76 results on '"Jason M. Baron"'
Search Results
2. Artificial Intelligence in the Clinical Laboratory
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Jason M. Baron
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Biochemistry (medical) ,Clinical Biochemistry - Published
- 2023
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3. Order Indication Solicitation to Assess Clinical Laboratory Test Utilization: D-Dimer Order Patterns as an Illustrative Case
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Joseph W Rudolf, Jason M Baron, and Anand S Dighe
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clinical laboratory information systems ,clinical decision support systems ,medical order entry systems ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background:A common challenge in the development of laboratory clinical decision support (CDS) and laboratory utilization management (UM) initiatives stems from the fact that many laboratory tests have multiple potential indications, limiting the ability to develop context-specific alerts. As a potential solution, we designed a CDS alert that asks the ordering clinician to provide the indication for testing, using D-dimer as an exemplar. Using data collected over a nearly 3-year period, we sought to determine whether the indication capture was a useful feature within the CDS alert and whether it provided actionable intelligence to guide the development of an UM strategy. Methods: We extracted results and ordering data for D-dimer testing performed in our laboratory over a 35-month period. We analyzed order patterns by clinical indication, hospital service, and length of hospitalization. Results: Our final data set included 13,971 result-order combinations and indeed provided actionable intelligence regarding test utilization patterns. For example, pulmonary embolism was the most common emergency department indication (86%), while disseminated intravascular coagulation was the most common inpatient indication (56%). D-dimer positivity rates increased with the duration of hospitalization and our data suggested limited utility for ordering this test in the setting of suspected venous thromboembolic disease in admitted patients. In addition, we found that D-dimer was ordered for unexpected indications including the assessment of stroke, dissection, and extracorporeal membrane oxygenation. Conclusions: Indication capture within a CDS alert and correlation with result data can provide insight into order patterns which can be used to develop future CDS strategies to guide appropriate test use by clinical indication.
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- 2019
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4. Development of a 'meta-model' to address missing data, predict patient-specific cancer survival and provide a foundation for clinical decision support
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Vishakha Sharma, Denise L. Heaney, Jason M. Baron, Ketan Paranjape, Matthew S Prime, and Tara Love
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clinical decision support ,AcademicSubjects/SCI01060 ,Computer science ,imputation ,Health Informatics ,Research and Applications ,Machine learning ,computer.software_genre ,survival ,01 natural sciences ,Clinical decision support system ,Machine Learning ,missing data ,010104 statistics & probability ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Neoplasms ,medicine ,Humans ,Imputation (statistics) ,0101 mathematics ,AcademicSubjects/MED00580 ,business.industry ,meta-model ,Cancer survival ,Models, Theoretical ,Predictive analytics ,Patient specific ,Decision Support Systems, Clinical ,Prognosis ,medicine.disease ,Missing data ,Survival Analysis ,Metamodeling ,ROC Curve ,Area Under Curve ,030220 oncology & carcinogenesis ,Artificial intelligence ,AcademicSubjects/SCI01530 ,business ,computer - Abstract
Objective Like most real-world data, electronic health record (EHR)–derived data from oncology patients typically exhibits wide interpatient variability in terms of available data elements. This interpatient variability leads to missing data and can present critical challenges in developing and implementing predictive models to underlie clinical decision support for patient-specific oncology care. Here, we sought to develop a novel ensemble approach to addressing missing data that we term the “meta-model” and apply the meta-model to patient-specific cancer prognosis. Materials and Methods Using real-world data, we developed a suite of individual random survival forest models to predict survival in patients with advanced lung cancer, colorectal cancer, and breast cancer. Individual models varied by the predictor data used. We combined models for each cancer type into a meta-model that predicted survival for each patient using a weighted mean of the individual models for which the patient had all requisite predictors. Results The meta-model significantly outperformed many of the individual models and performed similarly to the best performing individual models. Comparisons of the meta-model to a more traditional imputation-based method of addressing missing data supported the meta-model’s utility. Conclusions We developed a novel machine learning–based strategy to underlie clinical decision support and predict survival in cancer patients, despite missing data. The meta-model may more generally provide a tool for addressing missing data across a variety of clinical prediction problems. Moreover, the meta-model may address other challenges in clinical predictive modeling including model extensibility and integration of predictive algorithms trained across different institutions and datasets.
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- 2020
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5. Iron studies and transferrin, a source of test ordering confusion highly amenable to clinical decision support
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Anand S. Dighe, Dustin McEvoy, Richard Huang, and Jason M. Baron
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0301 basic medicine ,medicine.medical_specialty ,Diagnostic information ,Iron ,Clinical Biochemistry ,Biochemistry ,Clinical decision support system ,03 medical and health sciences ,0302 clinical medicine ,Total iron-binding capacity ,Humans ,Medicine ,Intensive care medicine ,Confusion ,chemistry.chemical_classification ,Hematologic Tests ,medicine.diagnostic_test ,business.industry ,Transferrin saturation ,Biochemistry (medical) ,Transferrin ,General Medicine ,Decision Support Systems, Clinical ,Laboratory test ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,medicine.symptom ,business ,Biomarkers ,Test ordering - Abstract
Introduction An important cause of laboratory test misordering and overutilization is clinician confusion between tests with similar sounding names or similar indications. We identified an area of test ordering confusion with iron studies that involves total iron binding capacity (TIBC), transferrin, and transferrin saturation. We observed concurrent ordering of direct transferrin along with TIBC at many hospitals within our health system and suspected this was unnecessary. Methods We extracted patient test results for transferrin, TIBC and other biomarkers. Using these data, we evaluated both patterns of test utilization and test result concordance. We implemented a clinical decision support (CDS) alert to discourage unnecessary orders for direct transferrin. Results Using linear regression, we were able to predict transferrin from either TIBC alone or TIBC with other analytes with a high degree of accuracy, demonstrating that in most cases, direct transferrin in combination with TIBC provides little if any additional diagnostic information beyond TIBC alone. The CDS alert proved highly effective in reducing transferrin test utilization at four different hospitals. Conclusions Concurrent ordering of direct transferrin and TIBC should usually be avoided. Removal of transferrin or TIBC from the test menu or implementation of CDS may improve utilization of these tests.
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- 2020
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6. Validation and Implementation of an Ordering Alert to Improve the Efficiency of Monoclonal Gammopathy Evaluation
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Mandakolathur R. Murali, Daimon P. Simmons, Jason M. Baron, Anand S. Dighe, Sacha N. Uljon, Joseph W Rudolf, Dustin McEvoy, and Sayon Dutta
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Decision support system ,Computer science ,Paraproteinemias ,Efficiency ,030204 cardiovascular system & hematology ,Clinical decision support system ,Medical Order Entry Systems ,03 medical and health sciences ,0302 clinical medicine ,Cost Savings ,Retrospective analysis ,medicine ,Humans ,Operations management ,Practice Patterns, Physicians' ,Utilization management ,Retrospective Studies ,business.industry ,General Medicine ,Decision Support Systems, Clinical ,Cost savings ,Monoclonal gammopathy ,030220 oncology & carcinogenesis ,medicine.symptom ,business ,Agile software development - Abstract
Objectives To evaluate the use of a provider ordering alert to improve laboratory efficiency and reduce costs. Methods We conducted a retrospective study to assess the use of an institutional reflex panel for monoclonal gammopathy evaluation. We then created a clinical decision support (CDS) alert to educate and encourage providers to change their less-efficient orders to the reflex panel. Results Our retrospective analysis demonstrated that an institutional reflex panel could be safely substituted for a less-efficient and higher-cost panel. The implemented CDS alert resulted in 79% of providers changing their high-cost order panel to an order panel based on the reflex algorithm. Conclusions The validated decision support alert demonstrated high levels of provider acceptance and directly led to operational and cost savings within the laboratory. Furthermore, these studies highlight the value of laboratory involvement with CDS efforts to provide agile and targeted provider ordering assistance.
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- 2019
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7. Machine Learning Models Improve the Diagnostic Yield of Peripheral Blood Flow Cytometry
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Anand S. Dighe, Aliyah R. Sohani, M. Lisa Zhang, Alan Guo, Stephan Kadauke, and Jason M. Baron
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Adult ,Male ,Decision tree ,Hematologic Neoplasms ,Logistic regression ,Machine learning ,computer.software_genre ,Machine Learning ,Clinical history ,Humans ,Medicine ,Lymphocyte Count ,Aged ,Aged, 80 and over ,medicine.diagnostic_test ,Peripheral blood flow ,business.industry ,Complete blood count ,General Medicine ,Middle Aged ,Flow Cytometry ,Peripheral blood ,Logistic Models ,Female ,Artificial intelligence ,Triage ,business ,computer ,Cytometry ,Algorithms - Abstract
Objectives Peripheral blood flow cytometry (PBFC) is useful for evaluating circulating hematologic malignancies (HM) but has limited diagnostic value for screening. We used machine learning to evaluate whether clinical history and CBC/differential parameters could improve PBFC utilization. Methods PBFC cases with concurrent/recent CBC/differential were split into training (n = 626) and test (n = 159) cohorts. We classified PBFC results with abnormal blast/lymphoid populations as positive and used two models to predict results. Results Positive PBFC results were seen in 58% and 21% of training cases with and without prior HM (P < .001). % neutrophils, absolute lymphocyte count, and % blasts/other cells differed significantly between positive and negative PBFC groups (areas under the curve [AUC] > 0.7). Among test cases, a decision tree model achieved 98% sensitivity and 65% specificity (AUC = 0.906). A logistic regression model achieved 100% sensitivity and 54% specificity (AUC = 0.919). Conclusions We outline machine learning-based triaging strategies to decrease unnecessary utilization of PBFC by 35% to 40%.
