28 results on '"James K. Ellis"'
Search Results
2. Intracellular Staphylococcus aureus Modulates Host Central Carbon Metabolism To Activate Autophagy
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Natalia Bravo-Santano, James K. Ellis, Luis M. Mateos, Yolanda Calle, Hector C. Keun, Volker Behrends, and Michal Letek
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Staphylococcus aureus ,autophagy ,host cell ,intracellular pathogen ,metabolism ,Microbiology ,QR1-502 - Abstract
ABSTRACT Staphylococcus aureus is a facultative intracellular pathogen that invades and replicates within many types of phagocytic and nonphagocytic cells. During intracellular infection, S. aureus is capable of subverting xenophagy and escaping to the cytosol of the host cell. Furthermore, drug-induced autophagy facilitates the intracellular replication of S. aureus, but the reasons behind this are unclear. Here, we have studied the host central carbon metabolism during S. aureus intracellular infection. We found extensive metabolic rerouting and detected several distinct metabolic changes that suggested starvation-induced autophagic flux in infected cells. These changes included increased uptake but lower intracellular levels of glucose and low abundance of several essential amino acids, as well as markedly upregulated glutaminolysis. Furthermore, we show that AMP-activated protein kinase (AMPK) and extracellular signal-regulated kinase (ERK) phosphorylation levels are significantly increased in infected cells. Interestingly, while autophagy was activated in response to S. aureus invasion, most of the autophagosomes detected in infected cells did not contain bacteria, suggesting that S. aureus induces the autophagic flux during cell invasion for energy generation and nutrient scavenging. Accordingly, AMPK inhibition halted S. aureus intracellular proliferation. IMPORTANCE Staphylococcus aureus escapes from immune recognition by invading a wide range of human cells. Once the pathogen becomes intracellular, the most important last resort antibiotics are not effective. Therefore, novel anti-infective therapies against intracellular S. aureus are urgently needed. Here, we have studied the physiological changes induced in the host cells by S. aureus during its intracellular proliferation. This is important, because the pathogen exploits the host cell’s metabolism for its own proliferation. We find that S. aureus severely depletes glucose and amino acid pools, which leads to increased breakdown of glutamine by the host cell in an attempt to meet its own metabolic needs. All of these metabolic changes activate autophagy in the host cell for nutrient scavenging and energy generation. The metabolic activation of autophagy could be used by the pathogen to sustain its own intracellular survival, making it an attractive target for novel anti-infectives.
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- 2018
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3. Intracellular Staphylococcus aureus Elicits the Production of Host Very Long-Chain Saturated Fatty Acids with Antimicrobial Activity
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Natalia Bravo-Santano, James K. Ellis, Yolanda Calle, Hector C. Keun, Volker Behrends, and Michal Letek
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intracellular infection ,lipids metabolism ,fatty acids ,antibacterial effect ,Staphylococcus aureus ,Microbiology ,QR1-502 - Abstract
As a facultative intracellular pathogen, Staphylococcus aureus is able to invade and proliferate within many types of mammalian cells. Intracellular bacterial replication relies on host nutrient supplies and, therefore, cell metabolism is closely bound to intracellular infection. Here, we investigated how S. aureus invasion affects the host membrane-bound fatty acids. We quantified the relative levels of fatty acids and their labelling pattern after intracellular infection by gas chromatography-mass spectrometry (GC-MS). Interestingly, we observed that the levels of three host fatty acids—docosanoic, eicosanoic and palmitic acids—were significantly increased in response to intracellular S. aureus infection. Accordingly, labelling carbon distribution was also affected in infected cells, in comparison to the uninfected control. In addition, treatment of HeLa cells with these three fatty acids showed a cytoprotective role by directly reducing S. aureus growth.
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- 2019
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4. miR-22-enriched breast cancer cells display repressed glycolytic metabolism, increased glycogen synthesis, and reduced survival in low glucose conditions
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Costas Koufaris, Margarita E Papandreou, James K Ellis, Vicky Nicolaidou, and Hector C Keun
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Genetics ,General Medicine ,Molecular Biology - Published
- 2023
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5. Supplementary Table 1 from Alterations of Choline Phospholipid Metabolism in Endometrial Cancer Are Caused by Choline Kinase Alpha Overexpression and a Hyperactivated Deacylation Pathway
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Rohini Sharma, Hector C. Keun, Eric O. Aboagye, Roberto Dina, James K. Ellis, David J. Pinato, Patrizia Lee, and Sebastian Trousil
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Supplementary Table 1 contains a list of all metabolic alterations detected in endometrial cancer.
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- 2023
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6. Data from Alterations of Choline Phospholipid Metabolism in Endometrial Cancer Are Caused by Choline Kinase Alpha Overexpression and a Hyperactivated Deacylation Pathway
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Rohini Sharma, Hector C. Keun, Eric O. Aboagye, Roberto Dina, James K. Ellis, David J. Pinato, Patrizia Lee, and Sebastian Trousil
- Abstract
Metabolic rearrangements subsequent to malignant transformation are not well characterized in endometrial cancer. Identification of altered metabolites could facilitate imaging-guided diagnosis, treatment surveillance, and help to identify new therapeutic options. Here, we used high-resolution magic angle spinning magnetic resonance mass spectroscopy on endometrial cancer surgical specimens and normal endometrial tissue to investigate the key modulators that might explain metabolic changes, incorporating additional investigations using qRT-PCR, Western blotting, tissue microarrays (TMA), and uptake assays of [3H]-labeled choline. Lipid metabolism was severely dysregulated in endometrial cancer with various amino acids, inositols, nucleobases, and glutathione also altered. Among the most important lipid-related alterations were increased phosphocholine levels (increased 70% in endometrial cancer). Mechanistic investigations revealed that changes were not due to altered choline transporter expression, but rather due to increased expression of choline kinase α (CHKA) and an activated deacylation pathway, as indicated by upregulated expression of the catabolic enzymes LYPLA1, LYPLA2, and GPCPD1. We confirmed the significance of CHKA overexpression on a TMA, including a large series of endometrial hyperplasia, atypical hyperplasia, and adenocarcinoma tissues, supporting a role for CHKA in malignant transformation. Finally, we documented several-fold increases in the uptake of [3H]choline in endometrial cancer cell lines compared with normal endometrial stromal cells. Our results validate deregulated choline biochemistry as an important source of noninvasive imaging biomarkers for endometrial cancer. Cancer Res; 74(23); 6867–77. ©2014 AACR.
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- 2023
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7. Consensus-Phenotype Integration of Transcriptomic and Metabolomic Data Implies a Role for Metabolism in the Chemosensitivity of Tumour Cells.
