108 results on '"Ibáñez, C F"'
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2. Molecular Anatomy of Neurotrophic Factors
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Ibáñez, C. F. and Hefti, Franz, editor
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- 1999
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3. Neurotrophins and their Receptors
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Persson, H., Ernfors, P., Ibañez, C. F., Hallböök, F., Friedman, W. J., Merlio, J.-P., Lindvall, O., Bengzon, J., Lindefors, N., Ebendal, T., Olson, L., Christen, Yves, editor, and Gage, Fred H., editor
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- 1992
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4. Self-association of the transmembrane domain of RET underlies oncogenic activation by MEN2A mutations
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Kjær, S, Kurokawa, K, Perrinjaquet, M, Abrescia, C, and Ibáñez, C F
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- 2006
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5. Recent evolutionary origin within the primate lineage of two pseudogenes with similarity to members of the transforming growth factor-β superfamily
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Eketjäll, S., Jörnvall, H., Lönnerberg, P., Kobayashi, S., and Ibáñez, C. F.
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- 2004
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6. Molecular Anatomy of Neurotrophic Factors
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Ibáñez, C. F., primary
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- 1999
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7. Differential actions of neurotrophins in the locus coeruleus and basal forebrain.
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Friedman, W J, Ibáñez, C F, Hallböök, F, Persson, H, Cain, L D, Dreyfus, C F, Black, I B, Friedman, W J, Ibáñez, C F, Hallböök, F, Persson, H, Cain, L D, Dreyfus, C F, and Black, I B
- Abstract
The neurotrophin gene family, including nerve growth factor (NGF), brain-derived neurotrophic factor (BDNF), neurotrophin-3 (NT-3), and NT-4/NT-5, supports the survival of distinct peripheral neurons, however, actions upon central neurons are relatively undefined. In this study we have compared different neurotrophins in the regulation of neuronal survival and function using dissociated embryonic cell cultures from two brain regions, the basal forebrain (BF) and locus coeruleus (LC). In the BF, NGF increased choline acetyl transferase (ChAT) activity, but did not influence cholinergic cell survival. In contrast to NGF, BDNF, NT-3, and the novel neurotrophin, NT-4, all increased ChAT activity and cholinergic cell survival. We also examined embryonic LC neurons in culture. LC neurons are unresponsive to NGF. In contrast, NT-3 and NT-4 elicited significant increases in survival of noradrenergic LC neurons, the first demonstration of trophic effects in this critical brain region. Identification of factors supporting coeruleal and basal forebrain neuronal survival may provide insight into mechanisms mediating degeneration of these disparate structures in clinical disorders.
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- 1993
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8. Expression of neurotrophin-4 mRNA during oogenesis in Xenopus laevis.
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Ibáñez, C F, Hallböök, F, Godeau, F, Persson, H, Ibáñez, C F, Hallböök, F, Godeau, F, and Persson, H
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Neurotrophin-4 (NT-4), a recently discovered novel member of the family of neurotrophic factors structurally related to nerve growth factor (NGF), is abundantly expressed in the Xenopus laevis ovary. In this study we have localized NT-4 mRNA expressing cells in the Xenopus ovary by in situ hybridization and have used this technique together with Northern blot analyses to quantify NT-4 mRNA expression during oogenesis in Xenopus. In situ hybridization of sections through the Xenopus ovary using an alpha-[35S]-dATP labeled Xenopus NT-4 mRNA specific probe showed an intense labeling over the cytoplasm of oocytes with a diameter of 50-200 microns corresponding to stage I according to Dumont (1972). Labeling was also seen over the cytoplasm of stages II to IV although with a lower intensity than over stage I oocytes. No labeling was seen over more mature oocytes of stages V and VI. NT-4 mRNA could not be detected in the early embryo from the onset of cleavage division to the neurula stage suggesting that the NT-4 gene is not expressed during Xenopus early embryogenesis. The confinement of NT-4 mRNA in the Xenopus ovary to immature oocytes suggests that NT-4 mRNA expression is strictly regulated during oogenesis and that the NT-4 protein could play a role as a maturation factor for immature oocytes.
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- 1992
9. Evolutionary studies of the nerve growth factor family reveal a novel member abundantly expressed in Xenopus ovary.
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Hallböök, F, Ibáñez, C F, Persson, H, Hallböök, F, Ibáñez, C F, and Persson, H
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Evolutionary conservation of members of the NGF family in vertebrates was studied by DNA sequence analysis of PCR fragments for NGF, BDNF, and NT-3 from human, rat, chicken, viper, Xenopus, salmon, and ray. The results showed that the three factors are highly conserved from fishes to mammals. Phylogenetic trees reflecting the evolution and speciation of the members of the NGF family were constructed. In addition, the gene for a fourth member of the family, neurotrophin-4 (NT-4), was isolated from Xenopus and viper. The NT-4 gene encodes a precursor protein of 236 amino acids, which is processed into a 123 amino acid mature NT-4 protein with 50%-60% amino acid identity to NGF, BDNF, and NT-3. The NT-4 protein was shown to interact with the low affinity NGF receptor and elicited neurite outgrowth from explanted dorsal root ganglia with no and lower activity in sympathetic and nodose ganglia, respectively. Northern blot analysis of different tissues from Xenopus showed NT-4 mRNA only in ovary, where it was present at levels over 100-fold higher than those of NGF mRNA in heart.
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- 1991
10. Human nerve growth factor : biological and immunological activities, and clinical possibilities in neurodegenerative disease.
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Ebendal, T, Söderström, S, Hallböök, F, Ernfors, P, Ibáñez, C F, Persson, H, Wetmore, C, Strömberg, I, Olson, L, Ebendal, T, Söderström, S, Hallböök, F, Ernfors, P, Ibáñez, C F, Persson, H, Wetmore, C, Strömberg, I, and Olson, L
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- 1991
11. Biological and immunological properties of recombinant human, rat, and chicken nerve growth factors : a comparative study.
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Ibáñez, C F, Hallböök, F, Söderström, S, Ebendal, T, Persson, H, Ibáñez, C F, Hallböök, F, Söderström, S, Ebendal, T, and Persson, H
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Biological and immunological properties of recombinant human, rat, and chicken nerve growth factors (NGFs) were studied and compared. Recombinant NGF proteins were produced in a transient expression system using COS cells and levels of secreted NGF protein were assessed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis of conditioned media from in vivo [35S]cysteine-labeled cell cultures. Antigenic differences among the three NGFs were studied by immunoblotting and immunoprecipitation of secreted cell products using a rabbit polyclonal antiserum against purified mouse NGF, and by a two-site enzyme immunoassay (EIA) with a monoclonal antibody against mouse NGF. Although all three NGFs were recognized equally well in the immunoblotting, only one-third of the chicken NGF protein could be detected by immunoprecipitation or by the EIA as compared to the rat and human NGFs. Thus, changes in the three-dimensional structure of the NGF molecule are most likely responsible for the antigenic differences between avian and mammalian NGFs. The three NGF proteins were also compared in their ability to displace 125I-mouse NGF from low-affinity NGF receptors on rat pheochromocytoma PC12 cells. Similar displacement curves and values were obtained for each NGF protein, indicating that structural differences among these molecules do not affect low-affinity binding to NGF receptors. Biological activities were studied by the ability of the conditioned media to promote neurite outgrowth from explants of E9 chick sympathetic ganglia and from PC12 cells. Although the rat system showed a slight preference for the homologous molecule, the morphological changes, dose-response curves, and maximal stimulation values obtained with the different NGFs were practically indistinguishable in the chicken bioassay.(ABSTRACT TRUNCATED AT 250 WORDS)
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- 1991
12. Structure-function studies of nerve growth factor : functional importance of highly conserved amino acid residues.
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Ibáñez, C F, Hallböök, F, Ebendal, T, Persson, H, Ibáñez, C F, Hallböök, F, Ebendal, T, and Persson, H
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Selected amino acid residues in chicken nerve growth factor (NGF) were replaced by site-directed mutagenesis. Mutated NGF sequences were transiently expressed in COS cells and the yield of NGF protein in conditioned medium was quantified by Western blotting. Binding of each mutant to NGF receptors on PC12 cells was evaluated in a competition assay. The biological activity was determined by measuring stimulation of neurite outgrowth from chick sympathetic ganglia. The residues homologous to the proposed receptor binding site of insulin (Ser18, Met19, Val21, Asp23) were substituted by Ala. Replacement of Ser18, Met19 and Asp23 did not affect NGF activity. Modification of Val21 notably reduced both receptor binding and biological activity, suggesting that this residue is important to retain a fully active NGF. The highly conserved Tyr51 and Arg99 were converted into Phe and Lys respectively, without changing the biological properties of the molecule. However, binding and biological activity were greatly impaired after the simultaneous replacement of both Arg99 and Arg102 by Gly. The three conserved Trp residues at positions 20, 75 and 98 were substituted by Phe. The Trp mutated proteins retained 15-60% of receptor binding and 40-80% of biological activity, indicating that the Trp residues are not essential for NGF activity. However, replacement of Trp20 significantly reduced the amount of NGF in the medium, suggesting that this residue may be important for protein stability.
