2,682 results on '"Jayashankar A"'
Search Results
2. Advancing Employee Behavior Analysis through Synthetic Data: Leveraging ABMs, GANs, and Statistical Models for Enhanced Organizational Efficiency
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Jayashankar, Rakshitha and Balan, Mahesh
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Computer Science - Machine Learning ,Computer Science - Formal Languages and Automata Theory ,Statistics - Other Statistics - Abstract
Success in todays data-driven corporate climate requires a deep understanding of employee behavior. Companies aim to improve employee satisfaction, boost output, and optimize workflow. This research study delves into creating synthetic data, a powerful tool that allows us to comprehensively understand employee performance, flexibility, cooperation, and team dynamics. Synthetic data provides a detailed and accurate picture of employee activities while protecting individual privacy thanks to cutting-edge methods like agent-based models (ABMs), Generative Adversarial Networks (GANs), and statistical models. Through the creation of multiple situations, this method offers insightful viewpoints regarding increasing teamwork, improving adaptability, and accelerating overall productivity. We examine how synthetic data has evolved from a specialized field to an essential resource for researching employee behavior and enhancing management efficiency. Keywords: Agent-Based Model, Generative Adversarial Network, workflow optimization, organizational success, Comment: 8 Pages, 5 figures, 1 github link
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- 2024
3. RF Challenge: The Data-Driven Radio Frequency Signal Separation Challenge
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Lancho, Alejandro, Weiss, Amir, Lee, Gary C. F., Jayashankar, Tejas, Kurien, Binoy, Polyanskiy, Yury, and Wornell, Gregory W.
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Electrical Engineering and Systems Science - Signal Processing ,Computer Science - Machine Learning - Abstract
This paper addresses the critical problem of interference rejection in radio-frequency (RF) signals using a novel, data-driven approach that leverages state-of-the-art AI models. Traditionally, interference rejection algorithms are manually tailored to specific types of interference. This work introduces a more scalable data-driven solution and contains the following contributions. First, we present an insightful signal model that serves as a foundation for developing and analyzing interference rejection algorithms. Second, we introduce the RF Challenge, a publicly available dataset featuring diverse RF signals along with code templates, which facilitates data-driven analysis of RF signal problems. Third, we propose novel AI-based rejection algorithms, specifically architectures like UNet and WaveNet, and evaluate their performance across eight different signal mixture types. These models demonstrate superior performance exceeding traditional methods like matched filtering and linear minimum mean square error estimation by up to two orders of magnitude in bit-error rate. Fourth, we summarize the results from an open competition hosted at 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2024) based on the RF Challenge, highlighting the significant potential for continued advancements in this area. Our findings underscore the promise of deep learning algorithms in mitigating interference, offering a strong foundation for future research., Comment: 14 pages, 12 figures, submitted to the IEEE Open Journal of the Communications Society
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- 2024
4. Enhancing the Harrow-Hassidim-Lloyd (HHL) algorithm in systems with large condition numbers
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Tsemo, Peniel Bertrand, Jayashankar, Akshaya, Sugisaki, K., Baskaran, Nishanth, Chakraborty, Sayan, and Prasannaa, V. S.
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Physics - Atomic Physics ,Physics - Chemical Physics ,Quantum Physics - Abstract
Although the Harrow-Hassidim-Lloyd (HHL) algorithm offers an exponential speedup in system size for treating linear equations of the form $A\vec{x}=\vec{b}$ on quantum computers when compared to their traditional counterparts, it faces a challenge related to the condition number ($\mathcal{\kappa}$) scaling of the $A$ matrix. In this work, we address the issue by introducing the post-selection-improved HHL (Psi-HHL) approach that involves a simple yet effective modification of the HHL algorithm to extract a feature of $|x\rangle$, and which leads to achieving optimal behaviour in $\mathcal{\kappa}$ (linear scaling) for large condition number situations. This has the important practical implication of having to use substantially fewer shots relative to the traditional HHL algorithm. We carry out two sets of simulations, where we go up to 26-qubit calculations, to demonstrate the ability of Psi-HHL to handle situations involving large $\mathcal{\kappa}$ matrices via: (a) a set of toy matrices, for which we go up to size $64 \times 64$ and $\mathcal{\kappa}$ values of up to $\approx$ 1 million, and (b) a deep-dive into quantum chemistry, where we consider matrices up to size $256 \times 256$ that reach $\mathcal{\kappa}$ of about 466. The molecular systems that we consider are Li$_{\mathrm{2}}$, RbH, and CsH. Although the feature of $|x\rangle$ considered in our examples is an overlap between the input and output states of the HHL algorithm, our approach is general and can be applied in principle to any transition matrix element involving $|x\rangle$., Comment: Minor edits over v2
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- 2024
5. Unveiling the Dynamics of Employee Behavior Through Wolframs Cellular Automata
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Jayashankar, Rakshitha and Balan, Mahesh
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Nonlinear Sciences - Cellular Automata and Lattice Gases - Abstract
Understanding employee behavior in a workplace is critical for enhancing overall organizational performance. Despite numerous efforts to improve work environments, many organizations still need help with challenges primarily rooted in unaddressed issues or poorly understood behavioral patterns. In this paper, we have focused on recognizing this pattern and the dynamics of complex systems in organizational behavior and studying how factors influence the systems overall behavior using Wolframs Cellular Automata theory. Over the cycle, we observe how leadership influences team dynamics, influences the organization, and drives employee behavior to foster a positive environment. Keywords: Cellular Automata, Employee Behavior, team dynamics, Leadership Influence., Comment: 7 Pages, 5 Figures, Links to Github repository
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- 2024
6. Motor Signature Differences Between Autism Spectrum Disorder and Developmental Coordination Disorder, and Their Neural Mechanisms
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Butera, Christiana, Delafield-Butt, Jonathan, Lu, Szu-Ching, Sobota, Krzysztof, McGowan, Timothy, Harrison, Laura, Kilroy, Emily, Jayashankar, Aditya, and Aziz-Zadeh, Lisa
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- 2025
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7. Cinnamon: A Framework for Scale-Out Encrypted AI.