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- 2019
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8. Real evidence to assess clinical testing interference risk (REACTIR): A strategy using real world data to assess the prevalence of interfering substances in patients undergoing clinical laboratory testing
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Denise L. Heaney, Ani John, Jason M. Baron, and Corinne R. Fantz
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Blood Glucose ,medicine.medical_specialty ,acetaminophen overdose ,medicine.diagnostic_test ,business.industry ,Point-of-Care Systems ,Biochemistry (medical) ,Clinical Biochemistry ,General Medicine ,Biochemistry ,Laboratory testing ,Clinical decision support system ,Point-of-Care Testing ,Patient harm ,medicine ,Prevalence ,Glucose test ,Humans ,In patient ,Intensive care medicine ,business ,Real world data ,Laboratories, Clinical ,Point of care - Abstract
Introduction Laboratory test interferences can cause spurious test results and patient harm. Knowing the frequency of various interfering substances in patient populations likely to be tested with a particular laboratory assay may inform test development, test utilization and strategies to mitigate interference risk. Methods We developed REACTIR (Real Evidence to Assess Clinical Testing Interference Risk), an approach using real world data to assess the prevalence of various interfering substances in patients tested with a particular type of assay. REACTIR uses administrative real world data to identify and subgroup patient cohorts tested with a particular laboratory test and evaluate interference risk. Results We demonstrate the application REACTIR to point of care (POC) blood glucose testing. We found that exposure to several substances with the potential to interfere in POC blood glucose tests, including N-acetyl cysteine (NAC) and high dose vitamin C was uncommon in most patients undergoing POC glucose tests with several key exceptions, such as burn patients receiving high dose IV-vitamin C or acetaminophen overdose patients receiving NAC. Conclusions Findings from REACTIR may support risk mitigation strategies including targeted clinician education and clinical decision support. Likewise, adaptations of REACTIR to premarket assay development may inform optimal assay design and assessment.
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- 2021
9. Lab medicine informatics
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Jason M. Baron and Anand S. Dighe
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Medical education ,Engineering ,business.industry ,Informatics ,business - Published
- 2021
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10. Contributors
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Zane D. Amenhotep, Wayne B. Anderson, Jason M. Baron, Carey-Ann D. Burnham, Jing Cao, Janine D. Cook, Gyorgy Csako, Sarah Delaney, Anand S. Dighe, Shu-Ling Fan, Wieslaw Furmaga, Putuma P. Gqamana, Dina N. Greene, Neil Harris, Ibrahim Hashim, Erika M. Hissong, Paul J. Jannetto, Michael Karasick, Adil I. Khan, Rasoul A. Koupaei, Kent Lewandrowski, Chuanyi Mark Lu, Maximo J. Marin, Yvette McCarter, Qing H. Meng, James H. Nichols, Anthony Okorodudu, Octavia M. Peck Palmer, Hanna Rennert, Luke Rodda, Lusia Sepiashvili, Christine L.H. Snozek, Carole A. Spencer, John Toffaletti, Nam Tran, Greg Tsongalis, Priya D. Velu, Jeffrey Whitman, Xander M.R. van Wijk, Alison Woodworth, Alan H.B. Wu, Melanie L. Yarbrough, He Sarina Yang, Brandy Young, Y. Victoria Zhang, and Zhen Zhao
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- 2021
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11. Perceptions of pathology informatics by non-informaticist pathologists and trainees
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Addie Walker, Christopher Garcia, Jason M Baron, Thomas M Gudewicz, John R Gilbertson, Walter H Henricks, and Roy E Lee
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Education ,fellow ,pathology informatics ,perceptions ,resident ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Although pathology informatics (PI) is essential to modern pathology practice, the field is often poorly understood. Pathologists who have received little to no exposure to informatics, either in training or in practice, may not recognize the roles that informatics serves in pathology. The purpose of this study was to characterize perceptions of PI by noninformatics-oriented pathologists and to do so at two large centers with differing informatics environments. Methods: Pathology trainees and staff at Cleveland Clinic (CC) and Massachusetts General Hospital (MGH) were surveyed. At MGH, pathology department leadership has promoted a pervasive informatics presence through practice, training, and research. At CC, PI efforts focus on production systems that serve a multi-site integrated health system and a reference laboratory, and on the development of applications oriented to department operations. The survey assessed perceived definition of PI, interest in PI, and perceived utility of PI. Results: The survey was completed by 107 noninformatics-oriented pathologists and trainees. A majority viewed informatics positively. Except among MGH trainees, confusion of PI with information technology (IT) and help desk services was prominent, even in those who indicated they understood informatics. Attendings and trainees indicated desire to learn more about PI. While most acknowledged that having some level of PI knowledge would be professionally useful and advantageous, only a minority plan to utilize it. Conclusions: Informatics is viewed positively by the majority of noninformatics pathologists at two large centers with differing informatics orientations. Differences in departmental informatics culture can be attributed to the varying perceptions of PI by different individuals. Incorrect perceptions exist, such as conflating PI with IT and help desk services, even among those who claim to understand PI. Further efforts by the PI community could address such misperceptions, which could help enable a better understanding of what PI is and is not, and potentially lead to increased acceptance by non-informaticist pathologists.
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- 2016
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12. Use of machine learning to predict clinical decision support compliance, reduce alert burden, and evaluate duplicate laboratory test ordering alerts
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Dustin McEvoy, Richard Huang, Jason M. Baron, and Anand S. Dighe
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AcademicSubjects/SCI01060 ,Health Informatics ,Context (language use) ,Population health ,Logistic regression ,Machine learning ,computer.software_genre ,Research and Applications ,Clinical decision support system ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,alert fatigue ,030212 general & internal medicine ,Set (psychology) ,Utilization management ,Receiver operating characteristic ,business.industry ,clinical decision support (CDS) ,duplicate laboratory test ,Test (assessment) ,machine learning ,030220 oncology & carcinogenesis ,Artificial intelligence ,alert burden ,AcademicSubjects/SCI01530 ,business ,AcademicSubjects/MED00010 ,computer ,practice variation - Abstract
Objectives While well-designed clinical decision support (CDS) alerts can improve patient care, utilization management, and population health, excessive alerting may be counterproductive, leading to clinician burden and alert fatigue. We sought to develop machine learning models to predict whether a clinician will accept the advice provided by a CDS alert. Such models could reduce alert burden by targeting CDS alerts to specific cases where they are most likely to be effective. Materials and Methods We focused on a set of laboratory test ordering alerts, deployed at 8 hospitals within the Partners Healthcare System. The alerts notified clinicians of duplicate laboratory test orders and advised discontinuation. We captured key attributes surrounding 60 399 alert firings, including clinician and patient variables, and whether the clinician complied with the alert. Using these data, we developed logistic regression models to predict alert compliance. Results We identified key factors that predicted alert compliance; for example, clinicians were less likely to comply with duplicate test alerts triggered in patients with a prior abnormal result for the test or in the context of a nonvisit-based encounter (eg, phone call). Likewise, differences in practice patterns between clinicians appeared to impact alert compliance. Our best-performing predictive model achieved an area under the receiver operating characteristic curve (AUC) of 0.82. Incorporating this model into the alerting logic could have averted more than 1900 alerts at a cost of fewer than 200 additional duplicate tests. Conclusions Deploying predictive models to target CDS alerts may substantially reduce clinician alert burden while maintaining most or all the CDS benefit.
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- 2020
13. Using Machine Learning-Based Multianalyte Delta Checks to Detect Wrong Blood in Tube Errors
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Matthew W. Rosenbaum and Jason M. Baron
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Computer science ,Medical laboratory ,030204 cardiovascular system & hematology ,Machine learning ,computer.software_genre ,Machine Learning ,03 medical and health sciences ,Patient safety ,0302 clinical medicine ,Area under curve ,Patient harm ,Humans ,Blood Specimen Collection ,Medical Errors ,business.industry ,General Medicine ,Wrong blood in tube ,Test (assessment) ,Support vector machine ,Identifier ,030220 oncology & carcinogenesis ,Patient Safety ,Artificial intelligence ,business ,computer ,Algorithms - Abstract
ObjectivesAn unfortunate reality of laboratory medicine is that blood specimens collected from one patient occasionally get mislabeled with identifiers from a different patient, resulting in so-called “wrong blood in tube” (WBIT) errors and potential patient harm. Here, we sought to develop a machine learning-based, multianalyte delta check algorithm to detect WBIT errors and mitigate patient harm.MethodsWe simulated WBIT errors within sets of routine inpatient chemistry test results to develop, train, and evaluate five machine learning-based WBIT detection algorithms.ResultsThe best-performing WBIT detection algorithm we developed was based on a support vector machine and incorporated changes in test results between consecutive collections across 11 analytes. This algorithm achieved an area under the curve of 0.97 and considerably outperformed traditional single-analyte delta checks.ConclusionsMachine learning-based multianalyte delta checks may offer a practical strategy to identify WBIT errors prior to test reporting and improve patient safety.
