162 results on '"Jacek Krzywinski"'
Search Results
2. Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging
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Ida V. Lundholm, Jonas A. Sellberg, Tomas Ekeberg, Max F. Hantke, Kenta Okamoto, Gijs van der Schot, Jakob Andreasson, Anton Barty, Johan Bielecki, Petr Bruza, Max Bucher, Sebastian Carron, Benedikt J. Daurer, Ken Ferguson, Dirk Hasse, Jacek Krzywinski, Daniel S. D. Larsson, Andrew Morgan, Kerstin Mühlig, Maria Müller, Carl Nettelblad, Alberto Pietrini, Hemanth K. N. Reddy, Daniela Rupp, Mario Sauppe, Marvin Seibert, Martin Svenda, Michelle Swiggers, Nicusor Timneanu, Anatoli Ulmer, Daniel Westphal, Garth Williams, Alessandro Zani, Gyula Faigel, Henry N. Chapman, Thomas Möller, Christoph Bostedt, Janos Hajdu, Tais Gorkhover, and Filipe R. N. C. Maia
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XFELs ,Melbournevirus ,coherent diffractive imaging ,LCLS ,image reconstruction ,Crystallography ,QD901-999 - Abstract
Diffraction before destruction using X-ray free-electron lasers (XFELs) has the potential to determine radiation-damage-free structures without the need for crystallization. This article presents the three-dimensional reconstruction of the Melbournevirus from single-particle X-ray diffraction patterns collected at the LINAC Coherent Light Source (LCLS) as well as reconstructions from simulated data exploring the consequences of different kinds of experimental sources of noise. The reconstruction from experimental data suffers from a strong artifact in the center of the particle. This could be reproduced with simulated data by adding experimental background to the diffraction patterns. In those simulations, the relative density of the artifact increases linearly with background strength. This suggests that the artifact originates from the Fourier transform of the relatively flat background, concentrating all power in a central feature of limited extent. We support these findings by significantly reducing the artifact through background removal before the phase-retrieval step. Large amounts of blurring in the diffraction patterns were also found to introduce diffuse artifacts, which could easily be mistaken as biologically relevant features. Other sources of noise such as sample heterogeneity and variation of pulse energy did not significantly degrade the quality of the reconstructions. Larger data volumes, made possible by the recent inauguration of high repetition-rate XFELs, allow for increased signal-to-background ratio and provide a way to minimize these artifacts. The anticipated development of three-dimensional Fourier-volume-assembly algorithms which are background aware is an alternative and complementary solution, which maximizes the use of data.
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- 2018
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3. Soft x-ray absorption spectroscopy of metalloproteins and high-valent metal-complexes at room temperature using free-electron lasers
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Markus Kubin, Jan Kern, Sheraz Gul, Thomas Kroll, Ruchira Chatterjee, Heike Löchel, Franklin D. Fuller, Raymond G. Sierra, Wilson Quevedo, Christian Weniger, Jens Rehanek, Anatoly Firsov, Hartawan Laksmono, Clemens Weninger, Roberto Alonso-Mori, Dennis L. Nordlund, Benedikt Lassalle-Kaiser, James M. Glownia, Jacek Krzywinski, Stefan Moeller, Joshua J. Turner, Michael P. Minitti, Georgi L. Dakovski, Sergey Koroidov, Anurag Kawde, Jacob S. Kanady, Emily Y. Tsui, Sandy Suseno, Zhiji Han, Ethan Hill, Taketo Taguchi, Andrew S. Borovik, Theodor Agapie, Johannes Messinger, Alexei Erko, Alexander Föhlisch, Uwe Bergmann, Rolf Mitzner, Vittal K. Yachandra, Junko Yano, and Philippe Wernet
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Crystallography ,QD901-999 - Abstract
X-ray absorption spectroscopy at the L-edge of 3d transition metals provides unique information on the local metal charge and spin states by directly probing 3d-derived molecular orbitals through 2p-3d transitions. However, this soft x-ray technique has been rarely used at synchrotron facilities for mechanistic studies of metalloenzymes due to the difficulties of x-ray-induced sample damage and strong background signals from light elements that can dominate the low metal signal. Here, we combine femtosecond soft x-ray pulses from a free-electron laser with a novel x-ray fluorescence-yield spectrometer to overcome these difficulties. We present L-edge absorption spectra of inorganic high-valent Mn complexes (Mn ∼ 6–15 mmol/l) with no visible effects of radiation damage. We also present the first L-edge absorption spectra of the oxygen evolving complex (Mn4CaO5) in Photosystem II (Mn
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- 2017
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4. Experimental observations of seed growth and accompanying pedestal contamination in a self-seeded, soft x-ray free-electron laser
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Gabriel Marcus, William M. Fawley, Dorian Bohler, Yuantao Ding, Yiping Feng, Erik Hemsing, Zhirong Huang, Jacek Krzywinski, Alberto Lutman, and Daniel Ratner
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Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Measurements of the soft x-ray, self-seeding spectrum at the Linac Coherent Light Source (LCLS) free-electron laser generally display a pedestal-like distribution around the central seeded wavelength. This pedestal limits the spectral purity and can negatively affect some user applications not employing a post-undulator monochromator. In this paper, we investigate the detailed experimental characteristics of both the amplified seed and its accompanying pedestal using data from a number of separate LCLS shifts over the 2015-2018 time period. We find that the amplified seed shows excellent wavelength stability and an exponential growth rate whose dependence upon energy detuning is consistent with theory. The pedestal’s spectral distribution and integrated strength vary strongly shot by shot, independent of electron beam energy jitter. Its shot-averaged strength relative to that of the seed grows at least linearly with z and can approach values of 15% or more. The pedestal is comprised of two separate components: (1) normal self-amplified spontaneous emission (SASE) whose total strength is nominally insensitive to energy detuning and laser heater (LH) strength; (2) sideband-like emission whose strength positively correlates with that of the amplified seed and negatively with energy detuning and LH strength. We believe this latter, non-SASE component arises from comparatively long wavelength (i.e., λ∼0.3–3 μm) amplitude and phase modulations of the main seeded radiation line. Its shot to shot variability and LH sensitivity suggests an origin connected to growth of the longitudinal microbunching instability on the electron beam.
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- 2019
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5. Microbunch Rotation and Coherent Undulator Radiation from a Kicked Electron Beam
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James P. MacArthur, Alberto A. Lutman, Jacek Krzywinski, and Zhirong Huang
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Physics ,QC1-999 - Abstract
Coherent emission from a microbunched electron beam is the driving force behind the revolution in light sources, enabling x-ray free-electron lasers (FELs) to emit pulses 9 orders of magnitude brighter than previous sources. Microbunches form perpendicular to the electron travel direction, and the conventional understanding is that they shear rather than rotate in response to a transverse kick, locking FEL facilities into a single-user operating mode. In this paper, we show that microbunches rotate toward the new direction of travel if the electron beam is kicked and defocused. We provide evidence that microbunch rotation explains the unexpectedly large amount of off-axis radiation observed during experiments at the Linac Coherent Light Source. We demonstrate that LCLS can be multiplexed into at least three separate beams using this principle. Finally, we propose using a magnetic triplet to rotate microbunches through significantly larger angles without microbunch degradation. This new understanding of microbunch dynamics can lead to significantly improved multiplexing at FEL facilities, microbunch preservation through a bend, and x-ray pulses with a pulse-front tilt.
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- 2018
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6. Microbunching-instability-induced sidebands in a seeded free-electron laser
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Zhen Zhang, Ryan Lindberg, William M. Fawley, Zhirong Huang, Jacek Krzywinski, Alberto Lutman, Gabriel Marcus, and Agostino Marinelli
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Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Measurements of the multishot-averaged, soft x-ray, self-seeding spectrum at the LCLS free-electron laser often have a pedestal-like distribution around the seeded wavelength, which limits the spectral purity and can negatively affect some user applications not employing a post-undulator monochromator. In this paper, we study the origins of such pedestals, focusing on longitudinal phase space modulations produced by the microbunching instability upstream of the free-electron laser (FEL) undulator. We show from theory and numerical simulation that both energy and density modulations can induce sidebands in a high-gain, seeded FEL whose fractional strength typically grows as the square of the undulator length. The results place a tight constraint on the longitudinal phase space uniformity of the electron beam for a seeded FEL, possibly requiring the amplitude of long-wavelength modulations to be much smaller than the typical incoherent energy spread if the output sideband power is to remain only a couple percent or less of the amplified seed power.
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- 2016
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7. Soft x-ray self-seeding simulation methods and their application for the Linac Coherent Light Source
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Svitozar Serkez, Jacek Krzywinski, Yuantao Ding, and Zhirong Huang
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Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Self-seeding is a promising approach to significantly narrow the self-amplified spontaneous emission bandwidth of X-ray free-electron lasers (FELs) and hence to produce nearly transform-limited pulses. We study the radiation propagation through a grating monochromator installed at the Linac Coherent Light Source (LCLS). The monochromator design is based on a toroidal VLS grating working at a fixed incidence angle mounting without an entrance slit. It covers the spectral range from 500 eV to 1000 eV. The optical system was studied using a wave optics method to evaluate the performance of the self-seeding scheme. Our wave optics analysis takes into account the finite size of the coherent source, third-order aberrations and height error of the optical elements. Two propagation approaches are studied with time-dependent FEL simulations. In addition, the pulse-front tilt phenomenon effect is illustrated.
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- 2015
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8. Time-dependent dynamical Bragg diffraction in deformed crystals by the beam propagation method
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Jacek Krzywinski and Aliaksei Halavanau
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Inorganic Chemistry ,Structural Biology ,General Materials Science ,Physical and Theoretical Chemistry ,Condensed Matter Physics ,Biochemistry - Abstract
This paper describes how to efficiently solve time-dependent X-ray dynamic diffraction problems in distorted crystals with a fast Fourier transform based beam propagation method. Examples are given of using the technique to simulate the propagation of X-ray beams in deformed crystals in space and time domains relevant to the cavity-based X-ray free-electron lasers and X-ray free-electron laser self-seeding systems.
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- 2022
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9. 9.7 Permanent magnets
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Martin Grönefeld, Iulian Teliban, and Jacek Krzywinski
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- 2022
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10. A simple method for a very short X-ray pulse production and attosecond diagnostic at LCLS
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Franz-Josef Decker, Michael Sullivan, Patrick Krejcik, Axel Brachmann, Alan Fisher, William Colocho, T. Maxwell, Jacek Krzywinski, Alexander Novokhatski, Marc W. Guetg, Richard Iverson, Dorian Bohler, and Alberto Lutman
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Physics ,Nuclear and High Energy Physics ,010308 nuclear & particles physics ,business.industry ,Attosecond ,Resolution (electron density) ,X-ray ,01 natural sciences ,Pulse (physics) ,Transverse plane ,Optics ,0103 physical sciences ,010306 general physics ,business ,Instrumentation - Abstract
We discuss how by using the wake fields generating in a corrugating plate we may increase the resolution of a transverse diagnostic cavity while producing an extremely short X-ray pulse at LCLS.
