a relative humidity (RH) of 75–85% and an airflow of 0.2–0.5 m/s for up to 35 days. The main meat spoilage bacteria include Pseudomonas spp., Lactobacillus spp. Enterococcus spp., Weissella spp., Brochothrix spp., Leuconostoc spp., Lactobacillus spp., Shewanella spp. and Clostridium spp. Under current practices, the ageing of meat may have an impact on the load of microbiological hazards and spoilage bacteria as compared to standard fresh meat preparation. Ageing under defined and controlled conditions can achieve the same or lower loads of microbiological hazards and spoilage bacteria than the variable log10 increases predicted during standard fresh meat preparation. An approach was used to establish the conditions of time and temperature that would achieve similar or lower levels of L. monocytogenes and Yersinia enterocolitica (pork only) and lactic acid bacteria (representing spoilage bacteria) as compared to standard fresh meat. Finally, additional control activities were identified that would further assure the microbial safety of dry-aged beef, based on recommended best practice and the outputs of the equivalence assessment. info:eu-repo/semantics/publishedVersion
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- 2023
24. Transmission of antimicrobial resistance (AMR) during animal transport
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Argüello-Rodríguez, Héctor, Dohmen, Wietske, Francesca Magistrali, Chiara, Padalino, Barbara, Tenhagen, Bernd-Alois, Threlfall, John, García-Fierro, Raquel, Guerra, Beatriz, Liébana, Ernesto, Stella, Pietro, Peixe, Luisa, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis, K, Allende, A, Alvarez-Ordonez, A, Bolton, D, Bover-Cid, S, Chemaly, M, Davies, R, De Cesare, A, Herman, L, Hilbert, F, Lindqvist, R, Nauta, M, Ru, G, Simmons, M, Skandamis, P, Suffredini, E, Arguello-Rodriguez, H, Dohmen, W, Magistrali, CF, Padalino, B, Tenhagen, BA, Threlfall, J, Garcia-Fierro, R, Guerra, B, Liebana, E, Stella, P, and Peixe, L
- Subjects
663/664 ,Veterinary (miscellaneous) ,data gaps ,food-producing animals ,Plant Science ,mitigation option ,Microbiology ,antimicrobial-resistant bacteria (ARB) ,lairage ,food-producing animal ,research needs ,risk factor ,mitigation options ,veterinary (miscalleneous) ,data gap ,risk factors ,Animal Science and Zoology ,Parasitology ,antimicrobial resistance genes (ARGs) ,Food Science - Abstract
The transmission of antimicrobial resistance (AMR) between food-producing animals (poultry, cattle and pigs) during short journeys ( 8 h) directed to other farms or to the slaughterhouse lairage (directly or with intermediate stops at assembly centres or control posts, mainly transported by road) was assessed. Among the identified risk factors contributing to the probability of transmission of antimicrobial-resistant bacteria (ARB) and antimicrobial resistance genes (ARGs), the ones considered more important are the resistance status (presence of ARB/ARGs) of the animals pre-transport, increased faecal shedding, hygiene of the areas and vehicles, exposure to other animals carrying and/or shedding ARB/ARGs (especially between animals of different AMR loads and/or ARB/ARG types), exposure to contaminated lairage areas and duration of transport. There are nevertheless no data whereby differences between journeys shorter or longer than 8 h can be assessed. Strategies that would reduce the probability of AMR transmission, for all animal categories include minimising the duration of transport, proper cleaning and disinfection, appropriate transport planning, organising the transport in relation to AMR criteria (transport logistics), improving animal health and welfare and/or biosecurity immediately prior to and during transport, ensuring the thermal comfort of the animals and animal segregation. Most of the aforementioned measures have similar validity if applied at lairage, assembly centres and control posts. Data gaps relating to the risk factors and the effectiveness of mitigation measures have been identified, with consequent research needs in both the short and longer term listed. Quantification of the impact of animal transportation compared to the contribution of other stages of the food-production chain, and the interplay of duration with all risk factors on the transmission of ARB/ARGs during transport and journey breaks, were identified as urgent research needs. info:eu-repo/semantics/publishedVersion
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- 2022
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25. Assessment of animal diseases caused by bacteria resistant to antimicrobials : kept fish species
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EFSA Panel on Animal Health and Welfare (AHAW), Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Romalde, Jesús L, Smith, Peter, Baldinelli, Francesca, Kohnle, Lisa, Alvarez, Julio, Producció Animal, Benestar Animal, Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Lui, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Han, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Romalde, Jesús L, Smith, Peter, Baldinelli, Francesca, Kohnle, Lisa, and Alvarez, Julio
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fish ,EPIDEMIOLOGIC CUTOFF VALUES ,animal diseases ,Veterinary (miscellaneous) ,review ,FLAVOBACTERIUM-COLUMNARE ,ANTIBIOTIC-RESISTANCE ,Plant Science ,AEROMONAS-SALMONICIDA ,SUSCEPTIBILITY ,Microbiology ,extensive literature ,Scientific Opinion ,Animal Health Law ,Animal Science and Zoology ,Parasitology ,Veterinary Sciences ,antimicrobial resistance ,AGENTS ,extensive literature review ,Food Science - Abstract
In this Opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to the health of certain kept fish species have been assessed. Atlantic salmon (Salmo salar), carp (Cyprinus spp.), rainbow trout (Oncorhynchus mykiss), sea bream (Sparus aurata) and tilapia (Oreochromis spp.), selected as representative of the most important fish species and production systems that are commercially reared in fresh and saltwater farms, were the focus of this assessment. The assessment was performed following a methodology based on information collected by an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate Opinion. The global state of play of antimicrobial resistance in Aeromonas hydrophila, Aeromonas salmonicida, Flavobacterium psychrophilum and Flavobacterium columnare is provided. Among these bacteria, none was identified as being among the most relevant antimicrobial-resistant bacteria in the assessed kept fish species in the EU due to the very limited scientific evidence available. info:eu-repo/semantics/publishedVersion
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- 2022
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26. The efficacy and safety of high-pressure processing of food
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EFSA Panel on Biological Hazards (BIOHAZ Panel), Koutsoumanis, Konstantinos, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Castle, Laurence, Crotta, Matteo, Grob, Konrad, Milana, Maria Rosaria, Petersen, Annette, Roig Sagués, Artur Xavier, Vinagre Silva, Filipa, Barthélémy, Eric, Christodoulidou, Anna, Messens, Winy, Allende, Ana, Koutsoumanis, Konstantino, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagioti, Suffredini, Elisabetta, Castle, Laurence, Crotta, Matteo, Grob, Konrad, Milana, Maria Rosaria, Petersen, Annette, Roig Sagués, Artur Xavier, Vinagre Silva, Filipa, Barthélémy, Eric, Christodoulidou, Anna, Messens, Winy, Allende, Ana, Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
- Subjects
high-pressure processing ,milk ,663/664 ,Veterinary (miscellaneous) ,food ,safetyconcern ,Plant Science ,safety concern ,Microbiology ,ready-to-eat products ,High‐pressure processing ,Animal Science and Zoology ,Parasitology ,ready‐to‐eat product ,microbial inactivation ,Food Science - Abstract