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Siddharth Jayashankar, Edward Chen, Tom Tang, Wenting Zheng, and Dimitrios Skarlatos 0002
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- 2025
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8. Impact of Learning and Development on Talent Retention in the Digital Era (A Study with Reference to Private Sector Banks)
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Meenakshi, N., Shashi Kumar, M., Eshwari, B., Jayashankar, J., Chandrakhanthan, J., Kacprzyk, Janusz, Series Editor, Novikov, Dmitry A., Editorial Board Member, Shi, Peng, Editorial Board Member, Cao, Jinde, Editorial Board Member, Polycarpou, Marios, Editorial Board Member, Pedrycz, Witold, Editorial Board Member, Hamdan, Allam, editor, and Braendle, Udo, editor
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- 2025
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9. The impact of market orientation and brand storytelling on Shark Tank evaluations – a B2B and large language modeling perspective
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Jayashankar, Priyanka, Roy, Tirtho, Chattopadhyay, Souradeep, Arshad, Muhammad Arbab, and Sarkar, Soumik
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- 2025
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10. OM Forum - Operations Management Research: Relevance and Impact.
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Jayashankar M. Swaminathan
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- 2025
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11. Prevalence of multidrug-resistant Klebsiella pneumoniae in urinary tract infections: A retrospective observational study in eastern India
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Swayamprabha Sahoo, Jatindra Mohanty, Sweta Routray, Ashirbad Sarangi, Debasish Nayak, Sejal Shah, Jayashankar Das, Enketeswara Subudhi, and Tripti Swarnkar
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multidrug-resistant ,klebsiella pneumonia ,urinary tract infection (uti) ,healthcare management ,gram-negative bacteria ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background: Urinary tract infection (UTI) commonly affects people of different ages. It is important to explore the antibiotic susceptibility of the bacterial agents to improve the empirical antibacterial prescription to tackle the fast emerging of multi-drug resistant (MDR) bacteria. Klebsiella pneumoniae, a Gram-negative bacterium, is widely known for its hypervirulence, drug resistance and opportunistic nature, with significant implications for critically ill or immunocompromised patients. The study aim is to determine the prevalence of antibiotic resistance pattern among isolates from urinary tract infections (UTIs) and provide valuable insights for healthcare management. Methods: This is a retrospective observational study including 250 patients among 500 sample screened to have UTI at the largest hospital in eastern India from July 2020 to November 2022. All UTI patients underwent agar-based bacterium identification and antibiotic sensitivity testing using the disc diffusion method. Results: Klebsiella pneumoniae (122 cases) and Escherichia coli (74) were the first and second most frequent Gram-negative isolates, followed by Pseudomonas aeruginosa (45) and Acinetobacter baumannii (9). Notably, ten Klebsiella pneumoniae strains were resistant to five major antibiotic classes: β-lactam, aminoglycosides, fluoroquinolones, tetracyclines, and polymyxin. piperacillin/tazobactam, ceftazidime, aztreonam, and imipenem exhibited high resistance rates when tested against Klebsiella pneumoniae isolates. In contrast, gentamicin, levofloxacin, minocycline, fosfomycin, and colistin demonstrated relatively lower effectiveness against Klebsiella pneumonia isolates. Conclusion: Monitoring of multidrug-resistant bacteria becomes critical for prudent antibiotic use, ultimately dropping the prevalence of hospital-acquired infections and contributing to the larger fight against antimicrobial resistance.
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- 2025
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12. Empirical Wavelet Transform Using MUSIC Algorithm for Near-Infrared Evaluation of Sinusitis
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Kamatchi, S., Swamynathan, Kudiyarasan, Jayashankar, Hasheetha, Vijayalakshmi, Sankaran, and Paramasivam, Alagumariappan
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- 2024
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13. The Importance of Multimodal Emotion Conditioning and Affect Consistency for Embodied Conversational Agents
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Chang, Che-Jui, Sohn, Samuel S., Zhang, Sen, Jayashankar, Rajath, Usman, Muhammad, and Kapadia, Mubbasir
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Computer Science - Human-Computer Interaction ,Computer Science - Artificial Intelligence ,Computer Science - Graphics - Abstract
Previous studies regarding the perception of emotions for embodied virtual agents have shown the effectiveness of using virtual characters in conveying emotions through interactions with humans. However, creating an autonomous embodied conversational agent with expressive behaviors presents two major challenges. The first challenge is the difficulty of synthesizing the conversational behaviors for each modality that are as expressive as real human behaviors. The second challenge is that the affects are modeled independently, which makes it difficult to generate multimodal responses with consistent emotions across all modalities. In this work, we propose a conceptual framework, ACTOR (Affect-Consistent mulTimodal behaviOR generation), that aims to increase the perception of affects by generating multimodal behaviors conditioned on a consistent driving affect. We have conducted a user study with 199 participants to assess how the average person judges the affects perceived from multimodal behaviors that are consistent and inconsistent with respect to a driving affect. The result shows that among all model conditions, our affect-consistent framework receives the highest Likert scores for the perception of driving affects. Our statistical analysis suggests that making a modality affect-inconsistent significantly decreases the perception of driving affects. We also observe that multimodal behaviors conditioned on consistent affects are more expressive compared to behaviors with inconsistent affects. Therefore, we conclude that multimodal emotion conditioning and affect consistency are vital to enhancing the perception of affects for embodied conversational agents.