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- 1990
13. Recombinant human beta-nerve growth factor (NGF) : biological activity and properties in an enzyme immunoassay.
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Söderström, S, Hallböök, F, Ibáñez, C F, Persson, H, Ebendal, T, Söderström, S, Hallböök, F, Ibáñez, C F, Persson, H, and Ebendal, T
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Nerve growth factor (NGF) supports sympathetic and sensory neurons in the peripheral nervous system and also functions in the development and maintenance of cholinergic neurons in the basal forebrain. NGF distribution can be studied in the brain of the rat and mouse with the use of a sensitive two-site enzyme immunoassay (EIA) for mouse NGF. It would be of interest to measure the NGF protein also in the human brain, especially against the background that the cholinergic neurons are severely deteriorated in senile dementia of the Alzheimer type. The limited immunological cross-reactivity between NGFs from different species has previously hampered attempts to determine levels of the human NGF. We have now examined the biological activity and immunological properties of human recombinant NGF protein in medium conditioned by COS cells transfected with the human NGF gene. The human NGF behaved similar to mouse NGF in a sympathetic ganglion bioassay. The monoclonal antibody 27/21 to mouse NGF was shown to effectively block the activity of both the human recombinant NGF and mouse native NGF. A two-site EIA using monoclonal antibody 27/21 was optimized. Under the conditions used, the EIA detected the human recombinant NGF with the same sensitivity (1 pg/ml) as shown for the mouse NGF. It should now be possible to test this EIA also on homogenized tissue to examine human NGF in brain samples from Alzheimer patients and age-matched controls.
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- 1990
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14. Peripheral expression and biological activities of GDNF, a new neurotrophic factor for avian and mammalian peripheral neurons.
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Trupp, M, primary, Rydén, M, additional, Jörnvall, H, additional, Funakoshi, H, additional, Timmusk, T, additional, Arenas, E, additional, and Ibáñez, C F, additional
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- 1995
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15. Regulatory region in choline acetyltransferase gene directs developmental and tissue-specific expression in transgenic mice.
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Lönnerberg, P, primary, Lendahl, U, additional, Funakoshi, H, additional, Arhlund-Richter, L, additional, Persson, H, additional, and Ibáñez, C F, additional
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- 1995
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16. Synergistic Trophic Actions on Rat Basal Forebrain Neurons Revealed by a Synthetic NGF/BDNF Chimaeric Molecule
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Friedman, W. J., primary, Black, I. B., additional, Persson, H., additional, and Ibáñez, C. F., additional
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- 1995
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17. Mammalian neurotrophin-4: structure, chromosomal localization, tissue distribution, and receptor specificity.
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Ip, N Y, primary, Ibáñez, C F, additional, Nye, S H, additional, McClain, J, additional, Jones, P F, additional, Gies, D R, additional, Belluscio, L, additional, Le Beau, M M, additional, Espinosa, R, additional, and Squinto, S P, additional
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- 1992
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18. Expression of choline acetyltransferase mRNA in spermatogenic cells results in an accumulation of the enzyme in the postacrosomal region of mature spermatozoa.
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Ibáñez, C F, primary, Pelto-Huikko, M, additional, Söder, O, additional, Ritzèn, E M, additional, Hersh, L B, additional, Hökfelt, T, additional, and Persson, H, additional
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- 1991
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19. Recombinant human β-nerve growth factor (NGF): Biological activity and properties in an enzyme immunoassay
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Söderström, S., primary, Hallböök, F., additional, Ibáñez, C. F., additional, Persson, H., additional, and Ebendal, T., additional
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- 1990
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20. Molecular cloning and neurotrophic activities of a protein with structural similarities to nerve growth factor: developmental and topographical expression in the brain.
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Ernfors, P, primary, Ibáñez, C F, additional, Ebendal, T, additional, Olson, L, additional, and Persson, H, additional
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- 1990
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21. Expression of mRNA for the neurotrophin receptor trkC in neuroblastomas with favourable tumour stage and good prognosis.
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Rydén, M, Sehgal, R, Dominici, C, Schilling, FH, Ibáñez, CF, Kogner, P, Rydén, M, Schilling, F H, and Ibáñez, C F
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- 1996
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22. The orphan receptor ALK7 and the Activin receptor ALK4 mediate signaling by Nodal proteins during vertebrate development.
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Reissmann, E, Jörnvall, H, Blokzijl, A, Andersson, O, Chang, C, Minchiotti, G, Persico, M G, Ibáñez, C F, and Brivanlou, A H
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Nodal proteins have crucial roles in mesendoderm formation and left-right patterning during vertebrate development. The molecular mechanisms of signal transduction by Nodal and related ligands, however, are not fully understood. In this paper, we present biochemical and functional evidence that the orphan type I serine/threonine kinase receptor ALK7 acts as a receptor for mouse Nodal and Xenopus Nodal-related 1 (Xnr1). Receptor reconstitution experiments indicate that ALK7 collaborates with ActRIIB to confer responsiveness to Xnr1 and Nodal. Both receptors can independently bind Xnr1. In addition, Cripto, an extracellular protein genetically implicated in Nodal signaling, can independently interact with both Xnr1 and ALK7, and its expression greatly enhances the ability of ALK7 and ActRIIB to respond to Nodal ligands. The Activin receptor ALK4 is also able to mediate Nodal signaling but only in the presence of Cripto, with which it can also interact directly. A constitutively activated form of ALK7 mimics the mesendoderm-inducing activity of Xnr1 in Xenopus embryos, whereas a dominant-negative ALK7 specifically blocks the activities of Nodal and Xnr1 but has little effect on other related ligands. In contrast, a dominant-negative ALK4 blocks all mesoderm-inducing ligands tested, including Nodal, Xnr1, Xnr2, Xnr4, and Activin. In agreement with a role in Nodal signaling, ALK7 mRNA is localized to the ectodermal and organizer regions of Xenopus gastrula embryos and is expressed during early stages of mouse embryonic development. Therefore, our results indicate that both ALK4 and ALK7 can mediate signal transduction by Nodal proteins, although ALK7 appears to be a receptor more specifically dedicated to Nodal signaling.
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- 2001
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23. Ret-dependent and -independent mechanisms of glial cell line-derived neurotrophic factor signaling in neuronal cells.
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Trupp, M, Scott, R, Whittemore, S R, and Ibáñez, C F
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Glial cell line-derived neurotrophic factor (GDNF) has been shown to signal through a multicomponent receptor complex consisting of the Ret receptor tyrosine kinase and a member of the GFRalpha family of glycosylphosphatidylinositol-anchored receptors. In the current model of GDNF signaling, Ret delivers the intracellular signal but cannot bind ligand on its own, while GFRalphas bind ligand but are thought not to signal in the absence of Ret. We have compared signaling pathways activated by GDNF in two neuronal cell lines expressing different complements of GDNF receptors. In a motorneuron-derived cell line expressing Ret and GFRalphas, GDNF stimulated sustained activation of the Ras/ERK and phosphatidylinositol 3-kinase/Akt pathways, cAMP response element-binding protein phosphorylation, and increased c-fos expression. Unexpectedly, GDNF also promoted biochemical and biological responses in a line of conditionally immortalized neuronal precursors that express high levels of GFRalphas but not Ret. GDNF treatment did not activate the Ras/ERK pathway in these cells, but stimulated a GFRalpha1-associated Src-like kinase activity in detergent-insoluble membrane compartments, rapid phosphorylation of cAMP response element-binding protein, up-regulation of c-fos mRNA, and cell survival. Together, these results offer new insights into the dynamics of GDNF signaling in neuronal cells, and indicate the existence of novel signaling mechanisms directly or indirectly mediated by GFRalpha receptors acting in a cell-autonomous manner independently of Ret.
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- 1999
24. Neurotrophin-4 is a target-derived neurotrophic factor for neurons of the trigeminal ganglion.
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Ibáñez, C F, Ernfors, P, Timmusk, T, Ip, N Y, Arenas, E, Yancopoulos, G D, and Persson, H
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The cellular localization of mRNA for neurotrophin-4 (NT-4), a novel neurotrophic factor, in the developing whisker follicles and skin of the embryonic rat is demonstrated by in situ hybridization. Levels of NT-4 mRNA in the whisker pad decrease between embryonic day 13 (E13) and E20, correlating in time with the onset of naturally occurring neuronal death in the innervating trigeminal ganglion. In addition to NT-4, brain-derived neuotrophic factor (BDNF) mRNA is also shown to be expressed in the rat embryonic whisker follicles although in a different cellular localization, which combined with previous data on the expression of NGF and NT-3 mRNAs, shows that all four neurotrophins are expressed during development of this structure. NT-4 protein is shown to elicit neurite outgrowth from explanted embryonic trigeminal ganglia and to promote neuronal survival of dissociated trigeminal ganglion neurons when cultured during the phase of cell death. NT-4 and NT-3 mainly support different neuronal subpopulations, whereas some NT-4-responsive cells appear to respond also to NGF and BDNF. Analysis of mRNAs for members of the Trk family of neurotrophin receptors in neurons rescued by different neurotrophins demonstrates the presence of distinct neuronal subpopulations that respond to specific combinations of these factors. Based on these results we propose that NT-4, together with the other three neurotrophins, orchestrate the innervation of the different structures of the developing whisker pad by the trigeminal ganglion, acting as target-derived neurotrophic factors for different subpopulations of trigeminal ganglion neurons.