High-pressure processing (HPP) is a non-thermal treatment in which, for microbial inactivation, foods are subjected to isostatic pressures (P) of 400–600 MPa with common holding times (t) from 1.5 to 6 min. The main factors that influence the efficacy (log10 reduction of vegetative microorganisms) of HPP when applied to foodstuffs are intrinsic (e.g. water activity and pH), extrinsic (P and t) and microorganism-related (type, taxonomic unit, strain and physiological state). It was concluded that HPP of food will not present any additional microbial or chemical food safety concerns when compared to other routinely applied treatments (e.g. pasteurisation). Pathogen reductions in milk/colostrum caused by the current HPP conditions applied by the industry are lower than those achieved by the legal requirements for thermal pasteurisation. However, HPP minimum requirements (P/t combinations) could be identified to achieve specific log10 reductions of relevant hazards based on performance criteria (PC) proposed by international standard agencies (5–8 log10 reductions). The most stringent HPP conditions used industrially (600 MPa, 6 min) would achieve the above-mentioned PC, except for Staphylococcus aureus. Alkaline phosphatase (ALP), the endogenous milk enzyme that is widely used to verify adequate thermal pasteurisation of cows’ milk, is relatively pressure resistant and its use would be limited to that of an overprocessing indicator. Current data are not robust enough to support the proposal of an appropriate indicator to verify the efficacy of HPP under the current HPP conditions applied by the industry. Minimum HPP requirements to reduce Listeria monocytogenes levels by specific log10 reductions could be identified when HPP is applied to ready-to-eat (RTE) cooked meat products, but not for other types of RTE foods. These identified minimum requirements would result in the inactivation of other relevant pathogens (Salmonella and Escherichia coli) in these RTE foods to a similar or higher extent. info:eu-repo/semantics/publishedVersion
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- 2022
27. Assessment on the efficacy of methods 2 to 5 and method 7 set out in Commission Regulation (EU) No 142/2011 to inactivate relevant pathogens when producing processed animal protein of porcine origin intended to feed poultry and aquaculture animals.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez Ordoñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luisa, Skandamis, Panagiotis, Suffredini, Elisabetta, Fernandez Escamez, Pablo, Gonzales‐Barron, Ursula, Roberts, Helen, Ru, Giuseppe, Simmons, Marion, and Cruz, Ruben Barcia
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POULTRY farms ,CLOSTRIDIUM perfringens ,ENTEROCOCCUS faecalis ,PATHOGENIC microorganisms ,PARVOVIRUSES ,SPORES - Abstract
An assessment was conducted on the level of inactivation of relevant pathogens that could be present in processed animal protein of porcine origin intended to feed poultry and aquaculture animals when methods 2 to 5 and method 7, as detailed in Regulation (EU) No 142/2011, are applied. Five approved scenarios were selected for method 7. Salmonella Senftenberg, Enterococcus faecalis, spores of Clostridium perfringens and parvoviruses were shortlisted as target indicators. Inactivation parameters for these indicators were extracted from extensive literature search and a recent EFSA scientific opinion. An adapted Bigelow model was fitted to retrieved data to estimate the probability that methods 2 to 5, in coincidental and consecutive modes, and the five scenarios of method 7 are able to achieve a 5 log10 and a 3 log10 reduction of bacterial indicators and parvoviruses, respectively. Spores of C. perfringens were the indicator with the lowest probability of achieving the target reduction by methods 2 to 5, in coincidental and consecutive mode, and by the five considered scenarios of method 7. An expert knowledge elicitation was conducted to estimate the certainty of achieving a 5 log10 reduction of spores of C. perfringens considering the results of the model and additional evidence. A 5 log10 reduction of C. perfringens spores was judged: 99–100% certain for methods 2 and 3 in coincidental mode; 98–100% certain for method 7 scenario 3; 80–99% certain for method 5 in coincidental mode; 66–100% certain for method 4 in coincidental mode and for method 7 scenarios 4 and 5; 25–75% certain for method 7 scenario 2; and 0–5% certain for method 7 scenario 1. Higher certainty is expected for methods 2 to 5 in consecutive mode compared to coincidental mode. [ABSTRACT FROM AUTHOR]
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- 2023
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28. Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 18: Suitability of taxonomic units notified to EFSA until March 2023.
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Nonno, Romolo, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, and Querol, Amparo
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PSEUDOMONAS stutzeri ,ENTEROCOCCUS faecium ,FEED additives ,FOOD additives ,FILAMENTOUS fungi - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a regularly updated generic pre‐evaluation of the safety of microorganisms, intended for use in the food or feed chains, to support the work of EFSA's Scientific Panels. The QPS approach is based on an assessment of published data for each agent, with respect to its taxonomic identity, the body of relevant knowledge and safety concerns. Safety concerns identified for a taxonomic unit (TU) are, where possible, confirmed at the species/strain or product level and reflected by 'qualifications'. In the period covered by this Statement, no new information was found that would change the status of previously recommended QPS TUs. Of 38 microorganisms notified to EFSA between October 2022 and March 2023 (inclusive) (28 as feed additives, 5 as food enzymes, food additives and flavourings, 5 as novel foods), 34 were not evaluated because: 8 were filamentous fungi, 4 were Enterococcus faecium and 2 were Escherichia coli (taxonomic units that are excluded from the QPS evaluation) and 20 were taxonomic units (TUs) that already have a QPS status. Three of the other four TUs notified within this period were evaluated for the first time for a possible QPS status: Anaerobutyricum soehngenii, Stutzerimonas stutzeri (former Pseudomonas stutzeri) and Nannochloropsis oculata. Microorganism strain DSM 11798 has also been notified in 2015 and as its taxonomic unit is notified as a strain not a species, it is not suitable for the QPS approach. A. soehngenii and N. oculata are not recommended for the QPS status due to a limited body of knowledge of its use in the food and feed chains. S. stutzeri is not recommended for inclusion in the QPS list based on safety concerns and limited information about the exposure of animals and humans through the food and feed chains. [ABSTRACT FROM AUTHOR]
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- 2023
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29. Updated list of QPS-recommended biological agents for safety risk assessments carried out by EFSA
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EFSA BIOHAZ Panel, Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suárez Fernández, Juan Evaristo, Sundh, Ingvar, Vlak, Just M., Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, Herman, Lieve, EFSA BIOHAZ Panel, Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suárez Fernández, Juan Evaristo, Sundh, Ingvar, Vlak, Just M., Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, and Herman, Lieve
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The “list of microorganisms with QPS status” first established in 2007, has been revised and updated annually until 2014 via QPS Opinions; since 2014 the updates are carried out and published every 3 years. If new information is retrieved from extended literature searches (ELS) that would change the QPS status of a TU or its qualifications, this is also published in the Panel Statement covering the previous 6-months period. The ELS protocol can be found at https://doi.org/10.5281/zenodo.3607190 and the Search strategies are available at: https://doi.org/10.5281/zenodo.3607193. The QPS Panel Statement also includes the evaluation of microbiological agents notified to EFSA within the 6-month period for an assessment for feed additives, food enzymes, food additives and flavourings, and novel foods or plant protection products for a possible QPS status. The new QPS status recommendations are incorporated into the 2019 updated “list of microorganisms with QPS status” is available in this upload. The list of “Microbiological agents as notified to EFSA” from 2007, in the context of technical dossiers to EFSA Units, for intentional use in feed and/or food or as sources of food and feed additives, enzymes and plant protection products (PPPs) for safety assessment can be found at https://doi.org/10.5281/zenodo.3607184.