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Rachel Cavill, Atanas Kamburov, James K. Ellis, Toby J. Athersuch, Marcus S. C. Blagrove, Ralf Herwig, Timothy M. D. Ebbels, and Hector C. Keun
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- 2011
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8. Enhanced triacylglycerol catabolism by carboxylesterase 1 promotes aggressive colorectal carcinoma
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Zoltan Takats, Walter Stünkel, Thamil S Vaiyapuri, Kern Rei Chng, Yue Ma, Daniel D'Andrea, Vinay Tergaonkar, Federica Begalli, Gary Frost, Laura Goracci, James S. McKenzie, Hector C. Keun, Luca Savino, Daria Capece, James Kinross, Gabriele Cruciani, James L. Alexander, Katarzyna Broniowska, Guido Franzoso, Laura Tornatore, Maria Luisa Dória, James K. Ellis, Shi-Chi Leow, Alessandra Di Veroli, Jason Bennett, Sam E Mason, Daniela Verzella, Università degli Studi dell'Aquila = University of L'Aquila (UNIVAQ), Imperial College London, Università degli Studi di Perugia = University of Perugia (UNIPG), Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U 1192 (PRISM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lille-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille), INSERM, Université de Lille, Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U1192, Università degli Studi dell'Aquila = University of L'Aquila [UNIVAQ], and Università degli Studi di Perugia = University of Perugia [UNIPG]
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Male ,0301 basic medicine ,Enzymologic ,Colorectal cancer ,[SDV]Life Sciences [q-bio] ,Metabolism ,NF-kappaB ,Oncology ,Carboxylic Ester Hydrolases ,Colorectal Neoplasms ,Female ,Humans ,Neoplasm Proteins ,Triglycerides ,Gene Expression Regulation, Enzymologic ,Gene Expression Regulation, Neoplastic ,medicine.disease_cause ,ENERGY ,0302 clinical medicine ,Transcriptional regulation ,Medicine ,General Medicine ,CANCER ,030220 oncology & carcinogenesis ,OBESITY ,medicine.symptom ,METABOLIC ADAPTATION ,Research Article ,Carboxylesterase 1 ,Inflammation ,03 medical and health sciences ,LIPID-METABOLISM ,INFLAMMATION ,TUMORIGENESIS ,Transcription factor ,MESENCHYMAL TRANSITION ,Neoplastic ,business.industry ,Cancer ,medicine.disease ,TUMORIGENESIS OBESITY ENERGY ,digestive system diseases ,030104 developmental biology ,CELL-DEATH ,Gene Expression Regulation ,Cancer cell ,Cancer research ,business ,Carcinogenesis - Abstract
International audience; The ability to adapt to low-nutrient microenvironments is essential for tumor cell survival and progression in solid cancers, such as colorectal carcinoma (CRC). Signaling by the NF-kappaB transcription factor pathway associates with advanced disease stages and shorter survival in patients with CRC. NF-kappaB has been shown to drive tumor-promoting inflammation, cancer cell survival, and intestinal epithelial cell (IEC) dedifferentiation in mouse models of CRC. However, whether NF-kappaB affects the metabolic adaptations that fuel aggressive disease in patients with CRC is unknown. Here, we identified carboxylesterase 1 (CES1) as an essential NF-kappaB-regulated lipase linking obesity-associated inflammation with fat metabolism and adaptation to energy stress in aggressive CRC. CES1 promoted CRC cell survival via cell-autonomous mechanisms that fuel fatty acid oxidation (FAO) and prevent the toxic build-up of triacylglycerols. We found that elevated CES1 expression correlated with worse outcomes in overweight patients with CRC. Accordingly, NF-kappaB drove CES1 expression in CRC consensus molecular subtype 4 (CMS4), which is associated with obesity, stemness, and inflammation. CES1 was also upregulated by gene amplifications of its transcriptional regulator HNF4A in CMS2 tumors, reinforcing its clinical relevance as a driver of CRC. This subtype-based distribution and unfavorable prognostic correlation distinguished CES1 from other intracellular triacylglycerol lipases and suggest CES1 could provide a route to treat aggressive CRC.
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- 2021
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9. Extensive transcriptional and chromatin changes underlie astrocyte maturation in vivo and in culture
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François Guillemot, Nicolás Marichal, James I. MacRae, Benedikt Berninger, Stefan Boeing, Michael Lattke, James K. Ellis, Jerónimo Jurado-Arjona, and Robert J. Goldstone
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0301 basic medicine ,Male ,Molecular biology ,Cell Culture Techniques ,General Physics and Astronomy ,Gene Expression ,Epigenesis, Genetic ,0302 clinical medicine ,Chemical Biology & High Throughput ,Cerebral Cortex ,Multidisciplinary ,Stem Cells ,Genome Integrity & Repair ,Cell Differentiation ,Chromatin ,Cell biology ,medicine.anatomical_structure ,Chromatin Immunoprecipitation Sequencing ,Single-Cell Analysis ,Genetics & Genomics ,Astrocyte ,Model organisms ,Science ,Biology ,Biochemistry & Proteomics ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,Cellular neuroscience ,Developmental biology ,medicine ,Animals ,Gene ,Transcription factor ,Computational & Systems Biology ,FOS: Clinical medicine ,Neurosciences ,Development of the nervous system ,General Chemistry ,Cell Biology ,Tumour Biology ,In vitro ,Mice, Inbred C57BL ,030104 developmental biology ,Astrocytes ,030217 neurology & neurosurgery ,Homeostasis ,Transcription Factors ,Neuroscience - Abstract
Astrocytes have essential functions in brain homeostasis that are established late in differentiation, but the mechanisms underlying the functional maturation of astrocytes are not well understood. Here we identify extensive transcriptional changes that occur during murine astrocyte maturation in vivo that are accompanied by chromatin remodelling at enhancer elements. Investigating astrocyte maturation in a cell culture model revealed that in vitro-differentiated astrocytes lack expression of many mature astrocyte-specific genes, including genes for the transcription factors Rorb, Dbx2, Lhx2 and Fezf2. Forced expression of these factors in vitro induces distinct sets of mature astrocyte-specific transcripts. Culturing astrocytes in a three-dimensional matrix containing FGF2 induces expression of Rorb, Dbx2 and Lhx2 and improves astrocyte maturity based on transcriptional and chromatin profiles. Therefore, extrinsic signals orchestrate the expression of multiple intrinsic regulators, which in turn induce in a modular manner the transcriptional and chromatin changes underlying astrocyte maturation., Astrocytes have functions crucial for brain homeostasis, which are disrupted in many neurological disorders, but how these functions are established during astrocyte maturation is largely unknown. Here the authors show transcriptional and chromatin changes underlying astrocyte maturation in mice and identify transcription factors regulating maturation of cultured astrocytes.
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- 2020
10. High-performance vision training improves batting statistics for University of Cincinnati baseball players.
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Joseph F Clark, James K Ellis, Johnny Bench, Jane Khoury, and Pat Graman
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Medicine ,Science - Abstract
Baseball requires an incredible amount of visual acuity and eye-hand coordination, especially for the batters. The learning objective of this work is to observe that traditional vision training as part of injury prevention or conditioning can be added to a team's training schedule to improve some performance parameters such as batting and hitting.All players for the 2010 to 2011 season underwent normal preseason physicals and baseline testing that is standard for the University of Cincinnati Athletics Department. Standard vision training exercises were implemented 6 weeks before the start of the season. Results are reported as compared to the 2009 to 2010 season. Pre season conditioning was followed by a maintenance program during the season of vision training.The University of Cincinnati team batting average increased from 0.251 in 2010 to 0.285 in 2011 and the slugging percentage increased by 0.033. The rest of the Big East's slugging percentage fell over that same time frame 0.082. This produces a difference of 0.115 with 95% confidence interval (0.024, 0.206). As with the batting average, the change for University of Cincinnati is significantly different from the rest of the Big East (p = 0.02). Essentially all batting parameters improved by 10% or more. Similar differences were seen when restricting the analysis to games within the Big East conference.Vision training can combine traditional and technological methodologies to train the athletes' eyes and improve batting. Vision training as part of conditioning or injury prevention can be applied and may improve batting performance in college baseball players. High performance vision training can be instituted in the pre-season and maintained throughout the season to improve batting parameters.