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- 2023
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14. Neutralizing antibody correlate of protection against severe-critical COVID-19 in the ENSEMBLE single-dose Ad26.COV2.S vaccine efficacy trial
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Lindsay N. Carpp, Ollivier Hyrien, Youyi Fong, David Benkeser, Sanne Roels, Daniel J. Stieh, Ilse Van Dromme, Griet A. Van Roey, Avi Kenny, Ying Huang, Marco Carone, Adrian B. McDermott, Christopher R. Houchens, Karen Martins, Lakshmi Jayashankar, Flora Castellino, Obrimpong Amoa-Awua, Manjula Basappa, Britta Flach, Bob C. Lin, Christopher Moore, Mursal Naisan, Muhammed Naqvi, Sandeep Narpala, Sarah O’Connell, Allen Mueller, Leo Serebryannyy, Mike Castro, Jennifer Wang, Christos J. Petropoulos, Alex Luedtke, Yiwen Lu, Chenchen Yu, Michal Juraska, Nima S. Hejazi, Daniel N. Wolfe, Jerald Sadoff, Glenda E. Gray, Beatriz Grinsztejn, Paul A. Goepfert, Linda-Gail Bekker, Aditya H. Gaur, Valdilea G. Veloso, April K. Randhawa, Michele P. Andrasik, Jenny Hendriks, Carla Truyers, An Vandebosch, Frank Struyf, Hanneke Schuitemaker, Macaya Douoguih, James G. Kublin, Lawrence Corey, Kathleen M. Neuzil, Dean Follmann, Richard A. Koup, Ruben O. Donis, Peter B. Gilbert, On behalf of the Immune Assays Team, the Coronavirus Vaccine Prevention Network (CoVPN)/ENSEMBLE Team, and the United States Government (USG)/CoVPN Biostatistics Team
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Science - Abstract
Abstract Assessment of immune correlates of severe COVID-19 has been hampered by the low numbers of severe cases in COVID-19 vaccine efficacy (VE) trials. We assess neutralizing and binding antibody levels at 4 weeks post-Ad26.COV2.S vaccination as correlates of risk and of protection against severe-critical COVID-19 through 220 days post-vaccination in the ENSEMBLE trial (NCT04505722), constituting ~4.5 months longer follow-up than our previous correlates analysis and enabling inclusion of 42 severe-critical vaccine-breakthrough cases. Neutralizing antibody titer is a strong inverse correlate of severe-critical COVID-19, with estimated hazard ratio (HR) per 10-fold increase 0.35 (95% CI: 0.13, 0.90). In a multivariable model, HRs are 0.31 (0.11, 0.89) for neutralizing antibody titer and 1.22 (0.49, 3.02) for anti-Spike binding antibody concentration. VE against severe-critical COVID-19 rises with neutralizing antibody titer: 63.1% (95% CI: 40.0%, 77.3%) at unquantifiable [
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- 2024
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15. Analysis and functions of bioactive lipids in food
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Jayashankar Jayaprakash, Lipsa Rani Nath, Siddabasave Gowda B. Gowda, Divyavani Gowda, and Shu-Ping Hui
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Chromatography ,Food analysis ,Food bio-actives ,Lipids ,Mass spectrometry ,Nutrition. Foods and food supply ,TX341-641 - Abstract
Abstract Lipids are one of the major biomolecules of our life with diverse structures and functions. Dietary lipids are an essential source of nutrients and energy for humans. Even though the mechanisms of dietary lipid absorption and transport are unclear, numerous studies have demonstrated their biological importance in health and disease management. Fish is the major source of essential bioactive lipids called ω-3 fatty acids (docosahexaenoic acid and eicosapentaenoic acid) which have anti-inflammatory, antioxidant, and protective actions in cardiovascular diseases. Despite the various benefits of bioactive lipids derived from food, there is limited information in the literature discussing the sources, analysis, and function of food lipids. This review aims to cover the eight major categories of lipids and their key sources from plants, animals, microbiomes, and insect origin. Further, the aspects of various analytical technologies applied to determine the lipids in food and their anti-inflammatory, antioxidant, antimicrobial, and antiviral functions were discussed. This study offers a thorough overview of food lipid sources and their biological importance, including their analysis using various analytical techniques. Graphical abstract
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- 2024
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16. Differences in Praxis Errors in Autism Spectrum Disorder Compared to Developmental Coordination Disorder
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Gabriel Abrams, Aditya Jayashankar, Emily Kilroy, Christiana Butera, Laura Harrison, Priscilla Ring, Anusha Houssain, Alexis Nalbach, Sharon A. Cermak, and Lisa Aziz-Zadeh
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This study aimed to better understand how autism spectrum disorder (ASD) and developmental coordination disorder (DCD) differ in types of praxis errors made on the Florida Apraxia Battery Modified (FAB-M) and the potential relationships between praxis errors and social deficits in ASD. The ASD group made significantly more timing sequencing errors in imitation of meaningful gestures, as well as more body-part-for-tool errors during gesture-to-command compared to the other two groups. In the ASD group, increased temporal errors in meaningful imitation were significantly correlated with poorer affect recognition and less repetitive behaviors. Thus, in ASD, aspects of imitation ability are related to socioemotional skills and repetitive behaviors.
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- 2024
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17. Omicron COVID-19 immune correlates analysis of a third dose of mRNA-1273 in the COVE trial
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Zhang, Bo, Fong, Youyi, Fintzi, Jonathan, Chu, Eric, Janes, Holly E., Kenny, Avi, Carone, Marco, Benkeser, David, van der Laan, Lars W. P., Deng, Weiping, Zhou, Honghong, Wang, Xiaowei, Lu, Yiwen, Yu, Chenchen, Borate, Bhavesh, Chen, Haiyan, Reeder, Isabel, Carpp, Lindsay N., Houchens, Christopher R., Martins, Karen, Jayashankar, Lakshmi, Huynh, Chuong, Fichtenbaum, Carl J., Kalams, Spyros, Gay, Cynthia L., Andrasik, Michele P., Kublin, James G., Corey, Lawrence, Neuzil, Kathleen M., Priddy, Frances, Das, Rituparna, Girard, Bethany, El Sahly, Hana M., Baden, Lindsey R., Jones, Thomas, Donis, Ruben O., Koup, Richard A., Gilbert, Peter B., and Follmann, Dean
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- 2024
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18. Score-based Source Separation with Applications to Digital Communication Signals
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Jayashankar, Tejas, Lee, Gary C. F., Lancho, Alejandro, Weiss, Amir, Polyanskiy, Yury, and Wornell, Gregory W.
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Computer Science - Machine Learning ,Electrical Engineering and Systems Science - Signal Processing - Abstract
We propose a new method for separating superimposed sources using diffusion-based generative models. Our method relies only on separately trained statistical priors of independent sources to establish a new objective function guided by maximum a posteriori estimation with an $\alpha$-posterior, across multiple levels of Gaussian smoothing. Motivated by applications in radio-frequency (RF) systems, we are interested in sources with underlying discrete nature and the recovery of encoded bits from a signal of interest, as measured by the bit error rate (BER). Experimental results with RF mixtures demonstrate that our method results in a BER reduction of 95% over classical and existing learning-based methods. Our analysis demonstrates that our proposed method yields solutions that asymptotically approach the modes of an underlying discrete distribution. Furthermore, our method can be viewed as a multi-source extension to the recently proposed score distillation sampling scheme, shedding additional light on its use beyond conditional sampling. The project webpage is available at https://alpha-rgs.github.io, Comment: 34 pages, 18 figures, for associated project webpage see https://alpha-rgs.github.io
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- 2023
19. Navigating a Rare Neurological Conundrum: Quadriparesis in Neurocysticercosis With Hydrocephalus
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Mudamanchu Vamsi Krishna, Pubali Biswas, C. A. Jayashankar, V. H. Ganaraja, and Amey Joshi
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hydrocephalus ,neurocysticercosis ,quadriparesis ,Taenia solium ,Medicine ,Medicine (General) ,R5-920 - Abstract
ABSTRACT This case illustrates the diagnostic challenges in identifying neurocysticercosis, which is initially mistaken for tubercular arachnoiditis. Early recognition and multidisciplinary management are crucial for preventing severe complications. The case also describes the importance of awareness and timely treatment of neglected tropical diseases to improve patient outcomes.