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- 2019
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11. Refractive Guide Switching a Regenerative Amplifier Free-Electron Laser for High Peak and Average Power Hard X Rays
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Rachel Margraf, Zhirong Huang, Tor Raubenheimer, Alex Halavanau, Gabriel Marcus, Diling Zhu, Jacek Krzywinski, and James P. MacArthur
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Brightness ,Materials science ,business.industry ,Free-electron laser ,Physics::Optics ,General Physics and Astronomy ,Context (language use) ,Undulator ,Radiation ,Laser ,01 natural sciences ,law.invention ,Optics ,Orders of magnitude (time) ,law ,0103 physical sciences ,Physics::Accelerator Physics ,Spontaneous emission ,010306 general physics ,business - Abstract
We present an x-ray regenerative amplifier free-electron laser design capable of producing fully coherent hard x-ray pulses across a broad tuning range at a high steady state repetition rate. The scheme leverages a strong undulator taper and an apertured diamond output-coupling cavity crystal to produce both high peak and average spectral brightness radiation that is 2 to 3 orders of magnitude greater than conventional single-pass self-amplified spontaneous emission free-electron laser amplifiers. Refractive guiding in the postsaturation regime is found to play a key role in passively controlling the stored cavity power. The scheme is explored both analytically and numerically in the context of the Linac Coherent Light Source II High Energy upgrade.
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- 2020
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12. Subthreshold Erosion of an Organic Polymer Induced by Multiple Shots of an X-Ray Free-Electron Laser
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Jaromír Chalupský, Stefan P. Hau-Riege, Svea Kreis, Jacek Krzywinski, M. Toufarová, A. Graf, Marc Messerschmidt, Stefan Moeller, Věra Hájková, Thierry Auguste, K. Tiedtke, Christoph Bostedt, Ryszard Sobierajski, S. Guizard, John D. Bozek, Hamed Merdji, Libor Juha, B. Carré, U. Jastrow, M. De Grazia, Tomáš Burian, Vladimír Vorlíček, Nikita Medvedev, Richard A. London, Laboratoire Interactions, Dynamiques et Lasers (ex SPAM) (LIDyl), Université Paris-Saclay-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Attophysique (ATTO), Institut Rayonnement Matière de Saclay (IRAMIS), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Laboratoire Interactions, Dynamiques et Lasers (ex SPAM) (LIDyl), Université Paris-Saclay-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Biomolécules Excitées (DICO), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), and Dynamique et Interactions en phase Condensée (DICO)
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[PHYS]Physics [physics] ,Materials science ,Photon ,Free-electron laser ,General Physics and Astronomy ,Synchrotron radiation ,02 engineering and technology ,Photon energy ,Radiation ,021001 nanoscience & nanotechnology ,01 natural sciences ,Fluence ,[PHYS.MECA.MEMA]Physics [physics]/Mechanics [physics]/Mechanics of materials [physics.class-ph] ,Extreme ultraviolet ,0103 physical sciences ,ddc:530 ,Irradiation ,Atomic physics ,010306 general physics ,0210 nano-technology - Abstract
Physical review applied 14(3), 034057 (2020). doi:10.1103/PhysRevApplied.14.034057, Solids irradiated by energetic photons can be eroded in two modes, depending on the radiation intensity. High average, low-peak power sources, e.g., synchrotron radiation and high-order harmonics, induce desorption of the material at a low etch rate. In contrast, high-peak-power radiation from extreme ultraviolet and x-ray lasers usually causes a massive removal of the material even by a single shot. In this contribution, an effective material erosion is reported in PMMA exposed to multiple accumulated pulses generated by the free-electron x-ray-laser Linac Coherent Light Source (LCLS, tuned at a photon energy of 830 eV in this study, operated in Menlo Park at Stanford, CA, USA) at a fluence below the single-pulse ablation threshold. The effect is caused by polymer-chain scissions initiated by single photons carrying enough energy to break the C$—$C bounds. High efficiency of the erosion is supposed to occur due to a correlation of the single-photon effects. The subthreshold damage exhibits a nonlinear dose dependence resulting from a competition between chain scissions and cross-linking processes. The cross-linking is proven by Raman spectroscopy of the irradiated polymer. Two theoretical models of the x-ray free-electron-laser-induced erosion are suggested, which provide an excellent agreement with the experimental results., Published by American Physical Society, College Park, Md. [u.a.]
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- 2020
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13. Solving x-ray dynamic difraction problems with beam propagation method
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Jacek Krzywinski
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Diffraction ,Crystal ,Materials science ,Optics ,Beam propagation method ,Scattering ,business.industry ,Emphasis (telecommunications) ,X-ray ,Physics::Optics ,business ,Focus (optics) ,Diffraction grating - Abstract
This presentation will focus on solving certain x-ray dynamic diffraction problems using a beam propagation method (BPM). I will show examples of using the BPM method in: 1) simulating performance of non-perfect multilayer mirrors and focusing optics, such as multilayer Laue lenses (MML), 2) predicting damage thresholds of diffraction elements such as diffraction gratings, 3) modeling scattering of x-rays form deformed crystal. A special emphasis will be placed on including imperfection and thermal deformation in simulations of performance of x-ray optical elements. Some of simulation results will be related to experimental data. I will also compare the BPM method with other approaches to theory of x-ray dynamic diffraction.
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- 2020
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14. Author Correction: Nanofocusing of hard X-ray free electron laser pulses using diamond based Fresnel zone plates
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David Fritz, Vitaliy A. Guzenko, Mikko Ritala, Christian David, Sergey Gorelick, Elina Färm, Jacek Krzywinski, Ray Barrett, Joan Vila-Comamala, Liubov Samoylova, Harald Sinn, Jan Grünert, Oliver Bunk, Simon Rutishauser, and Marco Cammarata
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Multidisciplinary ,Fresnel zone ,Materials science ,business.industry ,lcsh:R ,X-ray ,Free-electron laser ,Diamond ,lcsh:Medicine ,engineering.material ,Optics ,engineering ,lcsh:Q ,business ,lcsh:Science ,Author Correction - Abstract
A growing number of X-ray sources based on the free-electron laser (XFEL) principle are presently under construction or have recently started operation. The intense, ultrashort pulses of these sources will enable new insights in many different fields of science. A key problem is to provide x-ray optical elements capable of collecting the largest possible fraction of the radiation and to focus into the smallest possible focus. As a key step towards this goal, we demonstrate here the first nanofocusing of hard XFEL pulses. We developed diamond based Fresnel zone plates capable of withstanding the full beam of the world's most powerful x-ray laser. Using an imprint technique, we measured the focal spot size, which was limited to 320 nm FWHM by the spectral band width of the source. A peak power density in the focal spot of 4×10(17)W/cm(2) was obtained at 70 fs pulse length.
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- 2020
15. Experimental observations of seed growth and accompanying pedestal contamination in a self-seeded, soft x-ray free-electron laser
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Erik Hemsing, Daniel Ratner, Alberto Lutman, Yuantao Ding, Yiping Feng, Gabriel Marcus, W. M. Fawley, Dorian Bohler, Zhirong Huang, and Jacek Krzywinski
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Physics ,Nuclear and High Energy Physics ,Physics and Astronomy (miscellaneous) ,010308 nuclear & particles physics ,Phase (waves) ,Free-electron laser ,Surfaces and Interfaces ,Laser ,01 natural sciences ,law.invention ,Wavelength ,Pedestal ,law ,0103 physical sciences ,Physics::Accelerator Physics ,lcsh:QC770-798 ,Spontaneous emission ,lcsh:Nuclear and particle physics. Atomic energy. Radioactivity ,Atomic physics ,010306 general physics ,Energy (signal processing) ,Spectral purity - Abstract
Measurements of the soft x-ray, self-seeding spectrum at the Linac Coherent Light Source (LCLS) free-electron laser generally display a pedestal-like distribution around the central seeded wavelength. This pedestal limits the spectral purity and can negatively affect some user applications not employing a post-undulator monochromator. In this paper, we investigate the detailed experimental characteristics of both the amplified seed and its accompanying pedestal using data from a number of separate LCLS shifts over the 2015-2018 time period. We find that the amplified seed shows excellent wavelength stability and an exponential growth rate whose dependence upon energy detuning is consistent with theory. The pedestal's spectral distribution and integrated strength vary strongly shot by shot, independent of electron beam energy jitter. Its shot-averaged strength relative to that of the seed grows at least linearly with $z$ and can approach values of 15% or more. The pedestal is comprised of two separate components: (1) normal self-amplified spontaneous emission (SASE) whose total strength is nominally insensitive to energy detuning and laser heater (LH) strength; (2) sideband-like emission whose strength positively correlates with that of the amplified seed and negatively with energy detuning and LH strength. We believe this latter, non-SASE component arises from comparatively long wavelength (i.e., $\ensuremath{\lambda}\ensuremath{\sim}0.3--3\text{ }\text{ }\ensuremath{\mu}\mathrm{m}$) amplitude and phase modulations of the main seeded radiation line. Its shot to shot variability and LH sensitivity suggests an origin connected to growth of the longitudinal microbunching instability on the electron beam.
- Published
- 2019
16. Nanofocus characterization at the Coherent X-ray Imaging instrument using 2D single grating interferometry
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Frank Seiboth, Sergio Carbajo, Matthew Seaberg, Anne Sakdinawat, Hae Ja Lee, Mengning Liang, Andrew Aquila, Riccardo Signorato, M. Makita, Sébastien Boutet, Yanwei Liu, Jacek Krzywinski, Diling Zhu, Yiping Feng, Bob Nagler, and Yanwen Sun
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Physics ,business.industry ,X-ray ,Wavefront sensor ,Grating ,Astigmatism ,medicine.disease ,Linear particle accelerator ,Characterization (materials science) ,Optics ,medicine ,business ,Focus (optics) ,Beam (structure) - Abstract
In this work we present the application of a 2D single grating wavefront sensor to align and characterize the 100 nm focus at the Coherent X-ray Imaging (CXI) endstation at the Linac Coherent Light Source (LCLS). The results agree well with a model of the system, indicating that the mirrors perform as designed when alignment is optimized. In addition, a comparison with the imprint technique confirms the validity of the results, which showed that wavefront-based alignment resulted in negligible astigmatism. Analysis of the retrieved focus profile indicates that intensities
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- 2019
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17. Laser power meters as portable x-ray power monitors
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Philip Heimann, J. Welch, Dennis Nordlund, Stefan Moeller, David Fritz, Peter Walter, Alexander H. Reid, Jacek Krzywinski, and Peter Stefan
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Materials science ,Physics::Instrumentation and Detectors ,business.industry ,Detector ,Astrophysics::Instrumentation and Methods for Astrophysics ,Synchrotron radiation ,Power (physics) ,Responsivity ,Optics ,Beamline ,Electricity meter ,Calibration ,Physics::Accelerator Physics ,Laser power scaling ,business - Abstract
For the LCLS-II X-ray instruments, we have developed laser power meters as compact X-ray power monitors. A calibration of the responsivity of the power meters was carried out against a silicon photodiode with synchrotron radiation and a gas monitor detector with FEL X-rays. A manipulator with two power meters was installed in various locations at the LCLS. In the LCLS front end, the power meters were compared with the gas detectors, which are calibrated by the electron energy loss method. The agreement between the power meters and the gas detectors was better than 20% at 1500 eV with the pulse energy measured by the gas detectors higher than that from the power meters. In the AMO instrument, the power meters evaluated the improvement in beamline transmission caused by the oxygen plasma cleaning of the Kirkpatrick-Baez mirrors. Measurements were also conducted one and two years later to observe the effect of further contamination of the optical surfaces. Finally at the SXR instrument, the power meters determined the pulse energy at the sample for a beamtime, where the X-ray intensity was an important parameter.
