220 results on '"Hongmei SU"'
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2. Conception of coordinated development technology system for coalbed methane and underground coal gasification in inclined coal seams
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Bo WEI, Shuguang YANG, Xin LI, Shuangming WANG, Qingmin SHI, Lanhe YANG, Gang WANG, Xuehai FU, Hongmei SU, Chao JIA, Zhenpeng HU, and Chen ZHAO
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coalbed methane ,underground coal gasification ,inclined coal seam ,coordinated development ,technical routes ,Mining engineering. Metallurgy ,TN1-997 - Abstract
Coalbed methane (CBM) development and underground coal gasification (UCG) are important sources for coal-based natural gas production in China, and coal and CBM resources are abundant in the inclined coalbed development area of the Xinjiang foreland thrust belt. To deeply analyze the feasibility of coordinated development of CBM and UCG in inclined coal seams, the existing key technologies of CBM and UCG and their significances for coordinated development of CBM- UCG was systematically analyzed, the advantages, the technical routes, major problems and future research directions of coordinated development of CBM and UCG in inclined coal seams were also elaborated, the major problems faced and the direction of future research were proposed, and the following understanding was obtained. ① The coordinated development of CBM-UCG under the “CBM development dredging effect”, “UCG thermal desorption effect”, and “UCG mining pressure releasing effect” can form a virtuous cycle of mutual promotion. ② The coordinated development technology routes was proposed, such as vertical wells + inclined well along coal seam with “first drainage and then gasification”, multiple inclined wells along the coal seam with “simultaneous drainage and gasification”, directional L-typed CBM wells + UCG wells along the coal seam direction with “simultaneous gasification and drainage”, UCG wells along inclined wells in the lower coal + directional L-typed CBM wells in the upper coal seam with “first drainage, then gasification, and then drainage again”, and the “well factory” arrangement of complex well type. ③ The coordinated development of CBM and UCG faces theoretical issues such as weak theoretical foundation research on geological constituency evaluation, unclear expansion range of UCG thermal action under the condition of fracture network, and the undetermined range of rock movement and pressure relief in the UCG process of inclined coal seams. It also faces the engineering issues such as coordinated development of CBM-UCG “well factory” drilling technology, coordinated development of CBM wells and UCG wells production system, coordinated development of CBM and UCG wells geodynamic measurement and control, and the sealing and high-temperature-resistant protection of CBM wells. ④ It is necessary to strengthen the study on the evaluation of geological site selection for the coordinated development of CBM and UCG in inclined coal seams, the theoretical research on the development dynamics, and the pioneering experimental study on engineering coordination technology, so as to ensure that the coordinated development is safe, orderly, controllable and efficient.
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- 2024
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3. Gas content prediction simulation of unsaturated low coalification coal cores
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Bo WEI, Ji ZHANG, Xin LI, Yong HU, and Hongmei SU
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coalbed methane ,gas content ,low coalification coal ,loss gas content ,coal core ,Mining engineering. Metallurgy ,TN1-997 - Abstract
In order to compare and analyze the on-site desorption performance and numerical simulation desorption performance of low coalification reservoir coal core, the on-site gas content of coal core of a coalbed methane (CBM) well in Xinjiang was measured, and a numerical model of coal core in undersaturated reservoir with adsorbed gas is established, and based on this, the loss gas content calculation method was analyzed. The results show that the loss gas, desorption gas and residual gas contents calculated by the desorption numerical model of the unsaturated coal core (adsorbed gas saturation 54.77%, 77.51%, and 99.79%, respectively) were close to the corresponding results measured in the field (error
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- 2024
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4. Dual Functionality of 6‑Methylthioguanine: Synergistic Effects Enhancing the Photolability of DNA Nucleobases
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Qian Zhou, Yuxia Hao, Jialong Jie, Shuo Wang, Ye Xia, Chunfan Yang, Lihong Liu, Wei-Hai Fang, and Hongmei Su
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Chemistry ,QD1-999 - Published
- 2024
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5. A nano-preparation approach to enable the delivery of daphnoretin to potentiate the therapeutical efficacy in hepatocellular cancer
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Guanglin Zhu, Bing Wang, Guo Feng, Zhirong Zhou, Wei Li, Wen Liu, Hongmei Su, Wenjing Wang, Tiejie Wang, and Xie-an Yu
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daphnoretin ,natural product ,targeting delivery system for the liver ,therapeutical efficacy in HCC ,nano-preparation ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Daphnoretin (DAP), isolated from a traditional Chinese medicine Wikstroemia indica (Linn. C. A. Meyer), could induce apoptosis of hepatocellular cancer (HCC) and inhibit tumor growth. However, the application of DAP in cancer therapies was hampered because to its poor solubility. Herein, this study aimed to design an approach of double-targeted nano-preparation to enable the delivery of DAP to potentiate the therapeutical efficacy in liver cancer via glycyrrhetinic acid-polyethylene glycol-block-poly (D,L-lactic acid)/polyethylene glycol-block-poly (D,L-lactic acid)-DAP (GPP/PP-DAP). In particular, the purity of separated DAP was up to 98.12% for preparation research. GPP/PP-DAP was successfully prepared by the thin-film hydration method. Subsequently, the GPP/PP-DAP was optimized by univariate analysis and the response surface methodology, producing a stable and systemically injectable nano-preparation. Impressively, on the one hand, cytotoxicity studies showed that the IC50 of the GPP/PP-DAP was lower than that of free DAP. On the other hand, the GPP/PP-DAP was more likely to be endocytosed by HepG2 cells and targeted to the liver with orthotopic tumors, potentiating the therapeutical efficacy in HCC. Collectively, both in vitro and in vivo results indicated the excellent tumor inhibition and liver targeting of GPP/PP-DAP, suggesting the nano-preparation could serve as a potential drug delivery system for natural ingredients with anti-hepatoma activity to lay the theoretical foundation for clinical application.
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- 2022
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6. Ultrafast excited state dynamics and light-switching of [Ru(phen)2(dppz)]2+ in G-quadruplex DNA
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Chunfan Yang, Qian Zhou, Zeqing Jiao, Hongmei Zhao, Chun-Hua Huang, Ben-Zhan Zhu, and Hongmei Su
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Chemistry ,QD1-999 - Abstract
Photoactive ruthenium metal complexes are relevant luminescent DNA markers, but deciphering their local excited state dynamics in complex biochemical environments is challenging. Here the authors combine femtosecond and nanosecond pump-probe spectroscopy to elucidate the local hydration effects and 3MLCT relaxation dynamics of [Ru(phen)2(dppz)]2+ in two G-quadruplexes.
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- 2021
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7. Association of a Novel DOCK2 Mutation-Related Gene Signature With Immune in Hepatocellular Carcinoma
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Yushen Huang, Wen Luo, Siyun Chen, Hongmei Su, Wuchang Zhu, Yuanyuan Wei, Yue Qiu, Yan Long, Yanxia Shi, and Jinbin Wei
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hepatocellular carcinoma ,DOCK2 ,prognosis ,biomarker ,immune ,Genetics ,QH426-470 - Abstract
Hepatocellular carcinoma (HCC) is a malignant tumor with high morbidity and mortality worldwide. Many studies have shown that dedicator of cytokinesis 2 (DOCK2) has a crucial role as a prognostic factor in various cancers. However, the potentiality of DOCK2 in the diagnosis of HCC has not been fully elucidated. In this work, we aimed to investigate the prognostic role of DOCK2 mutation in HCC. The Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC) cohorts were utilized to identify the mutation frequency of DOCK2. Then, univariate Cox proportional hazard regression analysis, random forest (RF), and multivariate Cox regression analysis were performed to develop the risk score that was significantly related to DOCK2 mutation. Moreover, Gene Set Enrichment Analysis (GSEA), Gene Set Variation Analysis (GSVA), and immune correlation analysis were conducted for an in-depth study of the biological process of DOCK2 mutation involved in HCC. The results revealed that the mutation frequency of DOCK2 was relatively higher than that in non-cancer control subjects, and patients with DOCK2 mutations had a low survival rate and a poor prognosis compared with the DOCK2-wild group. In addition, the secretin receptor (SCTR), tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing 1 (TANC1), Alkb homolog 7 (ALKBH7), FRAS1-related extracellular matrix 2 (FREM2), and G protein subunit gamma 4 (GNG4) were found to be the most relevant prognostic genes of DOCK2 mutation, and the risk score based on the five genes played an excellent role in predicting the status of survival, tumor mutation burden (TMB), and microsatellite instability (MSI) in DOCK2 mutant patients. In addition, DOCK2 mutation and the risk score were closely related to immune responses. In conclusion, the present study identifies a novel prognostic signature in light of DOCK2 mutation-related genes that shows great prognostic value in HCC patients; and this gene mutation might promote tumor progression by influencing immune responses. These data may provide valuable insights for future investigations into personalized forecasting methods and also shed light on stratified precision oncology treatment.
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- 2022
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8. Elucidating heterogeneous photocatalytic superiority of microporous porphyrin organic cage
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Chao Liu, Kunhui Liu, Chiming Wang, Heyuan Liu, Hailong Wang, Hongmei Su, Xiyou Li, Banglin Chen, and Jianzhuang Jiang
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Science - Abstract
The investigation on the catalytic properties of porous organic cages is still in an initial stage. Herein, the heterogeneous photocatalytic superiority of microporous porphyrin organic cage has been clearly elucidated due to unique cage-induced long triplet lifetime and porous structure.