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- 2025
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20. Self-Supervised Representations for Singing Voice Conversion
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Jayashankar, Tejas, Wu, Jilong, Sari, Leda, Kant, David, Manohar, Vimal, and He, Qing
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Electrical Engineering and Systems Science - Audio and Speech Processing - Abstract
A singing voice conversion model converts a song in the voice of an arbitrary source singer to the voice of a target singer. Recently, methods that leverage self-supervised audio representations such as HuBERT and Wav2Vec 2.0 have helped further the state-of-the-art. Though these methods produce more natural and melodic singing outputs, they often rely on confusion and disentanglement losses to render the self-supervised representations speaker and pitch-invariant. In this paper, we circumvent disentanglement training and propose a new model that leverages ASR fine-tuned self-supervised representations as inputs to a HiFi-GAN neural vocoder for singing voice conversion. We experiment with different f0 encoding schemes and show that an f0 harmonic generation module that uses a parallel bank of transposed convolutions (PBTC) alongside ASR fine-tuned Wav2Vec 2.0 features results in the best singing voice conversion quality. Additionally, the model is capable of making a spoken voice sing. We also show that a simple f0 shifting scheme during inference helps retain singer identity and bolsters the performance of our singing voice conversion model. Our results are backed up by extensive MOS studies that compare different ablations and baselines.
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- 2023
21. Adapting the HHL algorithm to quantum many-body theory
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Baskaran, Nishanth, Rawat, Abhishek Singh, Jayashankar, Akshaya, Chakravarti, Dibyajyoti, Sugisaki, K., Roy, Shibdas, Mandal, Sudhindu Bikash, Mukherjee, D., and Prasannaa, V. S.
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Quantum Physics ,Physics - Atomic Physics ,Physics - Chemical Physics - Abstract
Rapid progress in developing near- and long-term quantum algorithms for quantum chemistry has provided us with an impetus to move beyond traditional approaches and explore new ways to apply quantum computing to electronic structure calculations. In this work, we identify the connection between quantum many-body theory and a quantum linear solver, and implement the Harrow-Hassidim-Lloyd (HHL) algorithm to make precise predictions of correlation energies for light molecular systems via the (non-unitary) linearised coupled cluster theory. We alter the HHL algorithm to integrate two novel aspects- (a) we prescribe a novel scaling approach that allows one to scale any arbitrary symmetric positive definite matrix A, to solve for Ax = b and achieve x with reasonable precision, all the while without having to compute the eigenvalues of A, and (b) we devise techniques that reduce the depth of the overall circuit. In this context, we introduce the following variants of HHL for different eras of quantum computing- AdaptHHLite in its appropriate forms for noisy intermediate scale quantum (NISQ), late-NISQ, and the early fault-tolerant eras, as well as AdaptHHL for the fault-tolerant quantum computing era. We demonstrate the ability of the NISQ variant of AdaptHHLite to capture correlation energy precisely, while simultaneously being resource-lean, using simulation as well as the 11-qubit IonQ quantum hardware.
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- 2022
22. Neurocognitive assessment under various human-robot teaming environments.
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Anna L. Packy, Jayesh Jayashankar, Arya Teymourlouei, Joshua Stone, Hyuk Oh, Garrett E. Katz, James A. Reggia, and Rodolphe J. Gentili
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- 2024
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23. Assessment of a Novel Virtual Environment for Examining Cognitive-Motor Processes During Execution of Action Sequences in a Human-Robot Teaming Context.
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Jayesh Jayashankar, Anna L. Packy, Arya Teymourlouei, Alexandra A. Shaver, Garrett E. Katz, James A. Reggia, James Purtilo, and Rodolphe J. Gentili
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- 2024
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24. High throughput pretreatment of corn stover using compacted biomass with recycled ammonia (COBRA) process
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Zhang, Jian, Mohammadi, Maedeh, Gong, Heng, Hodge, David B., Tumuluru, Jayashankar, da Costa Sousa, Leonardo, Dale, Bruce, and Balan, Venkatesh
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- 2025
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25. Magnitude, Extent, and Burden of Substance-use Disorders in West Bengal: Findings from the National Mental Health Survey (NMHS), 2016
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Aniruddha Basu, Pavithra Jayashankar, Aparajita Guin, Sukanto Sarkar, Pradip Kumar Saha, Raghunath Misra, Debasish Sinha, Rajarshi Neogi, Soumyadeep Saha, Vivek Benegal, Girish N Rao, Mathew Varghese, and Gopalkrishna Gururaj
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Psychiatry ,RC435-571 - Abstract
Introduction: Substance-use disorders (SUDs) are a public health problem. The Global Adult Tobacco Survey (GATS) and National Family Health Survey (NFHS) provide evidence of high usage. Hence, the National Mental Health Survey (NMHS) WB data were analyzed to estimate the prevalence, pattern, disability burden, and service utilization of SUD. Methodology: The usual NMHS methodology was used. Four districts were selected, and thereafter, a multistage random sampling was done. The validated Bengali version of the Mini International Neuropsychiatric Interview (MINI) and other instruments like the Fagerstrom Test for Nicotine Dependence (FTND), disability, and health care utilization modules were used. Results: A total of 2,646 eligible members (age >18 years as per 2011 census) were interviewed. It was found that alcohol use as per MINI at least 3 drinks of alcohol within 3 hours on 3 or more occasions was 3.9%, and the weighted prevalence of alcohol-use disorder (AUD) and tobacco-use disorder (TUD) was 3.04% and 14%, respectively. The AUD and TUD prevalence was lower than the national prevalence, yet they were more prevalent in urban areas than in the national trend. The ratio of women to men suffering from AUD in WB (1:5) was one of the highest in the country (all India average 1:18). Also, the treatment gap of 89.2% was more than the national average. Discussion: SUDs are an important public health problem in the state of WB, which requires further research, particularly among women, comorbid psychiatric disorders, and in urban areas.