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- 2018
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14. Laboratory Testing for Tick-Borne Infections in a Large Northeastern Academic Medical Center
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Jason M. Baron, Elizabeth Lee-Lewandrowski, John A. Branda, and Joseph W Rudolf
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Tick-borne disease ,medicine.medical_specialty ,business.industry ,Incidence (epidemiology) ,Retrospective cohort study ,General Medicine ,medicine.disease ,LYME ,Serology ,03 medical and health sciences ,0302 clinical medicine ,Lyme disease ,030220 oncology & carcinogenesis ,Epidemiology ,Emergency medicine ,Medicine ,030212 general & internal medicine ,Young adult ,business - Abstract
Objectives We evaluated changes in the testing menu, volume, and positivity rates for tick-borne illnesses in a New England medical center over an 11-year time frame. Methods Testing data were obtained by a retrospective review utilizing searchable data from a laboratory information system archive. Results Testing for tick-borne infections (TBI) increased 5.3-fold over an 11-year time period and the number of positive test results increased threefold. Annual rates for Lyme serology positivity varied from 14% to 29% and for western blot confirmation from 26% to 48%. Test volumes and the number of positive results increased for all TBI endemic to our region. Conclusions Our results confirm national trends suggesting increasing rates of TBI and substantially increased testing. This may reflect a greater incidence of TBI in our region and/or increased awareness of these infections.
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- 2018
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15. Case 22-2018: A 64-Year-Old Man with Progressive Leg Weakness, Recurrent Falls, and Anemia
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Jason M. Baron, William P. Schmitt, Fatima Cody Stanford, and Susan E. Bennett
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Male ,Pediatrics ,medicine.medical_specialty ,Fatal outcome ,Proximal muscle weakness ,Anemia ,Recurrent falls ,Article ,Diagnosis, Differential ,Hypotension, Orthostatic ,03 medical and health sciences ,Orthostatic vital signs ,Fatal Outcome ,0302 clinical medicine ,Vitamin B Deficiency ,hemic and lymphatic diseases ,medicine ,Humans ,030212 general & internal medicine ,Muscle Weakness ,Leg weakness ,business.industry ,Avitaminosis ,General Medicine ,Middle Aged ,medicine.disease ,Alcohol-Induced Disorders ,Accidental Falls ,Scurvy ,business ,030217 neurology & neurosurgery - Abstract
A Man with Leg Weakness, Recurrent Falls, and Anemia A 64-year-old man was admitted to the hospital because of recurrent falls. He had proximal muscle weakness, orthostatic hypotension, and anemia....
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- 2018
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16. Creation and Use of an Electronic Health Record Reporting Database to Improve a Laboratory Test Utilization Program
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Genti Strazimiri, Jason M. Baron, Danielle E. Kurant, Kent B. Lewandrowski, Joseph W Rudolf, and Anand S. Dighe
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Databases, Factual ,Computer science ,Process (engineering) ,Data field ,MEDLINE ,Health Informatics ,computer.software_genre ,03 medical and health sciences ,0302 clinical medicine ,Health Information Management ,Electronic health record ,Health care ,Information system ,Electronic Health Records ,Humans ,030212 general & internal medicine ,Utilization management ,Database ,Clinical Laboratory Techniques ,business.industry ,Computer Science Applications ,Laboratory test ,Research Design ,030220 oncology & carcinogenesis ,business ,computer - Abstract
Objectives Laboratory-based utilization management programs typically rely primarily on data derived from the laboratory information system to analyze testing volumes for trends and utilization concerns. We wished to examine the ability of an electronic health record (EHR) laboratory orders database to improve a laboratory utilization program. Methods We obtained a daily file from our EHR containing data related to laboratory test ordering. We then used an automated process to import this file into a database to facilitate self-service queries and analysis. Results The EHR laboratory orders database has proven to be an important addition to our utilization management program. We provide three representative examples of how the EHR laboratory orders database has been used to address common utilization issues. We demonstrate that analysis of EHR laboratory orders data has been able to provide unique insights that cannot be obtained by review of laboratory information system data alone. Further, we provide recommendations on key EHR data fields of importance to laboratory utilization efforts. Conclusion We demonstrate that an EHR laboratory orders database may be a useful tool in the monitoring and optimization of laboratory testing. We recommend that health care systems develop and maintain a database of EHR laboratory orders data and integrate this data with their laboratory utilization programs.
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- 2018
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17. Environmental components and methods for engaging pathology residents in informatics training
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Christopher A Garcia, Jason M Baron, Bruce A Beckwith, Victor Brodsky, Anand S Dighe, Thomas M Gudewicz, Ji Yeon Kim, Veronica E Klepeis, William J Lane, Roy E Lee, Bruce P Levy, Michael A Mahowald, Diana Mandelker, David S McClintock, Andrew M Quinn, Luigi K Rao, Gregory M Riedlinger, Joseph Rudolf, and John R Gilbertson
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Published
- 2015
18. Clinical laboratory analytics: Challenges and promise for an emerging discipline
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Brian H Shirts, Brian R Jackson, Geoffrey S Baird, Jason M Baron, Bryan Clements, Ricky Grisson, Ronald George Hauser, Julie R Taylor, Enrique Terrazas, and Brad Brimhall
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Big data, clinical laboratory, clinical pathology, data analysis, information processing, utilization management ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
The clinical laboratory is a major source of health care data. Increasingly these data are being integrated with other data to inform health system-wide actions meant to improve diagnostic test utilization, service efficiency, and "meaningful use." The Academy of Clinical Laboratory Physicians and Scientists hosted a satellite meeting on clinical laboratory analytics in conjunction with their annual meeting on May 29, 2014 in San Francisco. There were 80 registrants for the clinical laboratory analytics meeting. The meeting featured short presentations on current trends in clinical laboratory analytics and several panel discussions on data science in laboratory medicine, laboratory data and its role in the larger healthcare system, integrating laboratory analytics, and data sharing for collaborative analytics. One main goal of meeting was to have an open forum of leaders that work with the "big data" clinical laboratories produce. This article summarizes the proceedings of the meeting and content discussed.
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- 2015
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19. 3D-MICE: integration of cross-sectional and longitudinal imputation for multi-analyte longitudinal clinical data
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Yuan Luo, Jason M. Baron, Anand S. Dighe, and Peter Szolovits
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0301 basic medicine ,Computer science ,Datasets as Topic ,Health Informatics ,Research and Applications ,computer.software_genre ,01 natural sciences ,Clinical decision support system ,Machine Learning ,010104 statistics & probability ,03 medical and health sciences ,symbols.namesake ,Data Mining ,Imputation (statistics) ,0101 mathematics ,Time series ,Gaussian process ,Diagnostic Tests, Routine ,Computational Biology ,Predictive analytics ,Missing data ,Systems Integration ,030104 developmental biology ,Data point ,symbols ,Data mining ,Clinical Laboratory Information Systems ,computer ,Algorithms - Abstract
ObjectiveA key challenge in clinical data mining is that most clinical datasets contain missing data. Since many commonly used machine learning algorithms require complete datasets (no missing data), clinical analytic approaches often entail an imputation procedure to “fill in” missing data. However, although most clinical datasets contain a temporal component, most commonly used imputation methods do not adequately accommodate longitudinal time-based data. We sought to develop a new imputation algorithm, 3-dimensional multiple imputation with chained equations (3D-MICE), that can perform accurate imputation of missing clinical time series data.MethodsWe extracted clinical laboratory test results for 13 commonly measured analytes (clinical laboratory tests). We imputed missing test results for the 13 analytes using 3 imputation methods: multiple imputation with chained equations (MICE), Gaussian process (GP), and 3D-MICE. 3D-MICE utilizes both MICE and GP imputation to integrate cross-sectional and longitudinal information. To evaluate imputation method performance, we randomly masked selected test results and imputed these masked results alongside results missing from our original data. We compared predicted results to measured results for masked data points.Results3D-MICE performed significantly better than MICE and GP-based imputation in a composite of all 13 analytes, predicting missing results with a normalized root-mean-square error of 0.342, compared to 0.373 for MICE alone and 0.358 for GP alone.Conclusions3D-MICE offers a novel and practical approach to imputing clinical laboratory time series data. 3D-MICE may provide an additional tool for use as a foundation in clinical predictive analytics and intelligent clinical decision support.
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- 2017
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20. Implementation of point-of-care testing in a general internal medicine practice: A confirmation study
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Jason M. Baron, Elizabeth-Lee Lewandrowski, Sunu Yeh, J. Benjamin Crocker, and Kent B. Lewandrowski
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Male ,medicine.medical_specialty ,business.industry ,Cost effectiveness ,Point-of-care testing ,Biochemistry (medical) ,Clinical Biochemistry ,030209 endocrinology & metabolism ,General Medicine ,Primary care ,Middle Aged ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Point-of-Care Testing ,Internal medicine ,Family medicine ,Cohort ,Internal Medicine ,Humans ,Medicine ,Female ,Observational study ,030212 general & internal medicine ,business - Abstract
In a previous study we reported on the impact of point-of-care testing (POCT) on practice efficiency in an academic primary care practice that was established to develop new models of care delivery. Here we report a follow-on confirmation study in a more typical primary care practice in the community.In this observational study with a retrospective comparison analysis we measured metrics of practice efficiency on two patient cohorts: those that did not receive POCT and those that did.In the patient cohort that received POCT there was a 99% reduction in letters to patients (p0.001), a 75% decrease in calls to patients (not significant due to small numbers), a 50% reduction in follow-up tests per visit (p=0.044) and a 38% reduction in follow-up visits due to abnormal test results (p=0.178). Financial analysis including testing costs, revenues and efficiency gains to the practice demonstrated a net financial benefit of $11.90-14.74 per patient visit.Our data confirm the earlier published findings that POCT can improve metrics of practice efficiency in a primary care practice.