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- 2012
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11. Analysis of Central and Peripheral Vision Reaction Times in Patients With Postconcussion Visual Dysfunction
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John M. Childress, Joseph F. Clark, James K. Ellis, Timothy M. Burns, and Jon G. Divine
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Adult ,Male ,medicine.medical_specialty ,Adolescent ,genetic structures ,Vision Disorders ,Physical Therapy, Sports Therapy and Rehabilitation ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,Physical medicine and rehabilitation ,Control data ,Reaction Time ,medicine ,Humans ,Orthopedics and Sports Medicine ,In patient ,Cognitive science ,Post-Concussion Syndrome ,business.industry ,030229 sport sciences ,Middle Aged ,eye diseases ,Case-Control Studies ,Athletic Injuries ,Peripheral vision ,Female ,business ,Visual dysfunction ,030217 neurology & neurosurgery - Abstract
To determine whether central and peripheral vision reaction times (PVRTs) are prolonged in patients with visual dysfunction after sustaining a concussion.Comparison of Dynavision D2 central and PVRTs in patients with postconcussion visual dysfunction were compared with control data from a normative patient database. Concussion patients without visual dysfunction were not included in this study.National Collegiate Athletic Association Division 1 college training room and university based, academic health center.Patients were selected for inclusion based on diagnosis of new visual dysfunction as indicated either by physical examination of the team physician or by patient self-report of symptoms. Patients included college athletes, college students, and concussion patient's presenting to a university based, academic health center.Measurement of central and PVRTs using a Dynavision D2 reaction time program were used as the dependent variables. Evaluations were conducted from 3 days to 11 months postconcussion, depending on the temporal development of visual symptoms after the concussion. No intervention was used.Average central and PVRTs for patients with postconcussion visual symptoms were compared with an asymptomatic control group with no history of concussion.Both central and PVRTs were significantly prolonged in patients with postconcussion visual symptoms compared with patients with no history of concussion.Central and PVRTs are both prolonged in patients with postconcussion visual dysfunction with PVRT being disproportionately prolonged. The percent change from central to PVRT was also increased in patients with postconcussion visual dysfunction.
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- 2017
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12. Identification of genomic biomarkers for anthracycline-induced cardiotoxicity in human iPSC-derived cardiomyocytes: an in vitro repeated exposure toxicity approach for safety assessment
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Vilas Wagh, Jochem Louisse, James K. Ellis, Sureshkumar Perumal Srinivasan, John Antonydas Gaspar, Agapios Sachinidis, Dimitry Spitkovski, Hector C. Keun, Harshal Nemade, Jan G. Hengstler, Filomain Nguemo, Susanne Bremer, Jürgen Hescheler, Umesh Chaudhari, and Commission of the European Communities
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0301 basic medicine ,Health, Toxicology and Mutagenesis ,Drug Evaluation, Preclinical ,Pharmacology ,Toxicology ,Biomarkers, Pharmacological ,Topoisomerase II Inhibitors ,Anthracyclines ,Myocytes, Cardiac ,Induced pluripotent stem cell ,Toxicity Tests, Chronic ,Cells, Cultured ,Oligonucleotide Array Sequence Analysis ,Antibiotics, Antineoplastic ,Reverse Transcriptase Polymerase Chain Reaction ,General Medicine ,In Vitro Systems ,medicine.drug ,Anthracycline ,Daunorubicin ,Induced Pluripotent Stem Cells ,Heart failure ,Biology ,Real-Time Polymerase Chain Reaction ,Cardiotoxins ,03 medical and health sciences ,medicine ,Humans ,Doxorubicin ,Transcriptomics ,Toxicologie ,VLAG ,Genomic biomarkers ,Mitoxantrone ,Cardiotoxicity ,In vitro test system ,Gene Expression Profiling ,Human stem cells derived cardiomyocytes ,Computational Biology ,Molecular Sequence Annotation ,Drugs, Investigational ,Gene expression profiling ,030104 developmental biology ,Ion homeostasis ,Gene Expression Regulation ,Safety assessment ,1115 Pharmacology And Pharmaceutical Sciences - Abstract
The currently available techniques for the safety evaluation of candidate drugs are usually cost-intensive and time-consuming and are often insufficient to predict human relevant cardiotoxicity. The purpose of this study was to develop an in vitro repeated exposure toxicity methodology allowing the identification of predictive genomics biomarkers of functional relevance for drug-induced cardiotoxicity in human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs). The hiPSC-CMs were incubated with 156 nM doxorubicin, which is a well-characterized cardiotoxicant, for 2 or 6 days followed by washout of the test compound and further incubation in compound-free culture medium until day 14 after the onset of exposure. An xCELLigence Real-Time Cell Analyser was used to monitor doxorubicin-induced cytotoxicity while also monitoring functional alterations of cardiomyocytes by counting of the beating frequency of cardiomyocytes. Unlike single exposure, repeated doxorubicin exposure resulted in long-term arrhythmic beating in hiPSC-CMs accompanied by significant cytotoxicity. Global gene expression changes were studied using microarrays and bioinformatics tools. Analysis of the transcriptomic data revealed early expression signatures of genes involved in formation of sarcomeric structures, regulation of ion homeostasis and induction of apoptosis. Eighty-four significantly deregulated genes related to cardiac functions, stress and apoptosis were validated using real-time PCR. The expression of the 84 genes was further studied by real-time PCR in hiPSC-CMs incubated with daunorubicin and mitoxantrone, further anthracycline family members that are also known to induce cardiotoxicity. A panel of 35 genes was deregulated by all three anthracycline family members and can therefore be expected to predict the cardiotoxicity of compounds acting by similar mechanisms as doxorubicin, daunorubicin or mitoxantrone. The identified gene panel can be applied in the safety assessment of novel drug candidates as well as available therapeutics to identify compounds that may cause cardiotoxicity. Electronic supplementary material The online version of this article (doi:10.1007/s00204-015-1623-5) contains supplementary material, which is available to authorized users.