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- 2024
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26. Variational Quantum Circuits for Multi-Qubit Gate Automata
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Majumder, Arunava, Lewis, Dylan, Jayashankar, Akshaya, Prasannaa, V. S., and Bose, Sougato
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Quantum Physics - Abstract
Implementing quantum operations in the form of natural Hamiltonian dynamics is desirable, since they almost require no external control or feedback. In this work, we propose a NISQ-friendly quantum-classical hybrid approach to designing a time-independent Hamiltonian that generates a given multi-qubit unitary. In particular, we execute a Variational Quantum Algorithm, whose ansatz is carefully chosen to be a sequence of appropriately parametrized unitaries describing at most two-qubit nearest neighbour interactions, dictating the target unitary. Subsequently, we apply our approach to simulate multi-qubit target gates, with and without stochastic noise. We demonstrate that our strategy allows us to implement a Toffoli gate with sufficiently high fidelity, as compared to the other similar techniques. Our approach is an example of the usage of quantum computing for the design of quantum computers., Comment: 6 pages, 6 figures, selected in 4 international conferences
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- 2022
27. Quantum Error Correction: Noise-adapted Techniques and Applications
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Jayashankar, Akshaya and Mandayam, Prabha
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Quantum Physics - Abstract
The quantum computing devices of today have tens to hundreds of qubits that are highly susceptible to noise due to unwanted interactions with their environment. The theory of quantum error correction provides a scheme by which the effects of such noise on quantum states can be mitigated, paving the way for realising robust, scalable quantum computers. In this article we survey the current landscape of quantum error correcting (QEC) codes, focusing on recent theoretical advances in the domain of noise-adapted QEC, and highlighting some key open questions. We also discuss the interesting connections that have emerged between such adaptive QEC techniques and fundamental physics, especially in the areas of many-body physics and cosmology. We conclude with a brief review of the theory of quantum fault tolerance which gives a quantitative estimate of the physical noise threshold below which error-resilient quantum computation is possible., Comment: 26 pages, 7 figures, 1 table. (accepted for publication in Journal of Indian Institute of Science)
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- 2022
28. Piyush Gupta’s Learning Through MCQs in Pediatrics for MD and DM Students (2 Volumes): Piyush Gupta Jaypee Brothers Publishers Pvt Ltd, 2025, ISBN: 9789356967625, Price Rs 3,995/-
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Kaushik, Jayashankar
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- 2024
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29. Stochastic Interventional Vaccine Efficacy and Principal Surrogate Analyses of Antibody Markers as Correlates of Protection against Symptomatic COVID-19 in the COVE mRNA-1273 Trial
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Huang, Ying, Hejazi, Nima S, Blette, Bryan, Carpp, Lindsay N, Benkeser, David, Montefiori, David C, McDermott, Adrian B, Fong, Youyi, Janes, Holly E, Deng, Weiping, Zhou, Honghong, Houchens, Christopher R, Martins, Karen, Jayashankar, Lakshmi, Flach, Britta, Lin, Bob C, O’Connell, Sarah, McDanal, Charlene, Eaton, Amanda, Sarzotti-Kelsoe, Marcella, Lu, Yiwen, Yu, Chenchen, Kenny, Avi, Carone, Marco, Huynh, Chuong, Miller, Jacqueline, Sahly, Hana M El, Baden, Lindsey R, Jackson, Lisa A, Campbell, Thomas B, Clark, Jesse, Andrasik, Michele P, Kublin, James G, Corey, Lawrence, Neuzil, Kathleen M, Pajon, Rolando, Follmann, Dean, Donis, Ruben O, Koup, Richard A, Gilbert, Peter B, Assays, on behalf of the Immune, Moderna, Inc, Efficacy, Coronavirus Vaccine Prevention Network Coronavirus, and Teams, Government CoVPN Biostatistics
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Microbiology ,Biological Sciences ,Infectious Diseases ,Biotechnology ,Vaccine Related ,Emerging Infectious Diseases ,Immunization ,Coronaviruses ,Good Health and Well Being ,Humans ,2019-nCoV Vaccine mRNA-1273 ,Antibodies ,Neutralizing ,Antibodies ,Viral ,COVID-19 ,Immunoglobulin G ,Vaccine Efficacy ,binding antibody assay ,immune correlates of protection ,modified treatment policy ,neutralizing antibody assay ,principal stratification ,principal surrogate ,SARS-CoV-2 ,stochastic intervention ,stochastic interventional vaccine efficacy - Abstract
The COVE trial randomized participants to receive two doses of mRNA-1273 vaccine or placebo on Days 1 and 29 (D1, D29). Anti-SARS-CoV-2 Spike IgG binding antibodies (bAbs), anti-receptor binding domain IgG bAbs, 50% inhibitory dilution neutralizing antibody (nAb) titers, and 80% inhibitory dilution nAb titers were measured at D29 and D57. We assessed these markers as correlates of protection (CoPs) against COVID-19 using stochastic interventional vaccine efficacy (SVE) analysis and principal surrogate (PS) analysis, frameworks not used in our previous COVE immune correlates analyses. By SVE analysis, hypothetical shifts of the D57 Spike IgG distribution from a geometric mean concentration (GMC) of 2737 binding antibody units (BAU)/mL (estimated vaccine efficacy (VE): 92.9% (95% CI: 91.7%, 93.9%)) to 274 BAU/mL or to 27,368 BAU/mL resulted in an overall estimated VE of 84.2% (79.0%, 88.1%) and 97.6% (97.4%, 97.7%), respectively. By binary marker PS analysis of Low and High subgroups (cut-point: 2094 BAU/mL), the ignorance interval (IGI) and estimated uncertainty interval (EUI) for VE were [85%, 90%] and (78%, 93%) for Low compared to [95%, 96%] and (92%, 97%) for High. By continuous marker PS analysis, the IGI and 95% EUI for VE at the 2.5th percentile (519.4 BAU/mL) vs. at the 97.5th percentile (9262.9 BAU/mL) of D57 Spike IgG concentration were [92.6%, 93.4%] and (89.2%, 95.7%) vs. [94.3%, 94.6%] and (89.7%, 97.0%). Results were similar for other D29 and D57 markers. Thus, the SVE and PS analyses additionally support all four markers at both time points as CoPs.