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- 2020
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9. Morphological, cytological and molecular analyses of a synthetic hexaploid derived from an interspecific hybrid between Gossypium hirsutum and Gossypium anomalum
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Xia Zhang, Caijiao Zhai, Linchi He, Qi Guo, Xianggui Zhang, Peng Xu, Hongmei Su, Yuanyong Gong, Wanchao Ni, and Xinlian Shen
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Cotton cytogenetics ,Polyploidy ,SSR marker ,G. anomalum ,Agriculture ,Agriculture (General) ,S1-972 - Abstract
Gossypium anomalum represents an inestimable source of genes that could potentially be transferred into the gene pool of cultivated cotton. To resolve interspecific hybrid sterility problems, we previously treated triploid hybrids derived from a cross between Gossypium hirsutum and G. anomalum with 0.15% colchicine and obtained a putative fertile hexaploid. In this study, we performed morphological, molecular and cytological analyses to assess the hybridity and doubled status of putative interspecific hybrid plants. Most of the morphological characteristics of the putative hexaploid plants were intermediate between G. hirsutum and G. anomalum. Analysis of mitotic metaphase plates revealed 78 chromosomes, confirming the doubled hybrid status of the hexaploid. Genome-wide molecular analysis with different genome-derived SSR markers revealed a high level of polymorphism (96.6%) between G. hirsutum and G. anomalum. The marker transferability rate from other species to G. anomalum was as high as 98.0%. The high percentage of polymorphic markers with additive banding profiles in the hexaploid indicates the hybridity of the hexaploid on a genome-wide level. A-genome-derived markers were more powerful for distinguishing the genomic differences between G. hirsutum and G. anomalum than D-genome-derived markers. This study demonstrates the hybridity and chromosomally doubled status of the (G. anomalum × G. hirsutum)2 hexaploid using morphological, cytological and molecular marker methods. The informative SSR markers screened in the study will be useful marker resources for tracking the flow of G. anomalum genetic material among progenies that may be produced by future backcrosses to G. hirsutum.
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- 2014
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10. Binding Interactions of Zinc Cationic Porphyrin with Duplex DNA: From B-DNA to Z-DNA
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Tingxiao Qin, Kunhui Liu, Di Song, Chunfan Yang, Hongmei Zhao, and Hongmei Su
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Z-DNA ,ZnTMPyP4 ,transient absorption spectroscopy ,binding mode ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Recognition of unusual left-handed Z-DNA by specific binding of small molecules is crucial for understanding biological functions in which this particular structure participates. Recent investigations indicate that zinc cationic porphyrin (ZnTMPyP4) is promising as a probe for recognizing Z-DNA due to its characteristic chiroptical properties upon binding with Z-DNA. However, binding mechanisms of the ZnTMPyP4/Z-DNA complex remain unclear. By employing time-resolved UV-visible absorption spectroscopy in conjunction with induced circular dichroism (ICD), UV-vis, and fluorescence measurements, we examined the binding interactions of ZnTMPyP4 towards B-DNA and Z-DNA. For the ZnTMPyP4/Z-DNA complex, two coexisting binding modes were identified as the electrostatic interaction between pyridyl groups and phosphate backbones, and the major groove binding by zinc(II) coordinating with the exposed guanine N7. The respective contribution of each mode is assessed, allowing a complete scenario of binding modes revealed for the ZnTMPyP4/Z-DNA. These interaction modes are quite different from those (intercalation and partial intercalation modes) for the ZnTMPyP4/B-DNA complex, thereby resulting in explicit differentiation between B-DNA and Z-DNA. Additionally, the binding interactions of planar TMPyP4 to DNA were also investigated as a comparison. It is shown that without available virtual orbitals to coordinate, TMPyP4 binds with Z-DNA solely in the intercalation mode, as with B-DNA, and the intercalation results in a structural transition from Z-DNA to B-ZNA. These results provide mechanistic insights for understanding ZnTMPyP4 as a probe of recognizing Z-DNA and afford a possible strategy for designing new porphyrin derivatives with available virtual orbitals for the discrimination of B-DNA and Z-DNA.
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- 2018
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11. Multiphoton tandem photoredox catalysis of [Ir(dFCF3ppy)2(dtbbpy)]+ facilitating radical acylation reactions.
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Zhicong Lin, Qian Zhou, Yan Liu, Chenli Chen, Jialong Jie, and Hongmei Su
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- 2024
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12. Reducing Hepatotoxicity Mechanism of Radix Wikstroemia Indica by Processing with 'Sweat Soaking Method' Using UPLC-MS/MS and a Cocktail Probe Substrate
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Guo Feng, Hongmei Su, Qin Xu, Wei Li, Wen Liu, Zengguang Wu, Lailai Li, Wenjing Wang, Guanglin Zhu, Chenchen Ren, Xueli Song, Ju Zhang, and Zhengyan He
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Drug Discovery ,Pharmaceutical Science ,Molecular Medicine - Abstract
Background: Radix Wikstroemia indica is a traditional Chinese medicine (TCM) used as anti-inflammatory and anti-tumor drug. However, it has serious hepatotoxicity, "Sweat soaking method" processed could effectively decrease its hepatotoxicity. Objective: The objective of this study is to study the effects of Radix Wikstroemia indica on six kinds of cytochrome P450(CYP450) isozymes of rat liver microsomes before and after processing, and to study the mechanism of Radix Wikstroemia indica processed by the "Sweat soaking method" to reduce liver toxicity in rats. Methods: In this study, the effects of Radix Wikstroemia indica and processed Radix Wikstroemia indica on the six main CYP450 isoforms (2E1, 1A2, 2C6, 2D1, 2C11, and 3A1) were investigated in vitro. Using a cocktail probe of CYP450 isoform-specific substrates and their metabolites, we carried out in vitro enzymatic studies in liver microsomal incubation systems via UPLC-MS/MS. Results: The results showed that the established UPLC-MS/MS method was precise and reliable. Compared with the blank group, the activities of six enzymes in the RWI and PRWI groups were higher than those in the blank group. At the same dose, the enzyme activities of CYP2E1, CYP1A2, CYP2C6, CYP2C11, and CYP3A1 increased with the increase in dose, and the enzyme activities of the RWI group were higher than those of the PRWI group. The enzyme activities of CYP2E1 and CYP1A2 in the Radix Wikstroemia indica group were significantly increased compared with the blank group, CYP3A1 in the RWI high-dose group was higher than that in the blank group and PRWI group with statistical differences (p Conclusion: The processed Radix Wikstroemia indica could reduce liver injury, and its detoxication mechanism might be related to the decrease in enzyme activity of CYP1A2, CYP2E1 and CYP3A1.
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- 2023
13. Pharmacokinetics and Tissue Distribution Study of Daphnoretin in Ethanol Extract from the Roots of Wikstroemia Indica in Rats by a Validated UPLC-MS/MS Method
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Guo Feng, Wenjing Wang, Lailai Li, Wei Li, Wen Liu, Zengguang Wu, Hongmei Su, Guanglin Zhu, Chenchen Ren, Xueli Song, Ju Zhang, and Zhengyan He
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Biophysics ,Pharmaceutical Science ,Molecular Medicine ,Biochemistry - Abstract
Background: Daphnoretin, as a known bicoumarin compound that contained various pharmacological activities, was isolated from Wikstroemia indica C.A. Mey (RWI). Objective: The study aims to investigate the pharmacokinetic characteristics of daphnoretin from RWI ethanol extracts in rat plasma and to determine daphnetin in rat plasma and various tissues by a rapid, reliable and sensitive ultra high performance liquid chromatography with tandem mass spectrometry method. Methods: The UPLC-MS/MS method was established. Daphnoretin and IS (buspirone) were chromatographed on an agilent Zorbax XDB-C18 column (2.1 mm × 50 mm, 3.5 μm), and Gradient elution of acetonitrile-0.15% formic acid in aqueous solution. Quantification was performed using electrospray ionization in positive ion multiple reaction monitoring mode of the transitions m/z 353.1→179.1 for daphnoretin and m/z 386.3→122.3 for IS. Results: Good linearity between 5-10000 ng/mL for cyperidin in plasma and tissue samples (r ≥ 0.99) was resulted. The accuracies of plasma and tissue homogenates ranged from-3.31% to 9.00%, and the precision was less than 5.78%. After that, the validated method was successfully applied to the pharmacokinetics and tissue distribution study of daphnoretin after oral administration of ethanol extract from the roots of RWI to rats. Conclusion: Daphnoretin was well absorbed in the systemic circulation after oral administration and was widely distributed in tissues, with the highest concentration in lung tissue. This study is beneficial to the development and utilization of RWI and provides a reasonable reference for its clinical administration.
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- 2023
14. TiO2 as a Nanozyme Mimicking Photolyase to Repair DNA Damage
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Qian Zhou, Tianfeng Zhang, Jialong Jie, Yue Hou, Zheng Hu, Zeqing Jiao, and Hongmei Su
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General Materials Science ,Physical and Theoretical Chemistry - Published
- 2022
15. Isolation and Identification of Anti-Inflammatory Active Components from Asparagi Radix cochinchinensis Based on HPLC-CAD and UPLC-Q/TOF-MS Techniques.