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- 2016
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13. Systematic integration of molecular profiles identifies miR-22 as a regulator of lipid and folate metabolism in breast cancer cells
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Costas Koufaris, Hector C. Keun, C-He Lau, James K. Ellis, Y Pomyen, Gabriel N. Valbuena, Adrian Benito, Ekaterina Nevedomskaya, Gregory D. Tredwell, T Yang, and Cancer Research UK
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0301 basic medicine ,Cancer Research ,ATP citrate lyase ,Cellular differentiation ,Regulator ,Down-Regulation ,Breast Neoplasms ,Biology ,Bioinformatics ,03 medical and health sciences ,Folic Acid ,microRNA ,Genetics ,Metabolome ,Humans ,Oncology & Carcinogenesis ,Molecular Biology ,Gene targeting ,1103 Clinical Sciences ,Lipid metabolism ,Lipid Metabolism ,Phenotype ,3. Good health ,MicroRNAs ,030104 developmental biology ,MCF-7 Cells ,Cancer research ,Female ,1112 Oncology And Carcinogenesis - Abstract
Dysregulated microRNA (miRNA) mediate malignant phenotypes, including metabolic reprogramming. By performing an integrative analysis of miRNA and metabolome data for the NCI-60 cell line panel, we identified an miRNA cluster strongly associated with both c-Myc expression and global metabolic variation. Within this cluster the cancer-associated and cardioprotective miR-22 was shown to repress fatty acid synthesis and elongation in tumour cells by targeting ATP citrate lyase and fatty acid elongase 6, as well as impairing mitochondrial one-carbon metabolism by suppression of methylene tetrahydrofolate dehydrogenase/cyclohydrolase. Across several data sets, expression of these target genes were associated with poorer outcomes in breast cancer patients. Importantly, a beneficial effect of miR-22 on clinical outcomes in breast cancer was shown to depend on the expression levels of the identified target genes, demonstrating the relevance of miRNA/mRNA interactions to disease progression in vivo. Our systematic analysis establishes miR-22 as a novel regulator of tumour cell metabolism, a function that could contribute to the role of this miRNA in cellular differentiation and cancer development. Moreover, we provide a paradigmatic example of effect modification in outcome analysis as a consequence of miRNA-directed gene targeting, a phenomenon that could be exploited to improve patient prognosis and treatment.
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- 2015
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14. Metabolite signatures of doxorubicin induced toxicity in human induced pluripotent stem cell-derived cardiomyocytes
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Harshal Nemade, Umesh Chaudhari, Hector C. Keun, Agapios Sachinidis, Jürgen Hescheler, James K. Ellis, and Vilas Wagh
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0301 basic medicine ,Biochemistry & Molecular Biology ,Time Factors ,Formates ,Metabolite ,Proton Magnetic Resonance Spectroscopy ,Clinical Biochemistry ,Induced Pluripotent Stem Cells ,030204 cardiovascular system & hematology ,Pharmacology ,Biology ,Biochemistry ,Cardiotoxins ,Biomarkers, Pharmacological ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Adenosine Triphosphate ,Pluripotent stem cells ,Lactate dehydrogenase ,Pyruvic Acid ,Extracellular ,medicine ,1101 Medical Biochemistry And Metabolomics ,Humans ,Metabolomics ,Doxorubicin ,Myocytes, Cardiac ,Induced pluripotent stem cell ,Cytotoxicity ,Toxicity prediction ,Cells, Cultured ,1H NMR metabolomics ,Acetic Acid ,Cardiomyocytes ,Cardiotoxicity ,L-Lactate Dehydrogenase ,Metabolite biomarkers ,Organic Chemistry ,Cell Differentiation ,0304 Medicinal And Biomolecular Chemistry ,030104 developmental biology ,chemistry ,Toxicity ,Metabolome ,Original Article ,medicine.drug - Abstract
Drug-induced off-target cardiotoxicity, particularly following anti-cancer therapy, is a major concern in new drug discovery and development. To ensure patient safety and efficient pharmaceutical drug development, there is an urgent need to develop more predictive cell model systems and distinct toxicity signatures. In this study, we applied our previously proposed repeated exposure toxicity methodology and performed (1)H NMR spectroscopy-based extracellular metabolic profiling in culture medium of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) exposed to doxorubicin (DOX), an anti-cancer agent. Single exposure to DOX did not show alteration in the basal level of extracellular metabolites while repeated exposure to DOX caused reduction in the utilization of pyruvate and acetate, and accumulation of formate compared to control culture medium. During drug washout, only pyruvate showed reversible effect and restored its utilization by hiPSC-CMs. On the other hand, formate and acetate showed irreversible effect in response to DOX exposure. DOX repeated exposure increased release of lactate dehydrogenase (LDH) in culture medium suggesting cytotoxicity events, while declined ATP levels in hiPSC-CMs. Our data suggests DOX perturbed mitochondrial metabolism in hiPSC-CMs. Pyruvate, acetate and formate can be used as metabolite signatures of DOX induced cardiotoxicity. Moreover, the hiPSC-CMs model system coupled with metabolomics technology offers a novel and powerful approach to strengthen cardiac safety assessment during new drug discovery and development.
- Published
- 2017
15. Metabolomic characterisation of the effects of oncogenic PIK3CA transformation in a breast epithelial cell line
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Chung-Ho E. Lau, Gregory D. Tredwell, James K. Ellis, Eric W.-F. Lam, Hector C. Keun, and Medical Research Council (MRC)
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AEROBIC GLYCOLYSIS ,Carcinogenesis ,Class I Phosphatidylinositol 3-Kinases ,Proton Magnetic Resonance Spectroscopy ,Citric Acid Cycle ,Glutamic Acid ,Breast Neoplasms ,Models, Biological ,Article ,GLUCOSE ,PATHWAY ,Cell Line, Tumor ,KINASE ,Humans ,Metabolomics ,CANCER-CELLS ,Pyruvates ,Science & Technology ,PYRUVATE-DEHYDROGENASE ,Epithelial Cells ,Glycerylphosphorylcholine ,Lipids ,CHOLINE PHOSPHOLIPID-METABOLISM ,INSULIN ,Multidisciplinary Sciences ,Mutation ,Metabolome ,Science & Technology - Other Topics ,Female ,FATTY-ACIDS ,CLINICAL-TRIALS - Abstract
Somatic mutations in PIK3CA are frequently found in a number of human cancers, including breast cancer, altering cellular physiology and tumour sensitivity to chemotherapy. This renders PIK3CA an attractive molecular target for early detection and personalised therapy. Using 1H Nuclear Magnetic Resonance spectroscopy (NMR) and Gas Chromatography – Mass Spectrometery (GC-MS) together with 13C stable isotope-labelled glucose and glutamine as metabolic tracers, we probed the phenotypic changes in metabolism following a single copy knock-in of mutant PIK3CA (H1047R) in the MCF10A cell line, an important cell model for studying oncogenic transformation in breast tissues. We observed effects in several metabolic pathways, including a decrease in glycerophosphocholine level together with increases in glutaminolysis, de novo fatty acid synthesis and pyruvate entry into the tricarboxylic acid cycle. Our findings highlight altered glyceroplipid metabolism and lipogenesis, as key metabolic phenotypes of mutant PIK3CA transformation that are recapitulated in the MCF10A cellular model.
