2,073 results on '"Inborn Errors Of Immunity"'
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2. The dilemma of X-linked agammaglobulinemia carriers
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Pulvirenti, Federica, Milito, Cinzia, Cinetto, Francesco, Garzi, Giulia, Sardella, Germano, Spadaro, Giuseppe, Lippi, Francesca, Guarnieri, Valentina, Cinicola, Bianca Laura, Carrabba, Maria, Guadagnolo, Daniele, Fabio, Giovanna, Martire, Baldassarre, Cancrini, Caterina, Lanzoni, Giulia, Finocchi, Andrea, Di Matteo, Gigliola, Pompilii, Eva, Ferrari, Simona, and Quinti, Isabella
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- 2025
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3. Real-world experience of tixagevimab/cilgavimab prophylaxis in Japanese patients with immunodeficiency
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Inoue, Kento, Tomomasa, Dan, Nakagama, Yu, Takeuchi, Hiroaki, Tanaka, Yukie, Tanimoto, Kousuke, Kamiya, Takahiro, Isoda, Takeshi, Takagi, Masatoshi, Tanaka, Keisuke, Yoshifuji, Kota, Miwa, Yuki, Ohnishi, Hidenori, Okada, Satoshi, Mori, Takehiko, Yasuda, Shinsuke, Kido, Yasutoshi, Morio, Tomohiro, and Kanegane, Hirokazu
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- 2025
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4. Perturbations of the T-cell receptor repertoire in response to SARS-CoV-2 in immunocompetent and immunocompromised individuals
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Delmonte, Ottavia M., Oguz, Cihan, Dobbs, Kerry, Myint-Hpu, Katherine, Palterer, Boaz, Abers, Michael S., Draper, Deborah, Truong, Meng, Kaplan, Ian M., Gittelman, Rachel M., Zhang, Yu, Rosen, Lindsey B., Snow, Andrew L., Dalgard, Clifton L., Burbelo, Peter D., Imberti, Luisa, Sottini, Alessandra, Quiros-Roldan, Eugenia, Castelli, Francesco, Rossi, Camillo, Brugnoni, Duilio, Biondi, Andrea, Bettini, Laura Rachele, D’Angio, Mariella, Bonfanti, Paolo, Anderson, Megan V., Saracino, Annalisa, Chironna, Maria, Di Stefano, Mariantonietta, Fiore, Jose Ramon, Santantonio, Teresa, Castagnoli, Riccardo, Marseglia, Gian Luigi, Magliocco, Mary, Bosticardo, Marita, Pala, Francesca, Shaw, Elana, Matthews, Helen, Weber, Sarah E., Xirasagar, Sandhya, Barnett, Jason, Oler, Andrew J., Dimitrova, Dimana, Bergerson, Jenna R.E., McDermott, David H., Rao, V. Koneti, Murphy, Philip M., Holland, Steven M., Lisco, Andrea, Su, Helen C., Lionakis, Michail S., Cohen, Jeffrey I., Freeman, Alexandra F., Snyder, Thomas M., Lack, Justin, and Notarangelo, Luigi D.
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- 2024
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5. Update on inborn errors of immunity
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IJspeert, Hanna, Edwards, Emily S.J., O’Hehir, Robyn E., Dalm, Virgil A.S.H., and van Zelm, Menno C.
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- 2024
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6. Somatic mosaicism in genetic errors of immunity
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Cooper, Megan A.
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- 2024
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7. Inborn errors of immunity reveal molecular requirements for generation and maintenance of human CD4+ IL-9–expressing cells
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Rao, Geetha, Mack, Corinne D., Nguyen, Tina, Wong, Natalie, Payne, Kathryn, Worley, Lisa, Gray, Paul E., Wong, Melanie, Hsu, Peter, Stormon, Michael O., Preece, Kahn, Suan, Daniel, O’Sullivan, Michael, Blincoe, Annaliesse K., Sinclair, Jan, Okada, Satoshi, Hambleton, Sophie, Arkwright, Peter D., Boztug, Kaan, Stepensky, Polina, Cooper, Megan A., Bezrodnik, Liliana, Nadeau, Kari C., Abolhassani, Hassan, Abraham, Roshini S., Seppänen, Mikko R.J., Béziat, Vivien, Bustamante, Jacinta, Forbes Satter, Lisa R., Leiding, Jennifer W., Meyts, Isabelle, Jouanguy, Emmanuelle, Boisson-Dupuis, Stéphanie, Uzel, Gulbu, Puel, Anne, Casanova, Jean-Laurent, Tangye, Stuart G., and Ma, Cindy S.
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- 2024
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8. Biosensors for the detection of protein kinases: Recent progress and challenges
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Fathi, Nazanin, Saadati, Arezoo, Alimohammadi, Masumeh, Abolhassani, Hassan, Sharifi, Simin, Rezaei, Nima, and Hasanzadeh, Mohammad
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- 2022
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9. Long-Term Safety of Facilitated Subcutaneous Immunoglobulin 10% Treatment in US Clinical Practice in Patients with Primary Immunodeficiency Diseases: Results from a Post-Authorization Safety Study.
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Rubinstein, Arye, Mabudian, Mohsen, McNeil, Donald, Patel, Niraj, Wasserman, Richard, Gupta, Sudhir, Carrasco, Paz, Chen, Jie, Garcia, Enrique, Nagy, Andras, and Yel, Leman
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Immunogenicity ,Immunoglobulin replacement ,Inborn errors of immunity ,Quality of life ,Tolerability ,Humans ,Male ,Female ,United States ,Adult ,Adolescent ,Prospective Studies ,Hyaluronoglucosaminidase ,Primary Immunodeficiency Diseases ,Middle Aged ,Infusions ,Subcutaneous ,Child ,Young Adult ,Immunoglobulins ,Injections ,Subcutaneous ,Treatment Outcome ,Aged ,Child ,Preschool ,Immunologic Deficiency Syndromes - Abstract
Facilitated subcutaneous immunoglobulin (fSCIG) 10% is an immunoglobulin replacement therapy that utilizes recombinant human hyaluronidase (rHuPH20) to enhance immunoglobulin dispersion and absorption, allowing for longer treatment intervals similar to intravenous immunoglobulin (up to once monthly). fSCIG 10% is indicated in the USA for treating adults and children aged ≥ 2 years with primary immunodeficiency diseases (PIDs). This prospective, non-interventional, open-label, multicenter, post-authorization safety study (NCT02593188) was conducted in the USA from November 2015 to October 2021 to assess the long-term safety of fSCIG 10% in routine clinical practice. Patients with PIDs aged ≥ 16 years who were prescribed and/or had started fSCIG 10% treatment were enrolled. In total, 253 patients were enrolled and included (full analysis set). Participants received fSCIG 10% treatment for a median (interquartile range) of 10.0 (3.5-11.8) months, with the majority of infusions administered every 4 weeks (54.4% [1197/2201 infusions]) and at home (62.6% [1395/2230 infusions]). Overall, 98.5% of infusions were administered without rate reduction, interruption, or discontinuation due to adverse events (AEs). Treatment-related, non-serious AEs were experienced by 52 patients (20.6%, 284 events). Two patients (0.8%) each experienced one treatment-related serious AE (aseptic meningitis and deep vein thrombosis). Development of antibodies against rHuPH20 was uncommon; 14/196 patients (7.1%) tested positive for binding antibodies (titer ≥ 1:160) with no neutralizing antibodies detected. There was no relationship between anti-rHuPH20 antibody positivity and the occurrence of treatment-related serious or non-serious AEs. Long-term, repeated self-administration of fSCIG 10% was well tolerated in US clinical practice by patients with PIDs.
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- 2024
10. What a Clinician Needs to Know About Genome Editing: Status and Opportunities for Inborn Errors of Immunity
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Mudde, Anne CA, Kuo, Caroline Y, Kohn, Donald B, and Booth, Claire
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Medical Biotechnology ,Biomedical and Clinical Sciences ,Pediatric ,Genetics ,Stem Cell Research ,Biotechnology ,Regenerative Medicine ,Gene Therapy ,Development of treatments and therapeutic interventions ,5.2 Cellular and gene therapies ,Inflammatory and immune system ,Humans ,Gene Editing ,Genetic Therapy ,Animals ,CRISPR-Cas Systems ,Agammaglobulinemia ,Severe Combined Immunodeficiency ,Hematopoietic Stem Cell Transplantation ,Gene editing ,Inborn errors of immunity ,CRISPR/Cas ,Prime editing ,Base editing ,Immunology - Abstract
During the past 20 years, gene editing has emerged as a novel form of gene therapy. Since the publication of the first potentially therapeutic gene editing platform for genetic disorders, increasingly sophisticated editing technologies have been developed. As with viral vector-mediated gene addition, inborn errors of immunity are excellent candidate diseases for a corrective autologous hematopoietic stem cell gene editing strategy. Research on gene editing for inborn errors of immunity is still entirely preclinical, with no trials yet underway. However, with editing techniques maturing, scientists are investigating this novel form of gene therapy in context of an increasing number of inborn errors of immunity. Here, we present an overview of these studies and the recent progress moving these technologies closer to clinical benefit.
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- 2024
11. Proceedings from the inaugural Artificial Intelligence in Primary Immune Deficiencies (AIPID) conference.
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Rivière, Jacques, Soler Palacín, Pere, and Butte, Manish
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Artificial intelligence ,diagnosis ,electronic health records ,ethics ,inborn errors of immunity ,large language models ,machine learning ,natural language processing ,Humans ,Artificial Intelligence ,Machine Learning ,Natural Language Processing ,Data Collection ,Primary Immunodeficiency Diseases - Abstract
Here, we summarize the proceedings of the inaugural Artificial Intelligence in Primary Immune Deficiencies conference, during which experts and advocates gathered to advance research into the applications of artificial intelligence (AI), machine learning, and other computational tools in the diagnosis and management of inborn errors of immunity (IEIs). The conference focused on the key themes of expediting IEI diagnoses, challenges in data collection, roles of natural language processing and large language models in interpreting electronic health records, and ethical considerations in implementation. Innovative AI-based tools trained on electronic health records and claims databases have discovered new patterns of warning signs for IEIs, facilitating faster diagnoses and enhancing patient outcomes. Challenges in training AIs persist on account of data limitations, especially in cases of rare diseases, overlapping phenotypes, and biases inherent in current data sets. Furthermore, experts highlighted the significance of ethical considerations, data protection, and the necessity for open science principles. The conference delved into regulatory frameworks, equity in access, and the imperative for collaborative efforts to overcome these obstacles and harness the transformative potential of AI. Concerted efforts to successfully integrate AI into daily clinical immunology practice are still needed.
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- 2024
12. Pre-Transplant Immune Dysregulation Predicts for Poor Outcome Following Allogeneic Haematopoietic Stem Cell Transplantation in Adolescents and Adults with Inborn Errors of Immunity (IEI).
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Fox, Thomas A., Massey, Valerie, Lever, Charley, Pearce, Rachel, Laurence, Arian, Grace, Sarah, Oliviero, Filippo, Workman, Sarita, Symes, Andrew, Lowe, David M., Fiaccadori, Valeria, Hough, Rachael, Tadros, Susan, Burns, Siobhan O., Seidel, Markus G., Carpenter, Ben, and Morris, Emma C.