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- 2022
30. Microbiological agents as notified to EFSA
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EFSA BIOHAZ Panel, Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suárez Fernández, Juan Evaristo, Sundh, Ingvar, Vlak, Just M., Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, Herman, Lieve, EFSA BIOHAZ Panel, Koutsoumanis, Konstantinos, Allende, Ana, Álvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Suárez Fernández, Juan Evaristo, Sundh, Ingvar, Vlak, Just M., Barizzone, Fulvio, Hempen, Michaela, Correia, Sandra, and Herman, Lieve
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- 2022
31. Assessment of animal diseases caused by bacteria resistant to antimicrobials: kept fish species
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EFSA Panel on Animal Health and Welfare, Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Romalde, Jesús L, Smith, Peter, Baldinelli, Francesca, Kohnle, Lisa, Alvarez, Julio, EFSA Panel on Animal Health and Welfare, Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Romalde, Jesús L, Smith, Peter, Baldinelli, Francesca, Kohnle, Lisa, and Alvarez, Julio
- Abstract
In this Opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to the health of certain kept fish species have been assessed. Atlantic salmon (Salmo salar), carp (Cyprinus spp.), rainbow trout (Oncorhynchus mykiss), sea bream (Sparus aurata) and tilapia (Oreochromis spp.), selected as representative of the most important fish species and production systems that are commercially reared in fresh and saltwater farms, were the focus of this assessment. The assessment was performed following a methodology based on information collected by an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate Opinion. The global state of play of antimicrobial resistance in Aeromonas hydrophila, Aeromonas salmonicida, Flavobacterium psychrophilum and Flavobacterium columnare is provided. Among these bacteria, none was identified as being among the most relevant antimicrobial-resistant bacteria in the assessed kept fish species in the EU due to the very limited scientific evidence available.
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- 2022
32. TIERÄRZTLICHE GEGENWARTSKUNST, LITERATUR UND MUSIK.
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HILBERT, FRIEDERIKE
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- 2024
33. Monitoring of chronic wasting disease (CWD) (IV).
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordoñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Skandamis, Panagiotis, Suffredini, Elisabetta, Miller, Michael W, Mysterud, Atle, Nöremark, Maria, Simmons, Marion, and Tranulis, Michael A
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CHRONIC wasting disease ,ROADKILL ,RED deer ,AGE differences ,REINDEER ,WATCHFUL waiting - Abstract
The European Commission requested an analysis of the Chronic Wasting Disease (CWD) monitoring programme in Norway, Sweden, Finland, Iceland, Estonia, Latvia, Lithuania and Poland (9 January 2017–28 February 2022). Thirteen cases were detected in reindeer, 15 in moose and 3 in red deer. They showed two phenotypes, distinguished by the presence or absence of detectable disease‐associated normal cellular prion protein (PrP) in lymphoreticular tissues. CWD was detected for the first time in Finland, Sweden and in other areas of Norway. In countries where the disease was not detected, the evidence was insufficient to rule out its presence altogether. Where cases were detected, the prevalence was below 1%. The data also suggest that the high‐risk target groups for surveillance should be revised, and 'road kill' removed. Data show that, in addition to differences in age and sex, there are differences in the prion protein gene (PRNP) genotypes between positive and negative wild reindeer. A stepwise framework has been proposed with expanded minimum background surveillance to be implemented in European countries with relevant cervid species. Additional surveillance may include ad hoc surveys for four different objectives, specific to countries with/without cases, focusing on parallel testing of obex and lymph nodes from adult cervids in high‐risk target groups, sustained over time, using sampling units and a data‐driven design prevalence. Criteria for assessing the probability of CWD presence have been outlined, based on the definition of the geographical area, an annual assessment of risk of introduction, sustained minimum background surveillance, training and engagement of stakeholders and a surveillance programme based on data‐driven parameters. All positive cases should be genotyped. Sample sizes for negative samples have been proposed to detect and estimate the frequency of PRNP polymorphisms. Double‐strand sequencing of the entire PRNP open reading frame should be undertaken for all selected samples, with data collated in a centralised collection system at EU level. [ABSTRACT FROM AUTHOR]
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- 2023
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34. Protocol for Extensive literature search (ELS) for the maintenance and update of list of QPS-recommended biological agents
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EFSA BIOHAZ Panel, Koutsoumanis, Kostas, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, Sijtsma, Lolke, Suarez, Juan Evaristo, Sundh, Ingvar, Vlak, Just, Barrizzone, Fulvio, Correia, Sandra, Herman, Lieve, Aguillera‐Gomez, Margarita, Aguillera, Jaime, Gelbmann, Wolfgang, Brozzi, Rosella, Bote, Katrin, Heng, Leng, Istace, Frédérique, Richardson, Malcolm, Romero, Patricia, Rossi, Annamaria, Munoz Guajardo, Irene, and Da Costa, Irene
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extensive literature search ,protocol ,QPS - Abstract
Protocol for Extensive literature search (ELS), relevance screening and article evaluation for the maintenance and update of list of QPS-recommended biological agents intentionally added to food an feed An ELS of studies related to safety concerns for humans, animals, plants and/or the environment of microorganisms recommended for the Qualified Presumption of Safety (QPS) 2019 list will be performed. The process will be performed according to the following main steps: ELS for potentially relevant citations; Relevance screening to select the citations identified by the literature search, based on titles and abstract and then full text; Evaluation of articles according to pre-specified categories of possible safety concerns; Discussion between experts to come to collective expert evaluation of the outcome, reflected in the QPS Opinion and Panel Statements. Considering the purpose of the QPS approach, a broad search will be performed. The review questions will be broken down into key elements using the PECO conceptual model: Population of interest (P) Exposure of interest (E) Comparator (C) Outcomes of interest (O). Notes: - to 27 January 2022 version: The protocol has been updated to reflect additions to the QPS list and changes in taxonomy. - to 25 Jan. 2023 version: protocol related to QPS Part 17, ON-7746. - to 10 July 2023 version: protocol related to QPS Part 18, ON-8092., EU; PDF; biohaz@efsa.europa.eu
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- 2022
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35. Update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA 15: suitability of taxonomic units notified to EFSA until September 2021
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Kostas, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Prieto-Maradona, Miguel, Querol, Amparo, Sijtsma, Lolke, Evaristo Suarez, Juan, Sundh, Ingvar, Vlak, Just, Barizzone, Fulvio, Hempen, Michaela, Herman, Lieve, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis K., Allende A., Alvarez-Ordonez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Hilbert F., Lindqvist R., Nauta M., Peixe L., Ru G., Simmons M., Skandamis P., Suffredini E., Cocconcelli P.S., Fernandez Escamez P.S., Prieto-Maradona M., Querol A., Sijtsma L., Evaristo Suarez J., Sundh I., Vlak J., Barizzone F., Hempen M., and Herman L.