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- 2017
16. Alterations of Choline Phospholipid Metabolism in Endometrial Cancer Are Caused by Choline Kinase Alpha Overexpression and a Hyperactivated Deacylation Pathway
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Patrizia Lee, Eric O. Aboagye, Rohini Sharma, Hector C. Keun, David J. Pinato, Roberto Dina, James K. Ellis, and Sebastian Trousil
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Cancer Research ,medicine.medical_specialty ,Choline kinase ,Phosphorylcholine ,Choline kinase alpha ,Adenocarcinoma ,Biology ,Cell Line ,Choline ,Malignant transformation ,chemistry.chemical_compound ,Cell Line, Tumor ,Internal medicine ,medicine ,Choline Kinase ,Humans ,Phospholipids ,Phosphocholine ,Hyperplasia ,Endometrial cancer ,Middle Aged ,Lipid Metabolism ,medicine.disease ,Endometrial Neoplasms ,Endometrial hyperplasia ,Choline transporter ,Endocrinology ,Oncology ,chemistry ,Phospholipases ,Cancer research ,Female ,Thiolester Hydrolases ,Signal Transduction - Abstract
Metabolic rearrangements subsequent to malignant transformation are not well characterized in endometrial cancer. Identification of altered metabolites could facilitate imaging-guided diagnosis, treatment surveillance, and help to identify new therapeutic options. Here, we used high-resolution magic angle spinning magnetic resonance mass spectroscopy on endometrial cancer surgical specimens and normal endometrial tissue to investigate the key modulators that might explain metabolic changes, incorporating additional investigations using qRT-PCR, Western blotting, tissue microarrays (TMA), and uptake assays of [3H]-labeled choline. Lipid metabolism was severely dysregulated in endometrial cancer with various amino acids, inositols, nucleobases, and glutathione also altered. Among the most important lipid-related alterations were increased phosphocholine levels (increased 70% in endometrial cancer). Mechanistic investigations revealed that changes were not due to altered choline transporter expression, but rather due to increased expression of choline kinase α (CHKA) and an activated deacylation pathway, as indicated by upregulated expression of the catabolic enzymes LYPLA1, LYPLA2, and GPCPD1. We confirmed the significance of CHKA overexpression on a TMA, including a large series of endometrial hyperplasia, atypical hyperplasia, and adenocarcinoma tissues, supporting a role for CHKA in malignant transformation. Finally, we documented several-fold increases in the uptake of [3H]choline in endometrial cancer cell lines compared with normal endometrial stromal cells. Our results validate deregulated choline biochemistry as an important source of noninvasive imaging biomarkers for endometrial cancer. Cancer Res; 74(23); 6867–77. ©2014 AACR.
- Published
- 2014
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17. Visual Evoked Potential and Voltage Changes Associated with Acute Concussion and Frequency Specific Photophobia
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James K. Ellis, Robert E. Mangine, Kimberly A. Hasselfeld, Joseph F. Clark, Bradley S. Jacobs, Bret Betz, Angelo J. Colosimo, and Jon G. Divine
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medicine.medical_specialty ,education.field_of_study ,Concussion management ,Visual perception ,genetic structures ,Photophobia ,Traumatic brain injury ,business.industry ,Population ,Audiology ,medicine.disease ,Symptom relief ,Concussion ,medicine ,Neurology (clinical) ,medicine.symptom ,Evoked potential ,education ,business - Abstract
ObjectiveIn this paper we present a case series of concussion patients' VEP as well as a single concussion patient with a VEP baseline and post concussion VEP data.BackgroundVisual Evoked Potentials (VEP) are a means of measuring the electrical behavior of the brain following a visual stimuli. The use of VEP for diagnostics following traumatic brain injury (TBI) is emerging with additional data concerning sports related concussion coming.Design/MethodsDuring the 2016 spring football season there was 1 concussion of a subject who had a VEP baseline and a VEP performed during the acute phase of the concussion. Concurrently we have been using VEP for concussion patients who have not had a baseline. Fifteen subjects in the post acute phase; while symptomatic, had VEP performed using White, Red, Blue and Green for the evoked potentials.ResultsThe patient with a VEP baseline had increased voltages with subtle slowing of N75 and P100. N75 increased from 67.5 msec at baseline to 75.1 msec post concussion. Voltages went from 19.3 mVolts to 24.6 mVolts post concussion. Also, the colored flashes associated with the lowest voltages were consistent with mitigation of frequency specific photophobia; 20.9 mVolts for mitigation color compared (red) to 24.6 for white. In the concussion population studied (N = 15) the voltages where the color corresponded to symptom relief were: 10.9 ± 5.7 mVolts compared to symptom evoking voltages 12.7 ± 6.3 (p = 0.0031) mVolts.ConclusionsIn this paper we present evidence of VEP changes in one acute concussion patient as well as a population of concussion patients where voltages are increased post concussion. The increased voltages associated with color VEP may be a useful technique to assess frequency specific photophobia as well as helping manage post concussion photophobia. Futures studies to assess the utility of VEP as a concussion management tool are needed.
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- 2019
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18. Choline-releasing glycerophosphodiesterase EDI3 drives tumor cell migration and metastasis
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Berno Tanner, Christian Hedberg, Juergen Schiller, Hector C. Keun, Eric Steiner, Ekkehart Lausch, Gerd Schmitz, Chung-Ho E Lau, Joanna Stewart, James K. Ellis, Mandy Eibisch, Jens Sagemueller, Michaela S. Lesjak, Jalid Sehouli, Jan G. Hengstler, Roland Hergenroeder, Herbert Waldmann, Joerg Lambert, Rosemarie Marchan, and Hagen Staude
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medicine.medical_specialty ,Protein Kinase C-alpha ,Breast Neoplasms ,Biology ,Metastasis ,Choline ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Cell Movement ,Internal medicine ,Cell Line, Tumor ,Lysophosphatidic acid ,medicine ,Animals ,Humans ,Letters ,glycerophosphodiester phosphodiesterase domain containing 6 ,glycerophosphocholine phosphodiesterase GDE1 homolog (Saccharomyces cerevisiae) ,lysophosphatidic acid ,glycerophosphodiesterase 5 ,phosphatidic acid ,Tumor metabolome ,030304 developmental biology ,Phosphocholine ,Ovarian Neoplasms ,0303 health sciences ,Multidisciplinary ,Phosphoric Diester Hydrolases ,Cancer ,Cell migration ,medicine.disease ,3. Good health ,Endometrial Neoplasms ,Mice, Inbred C57BL ,Endocrinology ,chemistry ,Phospholipases ,030220 oncology & carcinogenesis ,Cancer research ,Female ,Signal transduction ,Signal Transduction - Abstract
Metastasis from primary tumors remains a major problem for tumor therapy. In the search for markers of metastasis and more effective therapies, the tumor metabolome is relevant because of its importance to the malignant phenotype and metastatic capacity of tumor cells. Altered choline metabolism is a hallmark of cancer. More specifically, a decreased glycerophosphocholine (GPC) to phosphocholine (PC) ratio was reported in breast, ovarian, and prostate cancers. Improved strategies to exploit this altered choline metabolism are therefore required. However, the critical enzyme cleaving GPC to produce choline, the initial step in the pathway controlling the GPC/PC ratio, remained unknown. In the present work, we have identified the enzyme, here named EDI3 (endometrial differential 3). Purified recombinant EDI3 protein cleaves GPC to form glycerol-3-phosphate and choline. Silencing EDI3 in MCF-7 cells decreased this enzymatic activity, increased the intracellular GPC/PC ratio, and decreased downstream lipid metabolites. Downregulating EDI3 activity inhibited cell migration via disruption of the PKCα signaling pathway, with stable overexpression of EDI3 showing the opposite effect. EDI3 was originally identified in our screening study comparing mRNA levels in metastasizing and nonmetastasizing endometrial carcinomas. Both Kaplan–Meier and multivariate analyses revealed a negative association between high EDI3 expression and relapse-free survival time in both endometrial ( P < 0.001) and ovarian ( P = 0.029) cancers. Overall, we have identified EDI3, a key enzyme controlling GPC and choline metabolism. Because inhibition of EDI3 activity corrects the GPC/PC ratio and decreases the migration capacity of tumor cells, it represents a possible target for therapeutic intervention.