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- 2017
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21. Utilization Management of High-Cost Imaging in an Outpatient Setting in a Large Stable Patient and Provider Cohort over 7 Years
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Daniel I. Rosenthal, Christopher L. Sistrom, Timothy G. Ferris, James H. Thrall, Keith J. Dreyer, Jason M. Baron, Helaine R Rockett, Jeffrey B. Weilburg, and Markus Stout
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Diagnostic Imaging ,Male ,Pediatrics ,medicine.medical_specialty ,Physicians, Primary Care ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Outpatients ,medicine ,Outpatient setting ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,030212 general & internal medicine ,Utilization management ,Retrospective Studies ,Primary Health Care ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,Retrospective cohort study ,Middle Aged ,Positron emission tomography ,Cohort ,Female ,business ,Cohort study - Abstract
Purpose To quantify the effect of a comprehensive, long-term, provider-led utilization management (UM) program on high-cost imaging (computed tomography, magnetic resonance imaging, nuclear imaging, and positron emission tomography) performed on an outpatient basis. Materials and Methods This retrospective, 7-year cohort study included all patients regularly seen by primary care physicians (PCPs) at an urban academic medical center. The main outcome was the number of outpatient high-cost imaging examinations per patient per year ordered by the patient's PCP or by any specialist. The authors determined the probability of a patient undergoing any high-cost imaging procedure during a study year and the number of examinations per patient per year (intensity) in patients who underwent high-cost imaging. Risk-adjusted hierarchical models were used to directly quantify the physician component of variation in probability and intensity of high-cost imaging use, and clinicians were provided with regular comparative feedback on the basis of the results. Observed trends in high-cost imaging use and provider variation were compared with the same measures for outpatient laboratory studies because laboratory use was not subject to UM during this period. Finally, per-member per-year high-cost imaging use data were compared with statewide high-cost imaging use data from a major private payer on the basis of the same claim set. Results The patient cohort steadily increased in size from 88 959 in 2007 to 109 823 in 2013. Overall high-cost imaging utilization went from 0.43 examinations per year in 2007 to 0.34 examinations per year in 2013, a decrease of 21.33% (P < .0001). At the same time, similarly adjusted routine laboratory study utilization decreased by less than half that rate (9.4%, P < .0001). On the basis of unadjusted data, outpatient high-cost imaging utilization in this cohort decreased 28%, compared with a 20% decrease in statewide utilization (P = .0023). Conclusion Analysis of high-cost imaging utilization in a stable cohort of patients cared for by PCPs during a 7-year period showed that comprehensive UM can produce a significant and sustained reduction in risk-adjusted per-patient year outpatient high-cost imaging volume. © RSNA, 2017.
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- 2017
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22. Analysis of Daily Laboratory Orders at a Large Urban Academic Center
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Joseph W Rudolf, Bradley M. Wertheim, Jason M. Baron, Douglas E. Wright, Irina K. Kamis, Christopher M. Coley, Kent B. Lewandrowski, and Anand S. Dighe
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Decision support system ,General Medicine ,Audit ,Clinical decision support system ,Confidence interval ,Test (assessment) ,03 medical and health sciences ,0302 clinical medicine ,Order (business) ,030220 oncology & carcinogenesis ,Continuous auditing ,Operations management ,030212 general & internal medicine ,Psychology ,Utilization management - Abstract
Objectives We sought to address concerns regarding recurring inpatient laboratory test order practices (daily laboratory tests) through a multifaceted approach to changing ordering patterns. Methods We engaged in an interdepartmental collaboration to foster mindful test ordering through clinical policy creation, electronic clinical decision support, and continuous auditing and feedback. Results Annualized daily order volumes decreased from approximately 25,000 to 10,000 during a 33-month postintervention review. This represented a significant change from preintervention order volumes (95% confidence interval, 0.61-0.64; P < 10-16). Total inpatient test volumes were not affected. Conclusions Durable changes to inpatient order practices can be achieved through a collaborative approach to utilization management that includes shared responsibility for establishing clinical guidelines and electronic decision support. Our experience suggests auditing and continued feedback are additional crucial components to changing ordering behavior. Curtailing daily orders alone may not be a sufficient strategy to reduce in-laboratory costs.
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- 2017
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23. Order Indication Solicitation to Assess Clinical Laboratory Test Utilization: D-Dimer Order Patterns as an Illustrative Case
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Jason M. Baron, Anand S. Dighe, and Joseph W Rudolf
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Clinical laboratory information systems ,Clinical laboratory test ,medicine.medical_treatment ,Health Informatics ,lcsh:Computer applications to medicine. Medical informatics ,Clinical decision support system ,030218 nuclear medicine & medical imaging ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,medical order entry systems ,D-dimer ,Extracorporeal membrane oxygenation ,medicine ,lcsh:Pathology ,Utilization management ,clinical decision support systems ,business.industry ,Emergency department ,medicine.disease ,Computer Science Applications ,Test (assessment) ,Order (business) ,030220 oncology & carcinogenesis ,lcsh:R858-859.7 ,Original Article ,Medical emergency ,business ,lcsh:RB1-214 - Abstract
Background:A common challenge in the development of laboratory clinical decision support (CDS) and laboratory utilization management (UM) initiatives stems from the fact that many laboratory tests have multiple potential indications, limiting the ability to develop context-specific alerts. As a potential solution, we designed a CDS alert that asks the ordering clinician to provide the indication for testing, using D-dimer as an exemplar. Using data collected over a nearly 3-year period, we sought to determine whether the indication capture was a useful feature within the CDS alert and whether it provided actionable intelligence to guide the development of an UM strategy. Methods: We extracted results and ordering data for D-dimer testing performed in our laboratory over a 35-month period. We analyzed order patterns by clinical indication, hospital service, and length of hospitalization. Results: Our final data set included 13,971 result-order combinations and indeed provided actionable intelligence regarding test utilization patterns. For example, pulmonary embolism was the most common emergency department indication (86%), while disseminated intravascular coagulation was the most common inpatient indication (56%). D-dimer positivity rates increased with the duration of hospitalization and our data suggested limited utility for ordering this test in the setting of suspected venous thromboembolic disease in admitted patients. In addition, we found that D-dimer was ordered for unexpected indications including the assessment of stroke, dissection, and extracorporeal membrane oxygenation. Conclusions: Indication capture within a CDS alert and correlation with result data can provide insight into order patterns which can be used to develop future CDS strategies to guide appropriate test use by clinical indication.
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- 2019
24. Laboratory Blood-Based Testing for Non-Lyme Disease Tick-Borne Infections at a National Reference Laboratory
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Zhen Chen, Elizabeth Lee-Lewandrowski, John A. Branda, Harvey W. Kaufman, and Jason M. Baron
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Adult ,medicine.medical_specialty ,Anaplasmosis ,Adolescent ,Rocky Mountain spotted fever ,Colorado Tick Fever ,030231 tropical medicine ,Disease ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Lyme disease ,Environmental health ,Babesiosis ,Medicine ,Humans ,030212 general & internal medicine ,Child ,Disease Notification ,Rocky Mountain Spotted Fever ,Tularemia ,Aged ,Aged, 80 and over ,Tick-borne disease ,business.industry ,Public health ,Ehrlichiosis ,Infant, Newborn ,Relapsing Fever ,Colorado tick fever ,Infant ,General Medicine ,Middle Aged ,medicine.disease ,Tick-Borne Diseases ,Child, Preschool ,Ehrlichiosis (canine) ,Epidemiological Monitoring ,business - Abstract
ObjectivesWe evaluated trends in non-Lyme disease tick-borne disease (NLTBI) testing at a national reference laboratory.MethodsTesting data performed at Quest Diagnostics during 2010 to 2016 were analyzed nationally and at the state level.ResultsTesting and positivity for most NLTBIs increased dramatically from 2010 through 2016 based on testing from a large reference laboratory. The number of positive cases, though not as stringent as criteria for public health reporting, generally exceeds that reported by the Centers for Disease Control and Prevention. The frequency of NLTBI in the US is seasonal but testing activity and positive test results are observed throughout all months of the year. Positive results for NLTBI testing mostly originated from a limited number of states, indicating the geographic concentration and distribution of NLTBIs reported in this study.ConclusionsThis report provides an important complementary source of data to best understand trends in and spread of NLTBI.
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- 2019
25. Machine Learning and Other Emerging Decision Support Tools
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Jason M. Baron, Anand S. Dighe, and Danielle E. Kurant
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business.industry ,Computer science ,Biochemistry (medical) ,Clinical Biochemistry ,Machine learning ,computer.software_genre ,Decision Support Systems, Clinical ,Clinical decision support system ,Clinical knowledge ,Machine Learning ,Computational pathology ,Knowledge extraction ,Decision support tools ,Humans ,Artificial intelligence ,business ,Clinical Laboratory Information Systems ,computer ,Healthcare system - Abstract
Emerging applications of machine learning and artificial intelligence offer the opportunity to discover new clinical knowledge through secondary exploration of existing patient medical records. This new knowledge may in turn offer a foundation to build new types of clinical decision support (CDS) that provide patient-specific insights and guidance across a wide range of clinical questions and settings. This article will provide an overview of these emerging approaches to CDS, discussing both existing technologies as well as challenges that health systems and informaticists will need to address to allow these emerging approaches to reach their full potential.