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663/664 ,Aurantiochytrium mangrovei ,Nutrition. Foods and food supply ,Veterinary (miscellaneous) ,Chemical technology ,Haematococcus lacustris ,Plant Science ,TP1-1185 ,Microbiology ,QPS ,Paenibacillus lentu ,Haematococcus lacustri ,Enterococcus lactis ,Schizochytrium aggregatum ,Animal Science and Zoology ,Parasitology ,TX341-641 ,Statement ,Paenibacillus lentus ,Chlamydomonas reinhardtii ,Food Science ,Enterococcus lacti - Abstract
The qualified presumption of safety (QPS) approach was developed to provide a generic pre-evaluation of the safety of biological agents. The QPS approach is based on an assessment of published data for each agent, with respect to its taxonomic identity, the body of relevant knowledge and safety concerns. Safety concerns are, where possible, confirmed at the species/strain or product level and reflected by ‘qualifications’. The QPS list was updated in relation to the revised taxonomy of the genus Bacillus, to synonyms of yeast species and for the qualifications ‘absence of resistance to antimycotics’ and ‘only for production purposes’. Lactobacillus cellobiosus has been reclassified as Limosilactobacillus fermentum. In the period covered by this statement, no new information was found that would change the status of previously recommended QPS taxonomic units (TU)s. Of the 70 microorganisms notified to EFSA, 64 were not evaluated: 11 filamentous fungi, one oomycete, one Clostridium butyricum, one Enterococcus faecium, five Escherichia coli, one Streptomyces sp., one Bacillus nakamurai and 43 TUs that already had a QPS status. Six notifications, corresponding to six TUs were evaluated: Paenibacillus lentus was reassessed because an update was requested for the current mandate. Enterococcus lactis synonym Enterococcus xinjiangensis, Aurantiochytrium mangrovei synonym Schizochytrium mangrovei, Schizochytrium aggregatum, Chlamydomonas reinhardtii synonym Chlamydomonas smithii and Haematococcus lacustris synonym Haematococcus pluvialis were assessed for the first time. The following TUs were not recommended for QPS status: P. lentus due to a limited body of knowledge, E. lactis synonym E. xinjiangensis due to potential safety concerns, A. mangrovei synonym S. mangrovei, S. aggregatum and C. reinhardtii synonym C. smithii, due to lack of a body of knowledge on its occurrence in the food and feed chain. H. lacustris synonym H. pluvialis is recommended for QPS status with the qualification ‘for production purposes only’. info:eu-repo/semantics/publishedVersion
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- 2022
36. Assessment of animal diseases caused by bacteria resistant to antimicrobials: Swine
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EFSA Panel on Animal Health and Welfare, Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Sihvonen, Liisa Helena, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Baldinelli, Francesca, Alvarez, Julio, Producció Animal, Benestar Animal, Nielsen S.S., Bicout D.J., Calistri P., Canali E., Drewe J.A., Garin-Bastuji B., Gonzales Rojas J.L., Gortazar Schmidt C., Herskin M., Michel V., Miranda Chueca M.A., Padalino B., Pasquali P., Roberts H.C., Sihvonen L.H., Spoolder H., Stahl K., Velarde A., Viltrop A., Winckler C., Dewulf J., Guardabassi L., Hilbert F., Mader R., Baldinelli F., and Alvarez J.
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animal health law ,pig ,Veterinary (miscellaneous) ,BRACHYSPIRA-HYODYSENTERIAE ,TP1-1185 ,Plant Science ,SUSCEPTIBILITY ,Microbiology ,TX341-641 ,PIGS ,Veterinary Sciences ,antimicrobial resistance ,extensive literature review ,Nutrition. Foods and food supply ,Chemical technology ,ANTIBIOTIC-RESISTANCE ,swine ,Plan9741 ,Scientific Opinion ,ESCHERICHIA-COLI ,PATTERNS ,Animal Science and Zoology ,Parasitology ,Food Science - Abstract
In this opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to the health of pigs have been assessed. The assessment has been performed following a methodology based on information collected by an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate opinion. A global state of play of antimicrobial resistant Escherichia coli, Streptococcus suis, Actinobacillus pleuropneumoniae, Pasteurella multocida, Glaeserella parasuis, Bordetella bronchiseptica, Staphylococcus aureus, Staphylococcus hyicus, Brachyspira hyodysenteriae, Trueperella pyogenes, Erysipelothrix rhusiopathiae, Streptococcus dysgalactiae, Mycoplasma hyosynoviae, Mycoplasma hyorhinis, Mycoplasma hyopneumoniae and Brachyspira pilosicoli has been provided. Among those bacteria, EFSA identified E. coli and B. hyodysenteriae with > 66% certainty as being the most relevant antimicrobial resistant bacteria in the EU based on the available evidence. The animal health impact of these most relevant bacteria, as well as their eligibility for being listed and categorised within the animal health law framework will be assessed in separate scientific opinions. info:eu-repo/semantics/publishedVersion
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- 2021
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37. Assessment of animal diseases caused by bacteria resistant to antimicrobials: Horses
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EFSA Panel on Animal Health and Welfare (AHAW), Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Sihvonen, Liisa Helena, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Baldinelli, Francesca, Alvarez, Julio, Producció Animal, Benestar Animal, Nielsen S.S., Bicout D.J., Calistri P., Canali E., Drewe J.A., Garin-Bastuji B., Gonzales Rojas J.L., Gortazar Schmidt C., Herskin M., Michel V., Miranda Chueca M.A., Padalino B., Pasquali P., Roberts H.C., Sihvonen L.H., Spoolder H., Stahl K., Velarde A., Viltrop A., Winckler C., Dewulf J., Guardabassi L., Hilbert F., Mader R., Baldinelli F., and Alvarez J.