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- 1993
25. Differential modulation of neuron survival during development by nerve growth factor binding to the p75 neurotrophin receptor.
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Rydén, M, Hempstead, B, and Ibáñez, C F
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Nerve growth factor (NGF) supports the survival and differentiation of distinct populations of peripheral and central neurons. NGF binds to two classes of cell-surface receptors, the protein tyrosine kinase TrkA and the smaller p75 receptor lacking intrinsic catalytic activity. It has been suggested that both receptors are required for NGF high affinity binding, although TrkA appears to be sufficient for transducing most of the biological effects of NGF. Some evidence suggests that p75 could play a modulatory role on TrkA activation by an as yet unknown mechanism. In this study, we have investigated functional roles of p75 using a purified triple mutant NGF (triNGF) deficient in p75 binding but retaining significant TrkA binding and activation. The mutant was found to be as potent as wild type NGF at promoting survival of serum-deprived TrkA-expressing fibroblasts. On developing chick sensory neurons, survival responses to mutant and native NGF were indistinguishable when assayed at nanomolar concentrations. However, triNGF was 3- to 4-fold less potent than wild type NGF at lower concentrations (i.e. 10(-11) M). Interestingly, in PC12 cells coexpressing TrkA and p75, no high affinity binding sites for triNGF could be detected. The reduced responsiveness to triNGF in sensory neurons was increasingly evident at later developmental stages; late embryonic neurons did not respond at all to concentrations of triNGF that were saturating at earlier developmental stages. Likewise, although no difference could be seen between wild type and mutant NGF on the survival responses of embryonic rat superior cervical ganglion sympathetic neurons, the mutant was much less potent than native NGF on postnatal sympathetic neurons. In sensory neurons, the decrease in responsiveness to triNGF correlated with a developmental reduction in the expression of both p75 and TrkA. Thus, NGF binding to p75 enhances responsiveness to ligand, particularly when this is present at limiting concentrations. During development, p75 modulates responsiveness to NGF so that binding to p75 becomes increasingly important in neurons undergoing a down-regulation of NGF receptors. These results support a ligand-dependent modulatory role for p75 in NGF-mediated neuron survival consistent with p75 functioning as a TrkA regulator and/or signaling receptor.
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- 1997
26. A novel type I receptor serine-threonine kinase predominantly expressed in the adult central nervous system.
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Rydén, M, Imamura, T, Jörnvall, H, Belluardo, N, Neveu, I, Trupp, M, Okadome, T, ten Dijke, P, and Ibáñez, C F
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Receptor serine-threonine kinases (RSTK) mediate inhibitory as well as stimulatory signals for growth and differentiation by binding to members of the transforming growth factor-beta (TGF-beta) superfamily. Over 12 different RSTKs have been isolated so far, displaying wide expression in peripheral tissues and in the nervous system. Here we report the isolation and characterization of a novel type I RSTK termed activin receptor-like kinase-7 (ALK-7) that, unlike other members of this receptor family, is predominantly expressed in the adult central nervous system. The ALK-7 gene encodes a 55-kDa cell-surface protein that exhibits up to 78% amino acid sequence identity in the kinase domain to previously isolated type I receptors for TGF-beta and activin. In the extracellular domain, however, ALK-7 is more divergent, displaying comparable similarities with all members of the ALK subfamily. RNase protection and in situ hybridization studies demonstrated a highly specific mRNA distribution restricted to neurons in several regions of the adult rat central nervous system, including cerebellum, hippocampus, and nuclei of the brainstem. Receptor reconstitution and cross-linking experiments indicated that ALK-7 can form complexes with type II RSTKs for TGF-beta and activin in a ligand-dependent manner, although direct binding of ALK-7 to ligand in these complexes could not be demonstrated. The specific expression pattern of ALK-7, restricted to the postnatal central nervous system, indicates that this receptor may play an important role in the maturation and maintenance of several neuronal subpopulations.
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- 1996
27. A second determinant of binding to the p75 neurotrophin receptor revealed by alanine-scanning mutagenesis of a conserved loop in nerve growth factor.
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Rydén, M and Ibáñez, C F
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In the neurotrophin family, variable regions contain solvent-accessible residues important for receptor binding specificity, whereas many of the conserved residues are buried in hydrophobic cores or in the dimer interface. A stretch of six amino acids (from Asp-72 to Asn-77) in nerve growth factor (NGF) represents an exception to this general rule. These residues are highly conserved and yet form an exposed hydrophilic loop region away from other known determinants of receptor binding. We have investigated the functional importance of this region in NGF using alanine-scanning mutagenesis. Individual mutation of Asp-72, Lys-74, or His-75 to alanine (mutants D72A, K74A, and H75A, respectively) reduced the binding affinity for the p75 neurotrophin receptor by 4-10-fold. Only the D72A mutant showed an additional impairment in binding to the TrkA receptor, which was accompanied by reduced biological activity in PC12 cells, indicating a structural and/or conformational effect of this mutation. Replacement of Ser-73 or Asn-77 with alanine (mutants S73A and N77A, respectively) had no measurable effects on receptor binding. The triple mutant K74A/H75A/N77A exhibited properties that were consistent with the combined effects of the individual mutations, namely impaired binding to p75 without deficits in its interaction with TrkA. In contrast, in the triple mutant D72A/S73A/K74A, the simultaneous replacement of Asp-72 and Lys-74 with alanine had a compensatory effect such that binding to both p75 and TrkA was comparable to that of wild-type NGF, despite the deficits seen in the individual replacements. This molecule, however, was produced at low levels, and its biological activity in sympathetic ganglion explants was reduced, which, together with results from TrkA phosphorylation assays, indicated a reduced stability during prolonged culture conditions. Taken together, these data reveal a second region of interaction with the p75 receptor in NGF with the positively charged residues Lys-74 and His-75 as candidate points of contact. In addition, Asp-72 appears to be a structurally important side chain for stabilizing the conformation of the loop through interactions with neighboring residues.
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- 1997
28. Cell type-specific regulation of choline acetyltransferase gene expression. Role of the neuron-restrictive silencer element and cholinergic-specific enhancer sequences.
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Lönnerberg, P, Schoenherr, C J, Anderson, D J, and Ibáñez, C F
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This study demonstrates the presence of positive and negative regulatory elements within a 2336-base pair-long region of the rat choline acetyltransferase (ChAT) gene promoter that cooperate to direct cell type-specific expression in cholinergic cells. A 21-base pair-long neuron-restrictive silencer element (NRSE) was identified in the proximal part of this region. This element was recognized by the neuron-restrictive silencer factor (NRSF), previously shown to regulate expression of other neuron-specific genes. The ChAT NRSE was inactive in both cholinergic and non-cholinergic neuronal cells, but repressed expression from a heterologous promoter in non-neuronal cells. Specific deletion of this element allowed ChAT gene promoter activity in non-neuronal cells, and overexpression of NRSF repressed ChAT gene promoter activity in cholinergic cells. The distal part of the ChAT gene promoter showed cholinergic-specific enhancing activity, which stimulated promoter activity in cholinergic cells, but was inactive in non-cholinergic neuronal and non-neuronal cells. This enhancer region suppressed the activity of the ChAT NRSE in cholinergic cells, even after NRSF overexpression. Thus, at least two kinds of regulatory elements cooperate to direct ChAT gene expression to cholinergic neurons, namely a neuron-restrictive silencer element and a cholinergic-specific enhancer.
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- 1996
29. Binding of neurotrophin-3 to p75LNGFR, TrkA, and TrkB mediated by a single functional epitope distinct from that recognized by trkC.
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Rydén, M and Ibáñez, C F
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Neurotrophins regulate differentiation and survival of vertebrate neurons through binding to members of the Trk family of receptor tyrosine kinases and to a common low affinity receptor, p75LNGFR. The specificity of neurotrophin action is determined by their selective interaction with the different members of the Trk family; TrkA, TrkB, and TrkC serve as cognate receptors for nerve growth factor, brain-derived neurotrophic factor, and neurotrophin-3 (NT-3), respectively. Unlike nerve growth factor and brain-derived neurotrophic factor, NT-3 can to some extent also bind and activate non-cognate TrkA and B receptors, although the physiological relevance of these interactions is unclear. Previous studies established that neurotrophins use an extended surface for binding to cognate Trk receptors, while binding to p75LNGFR is mediated by a localized cluster of positively charged residues. Here we show that the binding site of NT-3 to its non-preferred receptors TrkA and TrkB is dominated by two positively charged residues, Arg-31 and His-33, previously shown to constitute a main determinant of binding to p75LNGFR. Simultaneous mutation of these two residues into Ala completely abolished NT-3 binding and signaling through TrkA and greatly diminished binding and activation of TrkB. However, NT-3 binding and signaling through its cognate receptor TrkC was unaffected by the mutation. These results show that binding of NT-3 to p75LNGFR, TrkA, and TrkB is mediated by a common determinant, which is distinct from that recognized by TrkC and also different and more localized than the one recognized by TrkA and TrkB in their cognate ligands. Thus, although homologous regions in all neurotrophins are used for binding to Trk receptors, a given Trk may actually contact different residues in different neurotrophins. The mutant NT-3 described here may be of greater advantage than native NT-3 when a trophic activity needs to be specifically targeted to TrkC-expressing neurons and provides a monospecific neurotrophin for future therapeutic development.