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- 2019
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18. Tunable Isolated Attosecond X-ray Pulses with Gigawatt Peak Power from a Free-Electron Laser
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Joseph Duris, Siqi Li, Taran Driver, Elio G. Champenois, James P. MacArthur, Alberto A. Lutman, Zhen Zhang, Philipp Rosenberger, Jeff W. Aldrich, Ryan Coffee, Giacomo Coslovich, Franz-Josef Decker, James M. Glownia, Gregor Hartmann, Wolfram Helml, Andrei Kamalov, Jonas Knurr, Jacek Krzywinski, Ming-Fu Lin, Jon P. Marangos, Megan Nantel, Adi Natan, Jordan T. O’Neal, Niranjan Shivaram, Peter Walter, Anna Li Wang, James J. Welch, Thomas J. A. Wolf, Joseph Z. Xu, Matthias F. Kling, Philip H. Bucksbaum, Alexander Zholents, Zhirong Huang, James P. Cryan, Agostino Marinelli, and Engineering and Physical Sciences Research Council
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DYNAMICS ,Accelerator Physics (physics.acc-ph) ,Materials science ,REGIME ,Attosecond ,Astrophysics::High Energy Astrophysical Phenomena ,FOS: Physical sciences ,02 engineering and technology ,Electron ,Photon energy ,01 natural sciences ,law.invention ,Physics, Applied ,010309 optics ,Optics ,law ,0103 physical sciences ,PUMP-PROBE EXPERIMENTS ,01 Mathematical Sciences ,Science & Technology ,SPECTROSCOPY ,02 Physical Sciences ,NONLINEAR OPTICS ,business.industry ,Physics ,Free-electron laser ,Pulse duration ,FEMTOSECOND ,021001 nanoscience & nanotechnology ,Laser ,Atomic and Molecular Physics, and Optics ,Electronic, Optical and Magnetic Materials ,Optoelectronics & Photonics ,Orders of magnitude (time) ,Physical Sciences ,OPERATION ,Physics - Accelerator Physics ,0210 nano-technology ,business ,Ultrashort pulse ,Physics - Optics ,Optics (physics.optics) - Abstract
The quantum mechanical motion of electrons in molecules and solids occurs on the sub-femtosecond timescale. Consequently, the study of ultrafast electronic phenomena requires thegeneration of laser pulses shorter than 1 fs and of sufficient intensity to interact with their targetwith high probability. Probing these dynamics with atomic-site specificity requires the extensionof sub-femtosecond pulses to the soft X-ray spectral region. Here we report the generation of iso-lated soft X-ray attosecond pulses with an X-ray free-electron laser. Our source has a pulse energythat is a million times larger than any other source of isolated attosecond pulses in the soft X-rayspectral region, with a peak power exceeding 100 GW. This unique combination of high intensity,high photon energy and short pulse duration enables the investigation of electron dynamics withX-ray non-linear spectroscopy and single-particle imaging, unlocking a path towards a new era ofattosecond science.
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- 2019
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19. Laguerre-Gaussian Mode Laser Heater for Microbunching Instability Suppression in Free Electron Lasers
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Jingyi Tang, Wei Liu, Randy Lemons, Sharon Vetter, Timothy Maxwell, Franz-Josef Decker, Alberto Lutman, Jacek Krzywinski, Gabriel Marcus, Stefan Moeller, Daniel Ratner, Zhirong Huang, and Sergio Carbajo
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- 2019
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20. Megahertz-compatible angular streaking with few-femtosecond resolution at x-ray free-electron lasers
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Gregor Hartmann, Stefan Moeller, Marcus Ossiander, Nick Hartmann, Jacek Krzywinski, Wolfram Helml, Thomas Feurer, Reinhard Kienberger, R. Coffee, Joseph Robinson, Jia Liu, Rupert Heider, Marc Planas, Jens Viefhaus, Jan Grünert, A. Miahnahri, Anders Lindahl, Martin S. Wagner, V. Shirvanyan, Alberto Lutman, Jens Buck, Markus Ilchen, and T. Maxwell
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Physics ,business.industry ,Attosecond ,chemistry.chemical_element ,Laser ,01 natural sciences ,Streaking ,ddc ,010305 fluids & plasmas ,Pulse (physics) ,law.invention ,Neon ,Optics ,chemistry ,law ,0103 physical sciences ,Femtosecond ,Spontaneous emission ,ddc:530 ,010306 general physics ,business ,Ultrashort pulse - Abstract
Physical review / A covering atomic, molecular, and optical physics and quantum information 100(5), 053420 (2019). doi:10.1103/PhysRevA.100.053420, Highly brilliant, coherent, femtosecond x-ray pulses delivered by free-electron lasers (FELs) constitute oneof the pillars of modern ultrafast science. Next generation FEL facilities provide up to megahertz repetitionrates and pulse durations down to the attosecond regime utilizing self-amplification of spontaneous emission.However, the stochastic nature of this generation mechanism demands single-shot pulse characterization toperform meaningful experiments. Here we demonstrate a fast yet robust online analysis technique capableof megahertz-rate mapping of the temporal intensity structure and arrival time of x-ray FEL pulses withfew-femtosecond resolution. We performed angular streaking measurements of both neon photo- and Augerelectrons and show their applicability for a direct time-domain feedback system during ongoing experiments.The fidelity of the real-time pulse characterization algorithm is corroborated by resolving isolated x-ray pulsesand double pulse trains with few-femtosecond substructure, thus paving the way for x-ray-pump–x-ray-probeFEL science at repetition rates compatible with the demands of LCLS-II and European XFEL., Published by Inst., Woodbury, NY
- Published
- 2019
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21. Filamentation effect in a gas attenuator for high-repetition-rate X-ray FELs
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Eliazar Ortiz, Michael Rowen, Jacek Krzywinski, Donald W. Schafer, Yiping Feng, and Tor Raubenheimer
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0301 basic medicine ,Attenuator (electronics) ,030103 biophysics ,Nuclear and High Energy Physics ,Radiation ,Chemistry ,business.industry ,Attenuation ,X-ray ,Thermal diffusivity ,Laser ,Ideal gas ,law.invention ,03 medical and health sciences ,Optics ,Filamentation ,law ,Femtosecond ,business ,Instrumentation - Abstract
A sustained filamentation or density depression phenomenon in an argon gas attenuator servicing a high-repetition femtosecond X-ray free-electron laser has been studied using a finite-difference method applied to the thermal diffusion equation for an ideal gas. A steady-state solution was obtained by assuming continuous-wave input of an equivalent time-averaged beam power and that the pressure of the entire gas volume has reached equilibrium. Both radial and axial temperature/density gradients were found and describable as filamentation or density depression previously reported for a femtosecond optical laser of similar attributes. The effect exhibits complex dependence on the input power, the desired attenuation, and the geometries of the beam and the attenuator. Time-dependent simulations were carried out to further elucidate the evolution of the temperature/density gradients in between pulses, from which the actual attenuation received by any given pulse can be properly calculated.
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- 2016
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22. Atom-specific activation in CO oxidation
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Jonas A. Sellberg, Giacomo Coslovich, Elias Diesen, Kess Marks, Jacek Krzywinski, Dennis Nordlund, Henrik Öström, Filippo Cavalca, Ryan Coffee, Alberto Lutman, Alexander H. Reid, Jerry LaRue, André Eilert, Fivos Perakis, Anders Nilsson, Simon Schreck, Kyung Hwan Kim, Matthew Weston, Lars G. M. Pettersson, Hirohito Ogasawara, Stefan Moeller, and Martin Beye
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X-ray spectroscopy ,Materials science ,Astrophysics::High Energy Astrophysical Phenomena ,General Physics and Astronomy ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Chemical reaction ,Molecular physics ,Oxygen ,chemistry ,0103 physical sciences ,Femtosecond ,Atom ,Density functional theory ,ddc:530 ,Physical and Theoretical Chemistry ,010306 general physics ,0210 nano-technology ,Spectroscopy ,Excitation - Abstract
The journal of chemical physics 149(23), 234707 (2018). doi:10.1063/1.5044579, We report on atom-specific activation of CO oxidation on Ru(0001) via resonant X-ray excitation. We show that resonant 1s core-level excitation of atomically adsorbed oxygen in the co-adsorbed phase of CO and oxygen directly drives CO oxidation. We separate this direct resonant channel from indirectly driven oxidation via X-ray induced substrate heating. Based on density functional theory calculations, we identify the valence-excited state created by the Auger decay as the driving electronic state for direct CO oxidation. We utilized the fresh-slice multi-pulse mode at the Linac Coherent Light Source that provided time-overlapped and 30 fs delayed pairs of soft X-ray pulses and discuss the prospects of femtosecond X-ray pump X-ray spectroscopy probe, as well as X-ray two-pulse correlation measurements for fundamental investigations of chemical reactions via selective X-ray excitation., Published by American Institute of Physics, Melville, NY
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- 2018
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23. Microbunch Rotation and Coherent Undulator Radiation from a Kicked Electron Beam
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Jacek Krzywinski, Zhirong Huang, James P. MacArthur, and Alberto Lutman
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Physics ,Thesaurus (information retrieval) ,010308 nuclear & particles physics ,business.industry ,QC1-999 ,General Physics and Astronomy ,Undulator ,Radiation ,Rotation ,01 natural sciences ,Optics ,0103 physical sciences ,Cathode ray ,Physics::Accelerator Physics ,010306 general physics ,business - Abstract
Coherent emission from a microbunched electron beam is the driving force behind the revolution in light sources, enabling x-ray free-electron lasers (FELs) to emit pulses 9 orders of magnitude brighter than previous sources. Microbunches form perpendicular to the electron travel direction, and the conventional understanding is that they shear rather than rotate in response to a transverse kick, locking FEL facilities into a single-user operating mode. In this paper, we show that microbunches rotate toward the new direction of travel if the electron beam is kicked and defocused. We provide evidence that microbunch rotation explains the unexpectedly large amount of off-axis radiation observed during experiments at the Linac Coherent Light Source. We demonstrate that LCLS can be multiplexed into at least three separate beams using this principle. Finally, we propose using a magnetic triplet to rotate microbunches through significantly larger angles without microbunch degradation. This new understanding of microbunch dynamics can lead to significantly improved multiplexing at FEL facilities, microbunch preservation through a bend, and x-ray pulses with a pulse-front tilt.
