1. Massive sequencing of 70 genes reveals a myriad of missing genes or mechanisms to be uncovered in hereditary spastic paraplegias
- Author
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Paula Coutinho, Eva Brandão, Alexis Brice, Mathilde Mairey, Jorge Sequeiros, José Leal Loureiro, Laure Raymond, P. R. G. Ribeiro, Isabel Alonso, Giovanni Stevanin, S. Sara Morais, Institut du Cerveau et de la Moëlle Epinière = Brain and Spine Institute (ICM), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Pitié-Salpêtrière [AP-HP], Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Centre National de la Recherche Scientifique (CNRS), Departamento de Neurologia, Hospital S. Sebastiao, and Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,Male ,Spastin ,Kinesins ,Disease ,Biology ,medicine.disease_cause ,DNA sequencing ,Article ,03 medical and health sciences ,0302 clinical medicine ,Genetics ,medicine ,Inheritance Mode ,Humans ,Gene ,Genetics (clinical) ,Mutation ,Genetic heterogeneity ,Spastic Paraplegia, Hereditary ,[SCCO.NEUR]Cognitive science/Neuroscience ,Inheritance (genetic algorithm) ,Proteins ,Phenotype ,3. Good health ,Pedigree ,030104 developmental biology ,Genetic Loci ,Female ,030217 neurology & neurosurgery - Abstract
International audience; Hereditary spastic paraplegias (HSP) are neurodegenerative disorders characterized by lower limb spasticity and weakness that can be complicated by other neurological or non-neurological signs. Despite a high genetic heterogeneity (460 causative genes), 40–70% of the families remain without a molecular diagnosis. Analysis of one of the pioneer cohorts of 193 HSP families generated in the early 1990s in Portugal highlighted that SPAST and SPG11 are the most frequent diagnoses. We have now explored 98 unsolved families from this series using custom next generation sequencing panels analyzing up to 70 candidate HSP genes. We identified the likely disease-causing variant in 20 of the 98 families with KIF5A being the most frequently mutated gene. We also found 52 variants of unknown significance (VUS) in 38% of the cases. These new diagnoses resulted in 42% of solved cases in the full Portuguese cohort (81/193). Segregation of the variants was not always compatible with the presumed inheritance, indicating that the analysis of all HSP genes regardless of the inheritance mode can help to explain some cases. Our results show that there is still a large set of unknown genes responsible for HSP and most likely novel mechanisms or inheritance modes leading to the disease to be uncovered, but this will require international collaborative efforts, particularly for the analysis of VUS.
- Published
- 2017
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