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Allogeneic haematopoietic stem cell transplantation (alloHSCT) is safe and effective for adolescents and adults with inborn errors of immunity (IEI) with severe disease manifestations of their disease. The haematopoietic cell transplantation comorbidity index (HCT-CI) score predicts transplant survival in non-malignant diseases, including IEIs. We hypothesised that immune dysregulation pre-transplant may also influence transplant outcomes. We calculated the pre-transplant immune dysregulation and disease activity score (IDDA v2.1) for 82 adolescent and adult IEI patients (aged ≥ 13 years). Three-year overall survival (OS) for the whole cohort was 90% (n = 82) with a median follow up of 44.7 months (range 8.4 to 225.8). Events were defined as acute graft-versus-host disease (GvHD) grades II or above, chronic GvHD of any grade, graft failure, or death from any cause. Three-year event free survival (EFS) for the whole cohort was 72%. In multivariable analysis the IDDA v2.1 score pre-transplant and HCT-CI score significantly impacted OS (hazard ratio 1.08, p = 0.028) and EFS (hazard ratio 1.04, p = 0.0005). Importantly, 35% of this cohort had a high IDDA v2.1 score (≥ 15) and low HCT-CI score (< 3) suggesting that the risks of alloHSCT may be underestimated in a proportion of patients with IEI if the HCT-CI score is used alone. These findings support the potential for improved outcomes following successful modulation of immune dysregulation pre-transplant. The IDDA v2.1 score has utility as an objective measurement of pre-transplant immune dysregulation providing additional information reagrding the risks and potential complications of alloHSCT in an individual IEI patient. [ABSTRACT FROM AUTHOR]
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- 2025
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13. Quantifying the Diagnostic Odyssey Burden Among Persons with Inborn Errors of Immunity.
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Nikzad, Sarina, Johnson, Rebekah, Scalchunes, Christopher, and Rider, Nicholas L.
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Purpose: Patients with inborn errors of immunity (IEI) have lifelong health complications including severe infections and physical impairments. Previous studies show that a patient’s perception of their health is an important predictor of health outcomes. The purpose of this study was to understand factors related to patient reported health status. Methods: We used data from the Immunodeficiency Foundation (IDF) 2017 National Patient Survey and analyzed factors which correlated with the reported health status (RHS). Among a cohort of 1139 self-reported IEI patients, we identified age at the time of diagnosis, time gap between symptom onset and diagnosis, number of physicians seen, and whether the diagnosis was made in the first 5 years of life as significant. We used a two-tailed t-test, single-factor ANOVA, and Tukey-Kramer post-hoc test to assess statistical significance in the observed difference. Results: Patients who received a diagnosis before the age of 12 had a significantly better mean RHS (n = 207 pre-12a vs. n = 900 post-12a; p < 0.0001). Patients who received a diagnosis within 10 years of symptom onset showed improved mean RHS (n = 413 pre-10 vs. n = 524 post-10; p < 0.0001). Among patients who had symptom onset within the first 5 years of life, those who received a diagnosis had a significantly improved RHS (3.5 ± 0.92, n = 275 undiagnosed vs. 2.8 ± 0.94, n = 108 diagnosed; p < 0.0001). Finally, RHS was significantly impacted by number of physicians(n ≥ 4) seen prior to diagnosis (3.1 ± 0.96 vs. 3.4 ± 0.80, p < 0.0001). Conclusion: These findings shed light upon critical factors which impact IEI patient RHS. Specifically, we find that efficient, rapid and early-life IEI identification should improve patient reported health and relevant outcomes. These improvements appear to be independent of the clinician specialty ultimately making the IEI diagnosis. [ABSTRACT FROM AUTHOR]
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- 2025
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14. Outcomes of Hematopoietic Cell Transplantation in Children with Inborn Errors of Immunity: A Single-Center Series.
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Hashem, Hasan, Ghatasheh, Lubna, Najjar, Rula, Mufarrej, Duaa, Zandaki, Duaa, Shanap, Mayada Abu, Khattab, Eman, Rihani, Rawad, and Sultan, Iyad
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Inborn errors of immunity (IEI) are a heterogenous group of rare monogenic disorders that affect innate or adaptive immunity, resulting in susceptibility to life-threatening infections and autoimmunity. Allogeneic hematopoietic cell transplantation (HCT) is a valuable curative option for children with IEI. We conducted a retrospective single-center study on the outcome of HCT in children with IEI. Primary outcome was overall survival (OS). We gathered data from 55 patients underwent HCT in the period 2014 to 2023. The indications for HCT were CGD (n = 14), HLH (n = 12), SCID (n = 10), and others (n = 19). Median age at HCT was 3 years (range 0.1–17). Donors were HLA-matched related (n = 27), haploidentical (n = 24), and cord (n = 4). The conditioning regimens were myeloablative (n = 34), reduced intensity (n = 18), or no conditioning (n = 3). After a median follow-up of 43 months (range 13–120), 2-year OS was 93%, 2-year EFS 79% and 2 year GvHD-free relapse-free survival (GRFS) was 69%. Univariate analysis showed that bone marrow source was significantly associated with better EFS and GRFS. Cumulative incidence of grade 2–4 acute and moderate/severe chronic GvHD were 21% and 13%, respectively. Incidence of graft failure was 13%. In conclusion, HCT is feasible and curative in children with IEI. Early diagnosis and referral in addition to timely treatment can further improve outcomes. [ABSTRACT FROM AUTHOR]
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- 2025
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15. Mutational Landscape of Patients with Wiskott Aldrich Syndrome: Update from India.
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Gaikwad, Pallavi, Bargir, Umair A., Jodhawat, Neha, Dalvi, Aparna, Shinde, Shweta, Tamhankar, Parag, Setia, Priyanka, Kambli, Priyanka, Dhawale, Amruta, Temkar, Lavina, Vedpathak, Disha, Jose, Amrutha, Gupta, Maya, Yadav-Malik, Reetika, Dutta, Shubhankar, Bose, Kokoli, Taur, Prasad, Gowri, Vijaya, Iyengar, Vaishnavi, and Chougule, Akshaya
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Purpose: Wiskott-Aldrich syndrome (WAS) is an X-linked genetic disorder characterized by distinctive features including microthrombocytopenia, eczema and recurrent infections. In the present study we report clinical, immunological and molecular spectrum of 41 WAS patients diagnosed over last five years. Methods: Clinical and family history was collected from case records. Comprehensive immunological assessments including lymphocyte subset analysis, and flow cytometry based evaluation of WAS protein (WASP) expressions were performed in patients along with evaluation of carrier status in mothers. Genetic analysis was carried out with either Sanger sequencing or targeted exome sequencing. Results: The patients included in this study presented at a median age of 9.5 months, with two adult cases. Clinical manifestations encompassed thrombocytopenia, eczema, bleeding, diarrhea, respiratory tract infections, CMV infection, and malignancy. Immunological phenotype revealed T cell lymphopenia, B cell lymphopenia, and elevated IgE levels. Flow cytometry analysis of WASP was performed in 36 cases out of which 68.42% demonstrated complete absent expression while others showed reduced expression. Genetic analysis highlighted that the majority of mutations affect the WH1 domain of WASP while both adult patients showed intronic mutations. Molecular Dynamics analysis conducted for the novel variants P398R and G33R showed an average RMSD (Å) higher than that of the wild type, indicating greater structural perturbations in WASP. Conclusion: In the present study we have documented 56.09% novel WAS mutations in Indian cohort. Notably, the application of flow cytometry has emerged as a valuable and efficient diagnostic tool for identifying these WAS patients. [ABSTRACT FROM AUTHOR]
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- 2025
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16. Recommendations for Transitioning Young People with Primary Immunodeficiency Disorders and Autoinflammatory Diseases to Adult Care.
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Israni, Muskan, Alderson, Eliska, Mahlaoui, Nizar, Obici, Laura, Rossi-Semerano, Linda, Lachmann, Helen, Avramovič, Mojca Zajc, Guffroy, Aurelien, Dalm, Virgil, Rimmer, Rachel, Solis, Leire, Villar, Carlota, Gennery, Andrew R., Skeffington, Stephanie, Nordin, Julia, Warnatz, Klaus, Korganow, Anne-Sophie, Antón, Jordi, Cattalini, Marco, and Berg, Stefan
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Purpose: Significant improvements in the prognosis for young patients with Primary Immunodeficiency Diseases (PID) and Autoinflammatory Disorders (AID), which together make up the majority of Inborn Errors of Immunity (IEI), have resulted in the need for optimisation of transition and transfer of care to adult services. Effective transition is crucial to improve health outcomes and treatment compliance among patients. Evaluations of existing transition programmes in European health centres identified the absence of disease-specific transition guidelines for PID and AID, as a challenge to the transition process. This research aimed to establish expert consensus statements for the transition of young patients with PID and AID to adult services. Methods: This project used the Delphi method to establish mutual agreement for the proposed recommendations. A draft set of statements was developed following a literature review of existing transition programmes. Then the ERN RITA Transition Working Group convened to review the drafted recommendations and develop them into a survey. This survey was circulated among healthcare professionals to determine consensus using a five-point Likert scale, with the level of agreement set to 80% or greater. Statements that did not reach consensus were revised by the Working Group and recirculated among respondents. Results: The initial survey received 93 responses from 68 centres across 23 countries, while the following survey outlining revised recommendations received 66 responses. The respondents agreed upon recommendations detailing the structure and administration of transition programmes, collaborative working with social systems, and contraindications to transfer of care. Conclusion: This paper sets out a comprehensive set of recommendations to optimise transitional care for PID and AID. [ABSTRACT FROM AUTHOR]
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- 2025
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17. Molecular and Clinical Characterization of a Founder Mutation Causing G6PC3 Deficiency.
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Zhen, Xin, Betti, Michael J., Kars, Meltem Ece, Patterson, Andrew R., Medina-Torres, Edgar Alejandro, Scheffler Mendoza, Selma Cecilia, Herrera Sánchez, Diana Andrea, Lopez-Herrera, Gabriela, Svyryd, Yevgeniya, Mutchinick, Osvaldo M., Gamazon, Eric R., Rathmell, Jeffrey C., Itan, Yuval, Markle, Janet, O’Farrill Romanillos, Patricia, Lugo-Reyes, Saul Oswaldo, and Martinez-Barricarte, Ruben
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G6PC3 deficiency is a monogenic immunometabolic disorder that causes severe congenital neutropenia type 4. Patients display heterogeneous extra-hematological manifestations, contributing to delayed diagnosis. Here, we investigated the origin and functional consequence of the G6PC3 c.210delC variant found in patients of Mexican descent. Based on the shared haplotypes amongst mutation carriers, we estimated that this variant originated from a founder effect in a common ancestor. Furthermore, by ancestry analysis, we concluded that it appeared in the indigenous Mexican population. At the protein level, we showed that this frameshift mutation leads to an aberrant protein expression in overexpression and patient-derived Epstein-Barr Virus-immortalized B (EBV-B) cells. The neutropenia observed in G6PC3-deficient patients is driven by the intracellular accumulation of the metabolite 1,5-anhydroglucitol-6-phosphate (1,5-AG6P) that inhibits glycolysis. We characterized how the c.210delC variant impacts glycolysis by performing extracellular flux assays on patient-derived EBV-B cells. When treated with 1,5-anhydroglucitol (1,5-AG), the precursor to 1,5-AG6P, patient cells exhibited markedly reduced engagement of glycolysis. Finally, we compared the clinical presentation of patients with the mutation c.210delC and all other G6PC3-deficient patients reported in the literature, and we found that the c.210delC carriers display all prominent clinical features observed in prior patients. In conclusion, G6PC3 c.210delC is a loss-of-function mutation that arose from a founder effect in the indigenous Mexican population. These findings may facilitate the diagnosis of additional patients in this geographical area. Moreover, the in vitro 1,5-AG-dependent functional assay used in our study could be employed to assess the pathogenicity of additional G6PC3 variants. [ABSTRACT FROM AUTHOR]
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- 2025
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18. Dupilumab in atopic-dermatitis-like eczema associated with inborn errors of immunity: A nationwide study.