- Published
- 2018
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24. High-Power Femtosecond Soft X Rays from Fresh-Slice Multistage Free-Electron Lasers
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T. Maxwell, James P. MacArthur, Yuantao Ding, Claudio Emma, Marc W. Guetg, Alberto Lutman, Zhirong Huang, Jacek Krzywinski, and Agostino Marinelli
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Free electron model ,Materials science ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,General Physics and Astronomy ,02 engineering and technology ,Electron ,Pulsed power ,Undulator ,021001 nanoscience & nanotechnology ,Laser ,01 natural sciences ,Electromagnetic radiation ,law.invention ,Pulse (physics) ,Optics ,law ,0103 physical sciences ,Femtosecond ,010306 general physics ,0210 nano-technology ,business - Abstract
We demonstrate a novel multistage amplification scheme for self-amplified spontaneous-emission free electron lasers for the production of few femtosecond pulses with very high power in the soft x-ray regime. The scheme uses the fresh-slice technique to produce an x-ray pulse on the bunch tail, subsequently amplified in downstream undulator sections by fresh electrons. With three-stages amplification, x-ray pulses with an energy of hundreds of microjoules are produced in few femtoseconds. For single-spike spectra x-ray pulses the pulse power is increased more than an order of magnitude compared to other techniques in the same wavelength range.
- Published
- 2018
25. Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles
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Henry N. Chapman, Benedikt J. Daurer, M. Bucher, Janos Hajdu, Daniel Westphal, Johan Bielecki, M. Mueller, Mario Sauppe, Jacek Krzywinski, Daniel S. D. Larsson, M. Marvin Seibert, Thomas Moeller, Alessandro Zani, Jonas A. Sellberg, Max F. Hantke, Gyula Faigel, Gijs van der Schot, Tais Gorkhover, Anton Barty, Filipe R. N. C. Maia, M. Swiggers, Andrew J. Morgan, Carl Nettelblad, Anatoli Ulmer, Kenta Okamoto, Alberto Pietrini, Martin Svenda, Jakob Andreasson, Christoph Bostedt, Daniela Rupp, Nicusor Timneanu, Kerstin Muehlig, Ken R. Ferguson, Petr Bruza, Dirk Hasse, Tomas Ekeberg, Sebastian Carron, and Garth J. Williams
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Diffraction ,Attosecond ,Holography ,Phase (waves) ,FOS: Physical sciences ,02 engineering and technology ,01 natural sciences ,law.invention ,Nanoclusters ,Optics ,law ,0103 physical sciences ,ddc:530 ,Physics - Atomic and Molecular Clusters ,010306 general physics ,Physics ,business.industry ,Resolution (electron density) ,021001 nanoscience & nanotechnology ,Atomic and Molecular Physics, and Optics ,Electronic, Optical and Magnetic Materials ,Femtosecond ,0210 nano-technology ,business ,Atomic and Molecular Clusters (physics.atm-clus) ,Ultrashort pulse ,Optics (physics.optics) ,Physics - Optics - Abstract
Nature photonics 12(3), 150 - 153 (2018). doi:10.1038/s41566-018-0110-y, Ultrafast X-ray imaging on individual fragile specimens such as aerosols1, metastable particles2, superfluid quantum systems3 and live biospecimens4 provides high-resolution information that is inaccessible with conventional imaging techniques. Coherent X-ray diffractive imaging, however, suffers from intrinsic loss of phase, and therefore structure recovery is often complicated and not always uniquely defined4,5. Here, we introduce the method of in-flight holography, where we use nanoclusters as reference X-ray scatterers to encode relative phase information into diffraction patterns of a virus. The resulting hologram contains an unambiguous three-dimensional map of a virus and two nanoclusters with the highest lateral resolution so far achieved via single shot X-ray holography. Our approach unlocks the benefits of holography for ultrafast X-ray imaging of nanoscale, non-periodic systems and paves the way to direct observation of complex electron dynamics down to the attosecond timescale., Published by Nature Publ. Group, London [u.a.]
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- 2018
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26. High-accuracy wavefront sensing for x-ray free electron lasers
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Hae Ja Lee, Frank Seiboth, Anne Sakdinawat, Matthew Seaberg, Diling Zhu, Jacek Krzywinski, Yiping Feng, Andrew Aquila, Corey L. Hardin, Gabriel Marcus, Sébastien Boutet, Daniele Cocco, Bob Nagler, Yuantao Ding, and Yanwei Liu
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Physics ,Wavefront ,business.industry ,Free-electron laser ,Particle accelerator ,02 engineering and technology ,Wavefront sensor ,Grating ,021001 nanoscience & nanotechnology ,Laser ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,Linear particle accelerator ,Electronic, Optical and Magnetic Materials ,law.invention ,010309 optics ,Interferometry ,Optics ,law ,0103 physical sciences ,ddc:530 ,0210 nano-technology ,business - Abstract
Optica 5(8), 967 - 975 (2018). doi:10.1364/OPTICA.5.000967, Systematic understanding and real-time feedback capability for x-ray free electron laser (FEL) accelerator and optical components are critical for scientific experiments and instrument performance. Single-shot wavefront sensing enables characterization of the intensity and local electric field distribution at the sample plane, something that is important for understanding scientific experiments such as nonlinear studies. It can also provide feedback for alignment and tuning of the FEL beam and instrumentation optics, leading to optimal instrument performance and greater operational efficiency. A robust, sensitive, and accurate single-shot wavefront sensor for x-ray FEL beams using single grating Talbot interferometry has been developed. Experiments performed at the Linac Coherent Light Source (LCLS) demonstrate 3𝜎 sensitivity and accuracy, both better than 𝜆/100, and retrieval of hard x-ray (𝜆=0.13 nm, 𝐸=9.5 keV) wavefronts in 3D. Exhibiting high performance from both unfocused and focused beams, the same setup can be used to systematically study the wavefront from the FEL output, beam transport optics, and endstation focusing optics. This technique can be extended for use with softer and harder x rays with modified grating configurations., Published by OSA, Washington, DC
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- 2018
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27. Synchrotron topographic evaluation of strain around craters generated by irradiation with X-ray pulses from free electron laser with different intensities
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Marc Messerschmidt, Alexander Graf, Jerzy B. Pelka, Ryszard Sobierajski, D. Żymierska, Dorota Klinger, Krzysztof Wieteska, John D. Bozek, Jérôme Gaudin, Stefan P. Hau-Riege, Richard A. London, Carsten Paulmann, Wojciech Wierzchowski, Jacek Krzywinski, Stefan Moeller, Tomáš Burian, Christoph Bostedt, and Jaromír Chalupský
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Diffraction ,Nuclear and High Energy Physics ,Materials science ,Silicon ,business.industry ,Free-electron laser ,chemistry.chemical_element ,Synchrotron ,law.invention ,Wavelength ,Optics ,Impact crater ,chemistry ,law ,Femtosecond ,Irradiation ,business ,Instrumentation - Abstract
The silicon sample irradiated with femtosecond soft X-ray pulses at the Linac Coherent Light Source has been studied with several synchrotron X-ray diffraction topographic methods at HASYLAB. The irradiations were performed for two different wavelengths combined with various impact energy controlled by means of the gas attenuator. The topographic investigation revealed characteristic images of the created craters included the inner region reflecting the X-rays at lower angle, coming most probably from part of the silicon melted during the irradiation. The melted region was surrounded by strained outer region, similar to those observed in the case of rod-like inclusion but less regular in view of some irregularity of the beam used for generation of the craters. It was observed that the higher impact energy higher dose of the irradiating pulses resulted in increasing diameter of the melted area of the crater and the range of the strained region around it. Some features of the monochromatic and white beam back reflection section images of the craters were reproduced in numerically simulated images approximating the strain field in the crater by a droplet containing uniformly distributed point inclusions.
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- 2015
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28. Influence of imperfections in a wedged multilayer Laue lens for the focusing of X-rays investigated by beam propagation method
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A. Andrejczuk, Jacek Krzywinski, and Saša Bajt
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Physics ,Nuclear and High Energy Physics ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,Physics::Optics ,X-ray optics ,Electromagnetic radiation ,law.invention ,Lens (optics) ,Optics ,law ,Beam propagation method ,Laser beam quality ,business ,Instrumentation - Abstract
s Using a beam propagation method the focusing properties of a one-dimensional wedged multilayer Laue lens with imperfections have been investigated theoretically. The calculations were done for a lens focusing 20 keV X-rays to
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- 2015
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29. The Atomic, Molecular and Optical Science instrument at the Linac Coherent Light Source
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Sebastian Schorb, Michael Holmes, Maximilian Bucher, Sebastian Carron, Ryan Coffee, John D. Bozek, Jing Yin, Christoph Bostedt, Stefan Moeller, Timur Osipov, G. Ivan Curiel, Michael P. Minitti, Marc Messerschmidt, Jacek Krzywinski, Alexander Wallace, Ken R. Ferguson, Ankush Mitra, J. C. Castagna, Peter Noonan, and Michele Swiggers
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Physics ,FEL ,Nuclear and High Energy Physics ,spectroscopy ,Radiation ,Spectrometer ,business.industry ,ultrafast ,Detector ,Optical physics ,imaging ,Particle accelerator ,Nanotechnology ,Electromagnetic radiation ,Linear particle accelerator ,Computer Science::Computers and Society ,law.invention ,X-ray ,Optics ,law ,business ,Spectroscopy ,Instrumentation ,Ultrashort pulse ,Free-Electron Lasers - Abstract
A description of the Atomic, Molecular and Optical Sciences (AMO) instrument at the Linac Coherent Light Source is presented. Recent scientific highlights illustrate the imaging, time-resolved spectroscopy and high-power density capabilities of the AMO instrument., The Atomic, Molecular and Optical Science (AMO) instrument at the Linac Coherent Light Source (LCLS) provides a tight soft X-ray focus into one of three experimental endstations. The flexible instrument design is optimized for studying a wide variety of phenomena requiring peak intensity. There is a suite of spectrometers and two photon area detectors available. An optional mirror-based split-and-delay unit can be used for X-ray pump–probe experiments. Recent scientific highlights illustrate the imaging, time-resolved spectroscopy and high-power density capabilities of the AMO instrument.