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- 1996
30. Limb proprioceptive deficits without neuronal loss in transgenic mice overexpressing neurotrophin-3 in the developing nervous system.
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Ringstedt, T, Kucera, J, Lendahl, U, Ernfors, P, and Ibáñez, C F
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The role of neurotrophin-3 (NT3) during sensory neuron development was investigated in transgenic mice overexpressing NT3 under the control of the promoter and enhancer regions of the nestin gene, an intermediate filament gene widely expressed in the developing nervous system. Most of these mice died during the first postnatal day, and all showed severe limb ataxia suggestive of limb proprioceptive dysfunction. Tracing and histological analyses revealed a complete loss of spindles in limb muscles, absence of peripheral and central Ia projections, and lack of cells immunoreactive to parvalbumin in the dorsal root ganglion (DRG). Despite these deficits, there was no neuronal loss in the DRG of these mice. At birth, transgenic DRG showed increased neuron numbers, and displayed a normal proportion of neurons expressing substance P, calcitonin gene-related peptide and the NT3 receptor trkC. Transgenic dorsal roots exhibited an increased number of axons at birth, indicating that all sensory neurons in transgenic mice projected to the dorsal spinal cord. Despite the absence of central Ia afferents reaching motorneurons, several sensory fibers were seen projecting towards ectopic high levels of NT3 in the midline of transgenic spinal cords. These findings suggest novel roles for NT3 in differentiation of proprioceptive neurons, target invasion and formation of Ia projections which are independent from its effects on neuronal survival.
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- 1997
31. Differential Actions of Neurotrophins in the Locus Coeruleus and Basal Forebrain
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Friedman, W. J., Ibáñez, C. F., Hallböök, F., Persson, H., Cain, L. D., Dreyfus, C. F., and Black, I. B.
- Abstract
The neurotrophin gene family, including nerve growth factor (NGF), brain-derived neurotrophic factor (BDNF), neurotrophin-3 (NT-3), and NT-4/NT-5, supports the survival of distinct peripheral neurons, however, actions upon central neurons are relatively undefined. In this study we have compared different neurotrophins in the regulation of neuronal survival and function using dissociated embryonic cell cultures from two brain regions, the basal forebrain (BF) and locus coeruleus (LC). In the BF, NGF increased choline acetyl transferase (ChAT) activity, but did not influence cholinergic cell survival. In contrast to NGF, BDNF, NT-3, and the novel neurotrophin, NT-4, all increased ChAT activity and cholinergic cell survival. We also examined embryonic LC neurons in culture. LC neurons are unresponsive to NGF. In contrast, NT-3 and NT-4 elicited significant increases in survival of noradrenergic LC neurons, the first demonstration of trophic effects in this critical brain region. Identification of factors supporting coerulcal and basal forebrain neuronal survival may provide insight into mechanisms mediating degeneration of these disparate structures in clinical disorders. Copyright 1993, 1999 Academic Press
- Published
- 1993
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32. Self-association of the transmembrane domain of RET underlies oncogenic activation by MEN2A mutations.
- Author
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Kjaer S, Kurokawa K, Perrinjaquet M, Abrescia C, and Ibáñez CF
- Subjects
- Alanine genetics, Alanine metabolism, Amino Acid Sequence, Animals, Cysteine genetics, Cysteine metabolism, Dimerization, Disulfides metabolism, Drosophila Proteins chemistry, Drosophila Proteins genetics, Drosophila melanogaster, Gene Expression drug effects, Glial Cell Line-Derived Neurotrophic Factor pharmacology, Humans, Molecular Sequence Data, Mutation genetics, Protein Binding, Proto-Oncogene Proteins c-ret chemistry, Proto-Oncogene Proteins c-ret genetics, Sequence Alignment, Sequence Homology, Amino Acid, Thyroid Neoplasms genetics, Cell Membrane metabolism, Drosophila Proteins metabolism, Multiple Endocrine Neoplasia Type 2a genetics, Multiple Endocrine Neoplasia Type 2a metabolism, Proto-Oncogene Proteins c-ret metabolism
- Abstract
In patients with medullary thyroid carcinoma (MTC) and type 2A multiple endocrine neoplasia (MEN2A), mutations of cysteine residues in the extracellular juxtamembrane region of the RET receptor tyrosine kinase cause the formation of covalent receptor dimers linked by intermolecular disulfide bonds between unpaired cysteines, followed by oncogenic activation of the RET kinase. The close proximity to the plasma membrane of the affected cysteine residues prompted us to investigate the possible role of the transmembrane (TM) domain of RET (RET-TM) in receptor-receptor interactions underlying dimer formation. Strong self-association of the RET-TM was observed in a biological membrane. Mutagenesis studies indicated the involvement of the evolutionary conserved residues Ser-649 and Ser-653 in RET-TM oligomerization. Unexpectedly, RET-TM interactions were also abrogated in the A639G/A641R double mutant, first identified in a sporadic case of MTC. In agreement with this, no transforming activity could be detected in full-length RET carrying the A639G and A641R mutations, which remained fully responsive to glial cell-line-derived neurotrophic factor (GDNF) stimulation. When introduced in the context of C634R - a cysteine replacement that is prevalent in MEN2A cases - the A639G/A641R mutations significantly reduced dimer formation and transforming activity in this otherwise highly oncogenic RET variant. These data suggest that a strong propensity to self-association in the RET-TM underlies - and may be required for - dimer formation and oncogenic activation of juxtamembrane cysteine mutants of RET, and explains the close proximity to the plasma membrane of cysteine residues implicated in MEN2A and MTC syndromes.
- Published
- 2006
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33. Molecular modeling of the extracellular domain of the RET receptor tyrosine kinase reveals multiple cadherin-like domains and a calcium-binding site.
- Author
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Anders J, Kjar S, and Ibáñez CF
- Subjects
- Amino Acid Sequence, Binding Sites, Cadherins chemistry, Glial Cell Line-Derived Neurotrophic Factor Receptors, Humans, Models, Molecular, Molecular Sequence Data, Mutagenesis, Site-Directed, Phylogeny, Protein Conformation, Proto-Oncogene Proteins chemistry, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins c-ret, Receptor Protein-Tyrosine Kinases chemistry, Receptor Protein-Tyrosine Kinases genetics, Sequence Homology, Amino Acid, Cadherins metabolism, Calcium metabolism, Drosophila Proteins, Proto-Oncogene Proteins metabolism, Receptor Protein-Tyrosine Kinases metabolism
- Abstract
Using bioinformatic tools, mutagenesis, and binding studies, we have investigated the structural organization of the extracellular region of the RET receptor tyrosine kinase, a functional receptor for glial cell line-derived neurotrophic factor (GDNF). Multiple sequence alignments of seven vertebrate sequences and one invertebrate RET sequence delineated four distinct N-terminal domains, each of about 110 residues, containing many of the consensus motifs of the cadherin fold. Based on these alignments and the crystal structures of epithelial and neural cadherins, we have generated molecular models of each of the four cadherin-like domains in the extracellular region of human RET. The modeled structures represent realistic models from both energetic and geometrical points of view and are consistent with previous observations gathered from biochemical analyses of the effects of Hirschsprung's disease mutations affecting the folding and stability of the RET molecule, as well as our own site-directed mutagenesis studies of RET cadherin-like domain 1. We have also investigated the role of Ca(2+) in ligand binding by RET and found that Ca(2+) ions are required for RET binding to GDNF but not for GDNF binding to the GFRalpha1 co-receptor. In agreement with these results, RET, but not GFRalpha1, was found to bind Ca(2+) directly. Our results indicate that the overall architecture of the extracellular region of RET is more closely related to cadherins than previously thought. The models of the cadherin-like domains of human RET represent valuable tools with which to guide future site-directed mutagenesis studies aimed at identifying residues involved in ligand binding and receptor activation.
- Published
- 2001
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34. Neuromuscular junction disassembly and muscle fatigue in mice lacking neurotrophin-4.