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- 2023
30. Open-heart surgery in preterm infants: A single-center experience
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Danish Memon, Praveen Reddy Bayya, Perraju Bendapudi, Jessin Puliparambil Jayashankar, Brijesh Parayaru Kottayil, Balaji Srimurugan, and Raman Krishna Kumar
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congenital heart surgery ,low resource environments ,preterm ,Medicine ,Pediatrics ,RJ1-570 ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background: Open-heart surgery is challenging in preterm neonates and infants, and its feasibility in low-resource settings has not been defined. We describe our institutional experience with open-heart surgeries performed on consecutive preterm infants. Materials, Methods and Results: This was a single-center retrospective cohort from a tertiary hospital in Southern India and included consecutive preterm neonates (
- Published
- 2024
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31. A case of lepromatous leprosy in a background of chronic hepatitis B infection
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C. A. Jayashankar, Bhanu Prakash, Seetha Venkata Sai Raghava Prashanthi, Nuthan Bhat, Amey Joshi, and Girish Narayanaswamy
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co-infection ,hepatitis b ,lepromatous leprosy ,Medicine - Abstract
Leprosy is a chronic granulomatous infection that primarily affects developing and underdeveloped countries. Co-infection with the hepatitis B virus can complicate its natural course by altering the host immune system response and thereby the disease outcomes. Early detection and treatment of the disease is thus imperative for preventing debilitating deformities. Several studies have shown positive viral markers for human immunodeficiency virus (HIV) and hepatitis B in patients with leprosy. However, in the Indian subcontinent, we have limited evidence highlighting this correlation. We present a case of a 42-year-old male with chronic hepatitis B infection presenting with new-onset lepromatous leprosy. The patient was successfully managed with a multibacillary multidrug regimen. In patients with hepatitis B co-infection, clinicians must be vigilant about the higher risk of complications and poorer patient outcomes. Extensive longitudinal studies assessing the correlation between leprosy and hepatitis B in India can help tailor future guidelines for management.
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- 2024
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32. An in-silico investigation of volatile compounds in Tulsi and Ginger as a potent inhalant for SARS-CoV-2 treatment
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Jayashankar, J., Ningaraju, G. N., Nanjundaswamy, S., Rajabathar, Jothi Ramalingam, Karnan, Muthusamy, Karthik, C. S., and Mallu, P.
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- 2024
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33. Immune correlates analysis of the ENSEMBLE single Ad26.COV2.S dose vaccine efficacy clinical trial.
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Fong, Youyi, McDermott, Adrian, Benkeser, David, Roels, Sanne, Stieh, Daniel, Vandebosch, An, Le Gars, Mathieu, Van Roey, Griet, Houchens, Christopher, Martins, Karen, Jayashankar, Lakshmi, Castellino, Flora, Amoa-Awua, Obrimpong, Basappa, Manjula, Flach, Britta, Lin, Bob, Moore, Christopher, Naisan, Mursal, Naqvi, Muhammed, Narpala, Sandeep, OConnell, Sarah, Mueller, Allen, Serebryannyy, Leo, Castro, Mike, Wang, Jennifer, Petropoulos, Christos, Luedtke, Alex, Hyrien, Ollivier, Lu, Yiwen, Yu, Chenchen, Borate, Bhavesh, van der Laan, Lars, Hejazi, Nima, Kenny, Avi, Carone, Marco, Wolfe, Daniel, Sadoff, Jerald, Gray, Glenda, Grinsztejn, Beatriz, Goepfert, Paul, Little, Susan, Paiva de Sousa, Leonardo, Maboa, Rebone, Randhawa, April, Andrasik, Michele, Hendriks, Jenny, Truyers, Carla, Struyf, Frank, Schuitemaker, Hanneke, Douoguih, Macaya, Kublin, James, Corey, Lawrence, Neuzil, Kathleen, Carpp, Lindsay, Follmann, Dean, Gilbert, Peter, Koup, Richard, and Donis, Ruben
- Subjects
Humans ,Ad26COVS1 ,COVID-19 ,ChAdOx1 nCoV-19 ,2019-nCoV Vaccine mRNA-1273 ,Vaccine Efficacy ,Antibodies ,Neutralizing - Abstract
Measuring immune correlates of disease acquisition and protection in the context of a clinical trial is a prerequisite for improved vaccine design. We analysed binding and neutralizing antibody measurements 4 weeks post vaccination as correlates of risk of moderate to severe-critical COVID-19 through 83 d post vaccination in the phase 3, double-blind placebo-controlled phase of ENSEMBLE, an international randomized efficacy trial of a single dose of Ad26.COV2.S. We also evaluated correlates of protection in the trial cohort. Of the three antibody immune markers we measured, we found most support for 50% inhibitory dilution (ID50) neutralizing antibody titre as a correlate of risk and of protection. The outcome hazard ratio was 0.49 (95% confidence interval 0.29, 0.81; P = 0.006) per 10-fold increase in ID50; vaccine efficacy was 60% (43%, 72%) at non-quantifiable ID50 (
- Published
- 2022
34. Relationships between Alexithymia, Interoception, and Emotional Empathy in Autism Spectrum Disorder
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Butera, Christiana D., Harrison, Laura, Kilroy, Emily, Jayashankar, Aditya, Shipkova, Michelle, Pruyser, Ariel, and Aziz-Zadeh, Lisa
- Abstract
Some studies suggest that individuals with autism spectrum disorder have reduced emotional empathy while others do not. The presence of co-occurring alexithymia in autism spectrum disorder and differences in interoception have been associated with reductions in empathic ability. To fully explore the relationships between interoception, alexithymia, and emotional empathy, we collected self-report and interview data in 35 youth with autism spectrum disorder and 40 typically developing controls (ages 8-17 years). The autism spectrum disorder sample had increased alexithymia and physiological hyperarousal compared to typically developing controls, but there were no group differences in interoception or emotional empathy. Alexithymia severity correlated with higher personal distress in both groups and with lower empathic concern in the autism spectrum disorder group. Within the autism spectrum disorder group, higher incidence of reports of bodily sensation when describing emotional experience correlated with lower personal distress and lower alexithymia. In addition, although empathic concern was negatively correlated with alexithymia in the autism spectrum disorder group, across groups, the alexithymia hypothesis was supported in only the personal distress domain of emotional empathy. These results suggest emotional empathy; personal distress, in particular, is not intrinsically impaired in autism spectrum disorder.
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- 2023
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35. Adaptive quantum codes: constructions, applications and fault tolerance
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Jayashankar, Akshaya
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Quantum Physics ,Condensed Matter - Disordered Systems and Neural Networks - Abstract
A major obstacle towards realizing a practical quantum computer is the noise that arises due to system-environment interactions. While it is very well known that quantum error correction (QEC) provides a way to protect against errors that arise due to the noise affecting the system, a perfect quantum code requires atleast five physical qubits to observe a noticeable improvement over the no-QEC scenario. However, in cases where the noise structure in the system is already known, it might be more useful to consider quantum codes that are adapted to specific noise models. It is already known in the literature that such codes are resource efficient and perform on par with the standard codes. In this spirit, we address the following questions concerning such adaptive quantum codes in this thesis. (a) Construction: Given a noise model, we propose a simple and fast numerical optimization algorithm to search for good quantum codes. (b) Application: As a simple application of noise-adapted codes, we propose an adaptive QEC protocol that allows transmission of quantum information from one site to the other over a 1-d spin chain with high fidelity. (c) Fault-tolerance: Finally, we address the question of whether such noise-adapted QEC protocols can be made fault-tolerant starting with a [[4,1]] code and obtain a rigorous lower bound on threshold., Comment: Thesis (Ph.D.)