- Published
- 2012
- Full Text
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19. Metabolic response to low-level toxicant exposure in a novel renal tubule epithelial cell system
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Craig Slattery, Hector C. Keun, Timothy M. D. Ebbels, James K. Ellis, Michael P. Ryan, Toby J. Athersuch, Tara McMorrow, Rachel Cavill, Paul Jennings, Robert J. Radford, Molecular and Computational Toxicology, AIMMS, Toxicogenomics, RS: GROW - School for Oncology and Reproduction, and RS: FSE DACS
- Subjects
Diclofenac ,Magnetic Resonance Spectroscopy ,Nifedipine ,Metabolite ,Pharmacology ,Biology ,Research Support ,Fluorescence ,Cell Line ,chemistry.chemical_compound ,Metabolomics ,SDG 3 - Good Health and Well-being ,Toxicity Tests ,Metabolome ,Journal Article ,Humans ,Mannitol ,Non-U.S. Gov't ,Molecular Biology ,Methylurea Compounds ,Microscopy ,Principal Component Analysis ,Bromates ,Research Support, Non-U.S. Gov't ,Epithelial Cells ,Ochratoxins ,Fold change ,Kidney Tubules ,chemistry ,Microscopy, Fluorescence ,Cell culture ,Toxicity ,Environmental Pollutants ,Intracellular ,Biotechnology ,Toxicant - Abstract
Toxicity testing is vital to protect human health from exposure to toxic chemicals in the environment. Furthermore, combining novel cellular models with molecular profiling technologies, such as metabolomics can add new insight into the molecular basis of toxicity and provide a rich source of biomarkers that are urgently required in a 21st Century approach to toxicology. We have used an NMR-based metabolic profiling approach to characterise for the first time the metabolome of the RPTEC/TERT1 cell line, an immortalised non-tumour human renal epithelial cell line that recapitulates phenotypic characteristics that are absent in other in vitro renal cell models. RPTEC/TERT1 cells were cultured with either the dosing vehicle (DMSO) or with exposure to one of six compounds (nifedipine, potassium bromate, monuron, D-mannitol, ochratoxin A and sodium diclofenac), several of which are known to cause renal effects. Aqueous intracellular and culture media metabolites were profiled by (1)H NMR spectroscopy at 6, 24 and 72 hours of exposure to a low effect dose (IC(10)). We defined the metabolome of the RPTEC/TERT1 cell line and used a principal component analysis approach to derive a panel of key metabolites, which were altered by chemical exposure. By considering only major changes (±1.5 fold change from control) across this metabolite panel we were able to show specific alterations to cellular processes associated with chemical treatment. Our findings suggest that metabolic profiling of RPTEC/TERT1 cells can report on the effect of chemical exposure on multiple cellular pathways at low-level exposure, producing different response profiles for the different compounds tested with a greater number of major metabolic effects observed in the toxin treated cells. Importantly, compounds with established links to chronic renal toxicity produced more diverse and severe perturbations to the cellular metabolome than non-toxic compounds in this model. As these changes can be rationalised with the different pharmacological and toxicity profiles of the chemicals it is suggested that metabolic profiling in the RPTEC/TERT1 model would be useful in investigating the mechanism of action of toxins at a low dose.
- Published
- 2011
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20. Vision Training Methods for Sports Concussion Mitigation and Management
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Patricia Graman, Hagar Elgendy, James K. Ellis, Gregory D. Myer, Angelo J. Colosimo, Kimberly A. Hasselfeld, Jon G. Divine, Joseph F. Clark, Robert E. Mangine, and Benjamin Bixenmann
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medicine.medical_specialty ,genetic structures ,medicine.medical_treatment ,General Chemical Engineering ,education ,General Biochemistry, Genetics and Molecular Biology ,Physical medicine and rehabilitation ,Intervention (counseling) ,Concussion ,Saccades ,medicine ,Humans ,Students ,Brain Concussion ,Vision, Ocular ,Behavior ,Rehabilitation ,biology ,General Immunology and Microbiology ,Athletes ,General Neuroscience ,medicine.disease ,biology.organism_classification ,eye diseases ,Test (assessment) ,Stereopsis ,Athletic Injuries ,Peripheral vision ,Sport management ,Psychology ,Sports - Abstract
There is emerging evidence supporting the use vision training, including light board training tools, as a concussion baseline and neuro-diagnostic tool and potentially as a supportive component to concussion prevention strategies. This paper is focused on providing detailed methods for select vision training tools and reporting normative data for comparison when vision training is a part of a sports management program. The overall program includes standard vision training methods including tachistoscope, Brock’s string, and strobe glasses, as well as specialized light board training algorithms. Stereopsis is measured as a means to monitor vision training affects. In addition, quantitative results for vision training methods as well as baseline and post-testing *A and Reaction Test measures with progressive scores are reported. Collegiate athletes consistently improve after six weeks of training in their stereopsis, *A and Reaction Test scores. When vision training is initiated as a team wide exercise, the incidence of concussion decreases in players who participate in training compared to players who do not receive the vision training. Vision training produces functional and performance changes that, when monitored, can be used to assess the success of the vision training and can be initiated as part of a sports medical intervention for concussion prevention.
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- 2015
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21. Aggressive Rehabilitation Pathway Targeting Concussion Symptoms: Illustration with a Case Study
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Andrew Middendorf, Kimberly A. Hasselfeld, James K. Ellis, Joseph F. Clark, and Jon G. Divine
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medicine.medical_specialty ,Rehabilitation ,Post-concussion syndrome ,Traumatic brain injury ,business.industry ,medicine.medical_treatment ,Cognition ,Rivermead post-concussion symptoms questionnaire ,medicine.disease ,Quality of life ,Intervention (counseling) ,Concussion ,medicine ,Physical therapy ,business ,General Economics, Econometrics and Finance - Abstract
We present an aggressive rehabilitation program that addresses specific post-concussion symptoms for patients with a mild traumatic brain injury (mTBI). Our pathway is illustrated by our report of a 38-year-old female who was injured during a wind storm as a result of a direct blow to the left temporal area. In the fourth month following her injury, she was diagnosed with a right-sided central and peripheral vestibular neuropathy. She had cognitive difficulties and consistently poor multitasking abilities. After five months of brain rest and incomplete resolution of symptoms, she was referred to our program. A comprehensive rehabilitative program, including patient specific goals, was initiated to address the multiple deficiencies and symptoms to improve her quality of life (QOL). The program utilized a multidisciplinary team approach including instructing the patient on “feel better” and “get better” strategies. The patient’s progress and symptoms were continuously monitored, addressed, and targeted. Progression of activity was based upon achievement of multiple symptom-regulated goals. The program also included training cognitive function under physical stresses to return her to her pre-injury high-level of function and activity. Approximately 11 months following the concussive event she was discharged and placed on a long term maintenance program, as her QOL was essentially normal. As is typical with mTBIs, the recovery in this case was not linear and rehabilitation often evoked symptoms, but the concussion management team closely managed and addressed the symptoms. One particular intervention, the adjustment of visual acuity to 20/30 instead of 20/15, was particularly effective in reducing symptoms triggered by vision corrections. A focused, personalized rehabilitation program that targets the symptoms of a concussion helps identify and resolve concussion symptoms. This philosophy is based on traditional sports medical rehabilitation methods that first assess an injury and then work to strengthen weaknesses.