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Yan Lei, Bing Wang, Guanglin Zhu, Guo Feng, Wei Li, Caiyao Han, Qian Qin, Xie-an Yu, Xueli Song, Zhengyan He, Ju Zhang, Hongmei Su, and Wenjing Wang
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SAPONINS ,CHINESE medicine ,ANTI-inflammatory agents ,CYCLOOXYGENASE 2 inhibitors - Abstract
Background: In the research of the pharmacological activity of modern Chinese medicine, a large number of traditional Chinese medicines show anti-inflammatory activity. Asparagi radix is one of the anti-inflammatory drugs. With the deepening of people's research on Asparagi radix, its anti-inflammatory pharmacological effects have been gradually explored, but its specific anti-inflammatory active ingredients are still unclear. Therefore, it is necessary to screen and identify its specific anti-inflammatory active ingredients from Asparagi radix. At present, COX-2 is an important target for the treatment of chronic inflammation, and many drugs targeting this target have been marketed. However, some drugs have serious side effects, so it is very meaningful to study new COX-2 inhibitors. Methods: In this experiment, the fractions of different time periods are separated by high performance liquid chromatography-separation-trapping system (HPLC-CAD-FC). Then, ultra-high performance liquid chromatography-quadrupole time-offlight/mass spectrometry (UPLC-Q-TOF/MS) and biological activity analysis techniques are used to identify the chemical composition and in vitro anti-inflammatory activity of each fraction. Finally, the data is integrated to screen out the substances with potential anti-inflammatory activity in Asparagi radix. Results: The results showed that the method established in this experiment can successfully isolate the active components of Asparagi radix, and four saponins with potential anti-inflammatory activity are identified. Conclusion: In summary, the analysis method established in this study can quickly and effectively screen out its anti-inflammatory active substances, and its potential anti-inflammatory active ingredients are mainly steroidal saponins. [ABSTRACT FROM AUTHOR]
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- 2024
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16. The Integrated Analysis of Transcriptomics and Metabolomics Unveils the Therapeutical Effect of Asiatic Acid on Alcoholic Hepatitis in Rats
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Siyun Chen, Yushen Huang, Hongmei Su, Wuchang Zhu, Yuanyuan Wei, Yan Long, Yanxia Shi, and Jinbin Wei
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Ethanol ,Hepatitis, Alcoholic ,NF-E2-Related Factor 2 ,Immunology ,NF-kappa B ,Glycerophospholipids ,Rats ,Oxidative Stress ,Liver ,Animals ,Metabolomics ,Immunology and Allergy ,Pentacyclic Triterpenes ,Transcriptome - Abstract
The present study was to investigate the therapeutical effects and mechanisms of Asiatic acid from Potentilla Chinensis against alcoholic hepatitis. Rats were intragastrically fed with alcohol for 12 weeks to induce alcoholic hepatitis and then treated with various drugs for further 12 weeks. The results showed that Asiatic acid significantly alleviated liver injury caused by alcohol in rats, as evidenced by the improved histological changes and the lower levels of AST, ALT, and TBIL. Besides, Asiatic acid significantly enhanced the activity of ADH and ALDH, promoting alcohol metabolism. Asiatic acid suppressed CYP2E1 activity and NADP+/NADPH ratio, resulting in low ROS production. Further study revealed that Asiatic acid markedly reduced hepatocyte apoptosis by regulating the expression levels of the caspase and Bcl-2 families. Moreover, Asiatic acid could regulate the Keap1/Nrf2 and NF-κB signaling pathway, attenuating oxidative stress and inflammation as a result. Interestingly, the comprehensive analysis of transcriptomics and metabolomics indicated that Asiatic acid regulated the gene expression of Gpat4 and thereby affected the biosynthesis of the metabolites (1-acyl-Sn-glycerol-3-phosphocholine, phosphatidylcholine, phosphatidylethanolamine, and phosphatidylserine), regulating the glycerophospholipid metabolism pathway and ultimately ameliorating hepatocyte damage. In conclusion, this study demonstrates that Asiatic acid can ameliorate alcoholic hepatitis by modulating the NF-κB and Keap1/Nrf2 signaling pathways and the glycerophospholipid metabolism pathway, which may be developed as a potential medicine for the treatment of alcoholic hepatitis.
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- 2022
17. The role of brevican regulation in the antidepressant effects of electroacupuncture in a chronic stress rat model
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Cong Gai, Zhenyu Guo, Kai Guo, Shixin Yang, Yi Zhang, Huimin Zhu, Feifei Kan, Hongmei Sun, and Die Hu
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Depression ,Electroacupuncture ,Brevican ,Perineuronal nets ,Plasticity ,Miscellaneous systems and treatments ,RZ409.7-999 - Abstract
Objective: To investigate the mechanism of electroacupuncture (EA) for treating depression and to explore the role of brevican in the medial prefrontal cortex (mPFC) in modulating stress susceptibility and the antidepressant effects of EA in rats. Methods: Twenty-four Sprague–Dawley (SD) rats were equally divided into three groups: green fluorescent protein (GFP) + control, GFP + chronic unpredicted mild stress (CUMS), and short-hairpin RNA targeting on brevican (shBcan) + CUMS. Another 24 SD rats were equally divided into CUMS + GFP, CUMS + GFP + EA, and CUMS + shBcan + EA groups. Behavioral tests were conducted to assess depression-like behavior. Western blot analysis was used to evaluate the expression of brevican, aggrecan, GLuA1, and PSD95 in mPFC subregions. Results: Behavioral parameter evaluation show that rats in the shBcan + CUMS group exhibited a significantly reduced sucrose preference (P = .0002) and increased immobility time (P = .0011) compared to those in rats in the GFP + CUMS group. Western blotting showed that brevican expression was significantly downregulated in the PrL of the shBcan + CUMS group compared with that in the GFP + CUMS group (P = .0192). Furthermore, compared to the CUMS + GFP + EA group, the CUMS + shBcan + EA group exhibited a significantly decreased sucrose preference (P = .0334), increased immobility time (P = .0465), and increased latency to food (P = .0261). In the CUMS + shBcan + EA group, the EA-induced brevican and PSD95 overexpression was reversed, compared with that in the CUMS + GFP + EA group (P = .0454 and P = .0198, respectively). Conclusion: EA exerts its antidepressant effects through the modulation of brevican expression in rats. Our findings highlight the important role for brevican in stress susceptibility, which could be a potential target for treating depression.
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- 2024
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18. Safety of Early Decompression in Patients Undergoing Coronary Intervention via Distal Radial Artery
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Hongmei Sun, Dongmei Xu, Zairan Zhang, Qingqing He, and Xinyue Zhang
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distal radial artery ,early decompression ,coronary intervention ,safety ,Geriatrics ,RC952-954.6 - Abstract
Objective To investigate the safety of different time decompression in patients undergoing coronary intervention via distal radial artery. Methods From December 2022 to December 2023, a total of 139 patients undergoing coronary intervention through distal radial artery in the department of cardiovascular medicine of the First Affiliated Hospital of Nanjing Medical University were selected and divided into three groups by the random number table method. Group A, 47 cases, underwent first decompression 30 minutes after operation. Group B, 47 cases, underwent initial decompression 1 h after operation. Group C, 45 cases, underwent initial decompression 2 h after operation. Postoperative limb pain score, comfort score and palm-diameter swelling rate immediately after operation, 30 min, 1 h, 2 h and 4 h, and postoperative puncture bleeding were compared among the three groups. Results Immediately after operation, the pain score, comfort score and the swelling rate of the circumference of the palm among the three groups showed no statistical significance (P > 0.05) . The limb pain score of group A at 30 min, 1 h, 2 h and 4 h after operation was lower than that in group B and group C (P < 0.05), and the comfort score was higher than that in group B and group C (P < 0.05) . The swelling rate of the palms of group A at 1 h, 2 h and 4 h after operation was lower than that in group B and group C (P < 0.05) . There was no significant difference in postoperative bleeding among the three groups (P > 0.05) . Conclusion The first decompression within 30 minutes after operation is safe and effective for patients undergoing coronary intervention through distal radial artery, which can significantly relieve pain, swelling discomfort and improve comfort, and is worthy of promotion in clinical work.
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- 2024
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19. Reactivity and DNA Damage by Independently Generated 2′-Deoxycytidin-N4-yl Radical
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Hongmei Su, Ifor P. Mortimer, Zehan Ma, Marc M. Greenberg, Jialong Jie, and Haihui Peng
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chemistry.chemical_classification ,DNA damage ,Radical ,General Chemistry ,Photochemistry ,Biochemistry ,Catalysis ,Nucleobase ,Thymine ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Radical ion ,chemistry ,Flash photolysis ,Nucleotide ,Methyl group - Abstract
Oxidative stress produces a variety of radicals in DNA, including pyrimidine nucleobase radicals. The nitrogen-centered DNA radical 2'-deoxycytidin-N4-yl radical (dC·) plays a role in DNA damage mediated by one electron oxidants, such as HOCl and ionizing radiation. However, the reactivity of dC· is not well understood. To reduce this knowledge gap, we photochemically generated dC· from a nitrophenyl oxime nucleoside and within chemically synthesized oligonucleotides from the same precursor. dC· formation is confirmed by transient UV-absorption spectroscopy in laser flash photolysis (LFP) experiments. LFP and duplex DNA cleavage experiments indicate that dC· oxidizes dG. Transient formation of the dG radical cation (dG+•) is observed in LFP experiments. Oxidation of the opposing dG in DNA results in hole transfer when the opposing dG is part of a dGGG sequence. The sequence dependence is attributed to a competition between rapid proton transfer from dG+• to the opposing dC anion formed and hole transfer. Enhanced hole transfer when less acidic O6-methyl-2'-deoxyguanosine is opposite dC· supports this proposal. dC· produces tandem lesions in sequences containing thymidine at the 5'-position by abstracting a hydrogen atom from the thymine methyl group. The corresponding thymidine peroxyl radical completes tandem lesion formation by reacting with the 5'-adjacent nucleotide. As dC· is reduced to dC, its role in the process is traceless and is only detectable because of the ability to independently generate it from a stable precursor. These experiments reveal that dC· oxidizes neighboring nucleotides, resulting in deleterious tandem lesions and hole transfer in appropriate sequences.