- Published
- 2019
26. Laboratory Blood-Based Testing for Lyme Disease at a National Reference Laboratory
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Elizabeth Lee-Lewandrowski, John A. Branda, Harvey W. Kaufman, Jason M. Baron, and Zhen Chen
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medicine.medical_specialty ,Blotting, Western ,Reference laboratory ,Immunoenzyme Techniques ,03 medical and health sciences ,0302 clinical medicine ,Lyme disease ,Internal medicine ,mental disorders ,medicine ,Humans ,Borrelia burgdorferi ,Lyme Disease ,biology ,medicine.diagnostic_test ,business.industry ,General Medicine ,biology.organism_classification ,medicine.disease ,Antibodies, Bacterial ,030220 oncology & carcinogenesis ,Immunoassay ,business ,Laboratories ,psychological phenomena and processes ,030215 immunology - Abstract
Objectives We evaluated trends in Lyme disease (LD) testing at a national reference laboratory. Methods LD screening enzyme immunoassay and Western blot testing data performed at Quest Diagnostics during 2010 to 2016 were analyzed nationally and at the state level. Results Overall, 593,800 (11.3%) results were positive of 5,255,636 tests. There was an increase in the rate of positivity over the last 2 years of the study and an increase in the number of positive tests in 2016. Positive tests were observed in all 50 states and the District of Columbia. New York had the most positive tests, whereas Connecticut had the highest positivity rate when normalized to state populations. Some states with historically low rates of LD (eg, Texas, Florida, and California) showed significant increases in testing and positivity rates over time. Conclusions LD testing and positivity have increased in recent years, including in states not historically associated with the disease.
- Published
- 2019
27. The 2013 symposium on pathology data integration and clinical decision support and the current state of field
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Jason M Baron, Anand S Dighe, Ramy Arnaout, Ulysses J Balis, W Stephen Black-Schaffer, Alexis B Carter, Walter H Henricks, John M Higgins, Brian R Jackson, JiYeon Kim, Veronica E Klepeis, Long P Le, David N Louis, Diana Mandelker, Craig H Mermel, James S Michaelson, Rakesh Nagarajan, Mihae E Platt, Andrew M Quinn, Luigi Rao, Brian H Shirts, and John R Gilbertson
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Clinical decision support, genomics, interpretive reporting, machine learning, test utilization ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Pathologists and informaticians are becoming increasingly interested in electronic clinical decision support for pathology, laboratory medicine and clinical diagnosis. Improved decision support may optimize laboratory test selection, improve test result interpretation and permit the extraction of enhanced diagnostic information from existing laboratory data. Nonetheless, the field of pathology decision support is still developing. To facilitate the exchange of ideas and preliminary studies, we convened a symposium entitled: Pathology data integration and clinical decision support. Methods: The symposium was held at the Massachusetts General Hospital, on May 10, 2013. Participants were selected to represent diverse backgrounds and interests and were from nine different institutions in eight different states. Results: The day included 16 plenary talks and three panel discussions, together covering four broad areas. Summaries of each presentation are included in this manuscript. Conclusions: A number of recurrent themes emerged from the symposium. Among the most pervasive was the dichotomy between diagnostic data and diagnostic information, including the opportunities that laboratories may have to use electronic systems and algorithms to convert the data they generate into more useful information. Differences between human talents and computer abilities were described; well-designed symbioses between humans and computers may ultimately optimize diagnosis. Another key theme related to the unique needs and challenges in providing decision support for genomics and other emerging diagnostic modalities. Finally, many talks relayed how the barriers to bringing decision support toward reality are primarily personnel, political, infrastructural and administrative challenges rather than technological limitations.
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- 2014
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28. The ongoing evolution of the core curriculum of a clinical fellowship in pathology informatics
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Andrew M Quinn, Veronica E Klepeis, Diana L Mandelker, Mia Y Platt, Luigi K F Rao, Gregory Riedlinger, Jason M Baron, Victor Brodsky, Ji Yeon Kim, William Lane, Roy E Lee, Bruce P Levy, David S McClintock, Bruce A Beckwith, Frank C Kuo, and John R Gilbertson
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Clinical informatics curriculum, clinical informatics teaching, pathology informatics, pathology informatics curriculum, pathology informatics teaching ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
The Partners HealthCare system′s Clinical Fellowship in Pathology Informatics (Boston, MA, USA) faces ongoing challenges to the delivery of its core curriculum in the forms of: (1) New classes of fellows annually with new and varying educational needs and increasingly fractured, enterprise-wide commitments; (2) taxing electronic health record (EHR) and laboratory information system (LIS) implementations; and (3) increasing interest in the subspecialty at the academic medical centers (AMCs) in what is a large health care network. In response to these challenges, the fellowship has modified its existing didactic sessions and piloted both a network-wide pathology informatics lecture series and regular "learning laboratories". Didactic sessions, which had previously included more formal discussions of the four divisions of the core curriculum: Information fundamentals, information systems, workflow and process, and governance and management, now focus on group discussions concerning the fellows′ ongoing projects, updates on the enterprise-wide EHR and LIS implementations, and directed questions about weekly readings. Lectures are given by the informatics faculty, guest informatics faculty, current and former fellows, and information systems members in the network, and are open to all professional members of the pathology departments at the AMCs. Learning laboratories consist of small-group exercises geared toward a variety of learning styles, and are driven by both the fellows and a member of the informatics faculty. The learning laboratories have created a forum for discussing real-time and real-world pathology informatics matters, and for incorporating awareness of and timely discussions about the latest pathology informatics literature. These changes have diversified the delivery of the fellowship′s core curriculum, increased exposure of faculty, fellows and trainees to one another, and more equitably distributed teaching responsibilities among the entirety of the pathology informatics asset in the network. Though the above approach has been in place less than a year, we are presenting it now as a technical note to allow for further discussion of evolving educational opportunities in pathology informatics and clinical informatics in general, and to highlight the importance of having a flexible fellowship with active participation from its fellows.
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- 2014
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29. Pathology informatics fellowship training: Focus on molecular pathology
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Diana Mandelker, Roy E Lee, Mia Y Platt, Gregory Riedlinger, Andrew Quinn, Luigi K. F. Rao, Veronica E Klepeis, Michael Mahowald, William J Lane, Bruce A Beckwith, Jason M Baron, David S McClintock, Frank C Kuo, Matthew S Lebo, and John R Gilbertson
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Clinical informatics, informatics fellowship training, molecular pathology informatics, molecular pathology training, molecular pathology, pathology informatics fellowship, pathology informatics training, pathology informatics ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Pathology informatics is both emerging as a distinct subspecialty and simultaneously becoming deeply integrated within the breadth of pathology practice. As specialists, pathology informaticians need a broad skill set, including aptitude with information fundamentals, information systems, workflow and process, and governance and management. Currently, many of those seeking training in pathology informatics additionally choose training in a second subspecialty. Combining pathology informatics training with molecular pathology is a natural extension, as molecular pathology is a subspecialty with high potential for application of modern biomedical informatics techniques. Methods and Results: Pathology informatics and molecular pathology fellows and faculty evaluated the current fellowship program′s core curriculum topics and subtopics for relevance to molecular pathology. By focusing on the overlap between the two disciplines, a structured curriculum consisting of didactics, operational rotations, and research projects was developed for those fellows interested in both pathology informatics and molecular pathology. Conclusions: The scope of molecular diagnostics is expanding dramatically as technology advances and our understanding of disease extends to the genetic level. Here, we highlight many of the informatics challenges facing molecular pathology today, and outline specific informatics principles necessary for the training of future molecular pathologists.
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- 2014
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30. Case 24-2016
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Hasan Bazari, Katrina Armstrong, William E. Palmer, and Jason M. Baron
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musculoskeletal diseases ,medicine.medical_specialty ,Weakness ,business.industry ,Acute kidney injury ,General Medicine ,030204 cardiovascular system & hematology ,medicine.disease ,Malaise ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Case records ,medicine ,Abdomen ,030212 general & internal medicine ,Radiology ,General hospital ,medicine.symptom ,Sclerotic bone ,business ,Pelvis - Abstract
A 66-year-old man presented with malaise, weakness, hypercalcemia, and acute kidney injury. CT of the abdomen and pelvis revealed no evidence of cancer; CT of the chest revealed a sclerotic lesion of the eighth rib. Additional tests were performed, and a diagnosis was made.
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- 2016
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31. Using Machine Learning to Predict Laboratory Test Results
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Jason M. Baron, Anand S. Dighe, Peter Szolovits, and Yuan Luo
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Adult ,Male ,0301 basic medicine ,Computer science ,Machine learning ,computer.software_genre ,Clinical decision support system ,Decision Support Techniques ,Machine Learning ,03 medical and health sciences ,0302 clinical medicine ,Humans ,In patient ,Imputation (statistics) ,Aged ,biology ,business.industry ,General Medicine ,Middle Aged ,Decision Support Systems, Clinical ,Test (assessment) ,Ferritin ,Laboratory test ,030104 developmental biology ,030220 oncology & carcinogenesis ,Clinical diagnosis ,Ferritins ,biology.protein ,Female ,Artificial intelligence ,business ,computer ,Algorithms ,Test data - Abstract
Objectives While clinical laboratories report most test results as individual numbers, findings, or observations, clinical diagnosis usually relies on the results of multiple tests. Clinical decision support that integrates multiple elements of laboratory data could be highly useful in enhancing laboratory diagnosis. Methods Using the analyte ferritin in a proof of concept, we extracted clinical laboratory data from patient testing and applied a variety of machine-learning algorithms to predict ferritin test results using the results from other tests. We compared predicted with measured results and reviewed selected cases to assess the clinical value of predicted ferritin. Results We show that patient demographics and results of other laboratory tests can discriminate normal from abnormal ferritin results with a high degree of accuracy (area under the curve as high as 0.97, held-out test data). Case review indicated that predicted ferritin results may sometimes better reflect underlying iron status than measured ferritin. Conclusions These findings highlight the substantial informational redundancy present in patient test results and offer a potential foundation for a novel type of clinical decision support aimed at integrating, interpreting, and enhancing the diagnostic value of multianalyte sets of clinical laboratory test results.