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Guillemin, Claire, Bellon, Nathalia, Jachiet, Marie, Barbarot, Sébastien, Bourrat, Emmanuelle, Chiaverini, Christine, Cougoul, Pierre, Ebbo, Mikaël, Herber, Mathilde, Hubiche, Thomas, Mallet, Stéphanie, Tauber, Marie, Béziat, Vivien, Castelle, Martin, Du Thanh, Aurélie, Farhi, Johathan, Fieschi, Claire, Fournier, Benjamin, Gourguechon, Clément, and Guiddir, Tamazoust
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- 2025
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19. Unmasking inborn errors of immunity: identifying the red flags of immune dysregulation.
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Cortesi, Manuela, Dotta, Laura, Cattalini, Marco, Lougaris, Vassilios, Soresina, Annarosa, and Badolato, Raffaele
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PHOSPHATIDYLINOSITOL 3-kinases ,IMMUNE system ,AUTOIMMUNE diseases ,RARE diseases ,QUALITY of life - Abstract
Inborn errors of immunity (IEI) are rare diseases that affect the immune system. According to the latest International Union of Immunological Societies (IUIS) classification, 485 different IEI have been identified. Even if increased susceptibility to infections is the best-known symptom, IEI are no longer defined by the higher likelihood of infections alone. Immune dysregulation with autoimmune disease and hyperinflammation, lymphoproliferation, and malignancy are common manifestations and could be the only symptoms of IEI that must be recognized. An exclusive focus on infection-centered warning signs would miss around 25% of patients with IEI who initially present with other manifestations. Timely and appropriate diagnosis and treatment are essential to enhance the quality of life (QoL) and, in some cases, survival, as patients are susceptible to life-threatening infections or autoimmunity. In addition, the advantage of early diagnosis in IEI with immune dysregulation (i.e. CTLA4 deficiency, LRBA deficiency, NF-kB1/NF-kB2 deficiency, activated phosphoinositide 3-kinase delta syndrome -APDS-) is the initiation of targeted therapies with precise re-balancing of the dysregulated immune pathways (i.e., biologicals, selective inhibitors) or definitive therapy (i.e., HSCT). [ABSTRACT FROM AUTHOR]
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- 2025
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20. Comparative analysis of protein expression profiles with genotypes in the diagnosis of Inborn Errors of Immunity.
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Oskay Halacli, Sevil, Cagdas, Deniz, Esenboga, Saliha, Inan, Dilan, Yaz, Ismail, Cicek, Begum, Bildik, Hacer Neslihan, and Tezcan, Ilhan
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GENETIC variation , *DIAGNOSTIC errors , *PROTEIN analysis , *FLOW cytometry , *CELLULAR signal transduction - Abstract
AbstractBackgroundObjectiveMethodsConclusionInborn Errors of Immunity (IEIs) are genetic diseases resulting from harmful genetic variations that hinder the proper functioning of the immune system. The broad range of IEIs involves multiple systems, presenting characteristics similar to allergies, autoimmune or inflammatory diseases, and malignancies. Given this complexity, there is an urgent need for a precise multi-parametric molecular diagnostic approach.In this work, we demonstrated the effectiveness of accurate diagnosis by flow cytometry in patients with IEI by comparing genotype analysis with the expression levels of particular proteins and signaling activities.We examined the expression levels or signaling activities of 28 cell surface and intracellular proteins using flow cytometry in a cohort of 352 patients and 189 healthy controls, in conjunction with genotype analysis for comparison. Results: We identified alterations in protein expression in 60 individuals, among them, 55 exhibited the presence of an underlying pathogenic mutation. Complete loss of protein expression was observed in seven patients, constituting 2% of the total, while reduced protein expression was noted in 35 patients (9%). Notably, despite mutations in the relevant genes, protein expression levels were normal in five patients (2%), in all investigated patients. 37% of patients had elevated signaling activity, and 17% were suggestive of a particular IEI diagnosis following protein expression analysis.The correspondence between flow cytometry-based protein analyses and genotype facilitates a prompt diagnosis, providing patients with swift access to therapeutic options. [ABSTRACT FROM AUTHOR]
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- 2024
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21. Complications of the Bacillus Calmette-Guerin vaccine as an early warning sign of inborn errors of immunity: a report of 197 patients.
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Fazlollahi, Mohammad Reza, Goudarzi, Ali, Nourizadeh, Maryam, Alizadeh, Zahra, Tajik, Shaghayegh, Badalzadeh, Mohsen, Sarafzadeh, Shokouh Azam, Mahlooji Rad, Maryam, Adab, Zeinab, Moradi, Leila, Razaghian, Anahita, Sabetkish, Nastaran, Pourpak, Zahra, and Moin, Mostafa
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VACCINATION complications ,BCG vaccines ,PRIMARY immunodeficiency diseases ,IRANIANS ,MEDICAL screening - Abstract
Background: According to the WHO's recommendation for developing countries, Bacillus Calmette-Guerin (BCG) vaccination has been implemented in some countries as part of national vaccination programs at birth. Although it is generally considered safe, some complications may occur; including BCGitis (local) or BCGosis (systemic), ranging from mild like local abscesses to fatal impediments like osteomyelitis and disseminated BCG infection. This study aimed to determine the spectrum of inborn errors of immunity (IEI) in BCG-vaccinated neonates experiencing local or systemic complications. Methods: In this cross-sectional study, we investigated Iranian children referred to the Immunology, Asthma, and Allergy Research Institute (IAARI) between 2007-2023 for suspected immunodeficiency. Medical history was recorded, and primary screening tests for immunodeficiency were conducted for all cases. For suspected cases, more advanced immunologic investigations were performed to reach a definitive diagnosis. Furthermore, the study incorporated the documented genetic findings of the patients under investigation. All patients with inborn error of immunity who had a history of BCG vaccine complications within the first year of vaccination were enrolled in the study. Results: We investigated 3,275 cases suspected of IEI, identifying197 patients with both IEI and BCG vaccine complications. Among these, 127 (64.5%) were male. Symptoms began at or before 3 months of age in 64.8% of the cases, and parental consanguinity was reported in 79.2%. Genetic diagnoses were confirmed in 108 patients. Of the 197 patients, 108 (54.8%) had BCGitis, while 89 (45.2%) experienced systemic complications (BCGosis). A family history of IEI, BCG-related complications, and unexplained deaths were observed in 20.3%, 12.2%, and 29.9% of cases, respectively. Furthermore, 46.2% had at least one of these three risk factors in their history. Conclusions: Early BCG vaccine complications may indicate an underlying immunodeficiency, particularly when there is a positive family history of BCG complications, immunodeficiency, or unexplained deaths. Nation-wide vaccination protocols should address this issue by delaying inoculation to allow for immunological screening of suspected immunodeficient patients, thereby preventing BCG vaccine-related morbidity and mortality. [ABSTRACT FROM AUTHOR]
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- 2024
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22. Enforced CARD11/MALT1 signaling in dendritic cells triggers hemophagocytic lymphohistiocytosis.
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Isay, Sophie E., Vornholz, Larsen, Schnalzger, Theresa, Groll, Tanja, Magg, Thomas, Loll, Patricia, Weirich, Gregor, Steiger, Katja, Hauck, Fabian, and Ruland, Jürgen
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HEMOPHAGOCYTIC lymphohistiocytosis , *MACROPHAGES , *ANTIGEN receptors , *DENDRITIC cells , *CELL communication - Abstract
Hemophagocytic lymphohistiocytosis (HLH) is a life-threatening syndrome fueled by uncontrolled mononuclear phagocyte activity, yet the innate immune mechanisms driving HLH pathogenesis remain elusive. Germline gain-of-function (GOF) mutations in CARD11, a pivotal regulator of lymphocyte antigen receptor signaling, cause the lymphoproliferative disease B-cell expansion with NF-κB and T-cell anergy, which is frequently associated with HLH development. Given that CARD11 is physiologically expressed not only in lymphocytes but also in dendritic cells (DCs), we explored whether enforced CARD11 signaling in DCs contributes to immunopathology. We demonstrated that exclusive DC-intrinsic expression of CARD11-GOF in mice was sufficient to induce a lethal autoinflammatory syndrome that mimicked human HLH. Mechanistically, DC-intrinsic CARD11-GOF signaling triggered cell-autonomous inflammatory cytokine production via MALT1 paracaspase engagement. Genetic deletion of Malt1 in CARD11-GOF-expressing animals reversed the hyperinflammatory phenotype. These results highlight the significant role of enforced CARD11/MALT1 signaling in DCs as a contributor to HLH pathology and suggest potential therapeutic strategies for HLH treatment. [ABSTRACT FROM AUTHOR]
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- 2024
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23. Case report: Pediatric patient with severe clinical course of CTLA-4 insufficiency treated with HSCT.
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Drabko, Katarzyna, Zarychta, Julia, Kowalczyk, Adrian, and Cienkusz, Magdalena
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HEMATOPOIETIC stem cell transplantation ,CHILD patients ,RESPIRATORY infections ,HEMATOLOGIC malignancies ,IDIOPATHIC thrombocytopenic purpura - Abstract
Background: Cytotoxic T lymphocyte–associated antigen-4 (CTLA-4) insufficiency is a rare disease belonging to inborn errors of immunity. Most cases of patients with CTLA-4 insufficiency are diagnosed in adults, therefore it is not a common problem in the clinical practice of pediatricians. However, it is worth noticing that most cases described in the literature show the first symptoms of the disease before the age of 18, but the phenotypic variability of patients complicates and delays the diagnostic process. Case description: Herein, we report a case of an almost 4-year-old patient whose first symptom of CTLA-4 insufficiency was thrombocytopenia after an upper respiratory tract infection, suggesting the diagnosis of primary immune thrombocytopenia, often occurring in pediatric patients. Due to the addition of symptoms suggesting a proliferative disease in this patient (pancytopenia, enlargement of lymph nodes, liver and spleen), a bone marrow biopsy was performed 11 months later, which did not confirm a hematopoietic tumor. Two years after the first symptoms appeared, the patient was referred for next-generation sequencing genetic testing, which confirmed the presence of a pathological CTLA-4 variant (c.356T>C). Due to the patient's lack of response to the pharmacological treatment and the intensification of autoimmune symptoms that threatened the patient's life, the patient underwent hematopoietic stem cell transplantation (HSCT) 34 months after the first occurrence of symptoms. After HSCT, the patient is alive and does not present any symptoms of autoimmunity. Conclusions: The first symptoms of some diseases classified as inborn errors of immunity are non-specific and may delay the final diagnosis. Therefore, it seems extremely important that practicing pediatricians should take into account inborn errors of immunity in the differential diagnosis of autoimmune diseases. [ABSTRACT FROM AUTHOR]
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- 2024
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24. Indolent B-cell non-Hodgkin lymphomas in children: high association with inborn errors of immunity.