- Published
- 2015
30. Contrasting behavior of covalent and molecular carbon allotropes exposed to extreme ultraviolet and soft x-ray free-electron laser radiation
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Jaromír Chalupský, Libor Juha, Ryszard Sobierajski, L. Vysin, Karel Kolacek, Michael Störmer, Sven Toleikis, Harald Sinn, Věra Hájková, Jiri Vacik, Makina Yabashi, Beata Ziaja, Jacek Krzywinski, M. Toufarová, K. Tiedtke, Mitsuru Nagasono, Jérôme Gaudin, Tomáš Burian, Vladimír Vorlíček, and Nikita Medvedev
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Condensed Matter - Materials Science ,Materials science ,Fullerene ,Materials Science (cond-mat.mtrl-sci) ,FOS: Physical sciences ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Molecular physics ,Crystal ,Condensed Matter::Materials Science ,symbols.namesake ,Amorphous carbon ,Extreme ultraviolet ,0103 physical sciences ,Atom ,Physics::Atomic and Molecular Clusters ,symbols ,ddc:530 ,Irradiation ,Thin film ,010306 general physics ,0210 nano-technology ,Raman spectroscopy - Abstract
Physical review / B 96(21), 214101 (2017). doi:10.1103/PhysRevB.96.214101, All carbon materials, e.g., amorphous carbon (a-C) coatings and $C_{60}$ fullerene thin films, play an important role in short-wavelength free-electron laser (FEL) research motivated by FEL optics development and prospective nanotechnology applications. Responses of a-C and $C_{60}$ layers to the extreme ultraviolet (SPring-8 Compact SASESource in Japan) and soft x-ray (free-electron laser in Hamburg) free-electron laser radiation are investigated by Raman spectroscopy, differential interference contrast, and atomic force microscopy. A remarkable difference in the behavior of covalent (a-C) and molecular ($C_{60}$) carbonaceous solids is demonstrated under these irradiation conditions. Low thresholds for ablation of a fullerene crystal (estimated to be around 0.15 eV/atom for $C_{60}$ vs 0.9 eV/atom for a-C in terms of the absorbed dose) are caused by a low cohesive energy of fullerene crystals. An efficient mechanism of the removal of intact $C_{60}$ molecules from the irradiated crystal due to Coulomb repulsion of fullerene-cage cation radicals formed by the ionizing radiation is revealed by a detailed modeling., Published by Inst., Woodbury, NY
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- 2017
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31. Generating Single-Spike Hard X-Ray Pulses with Nonlinear Bunch Compression in Free-Electron Lasers
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T. Maxwell, Zhirong Huang, Yiping Feng, Yuantao Ding, Erik Hemsing, Agostino Marinelli, Shenglin Huang, Alberto Lutman, Diling Zhu, and Jacek Krzywinski
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Physics ,Free electron model ,010308 nuclear & particles physics ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,Attosecond ,X-ray ,Physics::Optics ,General Physics and Astronomy ,Laser ,01 natural sciences ,law.invention ,Nonlinear system ,Optics ,law ,Hard X-rays ,Compression (functional analysis) ,0103 physical sciences ,Physics::Atomic Physics ,Single spike ,010306 general physics ,business - Abstract
A simple method for generating single-spike hard x-ray pulses in free-electron lasers (FELs) has been developed at the Linac Coherent Light Source (LCLS). This is realized by nonlinear bunch compression using 20-pC bunch charge, demonstrated in the hard x-ray regime at 5.6 and 9 keV, respectively. Measurements show about half of the FEL shots containing a single-spike spectrum. At 5.6-keV photon energy, the single-spike shots have a mean pulse energy of about 10 μJ with 70% intensity fluctuation and the pulse full width at half maximum is evaluated to be at 200-as level.
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- 2017
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32. Application of x-ray simulations in development of instruments at Linear Coherent Light Source (LCLS) at National Accelerator Laboratory (SLAC) (Conference Presentation)
- Author
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Jacek Krzywinski, Kawal Sawhney, Oleg Chubar, Gabriel Marcus, Yiping Feng, and Lin Zhang
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Physics ,business.industry ,Fourier optics ,Electrical engineering ,Radiation ,Undulator ,Laser ,Radiation properties ,law.invention ,Optics ,law ,Physics::Accelerator Physics ,business ,Diffraction grating ,Monochromator ,Coherence (physics) - Abstract
Development of X-ray Free Electron Lasers (XFEL) opens new era in X-ray science. The full exploitation of unique properties of the XFEL radiation require challenging solutions that preserves radiation properties from a coherent, diffraction limited source under unprecedented instantaneous and average power load. We will present properties of simulated XFEL radiation such as coherence, source shape, divergence and longitudinal location inside the undulator. Recently, a construction of the LCLS II project has started as a major upgrade to the LCLS facility that will increase the average power of the XFEL up to 1 kW level. We will show how the X-ray simulations are used for minimizing thermal distortions on focusing of the LCLS II X-ray beams by 1 meter long Kirkpatrick-Baez mirrors. We will discuss and compare accuracy of simulations using different simulation methods and packages applied to focusing optics. The design of instruments should mitigate the damage to the optics caused by the tremendous instantaneous XFEL power. We will present X-ray simulation of the damage to the diffraction grating coatings and compare it with experimental results obtained at LCLS. The self-seeded mode of the LCLS operation increases temporal coherence and reduces greatly the bandwidth of the X-ray radiation. The results of time dependent X-ray simulations of the LCLS radiation passing through the seeding monochromator will be presented. We will compare two different approaches: Fourier Optics and an approach based on a dispersive system described by 6x6 pulse ray matrixes.
- Published
- 2017
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33. Efficiency and coherence preservation studies of Be refractive lenses for XFELO application
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Stanislav Stoupin, Kwang-Je Kim, Lahsen Assoufid, Tomasz Kolodziej, Xianbo Shi, Walan Grizolli, Yuri Shvyd'ko, Jun Qian, and Jacek Krzywinski
- Subjects
Nuclear and High Energy Physics ,Photon ,Materials science ,Physics::Optics ,chemistry.chemical_element ,X-ray optics ,02 engineering and technology ,Surface finish ,01 natural sciences ,Collimated light ,law.invention ,Optics ,law ,0103 physical sciences ,010306 general physics ,Instrumentation ,Wavefront ,Radiation ,business.industry ,021001 nanoscience & nanotechnology ,Lens (optics) ,chemistry ,Beryllium ,0210 nano-technology ,business ,Coherence (physics) - Abstract
Performance tests of parabolic beryllium refractive lenses, considered as X-ray focusing elements in the future X-ray free-electron laser oscillator (XFELO), are reported. Single and double refractive lenses were subject to X-ray tests, which included: surface profile, transmissivity measurements, imaging capabilities and wavefront distortion with grating interferometry. Optical metrology revealed that surface profiles were close to the design specification in terms of the figure and roughness. The transmissivity of the lenses is >94% at 8 keV and >98% at 14.4 and 18 keV. These values are close to the theoretical values of ideal lenses. Images of the bending-magnet source obtained with the lenses were close to the expected ones and did not show any significant distortion. Grating interferometry revealed that the possible wavefront distortions produced by surface and bulk lens imperfections were on the level of ∼λ/60 for 8 keV photons. Thus the Be lenses can be succesfully used as focusing and beam collimating elements in the XFELO.
- Published
- 2017
34. Non-thermal damage to lead tungstate induced by intense short-wavelength laser radiation (Conference Presentation)
- Author
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Stefan P. Hau-Riege, Michael Rowen, A.R. Khorsand, T. Whitcher, H. Wabnitz, Makina Yabashi, Libor Juha, Marta Fajardo, Nicusor Timneanu, Sam Vinko, Jerzy B. Pelka, Pavel Boháček, Dorota Klinger, David Riley, Roland R. Fäustlin, Tomáš Burian, Harald Sinn, Michele Swiggers, Ryszard Sobierajski, Joshua J. Turner, Marc Messerschmidt, Philip Heimann, Stefan Moeller, Vera Hájková, Marek Jurek, Ludek Vysin, Maria V. Kozlova, Robert Nagler, Mitsuru Nagasono, Jérôme Gaudin, Thomas Dzelzainis, Art J. Nelson, William F. Schlotter, Janos Hajdu, Oldrich Renner, Kai Tiedtke, Richard W. Lee, Vojtech Vozda, Karel Saksl, Justin Wark, Sven Toleikis, Jakob Andreasson, Jaromír Chalupský, Jacek Krzywinski, Thomas Tschentscher, and Bianca Iwan
- Subjects
Materials science ,Photon ,Free-electron laser ,Electron ,Radiation ,Warm dense matter ,Laser ,law.invention ,symbols.namesake ,law ,symbols ,State of matter ,Atomic physics ,Raman spectroscopy - Abstract
Interaction of short-wavelength free-electron laser (FEL) beams with matter is undoubtedly a subject to extensive investigation in last decade. During the interaction various exotic states of matter, such as warm dense matter, may exist for a split second. Prior to irreversible damage or ablative removal of the target material, complicated electronic processes at the atomic level occur. As energetic photons impact the target, electrons from inner atomic shells are almost instantly photo-ionized, which may, in some special cases, cause bond weakening, even breaking of the covalent bonds, subsequently result to so-called non-thermal melting. The subject of our research is ablative damage to lead tungstate (PbWO4) induced by focused short-wavelength FEL pulses at different photon energies. Post-mortem analysis of complex damage patterns using the Raman spectroscopy, atomic-force (AFM) and Nomarski (DIC) microscopy confirms an existence of non-thermal melting induced by high-energy photons in the ionic monocrystalline target. Results obtained at Linac Coherent Light Source (LCLS), Free-electron in Hamburg (FLASH), and SPring-8 Compact SASE Source (SCSS) are presented in this Paper.
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- 2017
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35. Statistical characterization of an x-ray FEL in the spectral domain
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Diling Zhu, Yiping Feng, Jacek Krzywinski, Juhao Wu, Zhirong Huang, and Alberto Lutman
- Subjects
Physics ,Spectrometer ,business.industry ,Bandwidth (signal processing) ,Self-amplified spontaneous emission ,Free-electron laser ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Spectral line ,Computational physics ,Optics ,Exponential growth ,0103 physical sciences ,Physics::Accelerator Physics ,Spontaneous emission ,010306 general physics ,0210 nano-technology ,business ,Radiant intensity - Abstract
We have experimentally measured and characterized a Self-Amplified Spontaneous Emission (SASE) Free Electron Laser (FEL) in the spectral domain. Spectra were captured for hard X-rays using a pair of transmissive bent-crystal spectrometers on a single-shot basis. The probability distributions of the spectral intensity as a function of an increasing bandwidth were studied in different SASE regimes. The number of spectral modes was found to grow linearly in the exponential growth regime, but the growth became super-linear at saturation and in deeper saturation, consistent with the current theoretical understanding and simulations. The spectral intensity fluctuations were found to decrease when a wider portion of the beam (transverse to the direction of the dispersion) was integrated, indicating a partial spatial coherence, the degree of which was then estimated.