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- 2016
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32. Different tracks for pathology informatics fellowship training: Experiences of and input from trainees in a large multisite fellowship program
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Bruce P Levy, David S McClintock, Roy E Lee, William J Lane, Veronica E Klepeis, Jason M Baron, Maristela L Onozato, JiYeon Kim, Victor Brodsky, Bruce Beckwith, Frank Kuo, and John R Gilbertson
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Clinical informatics training ,clinical informatics ,fellowship tracks ,informatics fellowship training ,informatics teaching ,pathology informatics fellowship ,pathology informatics training ,pathology informatics ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Pathology Informatics is a new field; a field that is still defining itself even as it begins the formalization, accreditation, and board certification process. At the same time, Pathology itself is changing in a variety of ways that impact informatics, including subspecialization and an increased use of data analysis. In this paper, we examine how these changes impact both the structure of Pathology Informatics fellowship programs and the fellows′ goals within those programs. Materials and Methods: As part of our regular program review process, the fellows evaluated the value and effectiveness of our existing fellowship tracks (Research Informatics, Clinical Two-year Focused Informatics, Clinical One-year Focused Informatics, and Clinical 1 + 1 Subspecialty Pathology and Informatics). They compared their education, informatics background, and anticipated career paths and analyzed them for correlations between those parameters and the fellowship track chosen. All current and past fellows of the program were actively involved with the project. Results: Fellows′ anticipated career paths correlated very well with the specific tracks in the program. A small set of fellows (Clinical - one or two year - Focused Informatics tracks) anticipated clinical careers primarily focused in informatics (Director of Informatics). The majority of the fellows, however, anticipated a career practicing in a Pathology subspecialty, using their informatics training to enhance that practice (Clinical 1 + 1 Subspecialty Pathology and Informatics Track). Significantly, all fellows on this track reported they would not have considered a Clinical Two-year Focused Informatics track if it was the only track offered. The Research and the Clinical One-year Focused Informatics tracks each displayed unique value for different situations. Conclusions: It seems a "one size fits all" fellowship structure does not fit the needs of the majority of potential Pathology Informatics candidates. Increasingly, these fellowships must be able to accommodate the needs of candidates anticipating a wide range of Pathology Informatics career paths, be able to accommodate Pathology′s increasingly subspecialized structure, and do this in a way that respects the multiple fellowships needed to become a subspecialty pathologist and informatician. This is further complicated as Pathology Informatics begins to look outward and takes its place in the growing, and still ill-defined, field of Clinical Informatics, a field that is not confined to just one medical specialty, to one way of practicing medicine, or to one way of providing patient care.
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- 2012
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33. A core curriculum for clinical fellowship training in pathology informatics
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David S McClintock, Bruce P Levy, William J Lane, Roy E Lee, Jason M Baron, Veronica E Klepeis, Maristela L Onozato, JiYeon Kim, Anand S Dighe, Bruce A Beckwith, Frank Kuo, Stephen Black-Schaffer, and John R Gilbertson
- Subjects
Clinical informatics curriculum ,clinical informatics teaching ,informatics core content ,informatics curriculum ,pathology informatics core content ,pathology informatics curriculum ,pathology informatics definition ,pathology informatics fellowship ,pathology informatics teaching ,pathology informatics ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: In 2007, our healthcare system established a clinical fellowship program in Pathology Informatics. In 2010 a core didactic course was implemented to supplement the fellowship research and operational rotations. In 2011, the course was enhanced by a formal, structured core curriculum and reading list. We present and discuss our rationale and development process for the Core Curriculum and the role it plays in our Pathology Informatics Fellowship Training Program. Materials and Methods: The Core Curriculum for Pathology Informatics was developed, and is maintained, through the combined efforts of our Pathology Informatics Fellows and Faculty. The curriculum was created with a three-tiered structure, consisting of divisions, topics, and subtopics. Primary (required) and suggested readings were selected for each subtopic in the curriculum and incorporated into a curated reading list, which is reviewed and maintained on a regular basis. Results: Our Core Curriculum is composed of four major divisions, 22 topics, and 92 subtopics that cover the wide breadth of Pathology Informatics. The four major divisions include: (1) Information Fundamentals, (2) Information Systems, (3) Workflow and Process, and (4) Governance and Management. A detailed, comprehensive reading list for the curriculum is presented in the Appendix to the manuscript and contains 570 total readings (current as of March 2012). Discussion: The adoption of a formal, core curriculum in a Pathology Informatics fellowship has significant impacts on both fellowship training and the general field of Pathology Informatics itself. For a fellowship, a core curriculum defines a basic, common scope of knowledge that the fellowship expects all of its graduates will know, while at the same time enhancing and broadening the traditional fellowship experience of research and operational rotations. For the field of Pathology Informatics itself, a core curriculum defines to the outside world, including departments, companies, and health systems considering hiring a pathology informatician, the core knowledge set expected of a person trained in the field and, more fundamentally, it helps to define the scope of the field within Pathology and healthcare in general.
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- 2012
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34. Pathology informatics fellowship retreats: The use of interactive scenarios and case studies as pathology informatics teaching tools
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Roy E Lee, David S McClintock, Ulysses J Balis, Jason M Baron, Michael J Becich, Bruce A Beckwith, Victor B Brodsky, Alexis B Carter, Anand S Dighe, Mehrvash Haghighi, Jason D Hipp, Walter H Henricks, Jiyeon Y Kim, Veronica E Klepseis, Frank C Kuo, William J Lane, Bruce P Levy, Maristela L Onozato, Seung L Park, John H Sinard, Mark J Tuthill, and John R Gilbertson
- Subjects
Case study method ,clinical informatics training ,clinical informatics ,informatics fellowship training ,informatics teaching ,pathology informatics fellowship ,pathology informatics training ,pathology informatics ,retreats ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Last year, our pathology informatics fellowship added informatics-based interactive case studies to its existing educational platform of operational and research rotations, clinical conferences, a common core curriculum with an accompanying didactic course, and national meetings. Methods: The structure of the informatics case studies was based on the traditional business school case study format. Three different formats were used, varying in length from short, 15-minute scenarios to more formal multiple hour-long case studies. Case studies were presented over the course of three retreats (Fall 2011, Winter 2012, and Spring 2012) and involved both local and visiting faculty and fellows. Results: Both faculty and fellows found the case studies and the retreats educational, valuable, and enjoyable. From this positive feedback, we plan to incorporate the retreats in future academic years as an educational component of our fellowship program. Conclusions: Interactive case studies appear to be valuable in teaching several aspects of pathology informatics that are difficult to teach in more traditional venues (rotations and didactic class sessions). Case studies have become an important component of our fellowship′s educational platform.
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- 2012
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35. A novel strategy for evaluating the effects of an electronic test ordering alert message: Optimizing cardiac marker use
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Jason M Baron, Kent B Lewandrowski, Irina K Kamis, Balaji Singh, Sidi M Belkziz, and Anand S Dighe
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Cardiac marker ,ck-mb ,computerized provider order entry ,laboratory utilization ,ordering alert ,POE ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Background: Laboratory ordering functions within computerized provider order entry (CPOE) systems typically support the display of electronic alert messages to improve test utilization or implement new ordering policies. However, alert strategies have been shown to vary considerably in their success and the characteristics contributing to an alert′s success are poorly understood. Improved methodologies are needed to evaluate alerts and their mechanisms of action. Materials and Methods: Clinicians order inpatient and emergency department laboratory tests using our institutional CPOE system. We analyzed user interaction data captured by our CPOE system to evaluate how clinicians responded to an alert. We evaluated an alert designed to implement an institutional policy restricting the indications for ordering creatine kinase-MB (CKMB). Results: Within 2 months of alert implementation, CKMB-associated searches declined by 79% with a corresponding decline in CKMB orders. Furthermore, while prior to alert implementation, clinicians searching for CKMB ultimately ordered this test 99% of the time, following implementation, only 60% of CKMB searches ultimately led to CKMB test orders. This difference presumably represents clinicians who reconsidered the need for CKMB in response to the alert, demonstrating the alert′s just-in-time advisory capability. In addition, as clinicians repeatedly viewed the alert, there was a "dose-dependant" decrease in the fraction of searches without orders. This presumably reflects the alerting strategy′s long-term educational component, as clinicians aware of the new policy will not search for CKMB when not indicated. Conclusions: Our analytic approach provides insight into the mechanism of a CPOE alert and demonstrates that alerts may act through a combination of just-in-time advice and longer term education. Use of this approach when implementing alerts may prove useful to improve the success of a given alerting strategy.
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- 2012
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36. Computerized provider order entry in the clinical laboratory
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Jason M Baron and Anand S Dighe
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Computerized provider order entry ,laboratory operations ,test utilization ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Pathology ,RB1-214 - Abstract
Clinicians have traditionally ordered laboratory tests using paper-based orders and requisitions. However, paper orders are becoming increasingly incompatible with the complexities, challenges, and resource constraints of our modern healthcare systems and are being replaced by electronic order entry systems. Electronic systems that allow direct provider input of diagnostic testing or medication orders into a computer system are known as Computerized Provider Order Entry (CPOE) systems. Adoption of laboratory CPOE systems may offer institutions many benefits, including reduced test turnaround time, improved test utilization, and better adherence to practice guidelines. In this review, we outline the functionality of various CPOE implementations, review the reported benefits, and discuss strategies for using CPOE to improve the test ordering process. Further, we discuss barriers to the implementation of CPOE systems that have prevented their more widespread adoption.