- Author
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Belluardo N, Westerblad H, Mudó G, Casabona A, Bruton J, Caniglia G, Pastoris O, Grassi F, and Ibáñez CF
- Subjects
- Acetylcholinesterase metabolism, Age Factors, Animals, Electromyography, Mice, Mice, Knockout, Motor Neurons physiology, Muscle Contraction physiology, Muscle Fibers, Slow-Twitch enzymology, Muscle, Skeletal cytology, Muscle, Skeletal innervation, Receptors, Cholinergic metabolism, Muscle Fatigue physiology, Muscle, Skeletal physiology, Nerve Growth Factors genetics, Neuromuscular Junction physiology
- Abstract
Neurotrophin-4 (NT-4) is produced by slow muscle fibers in an activity-dependent manner and promotes growth and remodeling of adult motorneuron innervation. However, both muscle fibers and motor neurons express NT-4 receptors, suggesting bidirectional NT-4 signaling at the neuromuscular junction. Mice lacking NT-4 displayed enlarged and fragmented neuromuscular junctions with disassembled postsynaptic acetylcholine receptor (AChR) clusters, reduced AChR binding, and acetylcholinesterase activity. Electromyographic responses, posttetanic potentiation, and action potential amplitude were also significantly reduced in muscle fibers from NT-4 knock-out mice. Slow-twitch soleus muscles from these mice fatigued twice as rapidly as those from wild-type mice during repeated tetanic stimulation. Thus, muscle-derived NT-4 is required for maintenance of postsynaptic AChR regions, normal muscular electrophysiological responses, and resistance to muscle fatigue. This neurotrophin may therefore be a key component of an activity-dependent feedback mechanism regulating maintenance of neuromuscular connections and muscular performance., (Copyright 2001 Academic Press.)
- Published
- 2001
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35. The orphan receptor serine/threonine kinase ALK7 signals arrest of proliferation and morphological differentiation in a neuronal cell line.
- Author
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Jörnvall H, Blokzijl A, ten Dijke P, and Ibáñez CF
- Subjects
- Actins metabolism, Activin Receptors, Animals, Cell Differentiation, Cell Division, DNA biosynthesis, DNA-Binding Proteins metabolism, Doxycycline pharmacology, MAP Kinase Signaling System, Mutation, Neurons metabolism, PC12 Cells, Protein Serine-Threonine Kinases biosynthesis, Protein Serine-Threonine Kinases genetics, Protein Serine-Threonine Kinases metabolism, RNA, Messenger biosynthesis, Rats, Receptor, Transforming Growth Factor-beta Type I, Receptors, Transforming Growth Factor beta genetics, Receptors, Transforming Growth Factor beta metabolism, Smad2 Protein, Smad3 Protein, Trans-Activators metabolism, Transcriptional Activation, Transfection, Transforming Growth Factor beta genetics, Activin Receptors, Type I, Neurons cytology, Protein Serine-Threonine Kinases physiology, Signal Transduction
- Abstract
The signaling capabilities and biological functions of activin receptor-like kinase 7 (ALK7), a type I receptor serine/threonine kinase predominantly expressed in the nervous system, are unknown. We have constructed a cell line derived from the rat pheochromocytoma PC12 in which expression of a constitutively active mutant of ALK7 (T194D) is under the control of a tetracycline-inducible promoter. For comparison, another cell line was engineered with tetracycline-regulated expression of a constitutively active variant of the transforming growth factor-beta type I receptor ALK5. Expression of activated ALK7 in PC12 cells resulted in activation of Smad2 and Smad3, but not Smad1, as well as the mitogen-activated protein kinases extracellular signal-regulated kinase and c-Jun N-terminal kinase. Reporter assays demonstrated that ALK7 activation stimulates transcription from the Smad-binding element of the Jun-B gene, the plasminogen activator inhibitor-1 gene, and AP-1 elements. In addition, ALK7 activation induced expression of endogenous gene products, including Smad7, c-fos mRNA, and plasminogen activator inhibitor-1. Thymidine incorporation assays revealed an anti-proliferative effect of ALK7 activation in PC12 cells, which correlated with increased transcription from the promoters of cycline-dependent kinase inhibitors p15(INK4B) and p21. Unexpectedly, ALK7 signaling produced a remarkable change in cell morphology characterized by cell flattening and elaboration of blunt, short cell processes. Interestingly, no such changes were observed upon induction of activated ALK5. The alterations in cell morphology upon ALK7 activation were more pronounced in cultures grown in full serum, were accompanied by rearrangements of actin filaments, and were maintained for several days after withdrawal of treatment. PC12 cultures that had been "primed" in this way showed an accelerated and augmented differentiation response to nerve growth factor. These results indicate that ALK7 may participate in the control of proliferation of neuronal precursors and morphological differentiation of postmitotic neurons.
- Published
- 2001
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36. Released GFRalpha1 potentiates downstream signaling, neuronal survival, and differentiation via a novel mechanism of recruitment of c-Ret to lipid rafts.
- Author
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Paratcha G, Ledda F, Baars L, Coulpier M, Besset V, Anders J, Scott R, and Ibáñez CF
- Subjects
- Animals, Axons drug effects, Cell Differentiation drug effects, Cell Differentiation physiology, Cell Line, Cell Survival drug effects, Culture Media, Conditioned metabolism, Culture Media, Conditioned pharmacology, Enzyme Inhibitors pharmacology, Extracellular Matrix metabolism, Fibroblasts cytology, Fibroblasts drug effects, Fibroblasts metabolism, Glial Cell Line-Derived Neurotrophic Factor, Glial Cell Line-Derived Neurotrophic Factor Receptors, Glycosylphosphatidylinositols metabolism, Growth Cones drug effects, Mutagenesis, Site-Directed, Nerve Crush, Nerve Tissue Proteins pharmacology, Neurons cytology, Protein Structure, Tertiary genetics, Proto-Oncogene Proteins antagonists & inhibitors, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins pharmacology, Proto-Oncogene Proteins c-ret, Rats, Receptor Protein-Tyrosine Kinases antagonists & inhibitors, Receptor Protein-Tyrosine Kinases genetics, Receptor Protein-Tyrosine Kinases pharmacology, Schwann Cells cytology, Schwann Cells metabolism, Sciatic Nerve cytology, Sciatic Nerve drug effects, Sciatic Nerve metabolism, Signal Transduction drug effects, Stem Cells cytology, Stem Cells metabolism, Drosophila Proteins, Membrane Microdomains metabolism, Nerve Growth Factors, Neurons metabolism, Proto-Oncogene Proteins metabolism, Receptor Protein-Tyrosine Kinases metabolism, Signal Transduction physiology
- Abstract
Although both c-Ret and GFRalpha1 are required for responsiveness to GDNF, GFRalpha1 is widely expressed in the absence of c-Ret, suggesting alternative roles for "ectopic" sites of GFRalpha1 expression. We show that GFRalpha1 is released by neuronal cells, Schwann cells, and injured sciatic nerve. c-Ret stimulation in trans by soluble or immobilized GFRalpha1 potentiates downstream signaling, neurite outgrowth, and neuronal survival, and elicits dramatic localized expansions of axons and growth cones. Soluble GFRalpha1 mediates robust recruitment of c-Ret to lipid rafts via a novel mechanism requiring the c-Ret tyrosine kinase. Activated c-Ret associates with different adaptor proteins inside and outside lipid rafts. These results provide an explanation for the tissue distribution of GFRalpha1, supporting the physiological importance of c-Ret activation in trans as a novel mechanism to potentiate and diversify the biological responses to GDNF.
- Published
- 2001
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37. Mammalian GFRalpha -4, a divergent member of the GFRalpha family of coreceptors for glial cell line-derived neurotrophic factor family ligands, is a receptor for the neurotrophic factor persephin.
- Author
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Masure S, Cik M, Hoefnagel E, Nosrat CA, Van der Linden I, Scott R, Van Gompel P, Lesage AS, Verhasselt P, Ibáñez CF, and Gordon RD
- Subjects
- Alternative Splicing, Amino Acid Sequence, Animals, Blotting, Northern, Blotting, Western, Brain metabolism, CHO Cells, Chickens, Chromosome Mapping, Cloning, Molecular, Cricetinae, Cysteine chemistry, DNA, Complementary metabolism, Embryo, Mammalian metabolism, Embryo, Nonmammalian, Glial Cell Line-Derived Neurotrophic Factor, Glial Cell Line-Derived Neurotrophic Factor Receptors, In Situ Hybridization, Kinetics, Membrane Glycoproteins chemistry, Mice, Molecular Sequence Data, Protein Binding, Protein Structure, Tertiary, Proto-Oncogene Proteins metabolism, Proto-Oncogene Proteins c-ret, RNA, Messenger metabolism, Rats, Receptor Protein-Tyrosine Kinases metabolism, Receptors, Cell Surface chemistry, Recombinant Proteins metabolism, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Signal Transduction, Tissue Distribution, Transfection, Avian Proteins, Drosophila Proteins, Membrane Glycoproteins metabolism, Nerve Growth Factors metabolism, Nerve Tissue Proteins chemistry, Nerve Tissue Proteins metabolism, Receptors, Cell Surface metabolism, Receptors, Nerve Growth Factor
- Abstract
Four members of the glial cell line-derived neurotrophic factor family have been identified (GDNF, neurturin, persephin, and enovin/artemin). They bind to a specific membrane-anchored GDNF family receptor as follows: GFRalpha-1 for GDNF, GFRalpha-2 for neurturin, GFRalpha-3 for enovin/artemin, and (chicken) GFRalpha-4 for persephin. Subsequent signaling occurs through activation of a common transmembrane tyrosine kinase, cRET. GFRalpha-4, the coreceptor for persephin, was previously identified in chicken only. We describe the cloning and characterization of a mammalian persephin receptor GFRalpha-4. The novel GFRalpha receptor is substantially different in sequence from all known GFRalphas, including chicken GFRalpha-4, and lacks the first cysteine-rich domain present in all previously characterized GFRalphas. At least two different GFRalpha-4 splice variants exist in rat tissues, differing at their respective COOH termini. GFRalpha-4 mRNA is expressed at low levels in different brain areas in the adult as well as in some peripheral tissues including testis and heart. Recombinant rat GFRalpha-4 variants were expressed in mammalian cells and shown to be at least partially secreted from the cells. Persephin binds specifically and with high affinity (K(D) = 6 nm) to the rat GFRalpha-4 receptor, but no cRET activation could be demonstrated. Although the newly characterized mammalian GFRalpha-4 receptor is structurally divergent from previously characterized GFRalpha family members, we suggest that it is a mammalian orthologue of the chicken persephin receptor. This discovery will allow a more detailed investigation of the biological targets of persephin action and its potential involvement in diseases of the nervous system.