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- 2022
36. Design and performance analysis of manchester coder-based body channel communication using FPGA
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Vijayalakshmi S, Paramasivam A, Nagarajan Velmurugan, Kudiyarasan Swamynathan, Kamatchi S, and Hasheetha Jayashankar
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Body channel communication (BCC) ,Consecutive identical digit (CID) ,Error correcting code ,Low-power operation mode ,Pre-amplifier ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
In general, the Body Channel Communication (BCC) is used to transmit human physiological signals over vast distances. Also, the Error-correcting codes can detect and rectify faults in long-range data transmission. Data is encoded in a predetermined manner for secure transmission. In this paper, a Manchester encoding-based high throughput architecture is proposed for a body channel communication system with a low-power operation mode. Further, the Manchester encoder is designed for high throughput performance with a low complexity architecture, and an analog front-end processing circuit which includes two stage pre-amplifiers. Also, the transmission rate on the BCC transceiver side is boosted by the maximum Consecutive Identical Digit (CID), which is limited by Manchester codes. The Manchester code format is generated by encoding the sensed data. Additionally, a full gain buffer is used to reduce data loss and hardware overhead. Results demonstrate that the suggested Manchester encoder is implemented in 90 nano meter (nm) technology, and the 10 Megabits per second (Mbps) data rate is obtained with a configurable operating frequency ranging from 1 to 100 Megahertz (MHz).
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- 2024
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37. A novel method for detecting cardiac arrhythmias in electrocardiogram signals using the ANFIS classifier
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P. Premalatha, N. Shilpa, Sankaran Vijayalakshmi, Alagumariappan Paramasivam, Pavan Sai Kiran Reddy Pittu, S. Kamatchi, Hasheetha Jayashankar, and Kudiyarasan Swamynathan
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Classification ,Classifier optimization ,Electrocardiogram ,Feature extraction ,QT interval ,QT interval instability ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
In general, ventricular repolarization instability with Premature Activations (PA) plays a significant role in the detection of arrhythmia using an electrocardiogram (ECG) signal. However, clinical detection of this instability is challenging. In this work, a unique technique for analyzing QT Interval (QTI) dynamics unreliability and other abnormalities in the ECG signal are utilized to detect ventricular tachycardia based on the identified anomalies. Further, a feature extraction method based on Chopped Displacement Gaussian (CDGa) is adopted and the features are retrieved from the CDGa signal and its size is reduced using Fisher Discrimination Analysis (FDA). Also, the results of the FDA are fed into the Adaptive Neuro-Fuzzy interference (ANFIS) classifier. The performance of the ANFIS classifier is enhanced in this study by integrating the Grasshopper optimization algorithm for optimizing network parameters. As a result, the values in the signals are predicted using an adaptive Least Mean Square (LMS)-based prediction algorithm, which is utilized to forecast the future status of VT-affected patients. Results indicate that the proposed work has an overall accuracy of 96 % which is higher than any other conventional methods. Also, the various additional performance criteria are tested, and it is demonstrated that the CDGa with adaptive LMS outperforms all previous approaches.
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- 2024
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38. Sex-Specific Effect of Ethanol on Colon Content Lipidome in a Mice Model Using Nontargeted LC/MS
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Jayashankar Jayaprakash, Siddabasave Gowda B. Gowda, Pradeep K. Shukla, Divyavani Gowda, Lipsa Rani Nath, Hitoshi Chiba, Radhakrishna Rao, and Shu-Ping Hui
- Subjects
Chemistry ,QD1-999 - Published
- 2024
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39. A clinical study on musculoskeletal changes seen in type 2 diabetes mellitus: A single-center study
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C A Jayashankar, Sharanya Anasosalu Vasu, Harsha Anie Mathew, Venkata Bharat Kumar Pinnelli, A S Shalini, and S P Spandana
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diabetes mellitus ,microvascular complications ,musculoskeletal manifestation ,Internal medicine ,RC31-1245 - Abstract
Background: Type 2 Diabetes mellitus (T2DM) may affect the musculoskeletal (MSK) system in a variety of ways. The impacts can be debilitating enough to impair functional ability and quality of life. MSK complications are the most common endocrine arthropathies which are often under-recognized and poorly treated. This study was done to evaluate the prevalence of MSK complications and its correlation with microvascular complications of T2DM given the paucity of similar studies in India particularly South India. Materials and Methods: A cross-sectional study was conducted on 130 diabetic patients at a tertiary care hospital in Bengaluru. The patient's demographic details, clinical profile including history, general physical examination, systemic examination, and relevant investigations were done to record microvascular complications. A thorough MSK system examination along with imaging of bones and joints was also performed. Results: Out of 130 diabetic patients, 21 patients (16.2%) had MSK complications of which 47.6% (n = 10) of them had carpal tunnel syndrome and 42.8% (n = 9) had frozen shoulder and 9.5% (n = 2) had diabetic amyotrophy. It was also noted that patients who were on oral hypoglycemic agents alone were more likely to develop MSK complications (57.14%) than patients solely on insulin (14.2%). Poor glycemic control, existing microvascular complications, and low high-density lipoprotein were found to be associated with increased risk of MSK complications. Conclusion: The prevalence of MSK complications in T2DM patients is quite significant and is also associated with microvascular complications. Improved glycemic control in T2DM was found to reduce the burden of such complications. Early identification of MSK complications can improve the quality of life in diabetic patients and hence demands proper screening and follow-up.
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- 2024
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40. Genomic characterization and distribution of XDR Klebsiella pneumoniae ST15 carrying blaOXA-181 on ColKP3 plasmid from an ICH patient in eastern India: A global comparative analysis
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Sahoo, Swayamprabha, Routray, Sweta Padma, Mohanty, Jatindra Nath, Pattnaik, Animesh, Nayak, Debasish Swapnesh Kumar, Shah, Sejal, Das, Jayashankar, Subudhi, Enketeswara, and Swarnkar, Tripti
- Published
- 2024
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41. Rv0547c, a functional oxidoreductase, supports Mycobacterium tuberculosis persistence by reprogramming host mitochondrial fatty acid metabolism
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Medikonda, Jayashankar, Wankar, Nandini, Asalla, Suman, Raja, Sufi O., Yandrapally, Sriram, Jindal, Haneesh, Agarwal, Anushka, Pant, Chitrakshi, Kalivendi, Shasi V., Kumar Dubey, Harish, Mohareer, Krishnaveni, Gulyani, Akash, and Banerjee, Sharmistha
- Published
- 2024
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42. Epidemiological analysis of leptospirosis, dengue, and Co-infection rates among febrile illness cases in Dakshina Kannada, Karnataka
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Veena, R.K., Vinod Kumar, K., Swathi, M., Bokade, P.P., Pal, A., SowjanyaKumari, S., Arun, Y.P., Devaraj, S., Jagadeesha, K., Padma, M.R., Jayashankar, M., ChethanKumar, H.B., Shome, B.R., Gulati, B.R., and Balamurugan, V.