- Published
- 2017
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36. Soft x ray absorption spectroscopy of metalloproteins and high valent metal complexes at room temperature using free electron lasers
- Author
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Heike Löchel, Stefan Moeller, James M. Glownia, Johannes Messinger, Alexander Föhlisch, Sergey Koroidov, Uwe Bergmann, Philippe Wernet, Dennis Nordlund, Sandy Suseno, Anurag Kawde, Benedikt Lassalle-Kaiser, Roberto Alonso-Mori, Jan Kern, Hartawan Laksmono, Sheraz Gul, Christian Weniger, Ruchira Chatterjee, Jacek Krzywinski, Vittal K. Yachandra, Junko Yano, Alexei Erko, Michael P. Minitti, Andrew S. Borovik, Zhiji Han, Joshua J. Turner, Georgi L. Dakovski, Clemens Weninger, Ethan A. Hill, Raymond G. Sierra, Emily Y. Tsui, Wilson Quevedo, Thomas Kroll, Franklin D. Fuller, A Firsov, Taketo Taguchi, Theodor Agapie, Rolf Mitzner, Markus Kubin, Jens Rehanek, and Jacob S. Kanady
- Subjects
Free electron model ,Spin states ,Absorption spectroscopy ,Analytical chemistry ,02 engineering and technology ,010402 general chemistry ,Experimental Methodologies ,Physical Chemistry ,01 natural sciences ,Metal ,ARTICLES ,Transition metal ,lcsh:QD901-999 ,Molecular orbital ,Spectroscopy ,Instrumentation ,Fysikalisk kemi ,X-ray spectroscopy ,Radiation ,Chemistry ,Institut für Physik und Astronomie ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,0104 chemical sciences ,visual_art ,visual_art.visual_art_medium ,Condensed Matter::Strongly Correlated Electrons ,Inhouse research on structure dynamics and function of matter ,lcsh:Crystallography ,0210 nano-technology - Abstract
X-ray absorption spectroscopy at the L-edge of 3d transition metals provides unique information on the local metal charge and spin states by directly probing 3d-derived molecular orbitals through 2p-3d transitions. However, this soft x-ray technique has been rarely used at synchrotron facilities for mechanistic studies of metalloenzymes due to the difficulties of x-ray-induced sample damage and strong background signals from light elements that can dominate the low metal signal. Here, we combine femtosecond soft x-ray pulses from a free-electron laser with a novel x-ray fluorescence-yield spectrometer to overcome these difficulties. We present L-edge absorption spectra of inorganic high-valent Mn complexes (Mn ∼ 6–15 mmol/l) with no visible effects of radiation damage. We also present the first L-edge absorption spectra of the oxygen evolving complex (Mn4CaO5) in Photosystem II (Mn
- Published
- 2017
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37. Measurement of high-dynamic range x-ray Thomson scattering spectra for the characterization of nano-plasmas at LCLS
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R. P. Drake, C. P. O’Grady, Timur Osipov, Dominik Kraus, Ken R. Ferguson, Abraham Levitan, Thomas Fennel, Sebastian Carron, Siegfried Glenzer, Ryan Coffee, B. Bachmann, M. Swiggers, Stefan P. Hau-Riege, Christian Peltz, Karl-Heinz Meiwes-Broer, S. Skruszewicz, Christoph Bostedt, Tais Gorkhover, Tilo Döppner, Luke Fletcher, E. J. Gamboa, Michael MacDonald, T. Pardini, Maximilian Bucher, Sebastian Göde, and Jacek Krzywinski
- Subjects
Physics ,Scattering ,Thomson scattering ,business.industry ,Physics::Optics ,Laser pumping ,Laser ,01 natural sciences ,010305 fluids & plasmas ,law.invention ,Optics ,Orders of magnitude (time) ,law ,Ionization ,0103 physical sciences ,Femtosecond ,Atomic physics ,010306 general physics ,business ,Instrumentation ,Ultrashort pulse - Abstract
Atomic clusters can serve as ideal model systems for exploring ultrafast (∼100 fs) laser-driven ionization dynamics of dense matter on the nanometer scale. Resonant absorption of optical laser pulses enables heating to temperatures on the order of 1 keV at near solid density conditions. To date, direct probing of transient states of such nano-plasmas was limited to coherent x-ray imaging. Here we present the first measurement of spectrally resolved incoherent x-ray scattering from clusters, enabling measurements of transient temperature, densities, and ionization. Single shot x-ray Thomson scattering signals were recorded at 120 Hz using a crystal spectrometer in combination with a single-photon counting and energy-dispersive pnCCD. A precise pump laser collimation scheme enabled recording near background-free scattering spectra from Ar clusters with an unprecedented dynamic range of more than 3 orders of magnitude. Such measurements are important for understanding collective effects in laser-matter interactions on femtosecond time scales, opening new routes for the development of schemes for their ultrafast control.
- Published
- 2016
38. Resonant Kα spectroscopy of solid-density aluminum plasmas
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O. Ciricosta, P.A. Heimann, Libor Juha, Jaromír Chalupský, K. Engelhorn, Tomáš Burian, D. S. Rackstraw, Justin Wark, Diling Zhu, Joshua J. Turner, Hyun-Kyung Chung, C. R. D. Brown, Benny Wu, Sven Toleikis, A. Scherz, Ulf Zastrau, Roger Falcone, Byoung-ick Cho, L. Vysin, William F. Schlotter, Andrew Higginbotham, Nina Rohringer, Catherine Graves, Tianhan Wang, M. Messersmidt, R W Lee, H. J. Lee, Věra Hájková, Bob Nagler, Sam Vinko, C. D. Murphy, Jacek Krzywinski, and Yuan Ping
- Subjects
Free electron model ,Physics ,Photon ,Astrophysics::High Energy Astrophysical Phenomena ,General Physics and Astronomy ,Electron ,Ion ,Atom ,ddc:550 ,Production (computer science) ,Absorption (logic) ,Atomic physics ,Spectroscopy - Abstract
Physical review letters 109, 245003 (2012). doi:10.1103/PhysRevLett.109.245003, Published by APS, College Park, Md.
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- 2016
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39. Perspective for high energy density studies on X-ray FELs
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Sebastian Göde, R. Sobierajski, Gianluca Gregori, Michaela Kozlova, Gerd Röpke, Karel Saksl, Art J. Nelson, Jacek Krzywinski, Andreas Przystawik, K. S. Budil, S. Düsterer, Thomas Tschentscher, Justin Wark, Philip Heimann, Sven Toleikis, J. Cihelka, Thomas Dzelzainis, William E. White, Libor Juha, R. C. Cauble, Josef Tiggesbäumker, R. R. Fäustlin, Saša Bajt, T. Whitcher, R. Thiele, Fida Khattak, Bob Nagler, Heidi Reinholz, Richard W. Lee, Henry N. Chapman, Dorota Klinger, E. Förster, T. Bornath, Siegfried Glenzer, Carsten Fortmann, Tomáš Burian, Karl-Heinz Meiwes-Broer, Marta Fajardo, P. Mercere, Roger Falcone, Ronald Redmer, Tim Laarmann, Sam Vinko, Hyesog Lee, Věra Hájková, Ronnie Shepherd, Jerome B. Hastings, Ulf Zastrau, Marek Jurek, J. Chalupsky, William J. Murphy, Tilo Döppner, A.R. Khorsand, Ingo Uschmann, and David Riley
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Physics ,Photon ,business.industry ,Parabolic reflector ,Free-electron laser ,DESY ,Warm dense matter ,Photodiode ,law.invention ,Optics ,law ,Physics::Accelerator Physics ,Absorption (electromagnetic radiation) ,Spectroscopy ,business - Abstract
We report on the x-ray absorption of Warm Dense Matter experiment at the FLASH Free Electron Laser (FEL) facility at DESY. The FEL beam is used to produce Warm Dense Matter with soft x-ray absorption as the probe of electronic structure. A multilayer-coated parabolic mirror focuses the FEL radiation, to spot sizes as small as 0.3μm in a ∼15fs pulse of containing >10 12 photons at 13.5 nm wavelength, onto a thin sample. Silicon photodiodes measure the transmitted and reflected beams, while spectroscopy provides detailed measurement of the temperature of the sample. The goal is to measure over a range of intensities approaching 10 18 W/cm 2. Experimental results will be presented along with theoretical calculations. A brief report on future FEL efforts will be given. © 2009 SPIE.
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- 2016
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40. Decay of Cystalline Order and Equilibration during the Solid-to-Plasma Transition Induced by 20-fs Microfocused 92-eV Free-Electron-Laser Pulses
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Fida Khattak, Bob Nagler, David Riley, Art J. Nelson, Philip Heimann, Jacek Krzywinski, Ryszard Sobierajski, S. Toleikis, Michaela Kozlova, Sam Vinko, Th. Tschentscher, R. R. Fäustlin, Thomas Dzelzainis, F.B. Rosmej, Richard W. Lee, Věra Hájková, Justin Wark, M. Jurek, J. Chalupsky, T. Whitcher, Libor Juha, Eric Galtier, Faculty of Science and Technology, and XUV Optics
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Materials science ,Auger effect ,Free-electron laser ,General Physics and Astronomy ,Photoionization ,Electron ,Laser ,law.invention ,symbols.namesake ,Autoionization ,Physics::Plasma Physics ,law ,Ionization ,METIS-304849 ,IR-104534 ,ddc:550 ,symbols ,Electron temperature ,Physics::Atomic Physics ,Atomic physics - Abstract
We have studied a solid-to-plasma transition by irradiating Al foils with the FLASH free electron laser at intensities up to 10(16) W/cm(2). Intense XUV self-emission shows spectral features that are consistent with emission from regions of high density, which go beyond single inner-shell photoionization of solids. Characteristic features of intrashell transitions allowed us to identify Auger heating of the electrons in the conduction band occurring immediately after the absorption of the XUV laser energy as the dominant mechanism. A simple model of a multicharge state inverse Auger effect is proposed to explain the target emission when the conduction band at solid density becomes more atomiclike as energy is transferred from the electrons to the ions. This allows one to determine, independent of plasma simulations, the electron temperature and density just after the decay of crystalline order and to characterize the early time evolution.
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- 2016
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41. Stimulated X-Ray Raman Scattering with Free-Electron Laser Sources
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Alvaro Sanchez-Gonzalez, C. Bostedt, Duncan P. Ryan, Raimund Feifel, S. Carron Monterro, Ryan Coffee, Vitali Zhaunerchyk, Oliver D. Mücke, Nina Rohringer, Jochen Küpper, Jan-Erik Rubensson, Benjamin Erk, Conny Såthe, Richard J. Squibb, Clemens Weninger, Thomas Kierspel, R. A. London, Marcus Agåker, Anders Lindahl, Joseph Nordgren, T. Mullins, John D. Bozek, Jacek Krzywinski, Melanie Mucke, Michael Purvis, Alberto Lutman, Daniel Rolles, Victor Kimberg, Markus Ilchen, Jorge J. Rocca, and T. Maxwell
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Astrophysics::High Energy Astrophysical Phenomena ,Free-electron laser ,chemistry.chemical_element ,Laser ,Spectral line ,law.invention ,symbols.namesake ,Neon ,X-ray Raman scattering ,chemistry ,law ,symbols ,Light-matter interaction ,Spontaneous emission ,Atomic physics ,Raman spectroscopy ,Raman scattering - Abstract
Stimulated electronic x-ray Raman scattering is the building block for several proposed x-ray pump probe techniques, that would allow the study of electron dynamics at unprecedented timescales. We present high spectral resolution data on stimulated electronic x-ray Raman scattering in a gas sample of neon using a self-amplified spontaneous emission x-ray free-electron laser. Despite the limited spectral coherence and broad bandwidth of these sources, high-resolution spectra can be obtained by statistical methods, opening the path to coherent stimulated x-ray Raman spectroscopy. An extension of these ideas to molecules and the results of a recent experiment in CO are discussed.