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animal health law ,Nutrition. Foods and food supply ,Veterinary (miscellaneous) ,Chemical technology ,review ,Anim7316 ,Plant Science ,TP1-1185 ,bacterial infections and mycoses ,Microbiology ,horse ,extensive literature ,Scientific Opinion ,bacteria ,Animal Science and Zoology ,Parasitology ,TX341-641 ,Veterinary Sciences ,antimicrobial resistance ,SPP ,extensive literature review ,Food Science - Abstract
In this opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to the health of horses have been assessed. The assessment has been performed following a methodology composed of information collected via an extensive literature review and expert judgement. Details on the methodology used for this assessment are explained in a separate opinion. A global state of play of antimicrobial-resistant Actinobacillus equuli, Dermatophilus congolensis, Enterococcus spp., Escherichia coli, Klebsiella pneumoniae, Pasteurella spp., Pseudomonas aeruginosa, Rhodococcus equi, Staphylococcus aureus and Streptococcus dysgalactiae subsp. dysgalactiae/equisimilis and Streptococcus equi subsp. equi and subsp. zooepidemicus has been provided. Among those bacteria, EFSA identified E. coli, Staphylococcus aureus and R. equi with more than 66% certainty as the most relevant antimicrobial-resistant bacteria in the EU, given their importance as causative agents of clinical disease in horses and the significant levels of resistance to clinically relevant antimicrobials. The animal health impact of these ‘most relevant’ bacteria as well as their eligibility of being listed and categorised within the animal health law framework will be assessed in separate scientific opinions. info:eu-repo/semantics/publishedVersion
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- 2021
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38. Assessment of animal diseases caused by bacteria resistant to antimicrobials: cattle
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EFSA Panel on Animal Health and Welfare (AHAW), Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Baldinelli, Francesca, Alvarez, Julio, Producció Animal, Benestar Animal, Nielsen S.S., Bicout D.J., Calistri P., Canali E., Drewe J.A., Garin-Bastuji B., Gonzales Rojas J.L., Gortazar Schmidt C., Herskin M., Michel V., Miranda Chueca M.A., Padalino B., Pasquali P., Roberts H.C., Spoolder H., Stahl K., Velarde A., Viltrop A., Winckler C., Dewulf J., Guardabassi L., Hilbert F., Mader R., Baldinelli F., and Alvarez J.
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animal health law ,FEEDLOT CATTLE ,Veterinary (miscellaneous) ,MANNHEIMIA-HAEMOLYTICA ,review ,Plant Science ,TP1-1185 ,SUSCEPTIBILITY ,Microbiology ,MASTITIS ,TX341-641 ,Veterinary Sciences ,antimicrobial resistance ,extensive literature review ,DAIRY-COWS ,Nutrition. Foods and food supply ,Chemical technology ,Anim7316 ,STAPHYLOCOCCUS-AUREUS STRAINS ,STREPTOCOCCUS-UBERIS ,extensive literature ,Scientific Opinion ,BOVINE RESPIRATORY-DISEASE ,PASTEURELLA-MULTOCIDA ,cattle ,Animal Science and Zoology ,Parasitology ,Food Science ,ARCANOBACTERIUM-PYOGENES - Abstract
In this opinion, the antimicrobial resistant bacteria responsible for transmissible diseases that constitute a threat to the health of cattle have been assessed. The assessment has been performed following a methodology based on information collected by an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate opinion. A global state of play on antimicrobial resistance in clinical isolates of Escherichia coli (non-VTEC), Klebsiella pneumoniae, Staphylococcus aureus, Streptococcus uberis, Streptococcus dysgalactiae, Pasteurella multocida, Mannheimia haemolytica, Histophilus somni, Mycoplasma bovis, Moraxella bovis, Fusobacterium necrophorum and Trueperella pyogenes is provided. Among those bacteria, EFSA identified E. coli and S. aureus with ≥ 66% certainty as being the most relevant antimicrobial resistant bacteria in cattle in the EU based on the available evidence. The animal health impact of these most relevant bacteria, as well as their eligibility for being listed and categorised within the animal health law framework will be assessed in separate scientific opinions. info:eu-repo/semantics/publishedVersion
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- 2021
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39. Assessment of animal diseases caused by bacteria resistant to antimicrobials: rabbits
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EFSA Panel on Animal Health and Welfare, Nielsen, Søren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Gonzales Rojas, Jose Luis, Gortazar Schmidt, Christian, Herskin, Mette, Michel, Virginie, Miranda Chueca, Miguel Angel, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Baldinelli, Francesca, Alvarez, Julio, Nielsen S.S., Bicout D.J., Calistri P., Canali E., Drewe J.A., Garin-Bastuji B., Gonzales Rojas J.L., Gortazar Schmidt C., Herskin M., Michel V., Miranda Chueca M.A., Padalino B., Pasquali P., Roberts H.C., Spoolder H., Stahl K., Velarde A., Viltrop A., Winckler C., Dewulf J., Guardabassi L., Hilbert F., Mader R., Baldinelli F., Alvarez J., Producció Animal, and Benestar Animal
- Subjects
rabbits ,Nutrition. Foods and food supply ,Chemical technology ,Veterinary (miscellaneous) ,TP1-1185 ,Plant Science ,Microbiology ,Scientific Opinion ,Animal Health Law ,TX341-641 ,Animal Science and Zoology ,Parasitology ,antimicrobial resistance ,extensive literature review ,Food Science - Abstract
In this opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to the health of farmed rabbits have been assessed. The assessment has been performed following a methodology based on information collected through an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate opinion. A global state of play on antimicrobial resistance in clinical isolates of Pasteurella multocida, Staphylococcus aureus, Pseudomonas aeruginosa, Escherichia coli, Bordetella bronchiseptica, Clostridium difficile, Clostridium perfringens and Clostridium spiroforme is provided. Among these bacteria, none were identified as being the most relevant antimicrobial-resistant bacteria in rabbits in the EU due to the very limited scientific evidence available. info:eu-repo/semantics/publishedVersion
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- 2021
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40. Assessment of animal diseases caused by bacteria resistant to antimicrobials: Poultry
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Nielsen, Soren Saxmose, Bicout, Dominique Joseph, Calistri, Paolo, Canali, Elisabetta, Drewe, Julian Ashley, Garin-Bastuji, Bruno, Rojas, Jose Luis Gonzales, Schmidt, Christian Gortazar, Herskin, Mette, Michel, Virginie, Chueca, Miguel Angel Miranda, Padalino, Barbara, Pasquali, Paolo, Roberts, Helen Clare, Spoolder, Hans, Stahl, Karl, Velarde, Antonio, Viltrop, Arvo, Winckler, Christoph, Dewulf, Jeroen, Guardabassi, Luca, Hilbert, Friederike, Mader, Rodolphe, Baldinelli, Francesca, Alvarez, Julio, EFSA Panel Anim Hlth Welf AHAW, for the, Producció Animal, Benestar Animal, Nielsen S.S., Bicout D.J., Calistri P., Canali E., Drewe J.A., Garin-Bastuji B., Gonzales Rojas J.L., Gortazar Schmidt C., Herskin M., Michel V., Miranda Chueca M.A., Padalino B., Pasquali P., Roberts H.C., Spoolder H., Stahl K., Velarde A., Viltrop A., Winckler C., Dewulf J., Guardabassi L., Hilbert F., Mader R., Baldinelli F., and Alvarez J.