- Published
- 2000
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38. Signaling complexes and protein-protein interactions involved in the activation of the Ras and phosphatidylinositol 3-kinase pathways by the c-Ret receptor tyrosine kinase.
- Author
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Besset V, Scott RP, and Ibáñez CF
- Subjects
- 3T3 Cells, Animals, Binding Sites, Blotting, Western, Cell Line, Cell Survival drug effects, Chromones pharmacology, Cytoplasm metabolism, Dose-Response Relationship, Drug, Enzyme Activation, Enzyme Inhibitors pharmacology, Fibroblasts metabolism, GRB2 Adaptor Protein, Glial Cell Line-Derived Neurotrophic Factor, Glial Cell Line-Derived Neurotrophic Factor Receptors, Glutathione Transferase metabolism, Intracellular Signaling Peptides and Proteins, Ligands, Mice, Mitogen-Activated Protein Kinases metabolism, Models, Biological, Morpholines pharmacology, Mutagenesis, Site-Directed, Mutation, Nerve Tissue Proteins metabolism, Neurons metabolism, Phosphorylation, Precipitin Tests, Protein Binding, Protein Tyrosine Phosphatase, Non-Receptor Type 11, Protein Tyrosine Phosphatase, Non-Receptor Type 6, Protein Tyrosine Phosphatases metabolism, Proteins metabolism, Proto-Oncogene Proteins c-ret, Recombinant Fusion Proteins metabolism, Shc Signaling Adaptor Proteins, Src Homology 2 Domain-Containing, Transforming Protein 1, Time Factors, Tyrosine chemistry, Adaptor Proteins, Signal Transducing, Adaptor Proteins, Vesicular Transport, Drosophila Proteins, Nerve Growth Factors, Phosphatidylinositol 3-Kinases metabolism, Proto-Oncogene Proteins metabolism, Receptor Protein-Tyrosine Kinases metabolism, Signal Transduction, ras Proteins metabolism
- Abstract
Proximal signaling events and protein-protein interactions initiated after activation of the c-Ret receptor tyrosine kinase by its ligand, glial cell line-derived neurotrophic factor (GDNF), were investigated in cells carrying native and mutated forms of this receptor. Mutation of Tyr-1062 (Y1062F) in the cytoplasmic tail of c-Ret abolished receptor binding and phosphorylation of the adaptor Shc and eliminated activation of Ras by GDNF. Phosphorylation of Erk kinases was also greatly attenuated but not eliminated by this mutation. This residual wave of Erk phosphorylation was independent of the kinase activity of c-Ret. Mutation of Tyr-1096 (Y1096F), a binding site for the adaptor Grb2, had no effect on Erk activation by GDNF. Activation of phosphatidylinositol-3 kinase (PI3K) and its downstream effector Akt was also reduced in the Y1062F mutant but not completely abolished unless Tyr-1096 was also mutated. Ligand stimulation of neuronal cells induced the assembly of a large protein complex containing c-Ret, Grb2, and tyrosine-phosphorylated forms of Shc, p85(PI3K), the adaptor Gab2, and the protein-tyrosine phosphatase SHP-2. In agreement with Ras-independent activation of PI3K by GDNF in neuronal cells, survival of sympathetic neurons induced by GDNF was dependent on PI3K but was not affected by microinjection of blocking anti-Ras antibodies, which did compromise neuronal survival by nerve growth factor, suggesting that Ras is not required for GDNF-induced survival of sympathetic neurons. These results indicate that upon ligand stimulation, at least two distinct protein complexes assemble on phosphorylated Tyr-1062 of c-Ret via Shc, one leading to activation of the Ras/Erk pathway through recruitment of Grb2/Sos and another to the PI3K/Akt pathway through recruitment of Grb2/Gab2 followed by p85(PI3K) and SHP-2. This latter complex can also assemble directly onto phosphorylated Tyr-1096, offering an alternative route to PI3K activation by GDNF.
- Published
- 2000
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39. Neurotrophic factors: versatile signals for cell-cell communication in the nervous system.
- Author
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Ibáñez CF
- Subjects
- Animals, Mice, Cell Communication physiology, Nerve Growth Factors physiology, Nervous System embryology, Signal Transduction physiology
- Published
- 2000
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40. Distinct structural elements in GDNF mediate binding to GFRalpha1 and activation of the GFRalpha1-c-Ret receptor complex.
- Author
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Eketjäll S, Fainzilber M, Murray-Rust J, and Ibáñez CF
- Subjects
- Animals, Binding Sites, Cell Line, Cross-Linking Reagents, Dimerization, Glial Cell Line-Derived Neurotrophic Factor, Glial Cell Line-Derived Neurotrophic Factor Receptors, Mice, Models, Molecular, Mutagenesis, Site-Directed, Nerve Tissue Proteins genetics, Phosphorylation, Phosphotyrosine analysis, Protein Binding genetics, Protein Conformation, Protein Structure, Secondary, Proto-Oncogene Proteins c-ret, Structure-Activity Relationship, Drosophila Proteins, Nerve Growth Factors, Nerve Tissue Proteins chemistry, Proto-Oncogene Proteins metabolism, Receptor Protein-Tyrosine Kinases metabolism
- Abstract
Ligand-induced receptor oligomerization is a widely accepted mechanism for activation of cell-surface receptors. We investigated ligand-receptor interactions in the glial cell-line derived neurotrophic factor (GDNF) receptor complex, formed by the c-Ret receptor tyrosine kinase and the glycosylphosphatidylinositol (GPI)-anchored subunit GDNF family receptor alpha-1 (GFRalpha1). As only GFRalpha1 can bind GDNF directly, receptor complex formation is thought to be initiated by GDNF binding to this receptor. Here we identify an interface in GDNF formed by exposed acidic and hydrophobic residues that is critical for binding to GFRalpha1. Unexpectedly, several GDNF mutants deficient in GFRalpha1 binding retained the ability to bind and activate c-Ret at normal levels. Although impaired in binding GFRalpha1 efficiently, these mutants still required GFRalpha1 for c-Ret activation. These findings support a role for c-Ret in ligand binding and indicate that GDNF does not initiate receptor complex formation, but rather interacts with a pre-assembled GFRalpha1- c-Ret complex.
- Published
- 1999
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41. Novel, testis-specific mRNA transcripts encoding N-terminally truncated choline acetyltransferase.
- Author
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Lönnerberg P and Ibáñez CF
- Subjects
- 5' Untranslated Regions, Animals, Base Sequence, COS Cells, Choline O-Acetyltransferase biosynthesis, Choline O-Acetyltransferase metabolism, Cloning, Molecular, DNA, Complementary, Male, Molecular Sequence Data, Neurons enzymology, Protein Biosynthesis, RNA, Messenger, Rats, Rats, Sprague-Dawley, Ribonucleases, Choline O-Acetyltransferase genetics, Testis enzymology
- Abstract
Previous studies reported the presence of choline acetyltransferase (ChAT) mRNA and protein in the mammalian testis. We have now found that none of the ChAT mRNAs produced in the testis is capable of encoding a full-length ChAT protein. Two ChAT cDNAs were isolated from an adult rat testis cDNA library encoding N-terminally truncated ChAT proteins of 450 and 414 amino acids (aa), respectively, the former containing a novel N-terminal extension of 69 residues. Rapid Amplification of cDNA Ends (RACE) analysis revealed a complex pattern of 5' untranslated mRNA termini generated from the ChAT gene locus in the testis, all representing truncated versions of the ChAT enzyme. Two of these proteins were produced in transfected fibroblasts and found to lack ChAT activity. Neither did they show binding to the ChAT substrates, acetyl CoA and choline, in a competition assay. These results indicate that mammalian testis lacks a bona fide ChAT enzyme but expresses truncated ChAT proteins with a possible unique function to the testis.
- Published
- 1999
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42. Role of brain-derived neurotrophic factor in target invasion in the gustatory system.