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- 2016
42. Hetero-site-specific X-ray pump-probe spectroscopy for femtosecond intramolecular dynamics
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Timur Osipov, Cédric Bomme, Tais Gorkhover, Dipanwita Ray, Benjamin Erk, Gilles Doumy, Christoph Bostedt, Nora Berrah, Jacek Krzywinski, S. T. Pratt, Stephen H. Southworth, M. Bucher, Bertold Krässig, Anne Marie March, Alberto Lutman, Ken R. Ferguson, Dooshaye Moonshiram, Elliot P. Kanter, Antonio Picón, Linda Young, Agostino Marinelli, C. S. Lehmann, Daniel Rolles, Phay J. Ho, and Artem Rudenko
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Materials science ,Science ,General Physics and Astronomy ,02 engineering and technology ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Dissociation (chemistry) ,Article ,chemistry.chemical_compound ,Ionization ,0103 physical sciences ,Molecule ,Redistribution (chemistry) ,010306 general physics ,Spectroscopy ,Multidisciplinary ,Xenon difluoride ,General Chemistry ,021001 nanoscience & nanotechnology ,chemistry ,Intramolecular force ,Femtosecond ,ddc:500 ,Atomic physics ,0210 nano-technology - Abstract
Nature Communications 7, 11652 (2016). doi:10.1038/ncomms11652, New capabilities at X-ray free-electron laser facilities allow the generation of two-colour femtosecond X-ray pulses, opening the possibility of performing ultrafast studies of X-ray-induced phenomena. Particularly, the experimental realization of hetero-site-specific X-ray-pump/X-ray-probe spectroscopy is of special interest, in which an X-ray pump pulse is absorbed at one site within a molecule and an X-ray probe pulse follows the X-ray-induced dynamics at another site within the same molecule. Here we show experimental evidence of a hetero-site pump-probe signal. By using two-colour 10-fs X-ray pulses, we are able to observe the femtosecond time dependence for the formation of F ions during the fragmentation of XeF$_2$ molecules following X-ray absorption at the Xe site., Published by Nature Publishing Group, London
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- 2016
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43. Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser
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Christoph Bostedt, Marc Messerschmidt, Anton Barty, M. Marvin Seibert, Christina Y. Hampton, Henry N. Chapman, Jakob Andreasson, N. Duane Loh, Michael J. Bogan, Sebastian Schorb, Dusko Odic, Holger Fleckenstein, Nicola Coppola, Benjamin Erk, Bianca Iwan, Robert L. Shoeman, Meng Liang, Georg Weidenspointner, Stephan Kassemeyer, Raymond G. Sierra, Christian Reich, Tomas Ekeberg, Lars Gumprecht, Günter Hauser, Ilme Schlichting, Faton Krasniqi, Janos Hajdu, Carlo Schmidt, Filipe R. N. C. Maia, Sascha W. Epp, Olof Jönsson, Lothar Strüder, Miriam Barthelmess, Inger Andersson, Andrew V. Martin, Benedikt Rudek, Cornelia B. Wunderer, Nils Kimmel, Martin Svenda, Saša Bajt, John D. Bozek, Virginie Seltzer, Lukas Lomb, Heike Soltau, Daniel Rolles, Matthias Frank, Chantal Abergel, Helmut Hirsemann, Heinz Graafsma, Jacek Krzywinski, Daniel P. DePonte, Daniel Westphal, Joachim Ullrich, Peter Holl, Robert Hartmann, Andreas Hartmann, Artem Rudenko, Andrew Aquila, Jean-Michel Claverie, Lutz Foucar, Department of Cell and Molecular Biology [Uppsala], Uppsala University, Information génomique et structurale (IGS), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Université Paris Diderot - Paris 7 (UPD7), Linac Coherent Light Source (LCLS), SLAC National Accelerator Laboratory (SLAC), Stanford University-Stanford University, Centre for Quantum Engineering and Space-time Research (QUEST), Leibniz Universität Hannover=Leibniz University Hannover, Department of Molecular Biology, Swedish University of Agricultural Sciences (SLU), Lawrence Livermore National Laboratory (LLNL), Brain imaging (LIAMA), Laboratoire Franco-Chinois d'Informatique, d'Automatique et de Mathématiques Appliquées (LIAMA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Chinese Academy of Sciences [Changchun Branch] (CAS)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institute of Automation - Chinese Academy of Sciences-Centre National de la Recherche Scientifique (CNRS)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Chinese Academy of Sciences [Changchun Branch] (CAS)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institute of Automation - Chinese Academy of Sciences-Centre National de la Recherche Scientifique (CNRS), University of Oxford, Public Medicine Infectious Diseases Section, SUN, Argonne National Laboratory [Lemont] (ANL), Synchrotron SOLEIL (SSOLEIL), Centre National de la Recherche Scientifique (CNRS), Stanford University, National Science Foundation [Arlington] (NSF), Max Planck Institute for Medical Research [Heidelberg], Max-Planck-Gesellschaft, Deutsches Elektronen-Synchrotron [Hamburg] (DESY), Kansas State University, CHU Pitié-Salpêtrière [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Centre d'étude spatiale des rayonnements (CESR), Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Midi-Pyrénées (OMP), Institut de Recherche pour le Développement (IRD)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Centre National de la Recherche Scientifique (CNRS), Department of Biomolecular Mechanisms, Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Max-Planck-Institut für Kernphysik (MPIK), Space Sciences Laboratory [Berkeley] (SSL), University of California [Berkeley] (UC Berkeley), University of California (UC)-University of California (UC), DESY, Ctr Free Electron Laser Sci, D-22607 Hamburg, Germany, Department of Cell and Molecular Biology [Sweden] (DCMB), Uppsala University-Medical Nobel Institute, Linac Coherent Light Source, SLAC - National Accelerator Laboratory, Leibniz Universität Hannover [Hannover] (LUH), University of Oxford [Oxford], Stanford Linear Accelerator Center (SLAC), Stanford University [Stanford], Centre de Référence National 'Syndrome Gilles de la Tourette', Pôle des Maladies du Système Nerveux, Groupe Hospitalier Pitié-Salpêtrière, Assistance Publique des Hôpitaux de Paris, Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Midi-Pyrénées (OMP), Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS), University of California [Berkeley], University of California-University of California, Institute of Automation - Chinese Academy of Sciences-Institut National de Recherche en Informatique et en Automatique (Inria)-Chinese Academy of Sciences [Changchun Branch] (CAS)-Institut National de la Recherche Agronomique (INRA)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institute of Automation - Chinese Academy of Sciences-Institut National de Recherche en Informatique et en Automatique (Inria)-Chinese Academy of Sciences [Changchun Branch] (CAS)-Institut National de la Recherche Agronomique (INRA)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS), Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Observatoire Midi-Pyrénées (OMP), Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Toulouse III - Paul Sabatier (UT3), and Université Fédérale Toulouse Midi-Pyrénées
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0301 basic medicine ,Data Descriptor ,Computer science ,Image Processing ,02 engineering and technology ,Bioinformatics ,law.invention ,Imaging ,Scattering ,Computer-Assisted ,Theoretical ,X-Ray Diffraction ,law ,Models ,Crystallography ,Radiation ,biology ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,Data Collection ,3D reconstruction ,Free-electron laser ,Virus structures ,021001 nanoscience & nanotechnology ,Computer Science Applications ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM] ,Benchmark (computing) ,Biomedical Imaging ,Statistics, Probability and Uncertainty ,0210 nano-technology ,Mimiviridae ,Algorithms ,Information Systems ,Statistics and Probability ,Atom and Molecular Physics and Optics ,Image processing ,Electrons ,Library and Information Sciences ,Education ,03 medical and health sciences ,Optics ,Imaging, Three-Dimensional ,X-rays ,Medical imaging ,Computer Simulation ,ddc:610 ,Particle Size ,Mimivirus ,business.industry ,X-Rays ,Lasers ,Laser ,biology.organism_classification ,030104 developmental biology ,Three-Dimensional ,X-Ray ,Atom- och molekylfysik och optik ,business ,Biological physics - Abstract
Scientific data 3, 160060 (2016). doi:10.1038/sdata.2016.60, Free-electron lasers (FEL) hold the potential to revolutionize structural biology by producing X-ray pules short enough to outrun radiation damage, thus allowing imaging of biological samples without the limitation from radiation damage. Thus, a major part of the scientific case for the first FELs was three-dimensional (3D) reconstruction of non-crystalline biological objects. In a recent publication we demonstrated the first 3D reconstruction of a biological object from an X-ray FEL using this technique. The sample was the giant Mimivirus, which is one of the largest known viruses with a diameter of 450 nm. Here we present the dataset used for this successful reconstruction. Data-analysis methods for single-particle imaging at FELs are undergoing heavy development but data collection relies on very limited time available through a highly competitive proposal process. This dataset provides experimental data to the entire community and could boost algorithm development and provide a benchmark dataset for new algorithms., Published by Nature Publ. Group, London
- Published
- 2016
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44. X ray absorption spectroscopy using a self seeded soft X ray free electron laser
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Stefan Moeller, Raymond G. Sierra, Hartawan Laksmono, Franklin D. Fuller, Roberto Alonso-Mori, Daniel Ratner, Heike Löchel, Yuantao Ding, Dennis Nordlund, Joshua J. Turner, Andrew S. Borovik, Philippe Wernet, Ethan A. Hill, Benedikt Lassalle-Kaiser, Alexander Firsov, Alexander Föhlisch, Ruchira Chatterjee, Uwe Bergmann, Alexei Erko, Alberto Lutman, Maria Brzhezinskaya, Christian Weniger, Sheraz Gul, Vittal K. Yachandra, Junko Yano, Jens Rehanek, Georgi L. Dakovski, Rolf Mitzner, Markus Kubin, Thomas Kroll, Jan Kern, and Jacek Krzywinski
- Subjects
Absorption spectroscopy ,02 engineering and technology ,Optical Physics ,01 natural sciences ,Article ,law.invention ,Optics ,law ,0103 physical sciences ,Electrical and Electronic Engineering ,010306 general physics ,Spectroscopy ,Monochromator ,Physics ,X-ray spectroscopy ,X-ray absorption spectroscopy ,Communications Technologies ,business.industry ,Free-electron laser ,Institut für Physik und Astronomie ,Undulator ,021001 nanoscience & nanotechnology ,Laser ,Atomic and Molecular Physics, and Optics ,Physics::Accelerator Physics ,Inhouse research on structure dynamics and function of matter ,0210 nano-technology ,business - Abstract
X-ray free electron lasers (XFELs) enable unprecedented new ways to study the electronic structure and dynamics of transition metal systems. L-edge absorption spectroscopy is a powerful technique for such studies and the feasibility of this method at XFELs for solutions and solids has been demonstrated. However, the required x-ray bandwidth is an order of magnitude narrower than that of self-amplified spontaneous emission (SASE), and additional monochromatization is needed. Here we compare L-edge x-ray absorption spectroscopy (XAS) of a prototypical transition metal system based on monochromatizing the SASE radiation of the linac coherent light source (LCLS) with a new technique based on self-seeding of LCLS. We demonstrate how L-edge XAS can be performed using the self-seeding scheme without the need of an additional beam line monochromator. We show how the spectral shape and pulse energy depend on the undulator setup and how this affects the x-ray spectroscopy measurements. (C) 2016 Optical Society of America