- Subjects
Veterinary (miscellaneous) ,review ,TP1-1185 ,Plant Science ,SUSCEPTIBILITY ,PHENOTYPE ,Microbiology ,Animal Health Law ,TX341-641 ,Veterinary Sciences ,antimicrobial resistance ,Pesticides ,extensive literature review ,INTEGRONS ,CHICKENS ,Nutrition. Foods and food supply ,HEBEI ,Chemical technology ,poultry ,GENOTYPE ,extensive literature ,Scientific Opinion ,PASTEURELLA-MULTOCIDA ,PATHOGENIC ESCHERICHIA-COLI ,AVIBACTERIUM-PARAGALLINARUM ,Animal Science and Zoology ,Parasitology ,Food Science - Abstract
In this opinion, the antimicrobial-resistant bacteria responsible for transmissible diseases that constitute a threat to poultry health have been assessed. The assessment has been performed following a methodology based on information collected by an extensive literature review and expert judgement. Details of the methodology used for this assessment are explained in a separate opinion. A global state of play is provided for: Avibacterium (Haemophilus) paragallinarum, Bordetella avium, Clostridium perfringens, Enterococcus faecalis and Enterococcus cecorum, Erysipelothrix rhusiopathiae, Escherichia coli, Gallibacterium spp., Mycoplasma synoviae, Ornithobacterium rhinotracheale, Pasteurella multocida, Riemerella anatipestifer and Staphylococcus aureus. Among those bacteria, EFSA identified Escherichia coli, Enterococcus faecalis and Enterococcus cecorum with ≥ 66% certainty as being the most relevant antimicrobial resistant bacteria in the EU based on the available evidence. The animal health impact of these most relevant bacteria, and their eligibility for being listed and categorised within the Animal Health Law Framework, will be assessed in separate scientific opinions. info:eu-repo/semantics/publishedVersion
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- 2021
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41. Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 9: Polymyxins: colistin
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I., Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis K., Allende A., Alvarez-Ordoñez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., and Peixe L.
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663/664 ,medicine.drug_class ,Veterinary (miscellaneous) ,Polymyxin ,Growth promotion ,TP1-1185 ,Plant Science ,Biology ,Microbiology ,Non target ,Antibiotic resistance ,growth promotion ,medicine ,TX341-641 ,antimicrobial resistance ,colistin ,yield increase ,Animal health ,Nutrition. Foods and food supply ,business.industry ,Chemical technology ,sub-inhibitory concentration ,sub‐inhibitory concentration ,Contamination ,Feed Antimicrobial Resistance Selection Concentration (FARSC) ,Antimicrobial ,food-producing animal ,Biotechnology ,Colistin ,Animal Science and Zoology ,Parasitology ,business ,Food Science ,medicine.drug - Abstract
The specific concentrations of colistin in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. However, due to the lack of data on the parameters required to calculate the FARSC, it was not possible to conclude the assessment until further experimental data become available. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. Levels of colistin in feed that showed to have an effect on growth promotion/increased yield were reported. It was recommended to carry out studies to generate the data that are required to fill the gaps which prevented the calculation of the FARSC for these antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
42. Maximum levels of cross-contamination for 24 antimicrobial active substances in non-target feed. Part 13: Diaminopyrimidines: trimethoprim
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I., Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis K., Allende A., Alvarez-Ordoñez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., and Peixe L.
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Complete data ,663/664 ,Veterinary (miscellaneous) ,Growth promotion ,TP1-1185 ,Plant Science ,Biology ,Microbiology ,Trimethoprim ,Non target ,Antibiotic resistance ,growth promotion ,medicine ,TX341-641 ,antimicrobial resistance ,yield increase ,Animal health ,Nutrition. Foods and food supply ,business.industry ,Chemical technology ,sub-inhibitory concentration ,food-producing animals ,Biol5012 ,food‐producing animals ,sub‐inhibitory concentration ,Contamination ,Feed Antimicrobial Resistance Selection Concentration (FARSC) ,Antimicrobial ,food-producing animal ,Biotechnology ,Scientific Opinion ,Animal Science and Zoology ,Parasitology ,business ,Food Science ,medicine.drug - Abstract
The specific concentrations of trimethoprim in non-target feed for food-producing animals below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. The FARSC for trimethoprim was estimated. Uncertainties and data gaps associated to the levels reported were addressed. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. No suitable data for the assessment were available. It was recommended to perform further studies to supply more diverse and complete data related to the requirements for calculation of the FARSC for trimethoprim. info:eu-repo/semantics/publishedVersion
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- 2021
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43. Maximum levels of cross‐contamination for 24 antimicrobial active substances in non‐target feed. Part 12: Tetracyclines: tetracycline, chlortetracycline, oxytetracycline, and doxycycline
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I, Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutsoumanis K., Allende A., Alvarez-Ordonez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., and Peixe L.
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Chlortetracycline ,663/664 ,Tetracycline ,Veterinary (miscellaneous) ,Growth promotion ,TP1-1185 ,Plant Science ,Oxytetracycline ,Biology ,Microbiology ,Antibiotic resistance ,growth promotion ,medicine ,TX341-641 ,antimicrobial resistance ,Food science ,chlortetracycline ,tetracycline ,Doxycycline ,doxycycline ,Nutrition. Foods and food supply ,Chemical technology ,food-producing animals ,Contamination ,Antimicrobial ,food-producing animal ,Animal Science and Zoology ,Parasitology ,oxytetracycline ,Food Science ,medicine.drug - Abstract
The specific concentrations of tetracycline, chlortetracycline, oxytetracycline and doxycycline in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. The FARSC for these four tetracyclines was estimated. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. Levels in feed that showed to have an effect on growth promotion/increased yield were reported for tetracycline, chlortetracycline, oxytetracycline, whilst for doxycycline no suitable data for the assessment were available. Uncertainties and data gaps associated with the levels reported were addressed. It was recommended to perform further studies to supply more diverse and complete data related to the requirements for calculation of the FARSC for these antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
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44. Maximum levels of cross‐contamination for 24 antimicrobial active substances in non‐target feed. Part 10: Quinolones: flumequine and oxolinic acid
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I, Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Koutsoumanis K., Allende A., Alvarez-Ordoñez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., Peixe L., Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
- Subjects
663/664 ,Veterinary (miscellaneous) ,Growth promotion ,flumequine ,TP1-1185 ,Plant Science ,Microbiology ,Non target ,Antibiotic resistance ,growth promotion ,oxolinic acid ,Oxolinic acid ,medicine ,TX341-641 ,Food science ,antimicrobial resistance ,Food8822 ,yield increase ,Animal health ,Nutrition. Foods and food supply ,Chemical technology ,sub-inhibitory concentration ,food-producing animals ,food‐producing animals ,Contamination ,sub‐inhibitory concentration ,Antimicrobial ,food-producing animal ,Scientific Opinion ,Flumequine ,Environmental science ,Animal Science and Zoology ,Parasitology ,Food Science ,medicine.drug - Abstract
The specific concentrations of flumequine and oxolinic acid in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. However, due to the lack of data on the parameters required to calculate the FARSC, it was not possible to conclude the assessment until further experimental data are available. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. No suitable data for the assessment were available. It was recommended to carry out studies to generate the data that are required to fill the gaps which prevented the calculation of the FARSC for these antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
- Full Text
- View/download PDF
45. Maximum levels of cross‐contamination for 24 antimicrobial active substances in non‐target feed. Part 4: β‐Lactams: amoxicillin and penicillin V
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I, Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Indústries Alimentàries, Funcionalitat i Seguretat Alimentària, Koutso111umanis K., Allende A., Alvarez-Ordonez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., and Peixe L.