- Published
- 2021
20. TiO
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Qian, Zhou, Tianfeng, Zhang, Jialong, Jie, Yue, Hou, Zheng, Hu, Zeqing, Jiao, and Hongmei, Su
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Pyrimidine Dimers ,Ultraviolet Rays ,Humans ,Deoxyribodipyrimidine Photo-Lyase ,DNA Damage - Abstract
Cyclobutane pyrimidine dimer (CPD) is the most abundant DNA photolesion, and it can be repaired by photolyases based on electron-transfer mechanisms. However, photolyase is absent in the human body and lacks stability for applications. Can one develop natural enzyme mimetics utilizing nanoparticles (termed nanozymes) to mimic photolyase in repairing DNA damage? Herein, we observe the successful reversal of thymine dimer TT to normal T base by TiO
- Published
- 2022
21. Low Energy Photoionization of Phosphorothioate DNA-Oligomers and Ensuing Hole Transfer
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Zheng Hu, Qian Zhou, Zeqing Jiao, Peixuan Qin, Fei Wang, Ye Xia, Tianfeng Zhang, Jialong Jie, and Hongmei Su
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Spectrum Analysis ,Materials Chemistry ,DNA ,Physical and Theoretical Chemistry ,Oxidation-Reduction ,Surfaces, Coatings and Films ,Phosphates - Abstract
Phosphorothioate (PS) modified oligonucleotides (S-DNA) naturally exist in bacteria and archaea genome and are widely used as an antisense strategy in gene therapy. However, the introduction of PS as a redox active site may trigger distinct UV photoreactions. Herein, by time-resolved spectroscopy, we observe that 266 nm excitation of S-DNA d(A
- Published
- 2022
22. Ultrafast excited state dynamics and light-switching of [Ru(phen)2(dppz)]2+ in G-quadruplex DNA
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Hongmei Su, Hongmei Zhao, Chun-Hua Huang, Chunfan Yang, Qian Zhou, Ben-Zhan Zhu, and Ze-Qing Jiao
- Subjects
010405 organic chemistry ,Ligand ,Stacking ,chemistry.chemical_element ,General Chemistry ,Nanosecond ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Ruthenium ,Chemistry ,Dark state ,chemistry ,Excited state ,Materials Chemistry ,Environmental Chemistry ,Molecule ,Luminescence ,QD1-999 - Abstract
The triplet metal to ligand charge transfer (3MLCT) luminescence of ruthenium (II) polypyridyl complexes offers attractive imaging properties, specifically towards the development of sensitive and structure-specific DNA probes. However, rapidly-deactivating dark state formation may compete with 3MLCT luminescence depending on different DNA structures. In this work, by combining femtosecond and nanosecond pump-probe spectroscopy, the 3MLCT relaxation dynamics of [Ru(phen)2(dppz)]2+ (phen = 1,10-phenanthroline, dppz = dipyridophenazine) in two iconic G-quadruplexes has been scrutinized. The binding modes of stacking of dppz ligand on the terminal G-quartet fully and partially are clearly identified based on the biexponential decay dynamics of the 3MLCT luminescence at 620 nm. Interestingly, the inhibited dark state channel in ds-DNA is open in G-quadruplex, featuring an ultrafast picosecond depopulation process from 3MLCT to a dark state. The dark state formation rates are found to be sensitive to the content of water molecules in local G-quadruplex structures, indicating different patterns of bound water. The unique excited state dynamics of [Ru(phen)2(dppz)]2+ in G-quadruplex is deciphered, providing mechanistic basis for the rational design of photoactive ruthenium metal complexes in biological applications. Photoactive ruthenium metal complexes are relevant luminescent DNA markers, but deciphering their local excited state dynamics in complex biochemical environments is challenging. Here the authors combine femtosecond and nanosecond pump-probe spectroscopy to elucidate the local hydration effects and 3MLCT relaxation dynamics of [Ru(phen)2(dppz)]2+ in two G-quadruplexes.
- Published
- 2021
23. Exploring Agrobacterium-mediated genetic transformation methods and its applications in Lilium
- Author
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Xinyue Fan and Hongmei Sun
- Subjects
Agrobacterium tumefaciens ,Genetically modified ,Genetic transformation ,Lily ,Transgenic plants ,CRISPR‒Cas9 ,Plant culture ,SB1-1110 ,Biology (General) ,QH301-705.5 - Abstract
Abstract As a typical bulb flower, lily is widely cultivated worldwide because of its high ornamental, medicinal and edible value. Although breeding efforts evolved over the last 10000 years, there are still many problems in the face of increasing consumer demand. The approach of biotechnological methods would help to solve this problem and incorporate traits impossible by conventional breeding. Target traits are dormancy, development, color, floral fragrance and resistances against various biotic and abiotic stresses, so as to improve the quality of bulbs and cut flowers in planting, cultivation, postharvest, plant protection and marketing. Genetic transformation technology is an important method for varietal improvement and has become the foundation and core of plant functional genomics research, greatly assisting various plant improvement programs. However, achieving stable and efficient genetic transformation of lily has been difficult worldwide. Many gene function verification studies depend on the use of model plants, which greatly limits the pace of directed breeding and germplasm improvement in lily. Although significant progress has been made in the development and optimization of genetic transformation systems, shortcomings remain. Agrobacterium-mediated genetic transformation has been widely used in lily. However, severe genotypic dependence is the main bottleneck limiting the genetic transformation of lily. This review will summarizes the research progress in the genetic transformation of lily over the past 30 years to generate the material including a section how genome engineering using stable genetic transformation system, and give an overview about recent and future applications of lily transformation. The information provided in this paper includes ideas for optimizing and improving the efficiency of existing genetic transformation methods and for innovation, provides technical support for mining and identifying regulatory genes for key traits, and lays a foundation for genetic improvement and innovative germplasm development in lily.
- Published
- 2024
- Full Text
- View/download PDF
24. New insight into oxidative stress and inflammatory responses to kidney stones: Potential therapeutic strategies with natural active ingredients
- Author
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Yue Sun, Hongmei Sun, Zhengze Zhang, Futing Tan, Yunxia Qu, Xiaojing Lei, Qingzhu Xu, Jiangtao Wang, Lindan Shu, Huai Xiao, Zhibin Yang, and Heng Liu
- Subjects
kidney stones ,oxidative stress ,inflammatory response ,natural active ingredients ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Kidney stones, a prevalent urological disorder, are closely associated with oxidative stress (OS) and the inflammatory response. Recent research in the field of kidney stone treatment has indicated the potential of natural active ingredients to modulate OS targets and the inflammatory response in kidney stones. Oxidative stress can occur through various pathways, increasing the risk of stone formation, while the inflammatory response generated during kidney stone formation further exacerbates OS, forming a detrimental cycle. Both antioxidant systems related to OS and inflammatory mediators associated with inflammation play roles in the pathogenesis of kidney stones. Natural active ingredients, abundant in resources and possessing antioxidative and anti-inflammatory properties, have the ability to decrease the risk of stone formation and improve prognosis by reducing OS and suppressing pro-inflammatory cytokine expression or pathways. Currently, numerous developed natural active ingredients have been clinically applied and demonstrated satisfactory therapeutic efficacy. This review aims to provide novel insights into OS and inflammation targets in kidney stones as well as summarize research progress on potential therapeutic strategies involving natural active ingredients. Future studies should delve deeper into exploring efficacy and mechanisms of action of diverse natural active ingredients, proposing innovative treatment strategies for kidney stones, and continuously uncovering their potential applications.
- Published
- 2024
- Full Text
- View/download PDF
25. ESP–ALIE Analysis as a Theoretical Tool for Identifying the Coordination Atoms of Possible Multisite Extractants: Validation and Prediction
- Author
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Qi Wang, Min Wang, Hongmei Su, Guanju Zhang, Yang Yang, Ning Wang, Wenhui Liu, and Yan Yan
- Subjects
Green engineering ,Green chemistry ,Materials science ,Renewable Energy, Sustainability and the Environment ,General Chemical Engineering ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Quantum chemistry ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Simple (abstract algebra) ,Chemical physics ,Ionic liquid ,X-ray crystallography ,Environmental Chemistry ,0210 nano-technology ,Solvent extraction - Abstract
In the sense of green chemistry and green engineering, it is of great significance to obtain a simple and practicable quantum chemistry approach for extractant prescreening toward platinum group me...
- Published
- 2020
26. Deprotonation of Guanine Radical Cation G•+ Mediated by the Protonated Water Cluster
- Author
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Jialong Jie, Di Song, Hongmei Su, and Xianwang Zhang
- Subjects
010304 chemical physics ,Proton ,Chemistry ,Guanine ,Protonation ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Chemical reaction ,0104 chemical sciences ,chemistry.chemical_compound ,Deprotonation ,Radical ion ,0103 physical sciences ,Molecule ,Water cluster ,Physical and Theoretical Chemistry - Abstract
Proton transfer is regarded as a fundamental process in chemical reactions of DNA molecules and continues to be an active research theme due to the connection with charge transport and oxidation da...