- Author
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Ringstedt T, Ibáñez CF, and Nosrat CA
- Subjects
- Animals, Brain physiology, Brain-Derived Neurotrophic Factor deficiency, Brain-Derived Neurotrophic Factor genetics, Embryonic and Fetal Development, Gene Expression Regulation, Geniculate Ganglion physiology, Intermediate Filament Proteins genetics, Mice, Mice, Knockout, Mice, Transgenic, Microscopy, Electron, Scanning, Nerve Fibers physiology, Nestin, Neurons physiology, Organ Specificity, Reference Values, Regulatory Sequences, Nucleic Acid, Taste Buds abnormalities, Taste Buds pathology, Tongue embryology, Tongue innervation, Tongue ultrastructure, Brain-Derived Neurotrophic Factor physiology, Intermediate Filament Proteins physiology, Nerve Tissue Proteins, Taste Buds physiology, Tongue physiology
- Abstract
Brain-derived neurotrophic factor (BDNF) is a survival factor for different classes of neurons, including gustatory neurons. We have studied innervation and development of the gustatory system in transgenic mice overexpressing BDNF under the control of regulatory sequences from the nestin gene, an intermediate filament gene expressed in precursor cells of the developing nervous system and muscle. In transgenic mice, the number and size of gustatory papillae were decreased, circumvallate papillae had a deranged morphology, and there was also a severe loss of lingual taste buds. Paradoxically, similar deficits have been found in BDNF knock-out mice, which lack gustatory neurons. However, the number of neurons in gustatory ganglia was increased in BDNF-overproducing mice. Although gustatory fibers reached the tongue in normal numbers, the amount and density of nerve fibers in gustatory papillae were reduced in transgenic mice compared with wild-type littermates. Gustatory fibers appeared stalled at the base of the tongue, a site of ectopic BDNF expression, where they formed abnormal branches and sprouts. Interestingly, palatal taste buds, which are innervated by gustatory neurons whose afferents do not traverse sites of ectopic BDNF expression, appeared unaffected. We suggest that lingual gustatory deficits in BDNF overexpressing mice are a consequence of the failure of their BDNF-dependent afferents to reach their targets because of the effects of ectopically expressed BDNF on fiber growth. Our findings suggest that mammalian taste buds and gustatory papillae require proper BDNF-dependent gustatory innervation for development and that the correct spatial expression of BDNF in the tongue epithelium is crucial for appropriate target invasion and innervation.
- Published
- 1999
43. Researchers face 'Catch-22' grants trap.
- Author
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Ibáñez CF
- Subjects
- Animals, Competitive Behavior, Mice, Mice, Transgenic, National Institutes of Health (U.S.), Peer Review, Research, Research economics, Research trends, United States, Financing, Organized, Research Support as Topic economics, Research Support as Topic trends
- Published
- 1999
- Full Text
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44. Emerging themes in structural biology of neurotrophic factors.
- Author
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Ibáñez CF
- Subjects
- Animals, Binding Sites, Biological Transport physiology, Humans, Molecular Structure, Nerve Growth Factors therapeutic use, Nerve Tissue physiology, Neurodegenerative Diseases drug therapy, Structure-Activity Relationship, Synaptic Transmission physiology, Nerve Growth Factors chemistry, Nerve Growth Factors physiology
- Abstract
Neurotrophic factors control the survival, differentiation and maintenance of neurons in the peripheral and central nervous systems. Their discovery and characterization have been instrumental to our understanding of a wide range of phenomena in the development, plasticity and repair of the nervous system. Their potential importance in the development of therapeutic agents against neurodegenerative disorders and nerve injury has led to a flurry of activity towards understanding their structure, function and signaling mechanisms. This knowledge has increased dramatically in recent years, in particular due to the elucidation of three-dimensional structures, the discovery of families of structurally related neurotrophic factors and the characterization of receptors and downstream signaling components. Common themes are emerging from these recent studies that allow us to make new insights and predictions as to the function and possible clinical utility of these molecules.
- Published
- 1998
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45. BDNF regulates reelin expression and Cajal-Retzius cell development in the cerebral cortex.
- Author
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Ringstedt T, Linnarsson S, Wagner J, Lendahl U, Kokaia Z, Arenas E, Ernfors P, and Ibáñez CF
- Subjects
- Animals, Cells, Cultured, Cerebral Cortex cytology, Down-Regulation, Intermediate Filament Proteins metabolism, Mice, Mice, Transgenic, Nestin, Rats, Reelin Protein, Brain-Derived Neurotrophic Factor physiology, Cerebral Cortex metabolism, Extracellular Matrix Proteins biosynthesis, Nerve Tissue Proteins biosynthesis, Neurons metabolism
- Abstract
Cajal-Retzius (CR) cells of the cerebral cortex express receptors for the neurotrophin brain-derived neurotrophic factor (BDNF) and downregulate expression of the extracellular matrix protein Reelin during early postnatal development, coincident with the onset of cortical BDNF expression. During this period, mice lacking BDNF have elevated levels of Reelin in CR cells. Acute BDNF stimulation of cortical neuron cultures and overexpression of BDNF in the developing brain of transgenic mice prior to the onset of endogenous production causes a profound, dose-dependent reduction of Reelin expression in CR cells. In addition, overexpression of BDNF produces gaps and heterotopias in the marginal zone and disorganization and aggregation of cortical CR cells and induces several other malformations, including aberrant cortical lamination, similar to the phenotype of reeler mutant mice, which lack Reelin. These results demonstrate a role for BDNF on cortical CR cells and identify Reelin as a direct effector of this neurotrophin during brain development.
- Published
- 1998
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46. Early evolutionary origin of the neurotrophin receptor family.
- Author
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van Kesteren RE, Fainzilber M, Hauser G, van Minnen J, Vreugdenhil E, Smit AB, Ibáñez CF, Geraerts WP, and Bulloch AG
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, COS Cells, Cloning, Molecular, Conserved Sequence, Drosophila genetics, Gene Library, Humans, Invertebrates, Lymnaea genetics, Lymnaea growth & development, Molecular Sequence Data, Nerve Growth Factors metabolism, Neurotrophin 3, Protein Conformation, RNA, Messenger biosynthesis, Receptor Protein-Tyrosine Kinases biosynthesis, Receptors, Nerve Growth Factor biosynthesis, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Recombinant Proteins metabolism, Sequence Alignment, Sequence Homology, Amino Acid, Signal Transduction, Transfection, Vertebrates, Evolution, Molecular, Gene Expression Regulation, Developmental, Lymnaea physiology, Phylogeny, Receptor Protein-Tyrosine Kinases chemistry, Receptor Protein-Tyrosine Kinases genetics, Receptors, Nerve Growth Factor chemistry, Receptors, Nerve Growth Factor genetics
- Abstract
Neurotrophins and their Trk receptors play a crucial role in the development and maintenance of the vertebrate nervous system, but to date no component of this signalling system has been found in invertebrates. We describe a molluscan Trk receptor, designated Ltrk, from the snail Lymnaea stagnalis. The full-length sequence of Ltrk reveals most of the characteristics typical of Trk receptors, including highly conserved transmembrane and intracellular tyrosine kinase domains, and a typical extracellular domain of leucine-rich motifs flanked by cysteine clusters. In addition, Ltrk has a unique N-terminal extension and lacks immunoglobulin-like domains. Ltrk is expressed during development in a stage-specific manner, and also in the adult, where its expression is confined to the central nervous system and its associated endocrine tissues. Ltrk has the highest sequence identity with the TrkC mammalian receptor and, when exogenously expressed in fibroblasts or COS cells, binds human NT-3, but not NGF or BDNF, with an affinity of 2.5 nM. These findings support an early evolutionary origin of the Trk family as neuronal receptor tyrosine kinases and suggest that Trk signalling mechanisms may be highly conserved between vertebrates and invertebrates.
- Published
- 1998
- Full Text
- View/download PDF
47. Multiple GPI-anchored receptors control GDNF-dependent and independent activation of the c-Ret receptor tyrosine kinase.