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- 2011
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37. Applying Lean methodologies reduces ED laboratory turnaround times
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Jason M. Baron, Carlos A. Camargo, Anand S. Dighe, David F.M. Brown, and Benjamin A. White
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Adult ,Gerontology ,medicine.medical_specialty ,Time Factors ,Urinalysis ,Process improvement ,Efficiency, Organizational ,Article ,Workflow ,medicine ,Humans ,Prospective Studies ,Troponin T ,medicine.diagnostic_test ,business.industry ,General Medicine ,Emergency department ,Laboratories, Hospital ,Quality Improvement ,Confidence interval ,Health care delivery ,Emergency medicine ,Emergency Medicine ,Ergonomics ,Sample collection ,Emergency Service, Hospital ,business ,Health care quality - Abstract
Background Increasing the value of health care delivery is a national priority, and providers face growing pressure to reduce cost while improving quality. Ample opportunity exists to increase efficiency and quality simultaneously through the application of systems engineering science. Objective We examined the hypothesis that Lean-based reorganization of laboratory process flow would improve laboratory turnaround times (TAT) and reduce waste in the system. Methods This study was a prospective, before-after analysis of laboratory process improvement in a teaching hospital emergency department (ED). The intervention included a reorganization of laboratory sample flow based in systems engineering science and Lean methodologies, with no additional resources. The primary outcome was the median TAT from sample collection to result for 6 tests previously performed in an ED kiosk. Results After the intervention, median laboratory TAT decreased across most tests. The greatest decreases were found in "reflex tests" performed after an initial screening test: troponin T TAT was reduced by 33 minutes (86 to 53 minutes; 99% confidence interval, 30-35 minutes) and urine sedimentation TAT by 88 minutes (117 to 29 minutes; 99% confidence interval, 87-90 minutes). In addition, troponin I TAT was reduced by 12 minutes, urinalysis by 9 minutes, and urine human chorionic gonadotropin by 10 minutes. Microbiology rapid testing TAT, a "control," did not change. Conclusions In this study, Lean-based reorganization of laboratory process flow significantly increased process efficiency. Broader application of systems engineering science might further improve health care quality and capacity while reducing waste and cost.
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- 2015
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38. Case 4-2015
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Jason M. Baron and Cynthia M. Cooper
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medicine.medical_specialty ,Obtundation ,business.industry ,Diagnostic test ,General Medicine ,medicine.disease ,QT interval ,Case records ,Pill ,Emergency medicine ,cardiovascular system ,medicine ,cardiovascular diseases ,medicine.symptom ,General hospital ,business ,Intensive care medicine ,circulatory and respiratory physiology ,Acidosis - Abstract
A 49-year-old man was admitted to this hospital after being found unresponsive outdoors; he was next to a half-filled bottle of cloudy liquid with pill fragments. An electrocardiogram showed a QTc interval of 501 msec. A diagnostic test was performed.
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- 2015
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39. Implementation of an expanded point-of-care site inspection checklist in an academic medical center: An eight year experience
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Kent B. Lewandrowski, Simran Khanna, Jason M. Baron, and Kimberly Gregory
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Time Factors ,Point-of-care testing ,Point-of-Care Systems ,education ,Clinical Biochemistry ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,Humans ,Point of care ,Retrospective Studies ,Retrospective review ,Academic Medical Centers ,Laboratory management ,business.industry ,Biochemistry (medical) ,General Medicine ,030224 pathology ,medicine.disease ,humanities ,Checklist ,stomatognathic diseases ,030220 oncology & carcinogenesis ,Medical emergency ,business - Abstract
We evaluated the effectiveness of an expanded point-of-care (POCT) site inspection checklist over an extended 8-y period.A retrospective review of site inspection deficiency reports in a large academic medical center from 2010 to 2017 (year to date).There was a significant decrease in the number of cited deficiencies per site/inspection from 2010 (3.17) to 2017 (0.27) (p0.001). The percentage of sites without deficiencies steadily increased from 2010 (8.7%) to 2017 (80.7%) (p0.001). The most common citation was documentation of competency assessment followed by results documentation and annual procedure review.Regular inspections of sites performing POCT are necessary to maintain regulatory compliance. Over time significant improvements in compliance are achievable.
- Published
- 2017
40. Case 3-2017: A Man with Cardiac Sarcoidosis and New Diplopia and Weakness
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James G. Flood, Jason M. Baron, and Anand S. Dighe
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Diplopia ,Male ,medicine.medical_specialty ,Weakness ,Sarcoidosis ,business.industry ,MEDLINE ,General Medicine ,Cardiac sarcoidosis ,medicine.disease ,Dermatology ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,030212 general & internal medicine ,medicine.symptom ,business ,Cardiomyopathies ,030217 neurology & neurosurgery - Published
- 2017
41. Implementation of Point-of-Care Testing in an Ambulatory Practice of an Academic Medical Center
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Nicole Lewandrowski, Kent B. Lewandrowski, J. Benjamin Crocker, Jason M. Baron, Kimberly Gregory, and Elizabeth Lee-Lewandrowski
- Subjects
Adult ,Academic Medical Centers ,medicine.medical_specialty ,business.industry ,Cost effectiveness ,Point-of-Care Systems ,Point-of-care testing ,Comprehensive metabolic panel ,Efficiency ,General Medicine ,Primary care ,Middle Aged ,Laboratories, Hospital ,Turnaround time ,Cost Savings ,Ambulatory ,Emergency medicine ,Ambulatory Care ,Humans ,Medicine ,Revenue ,Operational efficiency ,business - Abstract
Objectives: Point-of-care laboratory testing (POCT) offers reduced turnaround time and may promote improved operational efficiency. Few studies have been reported that document improvements from implementing POCT in primary care. Methods: We measured metrics of practice efficiency in a primary care practice before and after implementation of POCT, including the total number of tests ordered, letters and phone calls to patients, and revisits due to abnormal test results. We performed a cost and revenue analysis. Results: Following implementation of POCT, there was a 21% decrease in tests ordered per patient ( P < .0001); a decrease in follow-up phone calls and letters by 89% and 85%, respectively ( P < .0001 and P < .0001); and a 61% decrease in patient revisits ( P = .0002). Estimated testing revenues exceeded expenses by $6.62 per patient, and potential cost savings from improved efficiency were $24.64 per patient. Conclusions: POCT can significantly improve clinical operations with cost reductions through improved practice efficiency.
- Published
- 2014
- Full Text
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42. Measurement of High-Sensitivity Troponin T in Noncardiac Medical Intensive Care Unit Patients
- Author
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Kent B. Lewandrowski, Ednan K. Bajwa, Elizabeth Lee Lewandrowski, Jason M. Baron, B. Taylor Thompson, and James L. Januzzi
- Subjects
medicine.medical_specialty ,biology ,Troponin T ,business.industry ,Critically ill ,Clinical course ,General Medicine ,High Sensitivity Troponin T ,Troponin ,Intensive care unit ,law.invention ,Correlation ,Medical intensive care unit ,law ,Internal medicine ,biology.protein ,Cardiology ,Medicine ,business - Abstract
Objectives: To assess the frequency, magnitude, and prognostic significance of elevations in cardiac troponin T in noncardiac critically ill patients, including elevations at levels below the limit of detection of traditional assays. Methods: Using a high-sensitivity assay, we measured troponin T (high-sensitivity troponin T [hsTnT]) in 451 unique patients within 12 hours of their admission to a noncardiac medical intensive care unit. Outcomes of patients, grouped by hsTnT level, were compared. Results: Overall, 98% of the study patients had detectable levels of hsTnT (>3 ng/L), and 33% had levels above the diagnostic cutoff of a traditional fourth-generation cardiac troponin T assay. Patient groups with higher hsTnT levels had markedly higher rates of in-hospital mortality ( P < .001) and longer stays in the hospital and intensive care unit ( P < .01). Conclusions: In noncardiac critically ill patients, cardiac troponin T elevations are common but often at levels undetectable by traditional assays. hsTnT elevations predict a more complex clinical course and an increased risk of death.
- Published
- 2014
- Full Text
- View/download PDF
43. The role of informatics and decision support in utilization management
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Jason M. Baron and Anand S. Dighe
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Decision support system ,Knowledge management ,Clinical Laboratory Techniques ,business.industry ,Computer science ,fungi ,Biochemistry (medical) ,Clinical Biochemistry ,General Medicine ,Clinical Laboratory Services ,Decision Support Systems, Clinical ,computer.software_genre ,Biochemistry ,Clinical decision support system ,Software deployment ,Analytics ,Middleware (distributed applications) ,Informatics ,Information system ,Humans ,Clinical Laboratory Information Systems ,business ,computer ,Utilization management - Abstract
Information systems provide a critical link between clinical laboratories and the clinicians and patients they serve. Strategic deployment of informatics resources can enable a wide array of utilization initiatives and can substantially improve the appropriateness of test selection and results interpretation. In this article, we review information systems including computerized provider order entry (CPOE) systems, laboratory information systems (LISs), electronic health records (EHRs), laboratory middleware, knowledge management systems and systems for data extraction and analysis, and describe the role that each can play in utilization management. We also discuss specific utilization strategies that laboratories can employ within these systems, citing examples both from our own institution and from the literature. Finally, we review how emerging applications of decision support technologies may help to further refine test utilization, "personalize" laboratory diagnosis, and enhance the diagnostic value of laboratory testing.