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Kurucu, Nilgün, Kutluk, Tezer, Sağlam, Arzu, Cagdas, Deniz, Haliloğlu, Mithat, Salancı, Bilge Volkan, Aydın, Burça, Yalçın, Bilgehan, Varan, Ali, and Üner, Ayşegül
- Subjects
- *
MUCOSA-associated lymphoid tissue lymphoma , *CHILDHOOD cancer , *NON-Hodgkin's lymphoma , *FOLLICULAR lymphoma , *LYMPHOMAS - Abstract
Indolent lymphomas are rare in children and mostly consist of pediatric type follicular (PTFL) and pediatric marginal zone lymphomas (PMZL) and extranodal marginal zone lymphoma (ENMZL). Twenty children with indolent lymphoma (10 PTFL, 6 PMZL, 3 ENMZL, 1 mixed type) among 307 Non-Hodgkin Lymphoma (NHL) were retrospectively evaluated. The mean age of the entire group was 10.4 ± 4.4 and was significantly lower in PTFL than in PMZL. Seven patients (35%) had an associated inborn error of immunity (IEI) which was higher than that seen in aggressive lymphomas (5.9%) (p < 0.0001). Seventeen patients (85%) had stage I/II disease. Two patients received no treatment after surgery. Eleven patients were treated only with 3-6 courses of rituximab. Four patients received 3-6 courses of R-CHOP protocol. The prognosis was excellent Five years overall and event-free survivals were 100% and 85%, respectively. [ABSTRACT FROM AUTHOR]
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- 2024
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25. Reduction in mucosal‐associated invariant T cells (MAIT) in APECED patients is associated with elevated serum IFN‐γ concentration.
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Hetemäki, Iivo, Sarkkinen, Joona, Wong, Huai Hui, Heikkilä, Nelli, Laakso, Saila, Miettinen, Simo, Mäyränpää, Mikko I., Mäkitie, Outi, Arstila, T Petteri, and Kekäläinen, Eliisa
- Subjects
T cells ,DATA reduction ,CD3 antigen ,CANDIDIASIS ,LYMPHOCYTES - Abstract
Mucosal‐associated invariant T cells (MAIT) are innate‐like lymphocytes enriched in mucosal organs where they contribute to antimicrobial defense. APECED is an inborn error of immunity characterized by immune dysregulation and chronic mucocutaneous candidiasis. Reduction in the frequency of circulating MAITs has been reported in many inborn errors of immunity, but only in a few of them, the functional competence of MAITs has been assessed. Here, we show in a cohort of 24 patients with APECED, that the proportion of circulating MAITs was reduced compared with healthy age and sex‐matched controls (1.1% vs. 2.6% of CD3+ T cells; p < 0.001) and the MAIT cell immunophenotype was more activated. Functionally the IFN‐γ secretion of patient MAITs after stimulation was comparable to healthy controls. We observed in the patients elevated serum IFN‐γ (46.0 vs. 21.1 pg/mL; p = 0.01) and IL‐18 (42.6 vs. 13.7 pg/mL; p < 0.001) concentrations. Lower MAIT proportion did not associate with the levels of neutralizing anti‐IL‐22 or anti‐IL‐12/23 antibodies but had a clear negative correlation with serum concentrations of IFN‐γ, IL‐18, and protein C‐reactive protein. Our data suggest that reduction of circulating MAITs in patients with APECED correlates with chronic type 1 inflammation but the remaining MAITs are functionally competent. [ABSTRACT FROM AUTHOR]
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- 2024
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26. Case report: A novel JAK3 homozygous variant in a patient with severe combined immunodeficiency and persistent COVID-19.
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Sbruzzi, Renan Cesar, Prado, Mayara Jorgens, Fam, Bibiana, Prolla, Helena Ashton, Hellwig, Alessandra, Motta Rodrigues, Grazielle, de-Paris, Fernanda, Jobim, Mariana, Artigalás, Osvaldo, Seeleuthner, Yoann, Casanova, Jean-Laurent, Bustamante, Jacinta, and Vianna, Fernanda Sales Luiz
- Subjects
HEMATOPOIETIC stem cell transplantation ,MISSENSE mutation ,HYDROPHOBIC interactions ,DISEASE relapse ,SYMPTOMS ,SEVERE combined immunodeficiency - Abstract
Inborn errors of immunity (IEI) encompass a broad range of disorders with heterogeneous clinical presentations, often leading to challenges in early diagnosis. This study presents a case of a Brazilian patient with a T-B+NK- severe combined immunodeficiency (SCID) diagnosed at the age of 6 months when was admitted to the hospital due to multiple infectious diseases. Despite undergoing hematopoietic stem cell transplantation (HSCT), the patient had recurrent infections, requiring constant hospital care, including IgG infusions and several antibiotic treatments for the following months. One year after HSCT, presenting mixed chimerism, the patient tested positive for SARS-CoV-2 in nasopharyngeal, duodenum, and intestine samples, with persistent positive tests over a six-month period. Whole exome sequencing identified a private homozygous missense variant (c.1202T>C; p.Leu401Pro) in the Janus Kinase 3 (JAK3) gene. This substitution is located in a highly conserved position, and different bioinformatic variant effect predictors classified the variant as damaging. In silico structural analysis suggested that the variant led to increased structural instability, disrupting the hydrophobic interactions within the SH2 domain, thereby influencing the neighboring residues and potentially altering the interaction between JAK3 and gamma chain (γc) intracellular receptors. This study provides evidence for the novel pathogenicity classification of the variant and highlights the importance of the JAK3 and SH2 domain modulating protein function and their contribution to the SCID pathogenesis. [ABSTRACT FROM AUTHOR]
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- 2024
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27. The Microbe, the Infection Enigma, and the Host.
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Casanova, Jean-Laurent and Abel, Laurent
- Abstract
Human infectious diseases are unique in that the discovery of their environmental trigger, the microbe, was sufficient to drive the development of extraordinarily effective principles and tools for their prevention or cure. This unique medical prowess has outpaced, and perhaps even hindered, the development of scientific progress of equal magnitude in the biological understanding of infectious diseases. Indeed, the hope kindled by the germ theory of disease was rapidly subdued by the infection enigma, in need of a host solution, when it was realized that most individuals infected with most infectious agents continue to do well. The root causes of disease and death in the unhappy few remained unclear. While canonical approaches in vitro (cellular microbiology), in vivo (animal models), and in natura (clinical studies) analyzed the consequences of infection with a microbe, considered to be the cause of disease, in cells, tissues, or organisms seen as a uniform host, alternative approaches searched for preexisting causes of disease, particularly human genetic and immunological determinants in populations of diverse individuals infected with a trigger microbe. [ABSTRACT FROM AUTHOR]
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- 2024
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28. Delineating the Clinical and Immunologic Characteristics: A Comparative Study of Inborn Errors of Immunity in Adult versus Pediatric Diagnosed.
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Karabiber, Esra and Baris, Safa
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DELAYED diagnosis , *PRIMARY immunodeficiency diseases , *SYMPTOMS , *IDIOPATHIC thrombocytopenic purpura , *GENETIC mutation - Abstract
Introduction: Inborn errors of immunity (IEIs) are rare genetic disorders primarily identified in children due to their significant effects on immune system functionality. However, an increasing number of IEI cases are being diagnosed in adults, attributed to delayed presentation or advancements in diagnostic capabilities. This study explores the clinical and immunologic distinctions between IEIs diagnosed in adulthood versus childhood, shedding light on their differential presentations, the impact of diagnostic delays, and treatment outcomes. Methods: This study focused on 122 adult patients with IEI above 17 years old, diagnosed in adulthood or childhood. We collected comprehensive data on demographics, clinical presentations, genetic mutations, and therapeutic interventions. Results: The study revealed that 72.9% of participants were diagnosed in adulthood, facing a median diagnostic delay of 96 months. Diagnostic delays were longer in adults (132 months vs. 24 months) than in children. The most common clinical manifestations at onset were recurrent infections (46.7%) and autoimmunity (18%). Predominantly antibody deficiency was the most frequently diagnosed immunodeficiency (54.9%), followed by immunodysregulation at a rate of 26.2%. A higher incidence of immune thrombocytopenia or other complications, such as hepatomegaly and enteropathy, was observed in adult-diagnosed patients with IEI. Malignancies were more prevalent in patients with adult-onset IEI compared to those with childhood-onset (18.1% vs. 5.2%). Overall, 15 different malignancies were recorded in 13 patients (10.6%), including lymphomas and cancers of the stomach, thymus, skin, breast, and colon. Conclusions: The findings highlight a considerable diagnostic delay in recognizing IEI, especially in adults, and illustrate distinct differences in disease manifestation and progression between adult-onset and delayed-diagnosis groups. [ABSTRACT FROM AUTHOR]
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- 2024
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29. Decreased T‐cell response against latent cytomegalovirus infection does not correlate with anti‐IFN autoantibodies in patients with APECED.
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Hetemäki, Iivo, Heikkilä, Nelli, Peterson, Pärt, Kekäläinen, Eliisa, Willcox, Nick, Anette S. B., Wolff, Jarva, Hanna, and Arstila, T Petteri
- Subjects
- *
TYPE I interferons , *LATENT infection , *CYTOMEGALOVIRUS diseases , *FALSE positive error , *VIRUS diseases - Abstract
Autoimmune polyendocrinopathy‐candidiasis‐ectodermal dystrophy (APECED) is an inborn error of immunity affecting both multiple endocrine organs and susceptibility to candidiasis, each with an autoimmune basis. Recently, high titer neutralizing anti‐type I interferon (IFN) autoantibodies have been linked with increased severity of SARS‐CoV‐2 and varicella zoster virus infections in APECED patients. Examining immunity against cytomegalovirus (CMV), we found a higher prevalence of anti‐CMV IgG antibodies in patients with APECED (N = 19) than in 44 healthy controls (90% vs 64%, p = 0.04); the similar difference in their IgG levels did not achieve significance (95 ± 74 vs 64 ± 35 IU/mL, ns.). In contrast, the frequency of CMV‐specific T cells was lower (804 ± 718/million vs 1591 ± 972/million PBMC p = 0.03). We saw no correlations between levels of anti‐CMV IgG and anti‐IFN antibodies in APECED patients or in a separate cohort of patients with thymoma (n = 70), over 60% of whom also had anti‐IFN antibodies. Our results suggest a dysregulated response to CMV in APECED patients and highlight immunodeficiency to viral infections as part of the disease spectrum. [ABSTRACT FROM AUTHOR]
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- 2024
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30. Human DNA-dependent protein kinase catalytic subunit deficiency: A comprehensive review and update.