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- 2014
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22. A Combination of Transcriptomics and Metabolomics Uncovers Enhanced Bile Acid Biosynthesis in HepG2 Cells Expressing CCAAT/Enhancer-Binding Protein beta (C/EBP beta), Hepatocyte Nuclear Factor 4 alpha (HNF4 alpha), and Constitutive Androstane Receptor (CAR)
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Hector C. Keun, Timothy M. D. Ebbels, José V. Castell, Agustín Lahoz, Marina Blazquez, Aitor Carretero, Roque Bort, Rachel Cavill, James K. Ellis, Toby J. Athersuch, Toxicogenomics, RS: GROW - School for Oncology and Reproduction, and RS: FSE DACS
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HepG2 ,Magnetic Resonance Spectroscopy ,medicine.drug_class ,Genetic Vectors ,Gene Expression ,Receptors, Cytoplasmic and Nuclear ,Biology ,Transfection ,Biochemistry ,Models, Biological ,HNF4 ,Adenoviridae ,chemistry.chemical_compound ,NMR spectroscopy ,Valine ,Acetyl Coenzyme A ,Chenodeoxycholic acid ,Constitutive androstane receptor ,medicine ,Humans ,metabonomics ,Amino Acids ,Constitutive Androstane Receptor ,bile acids ,Bile acid ,CCAAT-Enhancer-Binding Protein-beta ,Gene Expression Profiling ,hepatic model ,General Chemistry ,Hep G2 Cells ,C/EBP ,G protein-coupled bile acid receptor ,metabolomics ,CAR ,Hepatocyte nuclear factors ,chemistry ,Hepatocyte nuclear factor 4 ,Hepatocyte Nuclear Factor 4 ,chenodeoxycholic acid ,CDCA ,CYP8B1 - Abstract
The development of hepatoma-based in vitro models to study hepatocyte physiology is an invaluable tool for both industry and academia. Here, we develop an in vitro model based on the HepG2 cell line that produces chenodeoxycholic acid, the main bile acid in humans, in amounts comparable to human hepatocytes. A combination of adenoviral transfections for CCAAT/enhancer-binding protein beta (C/EBP beta), hepatocyte nuclear factor 4 alpha (HNF4 alpha), and constitutive androstane receptor (CAR) decreased intracellular glutamate, succinate, leucine, and valine levels in HepG2 cells, suggestive of a switch to catabolism to increase lipogenic acetyl CoA and increased anaplerosis to replenish the tricarboxylic acid cycle. Transcripts of key genes involved in bile acid synthesis were significantly induced by approximately 160-fold. Consistently, chenodeoxycholic acid production rate was increased by more than 20-fold. Comparison between mRNA and bile acid levels suggest that 12-alpha hydroxylation of 7-alpha-hydroxy-4-cholesten-3-one is the limiting step in cholic acid synthesis in HepG2 cells. These data reveal that introduction of three hepatocyte-related transcription factors enhance anabolic reactions in HepG2 cells and provide a suitable model to study bile acid biosynthesis under pathophysiological conditions.
- Published
- 2013
23. Proteomic and metabolomic responses to connexin43 silencing in primary hepatocyte cultures
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Erwin Witters, Elke Decrock, Tamara Vanhaecke, Vera Rogiers, André G. Oliveira, Maria Lúcia Zaidan Dagli, Hector C. Keun, Kris Gevaert, Bruno Cogliati, Timothy M. D. Ebbels, Gustavo B. Menezes, An Staes, Luc Leybaert, Michaël Maes, Dirk Valkenborg, James K. Ellis, Mathieu Vinken, Rachel Cavill, Toxicology, Dermato-cosmetology and Pharmacognosy, Experimental in vitro toxicology and dermato-cosmetology, Toxicogenomics, RS: GROW - School for Oncology and Reproduction, and RS: FSE DACS
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Male ,connexin ,Health, Toxicology and Mutagenesis ,Connexin ,Mitochondria, Liver ,Biology ,Mitochondrion ,Toxicology ,Proteomics ,primary hepatocyte culture ,Rats, Sprague-Dawley ,proteomics ,Tandem Mass Spectrometry ,RNA interference ,Heat shock protein ,Animals, Outbred Strains ,Metabolome ,Animals ,Connexin43 ,Metabolomics ,Gene Silencing ,RNA, Small Interfering ,Nuclear Magnetic Resonance, Biomolecular ,Cells, Cultured ,Pharmacology. Therapy ,General Medicine ,PROTEÍNAS ,Primary hepatocyte ,Rats ,Cell biology ,Biochemistry ,Connexin 43 ,Proteome ,Hepatocytes ,cardiovascular system ,RNA Interference ,Signal transduction ,Biomarkers ,Signal Transduction - Abstract
Freshly established cultures of primary hepatocytes progressively adopt a foetal-like phenotype and display increased production of connexin43. The latter is a multifaceted cellular entity with variable subcellular locations, including the mitochondrial compartment. Cx43 forms hemichannels and gap junctions that are involved in a plethora of physiological and pathological processes, such as apoptosis. The present study was conducted with the goal of shedding more light onto the role of connexin43 in primary hepatocyte cultures. Connexin43 expression was suppressed by means of RNA interference technology, and the overall outcome of this treatment on the hepatocellular proteome and metabolome was investigated using tandem mass tag-based differential protein profiling and 1H NMR spectroscopy, respectively. Global protein profiling revealed a number of targets of the connexin43 knock-down procedure, including mitochondrial proteins (heat shock protein 60, glucose-regulated protein 75, thiosulphate sulphurtransferase and adenosine triphosphate synthase) and detoxifying enzymes (glutathione S-transferase μ 2 and cytochrome P450 2C70). At the metabolomic level, connexin43 silencing caused no overt changes, though there was some evidence for a subtle increase in intracellular glycine quantities. Collectively, these data could further substantiate the established existence of a mitochondrial connexin pool and could be reconciled with the previously reported involvement of connexin43 signalling in spontaneously occurring apoptosis in primary hepatocyte cultures.