- Published
- 2014
- Full Text
- View/download PDF
44. Using Machine Learning to Triage Bone Marrow Specimens to Improve Performance of Plasma Cell Disorder FISH Testing
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Grace Linder, Jason M. Baron, and Aliyah R. Sohani
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medicine.medical_specialty ,business.industry ,Trees (plant) ,General Medicine ,medicine.disease ,Triage ,medicine.anatomical_structure ,Plasma cell disorder ,medicine ,Plasmacytoma ,%22">Fish ,Predictor variable ,Bone marrow ,Radiology ,business ,Multiple myeloma - Published
- 2018
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45. Utilization Management in the Clinical Laboratory: An Introduction and Overview
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Anand S. Dighe, Jason M. Baron, and Kent B. Lewandrowski
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Economic growth ,business.industry ,media_common.quotation_subject ,Control (management) ,Payment ,Gross domestic product ,Toolbox ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Health care ,Institution ,030212 general & internal medicine ,Business ,Utilization management ,Reimbursement ,media_common - Abstract
Expenditures for heath care in developed economies have been rising steadily over the past decades and have become unsustainable in many countries. This is particularly true in the United States (US) where the country spends more on health care as a percent of gross domestic product that any other country. Changes to the US system of reimbursement for medical services are gradually eroding the traditional fee-for-service model in favor of global payments for episodes of care or even entire populations of patients. In this environment utilization management is gaining an increasingly important role in efforts to control cost and improve the quality of care. This chapter introduces many of the key topics in utilization management and provides a “toolbox” of strategies to support implementation of utilization management initiatives. Many examples of successful initiatives in the literature and in our institution will be described. Further details are provided in the accompanying chapters of this book.
- Published
- 2016
- Full Text
- View/download PDF
46. Informatics, Analytics, and Decision Support in Utilization Management
- Author
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Jason M. Baron
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Software analytics ,Decision support system ,Knowledge management ,Computer science ,business.industry ,Analytics ,Informatics ,Information system ,Leverage (statistics) ,business ,Clinical decision support system ,Utilization management - Abstract
Informatics underlies some of the most effective laboratory utilization management tools. For example, computerized provider order entry systems often offer clinical decision support functionality that utilization management teams can leverage to provide clinicians “just-in-time” test-ordering advice and alerts. Likewise clinical and production data can be extracted from laboratory and clinical information systems and analyzed to identify utilization improvement opportunities, guide utilization management strategies, and monitor the impact of utilization management initiatives. This chapter will review applications of informatics to utilization management. More specifically, the chapter will begin with a discussion of clinical decision support, including testing guidelines and algorithms, and various types of electronic alerts. It will also include some discussion of the information systems that underlie many types of decision support. The chapter will next discuss data analytics and will describe strategies to develop informative utilization metrics and use them to measure the impact of utilization management initiatives. Likewise, it will discuss the use of analytics to identify misutilization, target utilization improvement initiatives, and provide valuable feedback to clinicians. The chapter will conclude with a discussion of practical considerations.
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- 2016
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47. The Use of Physician Profiling and Prior Approval (Gatekeeping) in Utilization Management in the Clinical Laboratory
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Kent B. Lewandrowski and Jason M. Baron
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medicine.medical_specialty ,business.industry ,media_common.quotation_subject ,Physician profiling ,Control (management) ,030204 cardiovascular system & hematology ,Gatekeeping ,Compliance (psychology) ,Clinical Practice ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Family medicine ,Medicine ,Quality (business) ,business ,Utilization management ,media_common - Abstract
Physician profiling is a technique that can be used to identify variations in practice among physicians. These data have been employed to control costs, improve quality, and assess compliance with practice guidelines. Physician profiling is frequently criticized for producing unreliable or misleading data that fails to reflect the realities of actual clinical practice.
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- 2016
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48. ST2 Predicts Mortality and Length of Stay in a Critically Ill Noncardiac Intensive Care Unit Population
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Elizabeth Lee Lewandrowski, Kent B. Lewandrowski, Joseph W Rudolf, Jason M. Baron, Ednan K. Bajwa, and James L. Januzzi
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0301 basic medicine ,Male ,medicine.medical_specialty ,Multivariate analysis ,Critical Illness ,Population ,Disease ,030204 cardiovascular system & hematology ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Troponin T ,law ,Medicine ,Humans ,Hospital Mortality ,Medical diagnosis ,education ,Intensive care medicine ,Aged ,education.field_of_study ,business.industry ,General Medicine ,Length of Stay ,Middle Aged ,Prognosis ,Intensive care unit ,Interleukin-1 Receptor-Like 1 Protein ,Intensive Care Units ,030104 developmental biology ,Quartile ,Emergency medicine ,Multivariate Analysis ,Biomarker (medicine) ,Female ,business ,Biomarkers - Abstract
Objectives: The biomarker suppression of tumorigenicity 2 (ST2) is a well-established clinical biomarker of cardiac strain and is frequently elevated in a variety of cardiac conditions. Here, we sought to evaluate the prognostic value of ST2 in critically ill medical intensive care unit (MICU) patients without primary cardiac illness. Methods: We measured ST2 and high-sensitivity troponin T (hsTnT) on plasma specimens collected on 441 patients following admission to a noncardiac MICU and evaluated the prognostic power of ST2 both alone and in multivariate models. Results: Of these critically ill patients, 96% exhibited ST2 concentrations above the reference interval. ST2 concentrations were highly predictive of intensive care unit and hospital length of stay, as well as in-hospital mortality, with high concentrations predicting a poor prognosis. Rates of in-hospital mortality were more than four times higher in patients with ST2 concentrations in the highest compared with the lowest quartile. In multivariate analysis, ST2 remained an important predictor of death after adjustment for age, hsTnT, and common diagnoses. Conclusions: ST2 is increased and predictive of prognosis in critically ill patients without primary cardiac disease, suggesting that critically ill patients may often have unrecognized cardiac injury. Clinical decision support algorithms incorporating ST2 and hsTnT results may be useful in patient risk stratification.
- Published
- 2016
49. Detection of Preanalytic Laboratory Testing Errors Using a Statistically Guided Protocol
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Craig H. Mermel, Kent B. Lewandrowski, Anand S. Dighe, and Jason M. Baron
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Blood Glucose ,Protocol (science) ,Pathology ,medicine.medical_specialty ,Models, Statistical ,Medical Errors ,business.industry ,Decision Trees ,Decision tree ,Statistical model ,General Medicine ,Phlebotomy ,Laboratory testing ,Set (abstract data type) ,Artificial Intelligence ,Statistics ,Humans ,Medicine ,Clinical Competence ,Laboratories ,business ,Error detection and correction ,Spurious relationship ,Algorithms - Abstract
Preanalytic laboratory testing errors are often difficult to identify. We demonstrate how laboratories can integrate statistical models with clinical judgment to develop protocols for preanalytic error detection. Specifically, we developed a protocol to identify spuriously elevated glucose values resulting from improper "line draws" or related phlebotomy errors. Using a decision tree-generating algorithm and an annotated set of training data, we generated decision trees to classify critically elevated glucose results as "real" or "spurious" based on available laboratory parameters. Decision trees revealed that a 30-day patient-specific average glucose concentration lower than 186.3 mg/dL (10.3 mmol/L), a current glucose concentration higher than 663 mg/dL (37 mmol/L), and an anion gap lower than 16.5 mEq/L (16.5 mmol/L) suggested a spurious result. We then used the results from the decision tree analysis to inform the implementation of a clinical protocol that significantly improved the laboratory's identification of spurious results. Similar approaches may be useful in developing protocols to identify other errors or to assist in clinical interpretation of results.
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- 2012
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50. The Trazodone Metabolite meta-Chlorophenylpiperazine Can Cause False-Positive Urine Amphetamine Immunoassay Results
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James G. Flood, Jason M. Baron, William H. Long, David A. Griggs, and Andrea L. Nixon
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Substance-Related Disorders ,Health, Toxicology and Mutagenesis ,Metabolite ,Urine ,Pharmacology ,Toxicology ,Piperazines ,Analytical Chemistry ,chemistry.chemical_compound ,medicine ,meta-Chlorophenylpiperazine ,Humans ,Environmental Chemistry ,False Positive Reactions ,Amphetamine ,Immunoassay ,Chemical Health and Safety ,medicine.diagnostic_test ,business.industry ,Trazodone ,MDMA ,Methamphetamine ,Substance Abuse Detection ,Anti-Anxiety Agents ,chemistry ,business ,psychological phenomena and processes ,medicine.drug - Abstract
Amphetamines and methamphetamines are part of an important class of drugs included in most urine drugs of abuse screening panels, and a common assay to detect these drugs is the Amphetamines II immunoassay (Roche Diagnostics). To demonstrate that meta-chlorophenylpiperazine (m-CPP), a trazodone metabolite, cross-reacts in the Amphetamines II assay, we tested reference standards of m-CPP at various concentrations (200 to 20,000 g/L). We also tested real patient urine samples containing m-CPP (detected and quantified by HPLC) with no detectable amphetamine, methamphetamine, or MDMA (demonstrated by GC MS). In both the m-CPP standards and the patient urine samples, we found a strong association between m-CPP concentration and Amphetamines II immunoreactivity (r = 0.990 for the urine samples). Further, we found that patients taking trazodone can produce urine with sufficient m-CPP to result in false-positive Amphetamines II results. At our institution, false-positive amphetamine results occur not infrequently in patients taking trazodone with at least 8 trazodone-associated false-positive results during a single 26-day period. Laboratories should remain cognizant of this interference when interpreting results of this assay.
- Published
- 2011
- Full Text
- View/download PDF
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