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Adelon, Jihane, Abolhassani, Hassan, Esenboga, Saliha, Fouyssac, Fanny, Cagdas, Deniz, Tezcan, Ilhan, Kuskonmaz, Barıs, Cetinkaya, Duygu, Suarez, Felipe, Mahdaviani, Seyed Alireza, Plassart, Samira, Mathieu, Anne-Laure, Fabien, Nicole, Malcus, Christophe, Morfin-Sherpa, Florence, Billaud, Geneviève, Tusseau, Maud, Benezech, Sarah, Walzer, Thierry, and De Villartay, Jean-Pierre
- Abstract
[Display omitted] DNA-dependent protein kinase catalytic subunit (DNA-PKcs) has an essential role in the non–homologous end-joining pathway that repairs DNA double-strand breaks in V(D)J recombination involved in the expression of T- and B-cell receptors. Whereas homozygous mutations in Prkdc define the Scid mouse, a model that has been widely used in biology, human mutations in PRKDC are extremely rare and the disease spectrum has not been described so far. To provide an update on the genetics, clinical spectrum, immunological profile, and therapy of DNA-PKcs deficiency in human. The clinical, biological, and treatment data from the 6 cases published to date and from 1 new patient were obtained and analyzed. Rubella PCR was performed on available granuloma material. We report on 7 patients; 6 patients displayed the autosomal recessive p.L3062R mutation in PRKDC -encoding DNA-PKcs. Atypical severe combined immunodeficiency with inflammatory lesions, granulomas, and autoimmunity was the predominant clinical manifestation (n = 5 of 7). Rubella viral strain was detected in the granuloma of 1 patient over the 2 tested. T-cell counts, including naive CD4
+ CD45RA+ T cells and T-cell function were low at diagnosis for 6 patients. For most patients with available values, naive CD4+ CD45RA+ T cells decreased over time (n = 5 of 6). Hematopoietic stem cell transplantation was performed in 5 patients, of whom 4 are still alive without transplant-related morbidity. Sustained T- and B-cell reconstitution was observed, respectively, for 4 and 3 patients, after a median follow-up of 8 years (range 3-16 years). DNA-PKcs deficiency mainly manifests as an inflammatory disease with granuloma and autoimmune features, along with severe infections. [ABSTRACT FROM AUTHOR]- Published
- 2024
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31. Predominantly antibody deficiencies: An important underlying cause of recurrent pneumonia in adults.
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Paredes-Amaya, Claudia C., Rengifo de Lima, María A., Fernandes-Pineda, Mónica, Bonelo-Perdomo, Anilza, Matta Cortes, Lorena, Ospina-Galíndez, Johann A., and Zea-Vera, Andrés Felipe
- Subjects
CILIARY motility disorders ,PRIMARY immunodeficiency diseases ,ETIOLOGY of pneumonia ,BLOOD cell count ,IDIOPATHIC diseases - Abstract
Copyright of Canadian Journal of Respiratory, Critical Care, & Sleep Medicine is the property of Taylor & Francis Ltd and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2024
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32. Dietary intakes and nutritional issues in inborn errors of immunity: a systematic review.
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Freer, Macey, Bhatia, Rani, Preece, Kahn, and Pursey, Kirrilly M.
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COMMON variable immunodeficiency ,PRIMARY immunodeficiency diseases ,ATAXIA telangiectasia ,FOOD consumption ,NUTRITIONAL status - Abstract
Introduction: Inborn errors of immunity (IEI) are characterized by an inherited dysregulation or absence of immune system components that can manifest clinically in complications that predispose an individual to feeding difficulties or impaired swallowing, digestion, and absorption. Treatment side-effects or altered requirements may further impair nutritional status. While adequate nutrition is necessary for optimal growth and immune function, little is known about nutritional intakes in IEI, and best practice nutrition guidelines are limited. This review aimed to synthesize current evidence on the dietary intakes, anthropometry and nutritional biochemistry in individuals with an IEI. Methods: A systematic review of literature published from database inception to March 2023 was conducted in accordance with the PRISMA guidelines. Articles eligible for inclusion reported anthropometric, biochemical, or dietary intakerelated measures in pediatric or adult patients with a diagnosed IEI. Identified articles were screened for eligibility; data was synthesized descriptively. Results: A total of 4488 studies were retrieved of which 34 were included. Across studies, 2894 IEI individuals were included (age range 4 weeks to 83y), predominantly focusing on ataxia telangiectasia (AT) and common variable immunodeficiency (CVID). A significant association between inadequate energy intakes and IEI was identified (n=6 studies); however, there was significant variability in adequacy of macro- and micronutrients across studies. Patients with IEI were at risk of malnutrition (range 30% to 70%); although anthropometric assessment measures were not consistent across studies. Biochemical assessments found patients were also at risk of micronutrient deficiencies including vitamin D. Discussion: This review identified few studies assessing dietary intakes, anthropometry and nutritional biochemistry in patients with IEI, with considerable heterogeneity across studies. Future longitudinal studies using consistent validated dietary assessment tools and anthropometric measures in diverse IEI patient populations are needed. This review reinforces the need for dietetic input in people with an IEI and the development evidence-based clinical practice guidelines for people with an IEI. [ABSTRACT FROM AUTHOR]
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- 2024
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33. Epstein–Barr virus-driven lymphoproliferation in inborn errors of immunity: a diagnostic and therapeutic challenge.
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Barman, Prabal, Basu, Suprit, Goyal, Taru, Sharma, Saniya, Siniah, Sangeetha, Tyagi, Rahul, Sharma, Kaushal, Jindal, Ankur K., Pilania, Rakesh K., Vignesh, Pandiarajan, Dhaliwal, Manpreet, Suri, Deepti, Rawat, Amit, and Singh, Surjit
- Subjects
PRIMARY immunodeficiency diseases ,LYMPHOPROLIFERATIVE disorders ,EPSTEIN-Barr virus ,HEMOPHAGOCYTIC lymphohistiocytosis ,CELL proliferation - Abstract
Introduction: Inborn errors of immunity (IEI) are a group of genetically heterogeneous disorders with a wide-ranging clinical phenotype, varying from increased predisposition to infections to dysregulation of the immune system, including autoimmune phenomena, autoinflammatory disorders, lymphoproliferation, and malignancy. Lymphoproliferative disorder (LPD) in IEI refers to the nodal or extra-nodal and persistent or recurrent clonal or non-clonal proliferation of lymphoid cells in the clinical context of an inherited immunodeficiency or immune dysregulation. The Epstein-Barr virus (EBV) plays a significant role in the etiopathogenesis of LPD in IEIs. In patients with specific IEIs, lack of immune surveillance can lead to an uninhibited proliferation of EBV-infected cells that may result in chronic active EBV infection, hemophagocytic lymphohistiocytosis, and LPD, particularly lymphomas. Areas covered: We intend to discuss the pathogenesis, diagnosis, and treatment modalities directed toward EBV-associated LPD in patients with distinct IEIs. Expert opinion: EBV-driven lymphoproliferation in IEIs presents a diagnostic and therapeutic problem that necessitates a comprehensive understanding of host–pathogen interactions, immune dysregulation, and personalized treatment approaches. A multidisciplinary approach involving immunologists, hematologists, infectious disease specialists, and geneticists is paramount to addressing the diagnostic and therapeutic challenges posed by this intriguing yet formidable clinical entity. [ABSTRACT FROM AUTHOR]
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- 2024
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34. Pharmacokinetics, safety, and efficacy of 20% subcutaneous immunoglobulin (Ig20Gly) administered weekly or every 2 weeks in Japanese patients with primary immunodeficiency diseases: a phase 3, open-label study.
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Kanegane, Hirokazu, Endo, Akifumi, Okada, Satoshi, Ohnishi, Hidenori, Ishimura, Masataka, Nishikomori, Ryuta, Imai, Kohsuke, Nonoyama, Shigeaki, Muramatsu, Hideki, Wada, Taizo, Kuga, Atsushi, Sakamoto, Ko, Russo-Schwarzbaum, Sharon, Chu, Liang-Hui, McCoy, Barbara, Li, Zhaoyang, and Yel, Leman
- Subjects
immunoglobulin replacement therapy ,inborn errors of immunity ,primary immunodeficiencies ,subcutaneous immunoglobulin - Abstract
This phase 3, open-label, multidose study (NCT04346108) evaluated the pharmacokinetics, safety, tolerability, and efficacy of immunoglobulin subcutaneous (human) 20% solution (Ig20Gly) administered weekly and every 2 weeks in Japanese patients with primary immunodeficiency diseases (PIDs). The study was conducted at eight study sites in Japan and enrolled patients aged ≥2 years with PIDs treated using a stable intravenous immunoglobulin dose for ≥3 months prior to the study. Patients received intravenous immunoglobulin every 3 or 4 weeks at pre-study dose (200-600 mg/kg) for 13 weeks (Epoch 1), subcutaneous Ig20Gly (50-200 mg/kg) once weekly for 24 weeks (Epoch 2), and Ig20Gly (100-400 mg/kg) every 2 weeks for 12 weeks (Epoch 3). The primary endpoint was serum total immunoglobulin G (IgG) trough levels during Epochs 2 and 3. Overall, 17 patients were enrolled (median [range] age: 24 [5-69] years; 59% male) and participated in Epochs 1 and 2; seven patients entered Epoch 3. Serum total IgG trough levels were maintained at >8 g/l: geometric means (95% confidence intervals) at the end of Epochs 2 and 3 were 8.56 (8.03-9.12) g/l and 8.39 (7.89-8.91) g/l, respectively. Related treatment-emergent adverse events were all mild in severity; the most common treatment-emergent adverse events (excluding infections) in Epochs 2 and 3 were injection site swelling (24%) and injection site erythema (18%). This is the first trial to demonstrate the efficacy and favourable safety profile of 20% subcutaneous immunoglobulin administered every 2 weeks in adult and paediatric Japanese patients with PIDs.
- Published
- 2024
35. A Phase 1 Open-Label Study to Assess the Tolerability, Safety, and Immunogenicity of Hyaluronidase-Facilitated Subcutaneous Immunoglobulin 20% in Healthy Adults.
- Author
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Nagy, Andras, Duff, Kimberly, Bauer, Alexander, Okonneh, Fred, Rondon, Juan, Yel, Leman, and Li, Zhaoyang
- Subjects
Hyaluronidase-facilitated subcutaneous immunoglobulin 20% ,inborn errors of immunity ,primary immunodeficiency disease ,recombinant human hyaluronidase ,safety ,tolerability ,Male ,Adult ,Humans ,Female ,Hyaluronoglucosaminidase ,Immunoglobulin G ,Injections ,Subcutaneous ,Infusions ,Subcutaneous ,Clinical Protocols - Abstract
PURPOSE: Hyaluronidase-facilitated subcutaneous immunoglobulin (fSCIG) 20% will allow reduced infusion volumes and frequency versus existing subcutaneous therapies such as fSCIG 10% and conventional subcutaneous immunoglobulin 20%, respectively. We assessed the tolerability, safety, and immunogenicity of warmed and unwarmed fSCIG 20%. METHODS: This phase 1, single-dose, open-label, three-arm study enrolled healthy adults aged 19-50 years (inclusive) at a single US center (NCT05059977). Post-screening, participants received a single fSCIG 20% dose comprising recombinant human hyaluronidase and varying doses of in-line warmed or unwarmed immunoglobulin G (IgG) during a 4-day treatment period in a sentinel and sequential dosing design (treatment arm 1, warmed IgG 20% 0.4 g/kg; treatment arm 2, warmed IgG 20% 1.0 g/kg; treatment arm 3, unwarmed IgG 20% 1.0 g/kg). Participants were followed for 12 (± 1) weeks post-infusion. The primary endpoint was tolerability (tolerable infusions were not interrupted, stopped, or reduced in rate owing to fSCIG 20%-related treatment-emergent adverse events (TEAEs)). Secondary endpoints included occurrence of TEAEs. RESULTS: Overall, 24 participants were included, 8 per treatment arm (mean age 39.0 years, 54.2% men). All participants tolerated the infusions. All TEAEs were mild (107 events, in all participants), and all participants experienced fSCIG 20%-related (105 events) and local (102 events) TEAEs. Infusion site erythema and infusion site swelling were most frequently reported. No serious TEAEs occurred, and no participants discontinued the study owing to TEAEs. CONCLUSION: fSCIG 20% was well-tolerated with a favorable safety profile in healthy adults. Future studies will evaluate fSCIG 20% in primary immunodeficiency diseases. Trial registration number (ClinicalTrials.gov): NCT05059977 (registered 28 September 2021).