- Published
- 2013
24. High-performance vision training improves batting statistics for University of Cincinnati baseball players
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Johnny Bench, James K. Ellis, Pat Graman, Joseph F. Clark, and Jane C. Khoury
- Subjects
Anatomy and Physiology ,Cognitive Neuroscience ,Visual Acuity ,lcsh:Medicine ,Baseball ,Neurological System ,03 medical and health sciences ,Ocular physiology ,0302 clinical medicine ,Time frame ,Injury prevention ,Humans ,Operations management ,Batting average ,Sports and Exercise Medicine ,lcsh:Science ,Biology ,Vision, Ocular ,Ohio ,Computational Neuroscience ,Multidisciplinary ,biology ,Athletes ,lcsh:R ,Training (meteorology) ,Computational Biology ,030229 sport sciences ,Baseline testing ,biology.organism_classification ,Sensory Systems ,Schedule (workplace) ,Ophthalmology ,Neurology ,030221 ophthalmology & optometry ,Medicine ,Surgery ,lcsh:Q ,Psychomotor Performance ,Research Article ,Neuroscience - Abstract
Purpose Baseball requires an incredible amount of visual acuity and eye-hand coordination, especially for the batters. The learning objective of this work is to observe that traditional vision training as part of injury prevention or conditioning can be added to a team's training schedule to improve some performance parameters such as batting and hitting. Methods All players for the 2010 to 2011 season underwent normal preseason physicals and baseline testing that is standard for the University of Cincinnati Athletics Department. Standard vision training exercises were implemented 6 weeks before the start of the season. Results are reported as compared to the 2009 to 2010 season. Pre season conditioning was followed by a maintenance program during the season of vision training. Results The University of Cincinnati team batting average increased from 0.251 in 2010 to 0.285 in 2011 and the slugging percentage increased by 0.033. The rest of the Big East's slugging percentage fell over that same time frame 0.082. This produces a difference of 0.115 with 95% confidence interval (0.024, 0.206). As with the batting average, the change for University of Cincinnati is significantly different from the rest of the Big East (p = 0.02). Essentially all batting parameters improved by 10% or more. Similar differences were seen when restricting the analysis to games within the Big East conference. Conclusion Vision training can combine traditional and technological methodologies to train the athletes' eyes and improve batting. Vision training as part of conditioning or injury prevention can be applied and may improve batting performance in college baseball players. High performance vision training can be instituted in the pre-season and maintained throughout the season to improve batting parameters.
- Published
- 2012
25. Transhiatal and transthoracic esophagectomy: A comparative study
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James K. Ellis, Armando Sardi, John C. Bowen, and John S. Bolton
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Male ,medicine.medical_specialty ,Esophageal Neoplasms ,medicine.medical_treatment ,Diaphragm ,Transthoracic esophagectomy ,law.invention ,law ,Tumor stage ,medicine ,Humans ,Esophagus ,Aged ,Retrospective Studies ,Laparotomy ,business.industry ,Esophageal disease ,Operative mortality ,General Medicine ,Length of Stay ,Middle Aged ,Esophageal cancer ,medicine.disease ,Survival Analysis ,Intensive care unit ,Surgery ,Esophagectomy ,medicine.anatomical_structure ,Thoracotomy ,Oncology ,Multivariate Analysis ,Female ,business - Abstract
From January 1981 to December 1990, 55 consecutive patients underwent esophageal resection by either the transhiatal (THE, 26 patients) or transthoracic (TTE, 29 patients) approach. Patient age, tumor size, and tumor stage were similar in the two groups. THE patients had a significantly worse mean preoperative American Society of Anesthesiologists (ASA) risk class assigned by the anesthesiologist. Patients who underwent THE had a significantly lower operative mortality and rate of cardiopulmonary complications, significantly shorter intensive care unit and hospital length of stay, and a significantly better postoperative survival when operative deaths are included in the analysis. Operative deaths in the TTE group were concentrated among patients65 years of age (4 of 9 died), in an ASA risk classor = III (3 of 7 died) or with moderate or severe cardiac or pulmonary impairment preoperatively (4 of 6 died).
- Published
- 1992
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26. Effect of the histone deacetylase inhibitor trichostatin a on the metabolome of cultured primary hepatocytes
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Hector C. Keun, Tamara Vanhaecke, Timothy M. D. Ebbels, Vera Rogiers, Tatyana Y. Doktorova, Toby J. Athersuch, James K. Ellis, Jeremy K. Nicholson, Rachel Cavill, Pui Hei Chan, and Mathieu Vinken
- Subjects
Primary (chemistry) ,medicine.drug_class ,organic chemicals ,Histone deacetylase inhibitor ,General Chemistry ,Biology ,Hydroxamic Acids ,Biochemistry ,Molecular biology ,Histone Deacetylases ,Rats ,Histone Deacetylase Inhibitors ,Trichostatin A ,Cancer cell ,Multivariate Analysis ,medicine ,Metabolome ,Hepatocytes ,Animals ,Nuclear Magnetic Resonance, Biomolecular ,Drug metabolism ,Cells, Cultured ,medicine.drug - Abstract
Trichostatin A (TSA) is a histone deacetylase inhibitor that has antiproliferative and differentiation-inducing effects on cancer cells, and in cultures of primary hepatocytes has been shown to maintain xenobiotic metabolic capacity. Using an NMR-based metabolic profiling approach, we evaluated if the endogenous metabolome was stabilized and the normal metabolic phenotype retained in this model. Aqueous soluble metabolites were extracted from isolated rat hepatocytes after 44 and 92 h exposure to TSA (25 muM) together with time-matched controls and measured by (1)H NMR spectroscopy. Multivariate analysis showed a clear difference in the global metabolic profile over time in control samples, while the TSA treated group was more closely clustered at both time points, suggesting that treatment reduced the time related effect on metabolism that was observed in the control. TSA treatment was associated with decreases in glycerophosphocholine, 3-hydroxybutyric acid, glycine and adenosine, an increase in glycogen, and a reduction in the decrease of inosine, hypoxanthine, and glutathione over time. Collectively, our data suggest that TSA treatment reduces the loss of a normal metabolic phenotype in cultured primary hepatocytes, improving the model as a tool to study endogenous liver metabolism, xenobiotic metabolism, and potentially affecting the accuracy of all biological assays in this system.
- Published
- 2009
27. DNA adduct levels in the liver of the F344 rat treated with the natural flavour methyl eugenol
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James K. Ellis, Paul L. Carmichael, and Nigel J. Gooderham
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chemistry.chemical_compound ,Methyl eugenol ,Stereochemistry ,Chemistry ,Flavour ,DNA adduct ,F344 rats ,Organic chemistry ,Toxicology - Published
- 2006
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28. Effect of the Histone Deacetylase Inhibitor Trichostatin A on the Metabolome of Cultured Primary Hepatocytes.
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James K. Ellis, Pui Hei Chan, Tatyana Doktorova, Toby J. Athersuch, Rachel Cavill, Tamara Vanhaecke, Vera Rogiers, Mathieu Vinken, Jeremy K. Nicholson, Timothy M. D. Ebbels, and Hector C. Keun
- Published
- 2010
- Full Text
- View/download PDF
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