- Published
- 2020
27. Independent Generation and Time‐Resolved Detection of 2′‐Deoxyguanosin‐ N2 ‐yl Radicals
- Author
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Liwei Zheng, Hongmei Su, Xiaojuan Dai, and Marc M. Greenberg
- Subjects
Photolysis ,Free Radicals ,010405 organic chemistry ,Hydroxyl Radical ,Ultraviolet Rays ,Radical ,Reactive intermediate ,Deoxyguanosine ,General Chemistry ,General Medicine ,010402 general chemistry ,Hydrogen atom abstraction ,Photochemistry ,01 natural sciences ,Tautomer ,Catalysis ,Article ,0104 chemical sciences ,Nucleobase ,chemistry.chemical_compound ,chemistry ,Flash photolysis ,Hydroxyl radical ,Spectrophotometry, Ultraviolet - Abstract
Guanine radicals are important reactive intermediates in DNA damage. Hydroxyl radical (HO. ) has long been believed to react with 2'-deoxyguanosine (dG) generating 2'-deoxyguanosin-N1-yl radical (dG(N1-H). ) via addition to the nucleobase π-system and subsequent dehydration. This basic tenet was challenged by an alternative mechanism, in which the major reaction of HO. with dG was proposed to involve hydrogen atom abstraction from the N2-amine. The 2'-deoxyguanosin-N2-yl radical (dG(N2-H). ) formed was proposed to rapidly tautomerize to dG(N1-H). . We report the first independent generation of dG(N2-H). in high yield via photolysis of 1. dG(N2-H). is directly observed upon nanosecond laser flash photolysis (LFP) of 1. The absorption spectrum of dG(N2-H). is corroborated by DFT studies, and anti- and syn-dG(N2-H). are resolved for the first time. The LFP experiments showed no evidence for tautomerization of dG(N2-H). to dG(N1-H). within hundreds of microseconds. This observation suggests that the generation of dG(N1-H). via dG(N2-H). following hydrogen atom abstraction from dG is unlikely to be a major pathway when HO. reacts with dG.
- Published
- 2020
28. Rational design of an 'all-in-one' phototheranostic
- Author
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Lei Kang, Hongmei Su, Jonathan L. Sessler, Cuicui Li, Song Gao, Yan Wang, Zi-Shu Yang, Bing-Wu Wang, Adam C. Sedgwick, Jun-Long Zhang, Ye Xia, and Yuhang Yao
- Subjects
Photoexcitation ,Lanthanide ,Chemistry ,Materials science ,Intersystem crossing ,Rational design ,Nanoparticle ,Chemical stability ,General Chemistry ,Mesoporous silica ,Photochemistry ,Fluorescence - Abstract
We report here porphodilactol derivatives and their corresponding metal complexes. These systems show promise as “all-in-one” phototheranostics and are predicated on a design strategy that involves controlling the relationship between intersystem crossing (ISC) and photothermal conversion efficiency following photoexcitation. The requisite balance was achieved by tuning the aromaticity of these porphyrinoid derivatives and forming complexes with one of two lanthanide cations, namely Gd3+ and Lu3+. The net result led to a metalloporphodilactol system, Gd-trans-2, with seemingly optimal ISC efficiency, photothermal conversion efficiency and fluorescence properties, as well as good chemical stability. Encapsulation of Gd-trans-2 within mesoporous silica nanoparticles (MSN) allowed its evaluation for tumour diagnosis and therapy. It was found to be effective as an “all-in-one” phototheranostic that allowed for NIR fluorescence/photoacoustic dual-modal imaging while providing an excellent combined PTT/PDT therapeutic efficacy in vitro and in vivo in 4T1-tumour-bearing mice., We report here porphodilactol derivatives and their corresponding metal complexes as “all-in-one” phototheranostics by controlling the relationship between intersystem crossing (ISC) and photothermal conversion efficiency following photoexcitation.
- Published
- 2020
29. Behavior, mechanism and equilibrium studies of Au(<scp>iii</scp>) extraction with an ionic liquid [C4-6-C4BIm]Br2
- Author
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Qi Wang, Ning Wang, Yang Yang, and Hongmei Su
- Subjects
Inorganic Chemistry ,Exothermic reaction ,chemistry.chemical_compound ,Langmuir ,Materials science ,chemistry ,Ion exchange ,Extraction (chemistry) ,Ionic liquid ,Proton NMR ,Physical chemistry ,Freundlich equation ,Fourier transform infrared spectroscopy - Abstract
The first gemini-type benzimidazole ionic liquid ([C4-6-C4BIm]Br2) with two sites of action was synthesized and applied for gold extraction. The effects of [C4-6-C4BIm]Br2 concentration, initial gold(III) concentration, acidity, and the loading capacity of [C4-6-C4BIm]Br2 were examined in detail. It was found that [C4-6-C4BIm]Br2 has excellent extraction ability for obtaining high purity gold. The anion exchange mechanism between [C4-6-C4BIm]Br2 and Au(III) was proved by Job's method and 1H NMR and FTIR spectroscopy. Quantum chemical calculations were carried out to prove the mechanism theoretically. The extraction equilibrium process was modeled using Langmuir and Freundlich isotherms. Thermodynamic parameters ΔH, ΔG and ΔS indicated that the extraction process was exothermic and spontaneous. The pseudo-second-order kinetic model well fitted the experimental data (R = 0.99). In addition, [C4-6-C4BIm]Br2 has high selectivity for Au(III) compared to other base metals. In summary, [C4-6-C4BIm]Br2 has great application prospects in industry due to its excellent characteristics such as low cost, easy availability, and high extraction capacity.
- Published
- 2020
30. Sequence-specific binding behavior of coralyne toward triplex DNA: An ultrafast time-resolved fluorescence spectroscopy study
- Author
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Zeqing Jiao, Chunfan Yang, Qian Zhou, Zheng Hu, Jialong Jie, Xianwang Zhang, and Hongmei Su
- Subjects
General Physics and Astronomy ,Physical and Theoretical Chemistry - Abstract
Triplex DNA structure has potential therapeutic application in inhibiting the expression of genes involved in cancer and other diseases. As a DNA-targeting antitumor and antibiotic drug, coralyne shows a remarkable binding propensity to triplex over canonical duplex and thus can modulate the stability of triplex structure, providing a prospective gene targeting strategy. Much less is known, however, about coralyne-binding interactions with triplex. By combining multiple steady-state spectroscopy with ultrafast fluorescence spectroscopy, we have investigated the binding behaviors of coralyne with typical triplexes. Upon binding with a G-containing triplex, the fluorescence of coralyne is markedly quenched owing to the photoinduced electron transfer (PET) of coralyne with the G base. Systematic studies show that the PET rates are sensitive to the binding configuration and local microenvironment, from which the coexisting binding modes of monomeric (full and partial) intercalation and aggregate stacking along the sugar-phosphate backbone are distinguished and their respective contributions are determined. It shows that coralyne has preferences for monomeric intercalation within CGG triplex and pure TAT triplex, whereas CGC+ triplex adopts mainly backbone binding of coralyne aggregates due to charge repulsion, revealing the sequence-specific binding selectivity. The triplex-DNA-induced aggregation of coralyne could be used as a probe for recognizing the water content in local DNA structures. The strong π–π stacking of intercalated coralyne monomer with base-triplets plays an important role in stabilizing the triplex structure. These results provide mechanistic insights for understanding the remarkable propensity of coralyne in selective binding to triplex DNA and shed light on the prospective applications of coralyne-triplex targeted anti-gene therapeutics.
- Published
- 2023
31. Free-Radical-Mediated Photoinduced Electron Transfer between 6-Thioguanine and Tryptophan Leading to DNA-Protein-Like Cross-Link
- Author
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Junjie Dong, Chunhua Huang, Shaoshi Guo, Ye Xia, Yue Hou, Chunfan Yang, Xianwang Zhang, Jialong Jie, Ben-Zhan Zhu, and Hongmei Su
- Subjects
Electron Transport ,Materials Chemistry ,Tryptophan ,Electrons ,DNA ,Physical and Theoretical Chemistry ,Thioguanine ,Surfaces, Coatings and Films - Abstract
The nucleobase analog 6-thioguanine (6-TG) has emerged as important immunosuppressant, anti-inflammatory, and anticancer drug in the past few decades, but its unique photosensitivity of absorbing strongly ultraviolet UVA light elicits photochemical hazards in many ways. The particularly intriguing yet unresolved question is whether the direct photoreaction of 6-TG can promote DNA-protein cross-links (DPCs) formation, which are large DNA adducts blocking DNA replication and physically impede DNA-related processes. Herein, by real-time observation of radical intermediates using time-resolved UV-vis absorption spectroscopy in conjunction with product analysis by HPLC-MS, we discover that UVA excitation of 6-TG triggers direct covalent cross-linking with tryptophan (TrpH) via an exquisite radical mechanism of electron transfer. The photoexcitation prepares the redox-active triplet
- Published
- 2021
32. Reactivity and DNA Damage by Independently Generated 2'-Deoxycytidin
- Author
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Haihui, Peng, Jialong, Jie, Ifor P, Mortimer, Zehan, Ma, Hongmei, Su, and Marc M, Greenberg
- Subjects
Photolysis ,Free Radicals ,Ultraviolet Rays ,Oximes ,Deoxyguanosine ,DNA ,Deoxycytidine ,Article ,DNA Damage - Abstract
Oxidative stress produces a variety of radicals in DNA, including pyrimidine nucleobase radicals. The nitrogen-centered DNA radical 2′-deoxycytidin-N4-yl radical (dC·) plays a role in DNA damage mediated by one electron oxidants, such as HOCl and ionizing radiation. However, the reactivity of dC· is not well understood. To reduce this knowledge gap, we photochemically generated dC· from a nitrophenyl oxime nucleoside and within chemically synthesized oligonucleotides from the same precursor. dC· formation is confirmed by transient UV-absorption spectroscopy in laser flash photolysis (LFP) experiments. LFP and duplex DNA cleavage experiments indicate that dC· oxidizes dG. Transient formation of the dG radical cation (dG(+•)) is observed in LFP experiments. Oxidation of the opposing dG in DNA results in hole transfer when the opposing dG is part of a dGGG sequence. The sequence dependence is attributed to a competition between rapid proton transfer from dG(+•) to the opposing dC anion formed and hole transfer. Enhanced hole transfer when less acidic O6-methyl-2′-deoxyguanosine is opposite dC· supports this proposal. dC· produces tandem lesions in sequences containing thymidine at the 5′-position by abstracting a hydrogen atom from the thymine methyl group. The corresponding thymidine peroxyl radical completes tandem lesion formation by reacting with the 5′-adjacent nucleotide. As dC· is reduced to dC, its role in the process is traceless and is only detectable because of the ability to independently generate it from a stable precursor. These experiments reveal that dC· oxidizes neighboring nucleotides, resulting in deleterious tandem lesions and hole transfer in appropriate sequences.