- Author
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Trupp M, Raynoschek C, Belluardo N, and Ibáñez CF
- Subjects
- Amino Acid Sequence, Animals, Animals, Newborn, Brain metabolism, COS Cells, Cloning, Molecular, Enzyme Activation, Fetus, Gene Expression Regulation, Developmental genetics, Glial Cell Line-Derived Neurotrophic Factor, Glial Cell Line-Derived Neurotrophic Factor Receptors, Humans, Ligands, Male, Molecular Sequence Data, Nerve Tissue Proteins metabolism, Phosphorylation, Proto-Oncogene Proteins biosynthesis, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins c-ret, Rats, Rats, Wistar, Receptor Protein-Tyrosine Kinases biosynthesis, Receptor Protein-Tyrosine Kinases genetics, Receptors, Cell Surface biosynthesis, Receptors, Cell Surface genetics, Tyrosine metabolism, Drosophila Proteins, Glycosylphosphatidylinositols metabolism, Membrane Glycoproteins, Nerve Growth Factors, Nerve Tissue Proteins physiology, Proto-Oncogene Proteins physiology, Receptor Protein-Tyrosine Kinases physiology, Receptors, Nerve Growth Factor
- Abstract
Glial cell line-derived neurotrophic factor (GDNF) mediates neuronal survival through a receptor complex composed of the c-Retproto-oncogene and GFR alpha-1, a member of a family of GPI-anchored receptors. The extent of cross-talk between GDNF and GFR alpha receptors and its possible significance for c-Ret activation is presently unclear. Using chemical crosslinking we demonstrate here a specific interaction between GDNF and GFR alpha-2 expressed in COS cells, albeit of a lower affinity than the one between GDNF and GFR alpha-1. In addition, GFR alpha-2 mediated crosslinking of GDNF of c-Ret as well as ligand-dependent stimulation of c-Ret tyrosine phosphorylation. We also describe the isolation of a novel, more divergent member of the GFR alpha family, GFR alpha-3, which did not bind GDNF directly, but was able to mediate crosslinking of GDNF to c-Ret when both receptors were coexpressed in COS cells. Thus, all three GFR alpha receptors mediate GDNF binding to c-Ret with efficiencies GFR alpha-1 > GFR alpha-2 > GFR alpha-3. c-Ret showed high levels of constitutive tyrosine autophosphorylation upon overexpression in COS cells, which was inhibited in a dose-dependent manner by coexpression with any of the GFR alpha receptors, suggesting that GFR alpha s may also provide a gain control mechanism to increase the signal-to-noise ratio of the response to ligand. GFR alpha-2 showed a dynamic pattern of expression in rat brain, distinct from that of GFR alpha-1, characterized by high expression in cortex, basal forebrain, and specific layers of the olfactory bulb, and low or no expression in substantia nigra, cerebellum, and motor nuclei. GFR alpha-2, but not GFR alpha-3 mRNA expression was highly induced in several nuclei after stimulation with kainic acid. In contrast to GFR alpha-1 and GFR alpha-2, GFR alpha-3 expression in postnatal and adult brain was highly restricted. Developmentally regulated expression of GFR alpha-3 was, however, detected in several peripheral organs and ganglia. Together, these results indicate complementary roles for GFR alpha receptors in the regulation of c-Ret activity and the maintenance of distinct neuronal circuits in the central and peripheral nervous systems.
- Published
- 1998
- Full Text
- View/download PDF
48. Targeted expression of a multifunctional chimeric neurotrophin in the lesioned sciatic nerve accelerates regeneration of sensory and motor axons.
- Author
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Funakoshi H, Risling M, Carlstedt T, Lendahl U, Timmusk T, Metsis M, Yamamoto Y, and Ibáñez CF
- Subjects
- Animals, Axons physiology, Mice, Mice, Transgenic, Muscle, Skeletal anatomy & histology, Muscles innervation, Nerve Crush, Nerve Growth Factors genetics, Organ Size, Recombinant Fusion Proteins, Sciatic Nerve, Skin innervation, Motor Neurons cytology, Nerve Growth Factors administration & dosage, Nerve Regeneration, Neurons, Afferent cytology
- Abstract
Peripheral nerve injury markedly regulates expression of neurotrophins and their receptors in the lesioned nerve. However, the role of endogenously produced neurotrophins in the process of nerve regeneration is unclear. Expression of a multifunctional neurotrophin, pan-neurotrophin-1 (PNT-1), was targeted to the peripheral nerves of transgenic mice by using a gene promoter that is specifically activated after nerve lesion but that is otherwise silent in all other tissues and during development. PNT-1 is a chimeric neurotrophin that combines the active sites of the neurotrophins nerve growth factor, brain-derived neurotrophic factor, and neurotrophin-3 and binds and activates all known neurotrophin receptors. In adult transgenic mice, PNT-1 was highly expressed in transected but not in intact sciatic nerve. Morphometric analyses at the electron microscopy level showed increased and accelerated recovery of axon diameter of myelinated fibers in crushed peripheral nerves of transgenic mice compared with wild type. Examination of nerve bundles in target tissues indicated accelerated reinnervation of foot pad dermis and flexor plantaris muscle in transgenic mice. Moreover, transected sensory and motor axons of transgenic mice showed faster and increased return of neurophysiological responses, suggesting an accelerated rate of axonal elongation. Importantly, transgenic mice also showed a markedly ameliorated loss of skeletal muscle weight, indicating functional regeneration of motor axons. Together, these data provide evidence, at both the anatomical and functional levels, that neurotrophins endogenously produced by the lesioned nerve are capable of significantly accelerating the regeneration of both sensory and motor axons after peripheral nerve damage. In addition, our results indicate that exogenous PNT-1 administration may be an effective therapeutic treatment of peripheral nerve injuries.
- Published
- 1998
- Full Text
- View/download PDF
49. Neurotrophin-7: a novel member of the neurotrophin family from the zebrafish.
- Author
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Nilsson AS, Fainzilber M, Falck P, and Ibáñez CF
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, COS Cells, Culture Media, Conditioned, Humans, Molecular Sequence Data, Polymerase Chain Reaction, Rats, Receptor, Nerve Growth Factor, Receptors, Nerve Growth Factor metabolism, Recombinant Proteins genetics, Recombinant Proteins metabolism, Sequence Homology, Amino Acid, Nerve Growth Factors genetics, Nerve Growth Factors metabolism, Phylogeny, Zebrafish genetics, Zebrafish Proteins
- Abstract
A novel member of the neurotrophin family, zebrafish neurotrophin-7 (zNT-7), was isolated from the zebrafish Danio rerio. The amino acid sequence of zNT-7 is more closely related to that of fish nerve growth factor (NGF) and neurotrophin-6 (NT-6) than to that of any other neurotrophin. zNT-7 is, however, equally related to fish NGF and NT-6 (65% and 63% amino acid sequence identity, respectively) indicating that it represents a distinct neurotrophin sequence. zNT-7 contains a 15 amino acid residue insertion in a beta-turn region in the middle of the mature protein. Recombinant zNT-7 was able to bind to the human p75 neurotrophin receptor and to induce tyrosine phosphorylation of the rat TrkA receptor tyrosine kinase, albeit less efficiently than rat NGF. zNT-7 did not interact with rat TrkB or TrkC, indicating a similar receptor specificity as NGF. We propose that a diversification of the NGF subfamily in the neurotrophin evolutionary tree occurred during the evolution of teleost fishes which resulted in the appearance of several additional members, such as zNT-7 and NT-6, structurally and functionally related to NGF.
- Published
- 1998
- Full Text
- View/download PDF
50. Coexpression of mRNA for the full-length neurotrophin receptor trk-C and trk-A in favourable neuroblastoma.
- Author
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Svensson T, Rydén M, Schilling FH, Dominici C, Sehgal R, Ibáñez CF, and Kogner P
- Subjects
- Age Factors, Alternative Splicing, Child, Child, Preschool, Follow-Up Studies, Gene Amplification, Genes, myc genetics, Humans, Infant, Infant, Newborn, Neoplasm Proteins genetics, Neoplasm Staging, Neuroblastoma pathology, Prognosis, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins metabolism, RNA, Messenger metabolism, Receptor Protein-Tyrosine Kinases genetics, Receptor, trkA, Receptor, trkC, Receptors, Nerve Growth Factor genetics, Survival Analysis, Neoplasm Proteins metabolism, Neuroblastoma metabolism, RNA, Messenger analysis, Receptor Protein-Tyrosine Kinases metabolism, Receptors, Nerve Growth Factor metabolism
- Abstract
Neuroblastoma, a childhood tumour of the sympathetic nervous system, may sometimes regress spontaneously in infants, or progress to a poor clinical outcome despite intensive therapy. Neuroblastomas express neurotrophin receptors and high levels of mRNA for trk-A correlates with favourable outcome, whereas trk-B mRNA is expressed by more unfavourable tumours. Using a sensitive RNase protection assay, mRNA expression for the neurotrophin receptor trk-C was investigated in 50 tumour samples from 45 children at different stages including metastatic and relapsing tumour tissue, out of which 22 were also investigated for trk-A mRNA. Thirty-seven of 43 primary tumours (86%) showed trk-C mRNA with more than 300-fold difference between the highest and the lowest values. A higher trk-C index (trk-C mRNA/GAPDH mRNA) was associated with favourable features such as younger age (P = 0.009-0.003), favourable tumour stage (1, 2 or 4S; P < 0.001) and favourable prognosis (P = 0.044). Better survival probability was shown in children with intermediate or high trk-C index compared with patients with low or undetectable levels (P = 0.031). All localised tumours co-expressed mRNA for trk-A and trk-C receptors. RT-PCR analysis detected mRNA encoding the cytoplasmic trk-C tyrosine kinase region only in favourable neuroblastomas. We conclude that favourable neuroblastoma may express the full-length trk-C receptor while unfavourable tumours, especially those with MYCN amplification, seem to either express no trk-C or truncated trk-C receptors with unknown biological function. Trk-C and possibly its preferred ligand NT-3 may be involved in the biology of favourable neuroblastomas showing apoptosis or differentiation.
- Published
- 1997
- Full Text
- View/download PDF
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