- Published
- 2023
36. Intestinal microbiome and metabolome signatures in patients with chronic granulomatous disease.
- Author
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Chandrasekaran, Prabha, Han, Yu, Zerbe, Christa, Heller, Theo, DeRavin, Suk, Kreuzberg, Samantha, Marciano, Beatriz, Siu, Yik, Jones, Drew, Abraham, Roshini, Stephens, Michael, Tsou, Amy, Snapper, Scott, Conlan, Sean, Subramanian, Poorani, Quinones, Mariam, Grou, Caroline, Calderon, Virginie, Deming, Clayton, Leiding, Jennifer, Arnold, Danielle, Logan, Brent, Griffith, Linda, Petrovic, Aleksandra, Mousallem, Talal, Kapoor, Neena, Heimall, Jennifer, Barnum, Jessie, Kapadia, Malika, Wright, Nicola, Rayes, Ahmad, Chandra, Sharat, Broglie, Larisa, Chellapandian, Deepak, Deal, Christin, Grunebaum, Eyal, Lim, Stephanie, Mallhi, Kanwaldeep, Marsh, Rebecca, Murguia-Favela, Luis, Parikh, Suhag, Touzot, Fabien, Cowan, Morton, Dvorak, Christopher, Haddad, Elie, Kohn, Donald, Notarangelo, Luigi, Pai, Sung-Yun, Puck, Jennifer, Pulsipher, Michael, Torgerson, Troy, Kang, Elizabeth, Malech, Harry, Segre, Julia, Bryant, Clare, Holland, Steven, and Falcone, Emilia
- Subjects
CGD ,Chronic granulomatous disease ,IBD ,NADPH oxidase ,dysbiosis ,inborn errors of immunity ,inflammatory bowel disease ,intestinal inflammation ,metabolome ,microbiome ,primary immune deficiency ,Humans ,Granulomatous Disease ,Chronic ,Gastrointestinal Microbiome ,NADPH Oxidases ,Cross-Sectional Studies ,Inflammatory Bowel Diseases - Abstract
BACKGROUND: Chronic granulomatous disease (CGD) is caused by defects in any 1 of the 6 subunits forming the nicotinamide adenine dinucleotide phosphate oxidase complex 2 (NOX2), leading to severely reduced or absent phagocyte-derived reactive oxygen species production. Almost 50% of patients with CGD have inflammatory bowel disease (CGD-IBD). While conventional IBD therapies can treat CGD-IBD, their benefits must be weighed against the risk of infection. Understanding the impact of NOX2 defects on the intestinal microbiota may lead to the identification of novel CGD-IBD treatments. OBJECTIVE: We sought to identify microbiome and metabolome signatures that can distinguish individuals with CGD and CGD-IBD. METHODS: We conducted a cross-sectional observational study of 79 patients with CGD, 8 pathogenic variant carriers, and 19 healthy controls followed at the National Institutes of Health Clinical Center. We profiled the intestinal microbiome (amplicon sequencing) and stool metabolome, and validated our findings in a second cohort of 36 patients with CGD recruited through the Primary Immune Deficiency Treatment Consortium. RESULTS: We identified distinct intestinal microbiome and metabolome profiles in patients with CGD compared to healthy individuals. We observed enrichment for Erysipelatoclostridium spp, Sellimonas spp, and Lachnoclostridium spp in CGD stool samples. Despite differences in bacterial alpha and beta diversity between the 2 cohorts, several taxa correlated significantly between both cohorts. We further demonstrated that patients with CGD-IBD have a distinct microbiome and metabolome profile compared to patients without CGD-IBD. CONCLUSION: Intestinal microbiome and metabolome signatures distinguished patients with CGD and CGD-IBD, and identified potential biomarkers and therapeutic targets.
- Published
- 2023
37. Clinical and molecular profile of 20 patients with DOCK8 deficiency—a single-center experience from Southern India.
- Author
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Singh, Neha, Ranganath, Priya, Jayaram, Ananthvikas, Jhawar, Prerna, Kotecha, Udhaya, Janardhanan, Jyothi, Kumar, Harish, Sudheer, K. A, Ali, Syed Mohammed Naushad, Arigela, Karthik, Ginigeri, Chetan, and Bhattad, Sagar
- Abstract
DOCK8 deficiency is the most common cause of autosomal recessive hyper-IgE syndrome (AR-HIES). The clinical spectrum is wide resulting in combined immunodeficiency, atopy, autoimmunity, and malignancies. To study the clinical and molecular profile of 20 patients with DOCK8 deficiency. Four hundred and eight patients with various inborn errors of immunity (IEIs) were diagnosed in the Pediatric Immunology Unit of our hospital during the study period of February 2017 to August 2023. Based on the clinical and immunological phenotype, DOCK8 deficiency was suspected in 31 patients. Genetic studies confirmed DOCK8 deficiency in 20 patients, and their profile was analyzed in detail. Twenty patients from 17 kindreds were diagnosed with DOCK8 deficiency. The female-to-male ratio was 1.2:1. The mean age at onset of symptoms and diagnosis was 9.8 and 69.8 months, respectively. Thirteen out of 17 families (76%) reported consanguinity. Eczema was the presenting manifestation in 19 patients (95%). Mucocutaneous manifestations included oromucosal hyperpigmentation (n = 8), scalp seborrhoea (n = 2), psoriasis (n = 2), and alopecia (n = 1). The spectrum of infections included pneumonia (n = 14), otitis media (n = 6), gastrointestinal infections (n = 6), cutaneous viral infections (n = 5), oral candidiasis (n = 4), and meningoencephalitis (n = 2). Three patients had developed bronchiectasis. Four patients had autoimmune manifestations including autoimmune hemolytic anemia (n = 2) and vasculitis (n = 2). The whole exome sequencing showed deletions (8 kindreds) as the most common mutation in the DOCK8 gene. Overall, 11 of these mutations were novel. Ten patients were on monthly intravenous immunoglobulin therapy and antibiotic prophylaxis at the time of writing this paper. Three patients underwent hematopoietic stem cell transplants elsewhere, two of whom succumbed to post-transplant complications and one is doing well. Nine patients died during the study period. We present one of the largest single-center experiences on DOCK8 deficiency from India. A significant delay in the diagnosis contributed to poor outcomes in our cohort. [ABSTRACT FROM AUTHOR]
- Published
- 2025
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38. Immune Deficiency and Autoinflammation, the ' Yin' and ' Yang' of the Immune System
- Author
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ZHOU Yu and SONG Hongmei
- Subjects
inborn errors of immunity ,autoinflammatory ,immune dysfunction ,Medicine - Abstract
Inborn errors of immunity (IEI) are immune system disorders caused by genetic mutations, often presenting with varying degrees of infection, immune dysregulation, lymphoproliferation, and tumor susceptibility. Initially, IEIs were typically diagnosed in patients with recurrent and unusual infections. However increasing research has shown that noninfectious manifestations can also be the initial or even primary presentation of IEI. Over the past ten years, more and more IEIs associated with autoinflammatory symptoms have been identified. Although these diseases are rare, relevant research suggests that immune deficiency and autoinflammation are not opposing conditions but rather interconnected aspects of the immune system, influencing each other in a complementary and inseparable manner. This article reviews the mechanisms involved in IEI with autoinflammation, and proposes some clues for identifying IEI manifested as autoinflammation. It also summarizes the current progress in the diagnosis and treatment of IEI manifested as autoinflammation, and presents prospects for future research on IEI.
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- 2024
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39. The Hyperactivation of JAK-STAT Signaling Connects Inborn Errors of Immunity and Autoimmune Diseases
- Author
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JIANG Yi, AN Yunfei, and ZHAO Xiaodong
- Subjects
jak-stat signaling pathway ,inborn errors of immunity ,autoimmune diseases ,Medicine - Abstract
JAK-STAT signaling pathway is an important cytokine signaling transduction pathway. Many monogenic loss-of-function or gain-of-function mutations in this pathway can cause inborn errors of immunity (IEI). Autoimmune diseases are caused by polygenic and different factors.The etiology of the disease is complex and diverse. The over-activation of JAK-STAT signaling pathway plays a significant role in the pathogenesis of autoimmune diseases. In this article, we summarize the mechanism of the JAK-STAT pathway and its role in the occurrence and development of IEI and autoimmune diseases, suggesting that the hyperactivation of JAK-STAT pathway having connection with IEI and autoimmune diseases. Meanwhile, we hope to make IEI a good model to study the pathogenesis of autoimmune diseases and to provide new ideas and directions for the clinical treatment of autoimmune diseases.
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- 2024
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40. Infusion parameters, safety, and practical guidance for the manual administration of subcutaneous immunoglobulin 20% (Ig20Gly)
- Author
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Dorothea Grosse-Kreul, Crystal Allen, Chrystyna Kalicinsky, and Paul K. Keith
- Subjects
Home infusion ,Inborn errors of immunity ,Manual push ,Primary immunodeficiencies ,Rapid push ,SCIG 20% ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Primary immunodeficiency diseases (PIDs), also referred to as inborn errors of immunity, constitute a group of genetic conditions that affect the immune system. The current standard of care for patients with PIDs is lifelong immunoglobulin replacement therapy, delivered by intravenous (IVIG) or subcutaneous (SCIG) infusion. Immune globulin subcutaneous (human) 20% solution stabilized with glycine (Ig20Gly) is indicated as a replacement therapy for PIDs in adults and children of any age in Europe and in patients aged 2 years and above in the USA. Typically, Ig20Gly is administered using an infusion pump; however, delivery of Ig20Gly by manual administration has recently been approved in Europe. Practical recommendations on the use of Ig20Gly manual administration are lacking; this review therefore aims to provide guidance for use of this method of administration. Additionally, we summarize the infusion parameters, safety, patient-reported outcomes, and economic benefits associated with Ig20Gly manual administration. Manual administration of Ig20Gly was shown to permit faster rates of infusion than administration via infusion pump. Patients typically infused at two or fewer infusion sites with manual administration of Ig20Gly. Safety and tolerability profiles were similar for Ig20Gly manual administration and administration by infusion pump. Overall, there were comparable levels of patient satisfaction with manual administration and infusion pump, with patient preference deemed to be a key determinator of success for either method of administration. Economic studies identified cost savings for the healthcare system through manual administration compared with IVIG or SCIG infusion by infusion pump because of the reduced equipment costs and nurse support. For infusion of Ig20Gly by manual administration, a syringe and butterfly needle are used; patients are advised to start infusion at 1–2 mL/min to prevent discomfort. Overall, manual administration of Ig20Gly offers an effective and well-tolerated alternative to administration by infusion pump.