- Published
- 2021
33. Multifunctional Bi2S3-Au nanoclusters for fluorescence/infrared thermal imaging guided photothermal therapy
- Author
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Hongmei Sun, Yuyu Cao, Beibei Zhai, Xiaoshuang Zhao, Xuejun Zhang, and Jiangtao Su
- Subjects
Photothermal therapy ,Fluorescence imaging ,Infrared thermal imaging ,Bi2S3-Au nanoclusters ,Multifunctional ,Pharmacy and materia medica ,RS1-441 - Abstract
Nanotechnology has attracted extensive attention in the diagnosis and treatment of cancer. Therefore, the research aimed at developing new nanomaterials and exploring their applications in biomedicine has attracted more attention. In this study, Bi2S3-Au nanoclusters (Bi2S3-AuNCs) as fluorescence/infrared thermal imaging-guided photothermal therapy (PTT) was prepared for the first time. It was achieved in a facile and mild way by optimizing the amount of Bi3+ and Au3+ using bovine serum albumin (BSA) as reducer and stabilizer. The as-prepared Bi2S3-AuNCs with special morphology showed high stability, excellent biocompatibility and good photostability. Apart from these, it also can accumulate at tumor sites and exhibit considerable fluorescence/infrared thermal imaging-guided PTT. Bi2S3-AuNCs nanoparticles integrate imaging and therapeutic functions into an advanced application platform, which provides the possibility to build a novel nano-cancer diagnosis and treatment platform.
- Published
- 2024
- Full Text
- View/download PDF
34. Sulfur-centered hemi-bond radicals as active intermediates in S-DNA phosphorothioate oxidation
- Author
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Hongmei Zhao, Ye Xia, Ben-Zhan Zhu, Chunfan Yang, Hongmei Su, Chun-Hua Huang, Kunhui Liu, Jialong Jie, and Di Song
- Subjects
DNA, Bacterial ,Guanine ,Stereochemistry ,Radical ,chemistry.chemical_element ,Phosphorothioate Oligonucleotides ,Bacterial genome size ,Biology ,010402 general chemistry ,01 natural sciences ,Adduct ,chemistry.chemical_compound ,Chemical Biology and Nucleic Acid Chemistry ,Genetics ,Moiety ,Transfer technique ,Bacteria ,010405 organic chemistry ,Spectrum Analysis ,Sulfur ,0104 chemical sciences ,chemistry ,Nucleic Acid Conformation ,Oxidation-Reduction ,DNA ,Genome, Bacterial - Abstract
Phosphorothioate (PS) modifications naturally appear in bacteria and archaea genome and are widely used as antisense strategy in gene therapy. But the chemical effects of PS introduction as a redox active site into DNA (S-DNA) is still poorly understood. Herein, we perform time-resolved spectroscopy to examine the underlying mechanisms and dynamics of the PS oxidation by potent radicals in free model, in dinucleotide, and in S-oligomer. The crucial sulphur-centered hemi-bonded intermediates -P–S∴S–P- were observed and found to play critical roles leading to the stable adducts of -P–S–S–P-, which are backbone DNA lesion products. Moreover, the oxidation of the PS moiety in dinucleotides d[GPSG], d[APSA], d[GPSA], d[APSG] and in S-oligomers was monitored in real-time, showing that PS oxidation can compete with adenine but not with guanine. Significantly, hole transfer process from A+• to PS and concomitant -P–S∴S–P- formation was observed, demonstrating the base-to-backbone hole transfer unique to S-DNA, which is different from the normally adopted backbone-to-base hole transfer in native DNA. These findings reveal the distinct backbone lesion pathway brought by the PS modification and also imply an alternative -P–S∴S–P-/-P–S–S–P- pathway accounting for the interesting protective role of PS as an oxidation sacrifice in bacterial genome.
- Published
- 2019
35. Triplet Excited State Enhancement Induced by PDDA Polymer-Assembled Gold Nanoparticles
- Author
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Xiaojuan Dai, Shaoshi Guo, Chunfan Yang, Xianwang Zhang, Hongmei Su, Chen Wang, and Kunhui Liu
- Subjects
Materials science ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,PDDA polymer ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,General Energy ,Colloidal gold ,Excited state ,Physical and Theoretical Chemistry ,0210 nano-technology ,Excitation ,Localized surface plasmon - Abstract
Gold nanoparticles (AuNPs) have unique optical properties because of their characteristic localized surface plasmon resonances (LSPRs). Upon the excitation of LSPR, AuNPs can affect the adjacent or...
- Published
- 2019
36. Neutral‐Eosin‐Y‐Photocatalyzed Silane Chlorination Using Dichloromethane
- Author
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Zeqing Jiao, Wei-Hai Fang, Ganglong Cui, Jin Da Tan, Tingting Yang, Wengang Xu, Hongmei Su, Jie Wu, Xiaojuan Dai, Xuan-Zi Fan, and Pin Xiao
- Subjects
Silylation ,010405 organic chemistry ,Radical ,General Chemistry ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Silane ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Reagent ,Photocatalysis ,Organic synthesis ,Eosin Y ,Dichloromethane - Abstract
Chlorosilanes are versatile reagents in organic synthesis and material science. A mild pathway is now reported for the quantitative conversion of hydrosilanes to silyl chlorides under visible-light irradiation using neutral eosin Y as a hydrogen-atom-transfer photocatalyst and dichloromethane as a chlorinating agent. Stepwise chlorination of di- and trihydrosilanes was achieved in a highly selective fashion assisted by continuous-flow micro-tubing reactors. The ability to access silyl radicals using photocatalytic Si-H activation promoted by eosin Y offers new perspectives for the synthesis of valuable silicon reagents in a convenient and green manner.
- Published
- 2019
37. Neutral‐Eosin‐Y‐Photocatalyzed Silane Chlorination Using Dichloromethane
- Author
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Xuanzi Fan, Pin Xiao, Zeqing Jiao, Tingting Yang, Xiaojuan Dai, Wengang Xu, Jin Da Tan, Ganglong Cui, Hongmei Su, Weihai Fang, and Jie Wu
- Subjects
General Medicine - Published
- 2019
38. Capturing the Long-Lived Photogenerated Electrons in Au/TiO2 upon UV or Visible Irradiation by Time-Resolved Infrared Spectroscopy
- Author
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Hongmei Su, Chen Wang, Zeqing Jiao, Xiaojuan Dai, Kunhui Liu, and Zehan Ma
- Subjects
Materials science ,Nanoparticle ,Infrared spectroscopy ,02 engineering and technology ,Photoelectric effect ,Nanosecond ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,General Energy ,Photocatalysis ,Irradiation ,Physical and Theoretical Chemistry ,0210 nano-technology ,Spectroscopy ,Absorption (electromagnetic radiation) - Abstract
Gold nanoparticle modifications for TiO2 (Au/TiO2) can extend the absorption wavelength from UV to visible (Vis) and enhance the photocatalytic performance, thus fueling increasing attention as an emerging photocatalysis strategy. To explore the plasmon-enhanced photocatalytic mechanism and directly unveil the intrinsic properties of Au/TiO2, the decay kinetics of photoelectrons upon UV (355 nm) or Vis (532 nm) excitation are monitored by means of nanosecond time-resolved infrared spectroscopy, which is a unique tool offering observations without interference of the holes. Under UV irradiation, the longer lifetime of photoelectrons observed in Au/TiO2 compared to that in bare TiO2 provides unambiguous evidence for the enhanced charge separation by AuNPs. Under Vis irradiation, the long-lived (hundreds of microseconds) electrons produced by injection from AuNPs into TiO2 upon plasmon excitation are here detected for the first time. Moreover, the effects of TiO2 phase composition and the amount of AuNPs loa...