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- 2016
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45. Ultrafast x-ray-induced nuclear dynamics in diatomic molecules using femtosecond x-ray-pump–x-ray-probe spectroscopy
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Artem Rudenko, Stephen H. Southworth, Anne Marie March, Timur Osipov, Dooshaye Moonshiram, Cédric Bomme, C. S. Lehmann, Agostino Marinelli, Maximilian Bucher, Linda Young, Phay J. Ho, Antonio Picón, Nora Berrah, Christoph Bostedt, Jacek Krzywinski, Dipanwita Ray, Ken R. Ferguson, Elliot P. Kanter, Daniel Rolles, Bertold Krässig, Alberto Lutman, Gilles Doumy, Tais Gorkhover, Benjamin Erk, and S. T. Pratt
- Subjects
Physics ,Quantum Physics ,Atomic Physics (physics.atom-ph) ,Free-electron laser ,X-ray ,FOS: Physical sciences ,02 engineering and technology ,Photoionization ,021001 nanoscience & nanotechnology ,01 natural sciences ,Diatomic molecule ,Physics - Atomic Physics ,Nuclear dynamics ,0103 physical sciences ,Femtosecond ,Physics::Atomic and Molecular Clusters ,ddc:530 ,Atomic physics ,Quantum Physics (quant-ph) ,010306 general physics ,0210 nano-technology ,Spectroscopy ,Ultrashort pulse - Abstract
Physical review / A covering atomic, molecular, and optical physics and quantum information 94(1), 013426(2016). doi:10.1103/PhysRevA.94.013426, The capability of generating two intense, femtosecond x-ray pulses with a controlled time delay opens the possibility of performing time-resolved experiments for x-ray-induced phenomena. We have applied this capability to study the photoinduced dynamics in diatomic molecules. In molecules composed of low-Z elements, K-shell ionization creates a core-hole state in which the main decay mode is an Auger process involving two electrons in the valence shell. After Auger decay, the nuclear wave packets of the transient two-valence-hole states continue evolving on the femtosecond time scale, leading either to separated atomic ions or long-lived quasibound states. By using an x-ray pump and an x-ray probe pulse tuned above the K-shell ionization threshold of the nitrogen molecule, we are able to observe ion dissociation in progress by measuring the time-dependent kinetic energy releases of different breakup channels. We simulated the measurements on N$_2$ with a molecular dynamics model that accounts for K-shell ionization, Auger decay, and the time evolution of the nuclear wave packets. In addition to explaining the time-dependent feature in the measured kinetic energy release distributions from the dissociative states, the simulation also reveals the contributions of quasibound states., Published by Inst., Woodbury, NY
- Published
- 2016
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46. One dimensional focusing with high numerical aperture multilayer Laue lens
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Jacek Krzywinski, Saša Bajt, A. Andrejczuk, Henry N. Chapman, Mauro Prasciolu, and Andrew J. Morgan
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Diffraction ,Materials science ,business.industry ,Extreme ultraviolet lithography ,Bragg's law ,Zone plate ,Collimated light ,law.invention ,Lens (optics) ,Optics ,law ,Focal length ,ddc:530 ,business ,Beam (structure) - Abstract
Proceedings of the 12th International Conference on X-Ray Microscopy, XRM 2014, Melbourne, Australia, 26 Oct 2014 - 31 Oct 2014 ; AIP conference proceedings 1696, 020049 (2016). doi:10.1063/1.4937543, Multilayer Laue lenses (MLLs) capitalize on the developments in multilayer deposition technologies for fabricating reflective coatings, specifically undertaken for EUV lithography, where layer thicknesses of several nanometers can be achieved. MLLs are deposited layer by layer, with their thicknesses following the zone plate law, and then pieces are sliced and extracted for use in focusing. Rays are reflected in the Laue geometry. The efficiency of a MLL can be very high, and is maximized by making the slice equal to about a half Pendellosung period so that most energy is transferred from the undiffracted to the diffracted beam, and by ensuring that the Bragg condition is met at each point in the zone plate. This latter condition requires that the layers are tilted to the beam by an amount that varies with layer position; e.g. for focusing a collimated beam, the layers should be normal to a cylinder of radius of twice the focal length. We have fabricated such tilted-zone MLLs and find that they exhibit improved efficiency across their entire pupil as compared with parallel-zone MLLs. This leads to a higher effective NA of the optic and hence higher resolution., Published by Inst., Melville, NY
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- 2016
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47. Demonstration of self-seeding in a hard-X-ray free-electron laser
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H. Loos, F.-J. Decker, Jacek Krzywinski, William Berg, Heinz-Dieter Nuhn, J. Welch, J. Amann, Simone Spampinati, Jerome B. Hastings, Jihuai Wu, Alexander Zholents, Y. Ding, J. Rzepiela, P. Emma, Zhirong Huang, Stanislav Stoupin, Daniel Ratner, Vladimir Blank, J. Frisch, D.R. Walz, Yiping Feng, Diling Zhu, David Fritz, Emil Trakhtenberg, Ryan Lindberg, Yu. V. Shvyd'ko, Alberto Lutman, Deming Shu, and Sergey Terentyev
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Materials science ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,Free-electron laser ,Undulator ,Laser ,Atomic and Molecular Physics, and Optics ,Electronic, Optical and Magnetic Materials ,law.invention ,Gain-switching ,Optics ,law ,Optoelectronics ,Spontaneous emission ,business ,Lasing threshold ,Monochromator ,Coherence (physics) - Abstract
Lasing in a hard-X-ray free-electron laser is typically seeded from noise due to the self-amplification of spontaneous emission, which limits temporal coherence and spectral characteristics. Researchers now demonstrate self-seeding using X-rays from the first half of the magnetic undulator to seed the second half via a diamond-based monochromator at angstrom wavelengths.
- Published
- 2012
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48. Photon beamlines and diagnostics at LCLS
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J. Galayda, Joshua J. Turner, Y. Feng, D. McMahon, Henrik Loos, C. Gardener, T. McCarville, Daniel Ratner, K. Kishiyama, David H. Dowell, J. Welch, J. Rzepiela, Ryan Coffee, Jeff C. Robinson, Heinz-Dieter Nuhn, Zhirong Huang, R. M. Bionta, A. Miahnahri, Alan Fisher, Regina Soufli, D. Ryutov, S. Lewis, Mark A. McKernan, Stefan Moeller, K. Fong, F.-J. Decker, Stefan P. Hau-Riege, Axel Brachmann, E. Ables, Jacek Krzywinski, P. Hering, Gerald Yocky, J. Arthur, R. H. Iverson, Linda L. Ott, S. Shen, H. Tompkins, Stephan Friedrich, Marc Messerschmidt, P. Stefan, Sasha Gilevich, J. Frisch, B. White, M. J. Pivovaroff, Yuantao Ding, D. Schultz, Baxter Abraham, Juhao Wu, Jerome B. Hastings, S. A. Edstrom, T. Smith, Paul Emma, G. Hays, and G. Pile
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Physics ,Nuclear and High Energy Physics ,Photon ,Optics ,law ,business.industry ,Free-electron laser ,Electrical engineering ,Particle accelerator ,business ,Instrumentation ,Linear particle accelerator ,law.invention - Abstract
The LCLS hard X-ray Free Electron Laser at SLAC reported first lasing in April 2009. Since then two successful user runs have been completed at the two soft X-ray stations. The first hard X-ray station has started commissioning in July 2010. Beam diagnostics play an essential role for tuning the machine and delivering the requested beam properties to the users. An overview of the LCLS photon diagnostics will be presented including some selected commissioning results. Plans for future improvements and upgrades will be briefly discussed.
- Published
- 2011
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49. Comparing different approaches to characterization of focused X-ray laser beams
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Pavel Boháček, Jacek Krzywinski, Stefan Moeller, M. Swiggers, Stefan P. Hau-Riege, Michael Rowen, Joshua J. Turner, P.A. Heimann, Libor Juha, Jaromir Chalupsky, Věra Hájková, William F. Schlotter, Marc Messerschmidt, and Bob Nagler
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Wavefront ,Physics ,Nuclear and High Energy Physics ,business.industry ,Laser ,Beam parameter product ,law.invention ,X-ray laser ,Optics ,law ,Rayleigh length ,Physics::Accelerator Physics ,Laser beam quality ,business ,Instrumentation ,Beam (structure) ,Coherence (physics) - Abstract
X-ray lasers represent a powerful tool to explore matter under extreme conditions. A rigorous characterization of their output parameters is, therefore, of substantial importance for the purposes of the experiments being conducted at these sources. A profound knowledge of the spatial, temporal, spectral, statistical, coherence, and wavefront beam properties may protect us from an unwanted misinterpretation of the experimental data. We present an experimental technique of the spatial (transverse and longitudinal) characterization of the beam profile. Investigating ablative imprints in various materials, we evaluate the spatial properties of the incident beam, namely, the beam waist radius and position, the Rayleigh range, M2 parameter, and divergence. In this paper, we recall briefly our recent work at the transverse beam profile reconstruction. A newly developed method of the longitudinal beam profile characterization is the main subject of this work.
- Published
- 2011
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- View/download PDF
50. The role of single element errors in planar parabolic compound refractive lenses
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Jacek Krzywinski, Masayoshi Itou, Yoshiharu Sakurai, and A. Andrejczuk
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Physics ,Nuclear and High Energy Physics ,Radiation ,Photon ,Geometrical optics ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,Monte Carlo method ,X-ray optics ,Ray tracing (physics) ,Transverse plane ,Planar ,Optics ,Gradient-index optics ,business ,Instrumentation - Abstract
The propagation of X-rays through a compound refractive lens (CRL) with imperfect CRL elements is investigated. The trajectories of random rays within the geometrical optics regime are calculated in one plane using Monte Carlo methods. Three different lenses were simulated: Be, Al and Ni lenses designed for photon energies of 20 keV, 60 keV and 175 keV, respectively. The results show that while transverse displacements of single elements in a CRL do not influence imaging resolution, rotational errors can be important. Systematic calculations of aberrations owing to the deviation of the element's surface from a perfect parabolic shape are also presented.
- Published
- 2010
- Full Text
- View/download PDF
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