- Published
- 2024
- Full Text
- View/download PDF
41. A genome-wide association study of adults with community-acquired pneumonia
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Eva Suarez-Pajes, Itahisa Marcelino-Rodriguez, Elisa Hernández Brito, Silvia Gonzalez-Barbuzano, Melody Ramirez-Falcon, Eva Tosco-Herrera, Luis A. Rubio-Rodríguez, María Luisa Briones, Olga Rajas, Luis Borderías, Jose Ferreres, Antoni Payeras, Leonardo Lorente, Javier Aspa, Jose M. Lorenzo Salazar, José Manuel Valencia-Gallardo, Nieves Carbonell, Jorge L. Freixinet, Felipe Rodríguez de Castro, Jordi Solé Violán, Carlos Flores, and Carlos Rodríguez-Gallego
- Subjects
GWAS ,Pneumonia ,Host genetics ,Inborn errors of immunity ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Community-acquired pneumonia (CAP) is associated with high morbidity and hospitalization rate. In infectious diseases, host genetics plays a critical role in susceptibility and immune response, and the immune pathways involved are highly dependent on the microorganism and its route of infection. Here we aimed to identify genetic risk loci for CAP using a case-control genome-wide association study (GWAS). Methods We performed a GWAS on 3,765 Spanish individuals, including 257 adult patients hospitalized with CAP and 3,508 population controls. Pneumococcal CAP was documented in 30% of patients; the remaining 70% were selected among patients with unidentified microbiological etiology. We tested 7,6 million imputed genotypes using logistic regressions. UK Biobank GWAS of bacterial pneumonia were used for results validation. Subsequently, we prioritized genes and likely causal variants based on Bayesian fine mapping and functional evidence. Imputation and association of classical HLA alleles and amino acids were also conducted. Results Six independent sentinel variants reached the genome-wide significance (p
- Published
- 2024
- Full Text
- View/download PDF
42. Class II Transactivator Gene (CIITA) Variants Associated with Bare Lymphocyte Syndrome II in a Female Sudanese Patient
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Salih OAMM, Erwa NHH, Abdelmoneim AH, Fadl HAO, Glanzmann B, Osman MAB, Osman MAH, Gasim TME, and Mustafa A
- Subjects
inborn errors of immunity ,bare lymphocyte syndrome ii ,ciita gene ,compound heterozygote mutation. ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Omaima Abdel Majeed Mohamed Salih,1,2 Nahla Hashim Hassan Erwa,3 Abdelrahman Hamza Abdelmoneim,4 Hiba Awadelkareem Osman Fadl,5,6 Brigitte Glanzmann,7,8 Manasik Abdalla Babiker Osman,9 Monzir Ahmed Hassan Osman,10 Thuraya Mohamed Elshiekh Gasim,10 Alamin Mustafa4 1Departments of Pediatrics, Faculty of Medicine, Omdurman Islamic University, Omdurman, Sudan; 2Pediatric Clinical Immunologist, Tropical Disease Teaching Hospital, Omdurman, Sudan; 3Clinical Immunology Consultant, Faculty of Medicine & Soba University Hospital, University of Khartoum, Khartoum, Sudan; 4Faculty of Medicine, Al-Neelain University, Khartoum, Sudan; 5Department of Hematology, Faculty of Medical Laboratory Sciences, Al-Neelain University, Khartoum, Sudan; 6Senior Medical Laboratory Specialist, Saudi Commission for Health Specialties (SCFHS), Makkah, Kingdom of Saudi Arabia; 7DSI-NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, 7505, South Africa; 8South African Medical Research Council (SAMRC) Genomics Platform, Cape Town, 7505, South Africa; 9Faculty of Medicine, University of Bahri, Khartoum, Sudan; 10Faculty of Medicine and Health Sciences, Omdurman Islamic University, Khartoum, SudanCorrespondence: Alamin Mustafa, Faculty of Medicine, Al-Neelain University, JG37+2RM, 52nd St, Khartoum, Sudan, Email alamin900005@gmail.comIntroduction: Inborn errors of immunity (IEI) are disorders that present a health issue, especially in developing countries where there is a high rate of consanguineous marriages and an increasing rate of diagnosis. One of these disorders is Bare Lymphocyte Syndrome II (BLS II) which is a rare and genetically complex disease that has high morbidity and mortality. The exact genotypic and phenotypic characteristics are still poorly characterized especially in developing countries.Case Presentation: Here, we report the first case of BLS II in a seven-month-old Sudanese female with recurrent chest infections, dermatitis, persistent diarrhea, and failure to thrive. The patient’s all four sisters and three paternal uncles died in early infancy. Laboratory investigations revealed low CD3+, CD4+, and CD8+ lymphocytes, along with normal CD19+ and CD16+ lymphocytes, and low serum IgM and IgA levels. Genetic analysis revealed two CIITA variants; c.2296C >G p. (Pro766Ala) and c.439+1G >A.Conclusion: Further bioinformatics, immunological and clinical workups supported a pathogenic effect of both mutations affecting the function of CIITA protein, and suggesting a compound heterozygote mutation. The patient was started on prophylactic antibiotics and regular intravenous immunoglobulin replacement therapy. The prognosis of this disease is poor in most of the cases, with only a few reported cases surviving until adulthood.Keywords: inborn errors of immunity, bare lymphocyte syndrome II, CIITA gene, compound heterozygote mutation, primary immunodeficiency
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- 2024
43. The Impact of Immunoglobulin Replacement Therapy on Antibiotic Need in Adult Patients with Inborn Errors of Immunity
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Esra Karabiber
- Subjects
bronchiectasis ,immunoglobulin replacement therapy ,inborn errors of immunity ,prophylactic antibiotics ,respiratory infection ,primary immunodeficiency ,Medicine ,Medicine (General) ,R5-920 - Abstract
Aim: Patients with inborn errors of immunity (IEI) have a higher frequency of infections and long-term antibiotic usage. We aimed to assess the effects of immunoglobulin replacement therapy (IgRT) on infection rates, antibiotic usage, and treatment outcomes in patients with IEI. Methods: We retrospectively analyzed demographic data, infection frequency, antibiotic prescriptions, and IgRT in 122 IEI patients between March 2014 and September 2023. Specific IEI diagnoses were made following the European Society for Immunodeficiencies criteria. Results: The median age of patients was 29 years [interquartile range (IQR): 23-40], with 54.1% being male. The median age at diagnosis was 25 years (IQR: 13-36), with a diagnostic delay of 96 months (IQR: 24-180). IgRT was administered to 74.5% of patients, with a median treatment duration of 20 years (IQR: 10-33.5). Antibiotic use was higher in patients receiving IgRT (median: 27, IQR: 16-42) compared to those not on IgRT (median: 14, IQR: 8-22; p
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- 2024
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44. Decoding mutational hotspots in human disease through the gene modules governing thymic regulatory T cells.
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Raposo, Alexandre A. S. F., Rosmaninho, Pedro, Silva, Susana L., Paço, Susana, Brazão, Maria E., Godinho-Santos, Ana, Yumie Tokunaga-Mizoro, Nunes-Cabaço, Helena, Serra-Caetano, Ana, Almeida, Afonso R. M., and Sousa, Ana E.
- Subjects
REGULATORY T cells ,TRANSCRIPTION factors ,GENE regulatory networks ,REGULATOR genes ,WHOLE genome sequencing - Abstract
Computational strategies to extract meaningful biological information from multiomics data are in great demand for effective clinical use, particularly in complex immune-mediated disorders. Regulatory T cells (Tregs) are essential for immune homeostasis and self-tolerance, controlling inflammatory and autoimmune processes in many diseases with a multigenic basis. Here, we quantify the Transcription Factor (TF) differential occupancy landscape to uncover the Gene Regulatory Modules governing lineage-committed Tregs in the human thymus, and show that it can be used as a tool to prioritise variants in complex diseases. We combined RNA-seq and ATAC-seq and generated a matrix of differential TF binding to genes differentially expressed in Tregs, in contrast to their counterpart conventional CD4 single-positive thymocytes. The gene loci of both established and novel genetic interactions uncovered by the Gene Regulatory Modules were significantly enriched in rare variants carried by patients with common variable immunodeficiency, here used as a model of polygenic-based disease with severe inflammatory and autoimmune manifestations. The Gene Regulatory Modules controlling the Treg signature can, therefore, be a valuable resource for variant classification, and to uncover new therapeutic targets. Overall, our strategy can also be applied in other biological processes of interest to decipher mutational hotspots in individual genomes. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
45. Cancer Trends in Inborn Errors of Immunity: A Systematic Review and Meta-Analysis.
- Author
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Fekrvand, Saba, Abolhassani, Hassan, Esfahani, Zahra Hamidi, Fard, Najmeh Nameh Goshay, Amiri, Mahboube, Salehi, Helia, Almasi-Hashiani, Amir, Saeedi-Boroujeni, Ali, Fathi, Nazanin, Mohtashami, Maryam, Razavi, Azadehsadat, Heidari, Arash, Azizi, Gholamreza, Khanmohammadi, Shaghayegh, Ahangarzadeh, Milad, Saleki, Kiarash, Hassanpour, Gholamreza, Rezaei, Nima, and Yazdani, Reza
- Subjects
- *
PRIMARY immunodeficiency diseases , *COMMON variable immunodeficiency , *B cell lymphoma , *FANCONI'S anemia , *HEMATOLOGIC malignancies - Abstract
Background: Patients with inborn errors of immunity (IEI) are susceptible to developing cancer due to defects in the immune system. The prevalence of cancer is higher in IEI patients compared to the immunocompetent population and cancers are considered as an important and common cause of death in IEI patients. Objectives: To systematically review demographic, genetic and cancer-related data of IEI patients with a history of malignancy. Moreover, we performed a meta-analysis aiming to determine the frequency of cancer in patients with different types of IEI. Methods: We conducted electronic searches on Embase, Web of Science, PubMed, and Scopus (until September 2023) introducing terms related to IEI and cancer. Studies with human subjects with confirmed IEI who had developed at least one malignancy during their lifetime were included. Results: A total number of 4607 IEI patients with a cancer history were included in the present study. Common variable immunodeficiency (CVID) had the highest number of reported cases (1284 cases), mainly due to a higher relative proportion of patients with predominantly antibody deficiencies (PAD) and their increased life expectancy contributing to the higher detection and reporting of cancers among these patients. The most common malignancy was hematologic/blood cancers (3026 cases, mainly diffuse large B cell lymphoma). A total number of 1173 cases (55.6%) succumbed to cancer, with the highest rate of bone marrow failure (64.9%). Among the patients with monogenic defects in IEI-associated genes, the majority of cases had ATM deficiency (926 cases), but the highest cancer frequency rate belonged to NBS1 deficiency (50.5%). 1928 cases out of total 4607 eligible cases had detailed data to allow further statistical analysis that revealed BRCA2 deficiency had the earliest cancer development (~ 38 months), lowest cure frequency, and highest fatality rate (85%), while ATM deficiency had the lowest cure frequency and highest fatality rate (72%) among total cases reviewed with exclusion of Fanconi anemia. Conclusion: The overall reported cancer frequency in the cases reviewed with and without exclusion of Fanconi anemia was 11.1% (95% confidence interval: 9.8–12.5%) and 12.0% (95% confidence interval: 10.6–13.5%), respectively. Our study revealed that the incidence of cancer is significantly dependent on the molecular and pathway defects in IEI patients, and individualized early screening and appropriate treatment, might improve the prognosis of these patients. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
46. Microbial Isolates and Antimicrobial Resistance Patterns in Adults with Inborn Errors of Immunity: A Retrospective Longitudinal Analysis of Sputum Cultures.