- Published
- 2019
39. Preferential Binding of π-Ligand Porphyrin Targeting 5′-5′ Stacking Interface of Human Telomeric RNA G-Quadruplex Dimer
- Author
-
Shaoshi Guo, Ye Xia, Hongmei Su, Chunfan Yang, Di Song, and Qige Qi
- Subjects
Models, Molecular ,0301 basic medicine ,Porphyrins ,Stereochemistry ,Dimer ,Stacking ,Ligands ,010402 general chemistry ,G-quadruplex ,01 natural sciences ,Structure-Activity Relationship ,03 medical and health sciences ,chemistry.chemical_compound ,Humans ,heterocyclic compounds ,General Materials Science ,Physical and Theoretical Chemistry ,Base Sequence ,Molecular Structure ,030102 biochemistry & molecular biology ,RNA ,Preferential binding ,Telomere ,Ligand (biochemistry) ,Porphyrin ,Intercalating Agents ,0104 chemical sciences ,G-Quadruplexes ,Kinetics ,chemistry ,Dimerization - Abstract
Human telomeric RNA (TERRA) containing thousands of G-rich repeats has the propensity to form parallel-stranded G-quadruplexes. The emerging crucial roles of TERRA G-quadruplexes in RNA biology fuel increasing attention for studying anticancer ligand binding with such structures, which, however, remains scarce. Here we utilized multiple steady-state and time-resolved spectroscopy analyses in conjunction with NMR methods and investigated thoroughly the binding behavior of TMPyP4 to a TERRA G-quadruplex dimer formed by the 10-nucleotide sequence r(GGGUUAGGGU). It is clearly identified that TMPyP4 intercalates into the 5'-5' stacking interface of two G-quadruplex blocks with a binding stoichiometry of 1:1 and binding constant of 1.92 × 10
- Published
- 2019
40. Monitoring the Structure-Dependent Reaction Pathways of Guanine Radical Cations in Triplex DNA: Deprotonation Versus Hydration
- Author
-
Hongmei Su, Qian Zhou, Hongmei Zhao, Xiaojuan Dai, Kunhui Liu, Di Song, and Yinghui Wang
- Subjects
Guanine ,Free Radicals ,010304 chemical physics ,DNA damage ,Stereochemistry ,Triplex DNA ,Water ,DNA ,010402 general chemistry ,Antiparallel (biochemistry) ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,chemistry.chemical_compound ,Deprotonation ,chemistry ,Duplex (building) ,Reaction dynamics ,Cations ,0103 physical sciences ,Materials Chemistry ,Nucleic Acid Conformation ,Physical and Theoretical Chemistry - Abstract
Exposure of DNA to one-electron oxidants leads initially to the formation of guanine radical cations (G•+), which may degrade by deprotonation or hydration and ultimately cause strand breaks or 8-oxoG lesions. As the structure is dramatically changed by binding of the third strand in the major groove of the target duplex, it makes the triplex an interesting DNA structure to be examined and compared with the duplex on the G•+ degradation pathways. Here, we report for the first time the time-resolved spectroscopy study on the G•+ reaction dynamics in triplex DNA together with the Fourier transform infrared characterization of steady-state products, from which structural effects on the reactivity of G•+ are unraveled. For an antiparallel triplex-containing GGC motif, G•+ mainly suffers from fast deprotonation (9.8 ± 0.2) × 106 s-1, featuring release of both N1-H and N2-H of G in the third strand directly into bulk water. The much faster and distinct deprotonation behavior compared to the duplex should be related to long-resident water spines in the third strand. The G•+ hydration product 8-oxoG is negligible for an antiparallel triplex; instead, the 5-HOO-(G-H) hydroperoxide formed after G•+ deprotonation is identified by its vibrational marker band. In contrast, in a parallel triplex (C+GC), the deprotonation of G•+ occurs slowly (6.0 ± 0.3) × 105 s-1 with the release of N1-H, while G•+ hydration becomes the major pathway with yields of 8-oxoG larger than in the duplex. The increased positive charge brought by the third strand makes the G radical in the parallel triplex sustain more cation character and prone for hydration. These results indicate that non-B DNA (triplex) plays an important role in DNA damage formation and provide mechanistic insights to rationalize why triplex structures might become hot spots for mutagenesis.
- Published
- 2019
41. pH Controlled Intersystem Crossing and Singlet Oxygen Generation of 8-Azaadenine in Aqueous Solution
- Author
-
Hongmei Su, Xueli Wang, Zhongneng Zhou, Jianhua Xu, Menghui Jia, Jinquan Chen, Zhubin Hu, Xianwang Zhang, and Haitao Sun
- Subjects
Aqueous solution ,Singlet oxygen ,02 engineering and technology ,Time-dependent density functional theory ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,Internal conversion (chemistry) ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,chemistry.chemical_compound ,Intersystem crossing ,chemistry ,Excited state ,Physical and Theoretical Chemistry ,Triplet state ,0210 nano-technology ,Ground state - Abstract
Azabases are intriguing DNA and RNA analogues and have been used as effective antiviral and anticancer medicines. However, photosensitivity of these drugs has also been reported. Here, pH-controlled intersystem crossing (ISC) process of 9H 8-azaadenine (8-AA) in aqueous solution is reported. Broadband transient absorption measurements reveal that the hydrogen atom at N9 position can greatly affect ISC of 8-AA and ISC is more favorable when 8-AA is in its neutral form in aqueous solution. The initial excited ππ* (S2 ) state evolves through ultrafast internal conversion (IC) (4.2 ps) to the lower-lying nπ* state (S1 ), which further stands as a door way state for ISC with a time constant of 160 ps. The triplet state has a lifetime of 6.1 μs. On the other hand, deprotonation at N9 position promotes the IC from the ππ* (S2 ) state to the ground state (S0 ) and the lifetime of the S2 state is determined to be 10 ps. The experimental results are further supported by time-dependent density functional theory (TDDFT) calculations. Singlet oxygen generation yield is measured to be 13.8 % for the neutral 8-AA while the deprotonated one exhibit much lower yield (
- Published
- 2019
42. Reaction kinetics between thiobases and singlet oxygen studied by direct detection of the 1O2 luminescence decay
- Author
-
Kunhui Liu, Fei Wang, Ren-nian Wang, Hongmei Su, and Ye Xia
- Subjects
Singlet oxygen ,Kinetics ,Quantum yield ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Reaction rate ,Chemical kinetics ,chemistry.chemical_compound ,Reaction rate constant ,chemistry ,Physical and Theoretical Chemistry ,Triplet state ,0210 nano-technology ,Luminescence - Abstract
Thiobase derivatives have received important investigations due to their wide usage as phototherapeutic agents and their potential carcinogenic side effects as immunosuppressants. The substitution of oxygen atom by the sulfur atom makes the ultraviolet absorption of thiobases redshifted and absorbs UVA light (>300 nm), resulting in unusual high quantum yield of triplet state to generate the singlet oxygen (1O2) through photosensitization. As a type of reactive oxygen species, 1O2 is highly reactive toward thiobases. Herein, we report the measurements of reaction rate constants between different thiobases and 1O2 in different solvents through the direct detection of 1O2 luminescence decay kinetics at 1270 nm. The rate constants of thiouracils with 1O2 are five times smaller than that of thioguanine with 1O2, which suggests that thiopurines are more reactive than thiopyrimidines and thus less suitable to be a photosensitive drug on the application of photodynamic therapy. Additionally, the rate constants of thiobases and 1O2 were found to be obviously influenced by the solvent polarity. With the increase of solvent polarity, the rate constants of thiobases and 1O2 decrease.
- Published
- 2019
43. Degradation of Cytosine Radical Cations in 2′-Deoxycytidine and in i-Motif DNA: Hydrogen-Bonding Guided Pathways
- Author
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Di Song, Hongmei Su, Qian Zhou, Yinghui Wang, Jialong Jie, Chunfan Yang, Xiaojuan Dai, Kunhui Liu, and Hongmei Zhao
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Free Radicals ,Chemistry ,Base pair ,Stereochemistry ,DNA replication ,Hydrogen Bonding ,DNA ,General Chemistry ,010402 general chemistry ,Deoxycytidine ,01 natural sciences ,Biochemistry ,Tautomer ,Catalysis ,0104 chemical sciences ,Nucleobase ,Cytosine ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Deprotonation ,Cations ,Nucleic Acid Conformation ,A-DNA - Abstract
Radical cations of nucleobases are key intermediates causing genome mutation, among which cytosine C•+ is of growing importance because the ensuing cytosine oxidation causes GC → AT transversions in DNA replication. Although the chemistry and biology of steady-state C oxidation products have been characterized, time-resolved study of initial degradation pathways of C•+ is still at the preliminary stage. Herein, we choose i-motif, a unique C-quadruplex structure composed of hemiprotonated base pairs C(H)+:C, to examine C•+ degradation in a DNA surrounding without interference of G bases. Comprehensive time-resolved spectroscopy were performed to track C•+ dynamics in i-motif and in free base dC. The competing pathways of deprotonation (1.4 × 107 s–1), tautomerization (8.8 × 104 s–1), and hydration (5.3 × 103 s–1) are differentiated, and their rate constants are determined for the first time, underlining the strong reactivity of C•+. Distinct pathway is observed in i-motif compared with dC, showing the prom...
- Published
- 2019
44. Isovitexin protects against acute liver injury by targeting PTEN, PI3K and BiP via modification of m6A
- Author
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Yushen Huang, Siyun Chen, Lijun Pang, Zhongwen Feng, Hongmei Su, Wuchang Zhu, and Jinbin Wei
- Subjects
Pharmacology ,Phosphatidylinositol 3-Kinases - Abstract
Isovitexin (IVT) has been shown to have a potential therapeutic effect on acute liver injury (ALI), but its underlying mechanisms especially the targets remain unclear, which was investigated in the present study. Briefly, the targets of IVT were predicted by bioinformatics and then were verified by multiple examinations using molecular docking, cellular thermal shift assay (CETSA), and Lipopolysaccharide/D-Galactosamine (LPS/D-GalN)-induced ALI animal model. The bioinformatic analysis predicted that the target genes of IVT against ALI were enriched into the PI3K/Akt and ERS-related pathways, in which, molecular docking and CETSA examination verified that the binding sites of IVT likely were PTEN, PI3K and BiP. Furthermore, the possible targets were also verified by animal experiments. The results revealed that IVT significantly ameliorated the hepatic injury, as evidenced by the attenuation of histopathological changes and the reduction in serum aminotransferase and total bilirubin activities. In addition, IVT treatment led to the reduction of PTEN, BiP and ERS-related targets expressions, as well as the elevation of PI3K, Akt and mTOR expressions. Notably, IVT significantly decreased total hepatic m6A level and m6A enrichment of PTEN and BiP, suggesting IVT regulated PTEN and BiP by modulating m6A modification. To sum up, the results indicate that IVT significantly ameliorates ALI, which is attributed to its ability to regulate the PI3K/Akt pathway and ERS by targeting PTEN, PI3K and BiP via modification of m6A. Our finding demonstrates that IVT may be a promising natural medicine for the treatment of ALI.