- Subjects
663/664 ,Veterinary (miscellaneous) ,Growth promotion ,TP1-1185 ,Plant Science ,Biology ,Microbiology ,Antibiotic resistance ,Non target ,growth promotion ,β lactams ,medicine ,TX341-641 ,antimicrobial resistance ,Food science ,yield increase ,amoxicillin ,Nutrition. Foods and food supply ,sub-inhibitory concentration ,Chemical technology ,food-producing animals ,Biol5012 ,food‐producing animals ,sub‐inhibitory concentration ,Contamination ,Amoxicillin ,penicillin V ,Antimicrobial ,food-producing animal ,Penicillin ,Scientific Opinion ,Animal Science and Zoology ,Parasitology ,Food Science ,medicine.drug - Abstract
The specific concentrations of amoxicillin and penicillin V in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. However, due to the lack of data on the parameters required to calculate the FARSC, it was not possible to conclude the assessment until further experimental data become available. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. Levels in feed that showed to have an effect on growth promotion/increased yield were reported for amoxicillin, whilst for penicillin V no suitable data for the assessment were available. It was recommended to carry out studies to generate the data that are required to fill the gaps which prevented the calculation of the FARSC for these two antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
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46. Maximum levels of cross‐contamination for 24 antimicrobial active substances in non‐target feed. Part 6: Macrolides: tilmicosin, tylosin and tylvalosin
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I, Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Koutsoumanis K., Allende A., Alvarez-Ordoñez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., Peixe L., Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
- Subjects
663/664 ,Veterinary (miscellaneous) ,Growth promotion ,TP1-1185 ,Plant Science ,Tylosin ,Biology ,tilmicosin ,Microbiology ,chemistry.chemical_compound ,Antibiotic resistance ,Non target ,growth promotion ,TX341-641 ,antimicrobial resistance ,Food science ,Tilmicosin ,yield increase ,tylosin ,Nutrition. Foods and food supply ,Chemical technology ,food-producing animals ,tylvalosin ,Contamination ,Antimicrobial ,food-producing animal ,chemistry ,Animal Science and Zoology ,Parasitology ,Tylvalosin ,Food Science - Abstract
The specific concentrations of tilmicosin, tylosin and tylvalosin in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield, were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. However, due to the lack of data on the parameters required to calculate the FARSC, it was not possible to conclude the assessment until further experimental data become available. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. Levels in feed that showed to have an effect on growth promotion/increased yield were reported for tilmicosin and tylosin, whilst for tylvalosin no suitable data for the assessment were available. It was recommended to carry out studies to generate the data that are required to fill the gaps which prevented the calculation of the FARSC for these three antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
- Full Text
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47. Maximum levels of cross‐contamination for 24 antimicrobial active substances in non‐target feed. Part 11: Sulfonamides
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EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis, Konstantinos, Allende, Ana, Alvarez-Ordóñez, Avelino, Bolton, Declan, Bover-Cid, Sara, Chemaly, Marianne, Davies, Robert, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Andersson, Dan I., Bampidis, Vasileios, Bengtsson-Palme, Johan, Bouchard, Damien, Ferran, Aude, Kouba, Maryline, López Puente, Secundino, López-Alonso, Marta, Nielsen, Søren Saxmose, Pechová, Alena, Petkova, Mariana, Girault, Sebastien, Broglia, Alessandro, Guerra, Beatriz, Innocenti, Matteo Lorenzo, Liébana, Ernesto, López-Gálvez, Gloria, Manini, Paola, Stella, Pietro, Peixe, Luisa, Koutsoumanis K., Allende A., Alvarez-Ordoñez A., Bolton D., Bover-Cid S., Chemaly M., Davies R., De Cesare A., Herman L., Hilbert F., Lindqvist R., Nauta M., Ru G., Simmons M., Skandamis P., Suffredini E., Andersson D.I., Bampidis V., Bengtsson-Palme J., Bouchard D., Ferran A., Kouba M., Lopez Puente S., Lopez-Alonso M., Nielsen S.S., Pechova A., Petkova M., Girault S., Broglia A., Guerra B., Innocenti M.L., Liebana E., Lopez-Galvez G., Manini P., Stella P., Peixe L., Indústries Alimentàries, and Funcionalitat i Seguretat Alimentària
- Subjects
Sulfamerazine ,663/664 ,Veterinary (miscellaneous) ,Growth promotion ,TP1-1185 ,Plant Science ,Sulfonamide ,Microbiology ,Antibiotic resistance ,Non target ,growth promotion ,medicine ,TX341-641 ,antimicrobial resistance ,Food science ,yield increase ,Sulfonamides ,Animal health ,Nutrition. Foods and food supply ,Chemical technology ,sub-inhibitory concentration ,food‐producing animals ,food-producing animals ,sub‐inhibitory concentration ,Contamination ,Antimicrobial ,food-producing animal ,Sulfathiazole ,Environmental science ,Animal Science and Zoology ,Parasitology ,Food Science ,medicine.drug - Abstract
The specific concentrations of sulfonamides in non-target feed for food-producing animals, below which there would not be an effect on the emergence of, and/or selection for, resistance in bacteria relevant for human and animal health, as well as the specific antimicrobial concentrations in feed which have an effect in terms of growth promotion/increased yield were assessed by EFSA in collaboration with EMA. Details of the methodology used for this assessment, associated data gaps and uncertainties, are presented in a separate document. To address antimicrobial resistance, the Feed Antimicrobial Resistance Selection Concentration (FARSC) model developed specifically for the assessment was applied. However, due to the lack of data on the parameters required to calculate the FARSC, it was not possible to conclude the assessment until further experimental data are available. To address growth promotion, data from scientific publications obtained from an extensive literature review were used. Levels in feed that showed to have an effect on growth promotion/increased yield were identified for three sulfonamides: sulfamethazine, sulfathiazole and sulfamerazine. It was recommended to carry out studies to generate the data that are required to fill the gaps which prevented the calculation of the FARSC for these antimicrobials. info:eu-repo/semantics/publishedVersion
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- 2021
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48. Low-Level Tetracycline Resistance Gene tet(O) _3 in Campylobacter jejuni.