- Author
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Karabiber, Esra, Ilki, Arzu, Gökdemir, Yasemin, Vatansever, Halime Mualla, Olgun Yıldızeli, Şehnaz, and Ozen, Ahmet
- Subjects
- *
CILIARY motility disorders , *DRUG resistance in bacteria , *DRUG resistance in microorganisms , *ANTIBIOTIC prophylaxis , *CLAVULANIC acid , *SPUTUM examination - Abstract
Individuals with inborn errors of immunity (IEI) are at increased risk of respiratory infection and frequently receive prolonged broad-spectrum antibiotics, leading to antibiotic resistance. The aim of this study was to identify respiratory pathogens and antibiotic resistance patterns in IEI patients.Introduction: We retrospectively studied 36 IEI patients with positive bacterial growth in sputum cultures between 2014 and 2023. Data covered hospitalizations, respiratory infections, yearly antibiotic prescriptions, past sputum cultures, and antibiotic sensitivities. Patients with primary ciliary dyskinesia (PCD) and bronchiectasis served as a control group.Methods: A total of 314 sputum cultures were analyzed from patients with IEI, alongside 585 cultures from individuals with PCD and 113 cultures from patients with bronchiectasis. Patients with IEI had a median age of 23.5 years, with 61% male participants. The study compared the differences in bacterial isolates from sputum cultures and antibiotic resistance between patients with IEI and the control groups. The most common bacterial isolates across all groups wereResults: Haemophilus influenzae (159 isolates in IEI vs. 314 in PCD and 26 in bronchiectasis),Pseudomonas aeruginosa, andStreptococcus pneumoniae. In IEI patients, 992 symptomatic respiratory exacerbations and 43 pneumonia-related hospitalizations were recorded. Notably,H. influenzae in IEI patients showed high resistance rates to cefuroxime (82%), amoxicillin/clavulanic acid (66%), trimethoprim/sulfamethoxazole (59%), and ampicillin/sulbactam (49%).P. aeruginosa in IEI patients displayed significant resistance to ciprofloxacin (85%), ceftazidime (42%), and aminoglycosides (23–33%). Additionally, allS. pneumoniae isolates in IEI patients were tetracycline resistant, with high resistance rates to penicillin, clindamycin, and erythromycin. It is essential to highlight the substantial resistance of common pathogens to oral antibiotics. In contrast, the control groups exhibited lower resistance rates across all bacterial isolates. Antimicrobial resistance is a growing concern among vulnerable IEI patients. We suggest conducting similar investigations in other regions to address this issue. The findings should inform future infection management guidelines for IEIs. [ABSTRACT FROM AUTHOR]Conclusion: - Published
- 2024
- Full Text
- View/download PDF
47. Development of an Expert-Based Scoring System for Early Identification of Patients with Inborn Errors of Immunity in Primary Care Settings – the PIDCAP Project.
- Author
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Rivière, Jacques G., Carot-Sans, Gerard, Piera-Jiménez, Jordi, de la Torre, Sergi, Alsina, Laia, Bielsa Masdeu, Ana Mª, Bosom Diumenjó, Maria, Carbone, Javier, Carreras, Carmen, Deya-Martínez, Angela, Dieli-Crimi, Romina, Espiau, María, Fernández Pereira, Luis, González, I., Juan, Manel, LLobet, Pilar, Martín-Nalda, Andrea, Mendez, Maria, Neth, Olaf, and Ocejo-Vinyals, J. Gonzalo
- Subjects
- *
PRIMARY immunodeficiency diseases , *PRIMARY care , *MEDICAL care costs , *DELAYED diagnosis , *CHILD patients - Abstract
Early diagnosis of inborn errors of immunity (IEIs) has been shown to reduce mortality, morbidity, and healthcare costs. The need for early diagnosis has led to the development of computational tools that trigger earlier clinical suspicion by physicians. Primary care professionals serve as the first line for improving early diagnosis. To this end, a computer-based tool (based on extended Jeffrey Modell Foundation (JMF) Warning Signs) was developed to assist physicians with diagnosis decisions for IEIs in the primary care setting. Two expert-guided scoring systems (one pediatric, one adult) were developed. IEI warning signs were identified and a panel of 36 experts reached a consensus on which signs to include and how they should be weighted. The resulting scoring system was tested against a retrospective registry of patients with confirmed IEI using primary care EHRs. A pilot study to assess the feasibility of implementation in primary care was conducted. The scoring system includes 27 warning signs for pediatric patients and 24 for adults, adding additional clinically relevant criteria established by expert consensus to the JMF Warning Signs. Cytopenias, ≥ 2 systemic infections, recurrent fever and bronchiectasis were the leading warning signs in children, as bronchiectasis, autoimmune diseases, cytopenias, and > 3 pneumonias were in adults. The PIDCAP (Primary Immune Deficiency "Centre d'Atenció Primària" that stands for Primary Care Center in Catalan) tool was implemented in the primary care workstation in a pilot area. The expert-based approach has the potential to lessen under-reporting and minimize diagnostic delays of IEIs. It can be seamlessly integrated into clinical primary care workstations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
48. A genome-wide association study of adults with community-acquired pneumonia.
- Author
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Suarez-Pajes, Eva, Marcelino-Rodriguez, Itahisa, Hernández Brito, Elisa, Gonzalez-Barbuzano, Silvia, Ramirez-Falcon, Melody, Tosco-Herrera, Eva, Rubio-Rodríguez, Luis A., Briones, María Luisa, Rajas, Olga, Borderías, Luis, Ferreres, Jose, Payeras, Antoni, Lorente, Leonardo, Aspa, Javier, Lorenzo Salazar, Jose M., Valencia-Gallardo, José Manuel, Carbonell, Nieves, Freixinet, Jorge L., Rodríguez de Castro, Felipe, and Solé Violán, Jordi
- Subjects
GENOME-wide association studies ,PNEUMOCOCCAL pneumonia ,COMMUNITY-acquired pneumonia ,HAEMOPHILUS influenzae ,CHROMOSOMES - Abstract
Background: Community-acquired pneumonia (CAP) is associated with high morbidity and hospitalization rate. In infectious diseases, host genetics plays a critical role in susceptibility and immune response, and the immune pathways involved are highly dependent on the microorganism and its route of infection. Here we aimed to identify genetic risk loci for CAP using a case-control genome-wide association study (GWAS). Methods: We performed a GWAS on 3,765 Spanish individuals, including 257 adult patients hospitalized with CAP and 3,508 population controls. Pneumococcal CAP was documented in 30% of patients; the remaining 70% were selected among patients with unidentified microbiological etiology. We tested 7,6 million imputed genotypes using logistic regressions. UK Biobank GWAS of bacterial pneumonia were used for results validation. Subsequently, we prioritized genes and likely causal variants based on Bayesian fine mapping and functional evidence. Imputation and association of classical HLA alleles and amino acids were also conducted. Results: Six independent sentinel variants reached the genome-wide significance (p < 5 × 10
-8 ), three on chromosome 6p21.32, and one for each of the chromosomes 4q28.2, 11p12, and 20q11.22. Only one variant at 6p21.32 was validated in independent GWAS of bacterial and pneumococcal pneumonia. Our analyses prioritized C4orf33 on 4q28.2, TAPBP on 6p21.32, and ZNF341 on 20q11.22. Interestingly, genetic defects of TAPBP and ZNF341 are previously known inborn errors of immunity predisposing to bacterial pneumonia, including pneumococcus and Haemophilus influenzae. Associations were all non-significant for the classical HLA alleles. Conclusions: We completed a GWAS of CAP and identified four novel risk loci involved in CAP susceptibility. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
49. Infusion parameters, safety, and practical guidance for the manual administration of subcutaneous immunoglobulin 20% (Ig20Gly).
- Author
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Grosse-Kreul, Dorothea, Allen, Crystal, Kalicinsky, Chrystyna, and Keith, Paul K.
- Subjects
PRIMARY immunodeficiency diseases ,PATIENT satisfaction ,PATIENT preferences ,SEROTHERAPY ,INTRAVENOUS immunoglobulins - Abstract
Primary immunodeficiency diseases (PIDs), also referred to as inborn errors of immunity, constitute a group of genetic conditions that affect the immune system. The current standard of care for patients with PIDs is lifelong immunoglobulin replacement therapy, delivered by intravenous (IVIG) or subcutaneous (SCIG) infusion. Immune globulin subcutaneous (human) 20% solution stabilized with glycine (Ig20Gly) is indicated as a replacement therapy for PIDs in adults and children of any age in Europe and in patients aged 2 years and above in the USA. Typically, Ig20Gly is administered using an infusion pump; however, delivery of Ig20Gly by manual administration has recently been approved in Europe. Practical recommendations on the use of Ig20Gly manual administration are lacking; this review therefore aims to provide guidance for use of this method of administration. Additionally, we summarize the infusion parameters, safety, patient-reported outcomes, and economic benefits associated with Ig20Gly manual administration. Manual administration of Ig20Gly was shown to permit faster rates of infusion than administration via infusion pump. Patients typically infused at two or fewer infusion sites with manual administration of Ig20Gly. Safety and tolerability profiles were similar for Ig20Gly manual administration and administration by infusion pump. Overall, there were comparable levels of patient satisfaction with manual administration and infusion pump, with patient preference deemed to be a key determinator of success for either method of administration. Economic studies identified cost savings for the healthcare system through manual administration compared with IVIG or SCIG infusion by infusion pump because of the reduced equipment costs and nurse support. For infusion of Ig20Gly by manual administration, a syringe and butterfly needle are used; patients are advised to start infusion at 1–2 mL/min to prevent discomfort. Overall, manual administration of Ig20Gly offers an effective and well-tolerated alternative to administration by infusion pump. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
50. Síndrome de DiGeorge con deleción 22q11.2 en un paciente de etnia Rarámuri.
- Author
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Alelí Casillas-Ituarte, Aleida, Elvira Peña-Varela, Claudia, Antonio Yamazaki-Nakashimada, Marco, and Berenise Gámez-González, Luisa
- Subjects
- *
22Q11 deletion syndrome , *DIGEORGE syndrome , *NEURAL development , *VELOCARDIOFACIAL syndrome , *CONGENITAL heart disease - Abstract
Background: 22q11 deletion syndrome consists of a variable grouping of phenotypic features and immunological defects secondary to the loss of genetic material located in the 22q11.2 band. The 22q11 deletion spectrum encompasses different syndromes related to the same etiology and with overlapping anomalies, including DiGeorge syndrome, velocardiofacial syndrome, among others. Case report: A 6-month-old male patient of indigenous Rarámuri ethnicity was referred to the Children's Specialty Hospital of Chihuahua due to severe malnutrition and respiratory distress. Upon admission, a grade V/VI holosystolic murmur and global neurodevelopmental delay were detected. He required endotracheal intubation and was admitted to the Pediatric Intensive Care Unit, where he had a long hospital stay. Some type of inborn error of immunity was suspected due to infectious processes, congenital heart disease, and evidence of facial dysmorphisms (malar hypoplasia, narrow palpebral fissures, tubular-like nose, and small mouth with high-arched palate), in addition to DiGeorge syndrome. Conclusions: 22q11 deletion syndrome causes heterogeneous clinical manifestations, including multiple cardiac abnormalities and chronic diseases. In the Rarámuri population, there are currently no reports of this type of inborn error of immunity, so our patient exemplifies the need to intentionally search for these disorders, especially in those with severe infections, heart disease, and distinctive morphological characteristics. Disease detection programs are necessary, particularly in vulnerable populations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
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