- Published
- 2021
45. The cell-impermeable Ru(II) polypyridyl complex as a potent intracellular photosensitizer under visible light irradiation via ion-pairing with suitable lipophilic counter-anions
- Author
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Zhi-Hui Zhang, Hongmei Su, Jing Chen, Li Mao, Miao Tang, Chun-Hua Huang, Jie Shao, Zhu-Ying Yan, Ze-Qing Jiao, Zhi-Guo Sheng, Ben-Zhan Zhu, Rong Huang, and Tian-Shu Tang
- Subjects
0301 basic medicine ,Tris ,Anions ,Light ,medicine.medical_treatment ,Photodynamic therapy ,Photochemistry ,Biochemistry ,Ruthenium ,HeLa ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Coordination Complexes ,Physiology (medical) ,medicine ,Humans ,Photosensitizer ,Irradiation ,Photosensitizing Agents ,biology ,Singlet oxygen ,Cationic polymerization ,biology.organism_classification ,030104 developmental biology ,Flufenamic acid ,chemistry ,030217 neurology & neurosurgery ,medicine.drug ,HeLa Cells - Abstract
Developing the cell-impermeable Ru(II) polypyridyl cationic complexes as effective photosensitizers (PS) which have high cellular uptake and photo-toxicity, but low dark toxicity, is quite challenging. Here we found that the highly reactive singlet oxygen (1O2) can be generated by the irradiation of a typical Ru(II) polypyridyl complex Ru(II)tris(tetramethylphenanthroline) ([Ru(TMP)3]2+) under visible light irradiation by ESR with TEMPO (2,2,6,6-tetramethyl-4-piperidone-N-oxyl) as 1O2 probe. Effective cellular and nuclear delivery of cationic [Ru(TMP)3]2+ was achieved through our recently developed ion-pairing method, and 2,3,4,5-tetrachlorophenol (2,3,4,5-TeCP) was found to be the most effective among all chlorophenols tested. The accelerated cellular, especially nuclear uptake of [Ru(TMP)3]2+ results in the formation of 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) and DNA strand breaks, caspase 3/7 activation and cell apoptosis in HeLa cells upon light irradiation. More importantly, compared with other traditional photosensitizers, [Ru(TMP)3]2+ showed significant photo-toxicity but low dark toxicity. Similar effects were observed when 2,3,4,5-TeCP was substituted by the currently clinically used anti-inflammatory drug flufenamic acid. This represents the first report that the cell-impermeable Ru(II) polypyridyl complex ion-paired with suitable lipophilic counter-anions functions as potent intracellular photosensitizer under visible light irradiation mainly via a 1O2-mediated mechanism. These findings should provide new perspectives for future investigations on other metal complexes with similar characteristics as promising photosensitizers for potential photodynamic therapy.
- Published
- 2021
46. Correction: Exploring Agrobacterium-mediated genetic transformation methods and its applications in Lilium
- Author
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Xinyue Fan and Hongmei Sun
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Plant culture ,SB1-1110 ,Biology (General) ,QH301-705.5 - Published
- 2024
- Full Text
- View/download PDF
47. Deprotonation of Guanine Radical Cation G
- Author
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Xianwang, Zhang, Jialong, Jie, Di, Song, and Hongmei, Su
- Subjects
Models, Molecular ,Guanine ,Molecular Conformation ,Quantum Theory ,Protons ,Oxidation-Reduction ,DNA Damage - Abstract
Proton transfer is regarded as a fundamental process in chemical reactions of DNA molecules and continues to be an active research theme due to the connection with charge transport and oxidation damage of DNA. For the guanine radical cation (G
- Published
- 2020
48. Amphiphilic trismethylpyridylporphyrin-fullerene (C
- Author
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Mirong, Guan, Tingxiao, Qin, Jiechao, Ge, Mingming, Zhen, Wei, Xu, Daiqin, Chen, Shumu, Li, Chunru, Wang, Hongmei, Su, and Chunying, Shu
- Abstract
Amphiphilic trismethylpyridylporphyrin-C
- Published
- 2020
49. Elucidating heterogeneous photocatalytic superiority of microporous porphyrin organic cage
- Author
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Hailong Wang, Banglin Chen, Heyuan Liu, Chiming Wang, Chao Liu, Xiyou Li, Jianzhuang Jiang, Hongmei Su, and Kunhui Liu
- Subjects
Science ,Supramolecular chemistry ,General Physics and Astronomy ,010402 general chemistry ,Photochemistry ,Quantitative Biology::Other ,01 natural sciences ,Article ,General Biochemistry, Genetics and Molecular Biology ,Catalysis ,chemistry.chemical_compound ,Physics::Atomic and Molecular Clusters ,Photocatalysis ,lcsh:Science ,Multidisciplinary ,Organocatalysis ,010405 organic chemistry ,Singlet oxygen ,General Chemistry ,Microporous material ,Metal-organic frameworks ,Porphyrin ,0104 chemical sciences ,Condensed Matter::Soft Condensed Matter ,chemistry ,lcsh:Q ,Metal-organic framework - Abstract
The investigation on the catalytic properties of porous organic cages is still in an initial stage. Herein, the reaction of cyclohexanediamine with 5,15-di[3’,5’-diformyl(1,1’-biphenyl)]porphyrin affords a porphyrin tubular organic cage, PTC-1(2H). Transient absorption spectroscopy in solution reveals much prolonged triplet lifetime of PTC-1(2H) relative to monomer reference, illustrating the unique photophysical behavior of cagelike photosensitizer. The long triplet lifetime ensures high-efficiency singlet oxygen evolution according to homogeneous photo-bleach experiment, electron spin-resonance spectroscopy, and aerobic photo-oxidation of benzylamine. Furthermore, microporous supramolecular framework of PTC-1(2H) is able to promote the heterogeneous photo-oxidation of various primary amines with conversion efficiency above 99% under visible light irradiation. These results indicate the great application potentials of porous organic cages in heterogeneous phase., The investigation on the catalytic properties of porous organic cages is still in an initial stage. Herein, the heterogeneous photocatalytic superiority of microporous porphyrin organic cage has been clearly elucidated due to unique cage-induced long triplet lifetime and porous structure.
- Published
- 2020
50. One-electron oxidation of TAT-motif triplex DNA and the ensuing Hoogsteen hydrogen-bonding dissociation
- Author
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Chunfan Yang, Hongmei Su, Yinghui Wang, Qian Zhou, Jialong Jie, and Xiaojuan Dai
- Subjects
010304 chemical physics ,Chemistry ,Hydrogen bond ,Stereochemistry ,Adenine ,General Physics and Astronomy ,Free base ,Electrons ,Hydrogen Bonding ,DNA ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Deprotonation ,Radical ion ,Deoxyadenosine ,0103 physical sciences ,Flash photolysis ,Physical and Theoretical Chemistry ,Protein secondary structure ,Oxidation-Reduction ,Thymine - Abstract
One-electron oxidation of adenine (A) leads initially to the formation of adenine radical cation (A•+). Subsequent deprotonation of A•+ can provoke deoxyribonucleic acid (DNA) damage, which further causes senescence, cancer formation, and even cell death. However, compared with considerable reports on A•+ reactions in free deoxyadenosine (dA) and duplex DNA, studies in non-B-form DNA that play critical biological roles are rare at present. It is thus of vital importance to explore non-B-form DNA, among which the triplex is an emerging topic. Herein, we investigate the deprotonation behavior of A•+ in the TAT triplex with continuous A bases by time-resolved laser flash photolysis. The rate constants for the one-oxidation of triplex 8.4 × 108 M−1 s−1 and A•+ deprotonation 1.3 × 107 s−1 are obtained. The kinetic isotope effect of A•+ deprotonation in the TAT triplex is 1.8, which is characteristic of a direct release of the proton into the solvent similar to free base dA. It is thus elucidated that the A•+ proton bound with the third strand is most likely to be released into the solvent because of the weaker Hoogsteen H-bonding interaction and the presence of the highly mobile hydration waters within the third strand. Additionally, it is confirmed through Fourier transform infrared spectroscopy that the deprotonation of A•+ results in the dissociation of the third strand and disruption of the secondary structure of the triplex. These results provide valuable kinetic data and in-depth mechanistic insights for understanding the adenine oxidative DNA damage in the triplex.One-electron oxidation of adenine (A) leads initially to the formation of adenine radical cation (A•+). Subsequent deprotonation of A•+ can provoke deoxyribonucleic acid (DNA) damage, which further causes senescence, cancer formation, and even cell death. However, compared with considerable reports on A•+ reactions in free deoxyadenosine (dA) and duplex DNA, studies in non-B-form DNA that play critical biological roles are rare at present. It is thus of vital importance to explore non-B-form DNA, among which the triplex is an emerging topic. Herein, we investigate the deprotonation behavior of A•+ in the TAT triplex with continuous A bases by time-resolved laser flash photolysis. The rate constants for the one-oxidation of triplex 8.4 × 108 M−1 s−1 and A•+ deprotonation 1.3 × 107 s−1 are obtained. The kinetic isotope effect of A•+ deprotonation in the TAT triplex is 1.8, which is characteristic of a direct release of the proton into the solvent similar to free base dA. It is thus elucidated that the A•+ p...
- Published
- 2020
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