- Author
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Pacífico, Cátia, Wösten, Marc M. S. M., and Hilbert, Friederike
- Subjects
CAMPYLOBACTER jejuni ,EFFLUX (Microbiology) ,REVERSE transcriptase polymerase chain reaction ,TETRACYCLINE ,TETRACYCLINES ,WHOLE genome sequencing - Abstract
Campylobacter (C.) spp. are the most important foodborne, bacterial, and zoonotic pathogens worldwide. Resistance monitoring of foodborne bacterial pathogens is an important tool to control antimicrobial resistance as a part of the "One Health" approach. The detection and functionality of new resistance genes are of paramount importance in applying more effective screening methods based on whole genome sequencing (WGS). Most tetracycline-resistant C. spp. isolates harbor tet(O), a gene that encodes a ribosomal protection protein. Here we describe tet(O)_3, which has been identified in two food isolates of C. jejuni and is very similar to the tet(O) gene in Streptococcus pneumoniae, having a truncated promoter sequence. This gene confers resistance to tetracycline below 1 mg/L, which is the epidemiological cut-off value. We have analyzed the entire genome of these two isolates, together with a C. jejuni isolate found to have high-level resistance to tetracycline. In contrast to the highly resistant isolate, the promoter of tet(O)_3 is highly responsive to tetracycline, as observed by reverse transcription polymerase chain reaction (RT-PCR). In addition, the two isolates possess a CRISPR repeat, fluoroquinolone resistance due to the gyrA point mutation C257T, a β-lactamase resistance gene bla
OXA-184 , a multidrug efflux pump CmeABC and its repressor CmeR, but no plasmid. Low-level antibiotic resistant C. jejuni might therefore have an advantage for surviving in non-host environments. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
49. Update of the list of qualified presumption of safety (QPS) recommended microorganisms intentionally added to food or feed as notified to EFSA.
- Author
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Koutsoumanis, Konstantinos, Allende, Ana, Álvarez‐Ordóñez, Avelino, Bolton, Declan, Bover‐Cid, Sara, Chemaly, Marianne, de Cesare, Alessandra, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luísa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Cocconcelli, Pier Sandro, Fernández Escámez, Pablo Salvador, Maradona, Miguel Prieto, Querol, Amparo, and Sijtsma, Lolke
- Subjects
ENTEROCOCCUS faecium ,CLOSTRIDIUM butyricum ,MICROORGANISMS ,BACILLUS (Bacteria) ,FILAMENTOUS fungi - Abstract
The qualified presumption of safety (QPS) provides a generic pre‐assessment of the safety of microorganisms intended for use in the food or feed chains, to support the work of EFSA's Scientific Panels. QPS assessment allows a fast track evaluation of strains belonging to QPS taxonomic units (TUs): species for bacteria, yeast, fungi, protists/microalgae and families for viruses. QPS TUs are assessed for their body of knowledge and safety. Safety concerns related to a QPS TU are reflected, when possible, as 'qualifications', which should be tested at strain and/or product level. Based on the possession of potentially harmful traits by some strains, filamentous fungi, bacteriophages, oomycetes, streptomycetes, Enterococcus faecium, Escherichia coli and Clostridium butyricum are excluded from the QPS assessment. Between October 2019 and September 2022, 323 notifications of TUs were received, 217 related to feed additives, 54 to food enzymes, food additives and flavourings, 14 to plant protection products and 38 to novel foods. The list of QPS‐recommended TUs is reviewed every 6 months following an extensive literature search strategy. Only sporadic infections with a few QPS status TUs in immunosuppressed individuals were identified and the assessment did not change the QPS status of these TUs. The QPS list has been updated in relation to the most recent taxonomic insights and the qualifications were revised and streamlined. The qualification 'absence of aminoglycoside production ability' was withdrawn for Bacillus velezensis. Six new TUs received the QPS status: Bacillus paralicheniformis with the qualification 'absence of toxigenic activity' and 'absence of bacitracin production ability'; Bacillus circulans with the qualifications for 'production purposes only' and 'absence of cytotoxic activity'; Haematococcus lacustris (synonym Haematococcus pluvialis) and Ogataea polymorpha, both with the qualification 'for production purposes only'; Lactiplantibacillus argentoratensis; Geobacillus thermodenitrificans with the qualification 'absence of toxigenic activity'. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
50. Microbiological safety of aged meat.
- Author
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Koutsoumanis, Konstantinos, Allende, Ana, Alvarez‐Ordóñez, Avelino, Bover‐Cid, Sara, Chemaly, Marianne, De Cesare, Alessandra, Herman, Lieve, Hilbert, Friederike, Lindqvist, Roland, Nauta, Maarten, Peixe, Luisa, Ru, Giuseppe, Simmons, Marion, Skandamis, Panagiotis, Suffredini, Elisabetta, Blagojevic, Bojan, Van Damme, Inge, Hempen, Michaela, Messens, Winy, and Bolton, Declan
- Subjects
LACTIC acid bacteria ,PORK industry ,YERSINIA enterocolitica ,MEAT spoilage ,MEAT ,IMPACT loads - Abstract
The impact of dry‐ageing of beef and wet‐ageing of beef, pork and lamb on microbiological hazards and spoilage bacteria was examined and current practices are described. As 'standard fresh' and wet‐aged meat use similar processes these were differentiated based on duration. In addition to a description of the different stages, data were collated on key parameters (time, temperature, pH and aw) using a literature survey and questionnaires. The microbiological hazards that may be present in all aged meats included Shiga toxin‐producing Escherichia coli (STEC), Salmonella spp., Staphylococcus aureus, Listeria monocytogenes, enterotoxigenic Yersinia spp., Campylobacter spp. and Clostridium spp. Moulds, such as Aspergillus spp. and Penicillium spp., may produce mycotoxins when conditions are favourable but may be prevented by ensuring a meat surface temperature of −0.5 to 3.0°C, with a relative humidity (RH) of 75–85% and an airflow of 0.2–0.5 m/s for up to 35 days. The main meat spoilage bacteria include Pseudomonas spp., Lactobacillus spp. Enterococcus spp., Weissella spp., Brochothrix spp., Leuconostoc spp., Lactobacillus spp., Shewanella spp. and Clostridium spp. Under current practices, the ageing of meat may have an impact on the load of microbiological hazards and spoilage bacteria as compared to standard fresh meat preparation. Ageing under defined and controlled conditions can achieve the same or lower loads of microbiological hazards and spoilage bacteria than the variable log10 increases predicted during standard fresh meat preparation. An approach was used to establish the conditions of time and temperature that would achieve similar or lower levels of L. monocytogenes and Yersinia enterocolitica (pork only) and lactic acid bacteria (representing spoilage bacteria) as compared to standard fresh meat. Finally, additional control activities were identified that would further assure the microbial safety of dry‐aged beef, based on recommended best practice and the outputs of the equivalence assessment. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
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