- Published
- 2024
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43. Disgust Processing and Potential Relationships with Behaviors in Autism
- Author
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Jayashankar, Aditya and Aziz-Zadeh, Lisa
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- 2023
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44. Mendelian imputation of parental genotypes improves estimates of direct genetic effects
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Young, Alexander I, Nehzati, Seyed Moeen, Benonisdottir, Stefania, Okbay, Aysu, Jayashankar, Hariharan, Lee, Chanwook, Cesarini, David, Benjamin, Daniel J, Turley, Patrick, and Kong, Augustine
- Subjects
Biological Sciences ,Genetics ,Human Genome ,Aetiology ,2.1 Biological and endogenous factors ,Generic health relevance ,Genome-Wide Association Study ,Genotype ,Humans ,Parents ,Polymorphism ,Single Nucleotide ,Software ,Medical and Health Sciences ,Developmental Biology ,Agricultural biotechnology ,Bioinformatics and computational biology - Abstract
Effects estimated by genome-wide association studies (GWASs) include effects of alleles in an individual on that individual (direct genetic effects), indirect genetic effects (for example, effects of alleles in parents on offspring through the environment) and bias from confounding. Within-family genetic variation is random, enabling unbiased estimation of direct genetic effects when parents are genotyped. However, parental genotypes are often missing. We introduce a method that imputes missing parental genotypes and estimates direct genetic effects. Our method, implemented in the software package snipar (single-nucleotide imputation of parents), gives more precise estimates of direct genetic effects than existing approaches. Using 39,614 individuals from the UK Biobank with at least one genotyped sibling/parent, we estimate the correlation between direct genetic effects and effects from standard GWASs for nine phenotypes, including educational attainment (r = 0.739, standard error (s.e.) = 0.086) and cognitive ability (r = 0.490, s.e. = 0.086). Our results demonstrate substantial confounding bias in standard GWASs for some phenotypes.
- Published
- 2022
45. Polygenic prediction of educational attainment within and between families from genome-wide association analyses in 3 million individuals
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Okbay, Aysu, Wu, Yeda, Wang, Nancy, Jayashankar, Hariharan, Bennett, Michael, Nehzati, Seyed Moeen, Sidorenko, Julia, Kweon, Hyeokmoon, Goldman, Grant, Gjorgjieva, Tamara, Jiang, Yunxuan, Hicks, Barry, Tian, Chao, Hinds, David A, Ahlskog, Rafael, Magnusson, Patrik KE, Oskarsson, Sven, Hayward, Caroline, Campbell, Archie, Porteous, David J, Freese, Jeremy, Herd, Pamela, Watson, Chelsea, Jala, Jonathan, Conley, Dalton, Koellinger, Philipp D, Johannesson, Magnus, Laibson, David, Meyer, Michelle N, Lee, James J, Kong, Augustine, Yengo, Loic, Cesarini, David, Turley, Patrick, Visscher, Peter M, Beauchamp, Jonathan P, Benjamin, Daniel J, and Young, Alexander I
- Subjects
Human Genome ,Genetics ,Pediatric ,Aetiology ,2.1 Biological and endogenous factors ,Genome-Wide Association Study ,Humans ,Multifactorial Inheritance ,Polymorphism ,Single Nucleotide ,23andMe Research Team ,Social Science Genetic Association Consortium ,Biological Sciences ,Medical and Health Sciences ,Developmental Biology - Abstract
We conduct a genome-wide association study (GWAS) of educational attainment (EA) in a sample of ~3 million individuals and identify 3,952 approximately uncorrelated genome-wide-significant single-nucleotide polymorphisms (SNPs). A genome-wide polygenic predictor, or polygenic index (PGI), explains 12-16% of EA variance and contributes to risk prediction for ten diseases. Direct effects (i.e., controlling for parental PGIs) explain roughly half the PGI's magnitude of association with EA and other phenotypes. The correlation between mate-pair PGIs is far too large to be consistent with phenotypic assortment alone, implying additional assortment on PGI-associated factors. In an additional GWAS of dominance deviations from the additive model, we identify no genome-wide-significant SNPs, and a separate X-chromosome additive GWAS identifies 57.
- Published
- 2022
46. Achieving fault tolerance against amplitude-damping noise
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Jayashankar, Akshaya, Long, My Duy Hoang, Ng, Hui Khoon, and Mandayam, Prabha
- Subjects
Quantum Physics - Abstract
With the intense interest in small, noisy quantum computing devices comes the push for larger, more accurate -- and hence more useful -- quantum computers. While fully fault-tolerant quantum computers are, in principle, capable of achieving arbitrarily accurate calculations using devices subjected to general noise, they require immense resources far beyond our current reach. An intermediate step would be to construct quantum computers of limited accuracy enhanced by lower-level, and hence lower-cost, noise-removal techniques. This is the motivation for our work, which looks into fault-tolerant encoded quantum computation targeted at the dominant noise afflicting the quantum device. Specifically, we develop a protocol for fault-tolerant encoded quantum computing components in the presence of amplitude-damping noise, using a 4-qubit code and a recovery procedure tailored to such noise. We describe a universal set of fault-tolerant encoded gadgets and compute the pseudothreshold for the noise, below which our scheme leads to more accurate computation. Our work demonstrates the possibility of applying the ideas of quantum fault tolerance to targeted noise models, generalizing the recent pursuit of biased-noise fault tolerance beyond the usual Pauli noise models. We also illustrate how certain aspects of the standard fault tolerance intuition, largely acquired through Pauli-noise considerations, can fail in the face of more general noise., Comment: 14 pages (main text) + 11 pages (supplemental material), 13 figures
- Published
- 2021
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47. Neuroprotective Potential of Total Extract of Ulva Lactuca: An In vitro study
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Kumari, K Naveen, Jeyabalan, Srikanth, Rajangam, Jayaraman, Gopinathan, N., Ramakrishnan, S.R., and Reddy, V. Jayashankar
- Published
- 2023
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48. MS2Lipid: A Lipid Subclass Prediction Program Using Machine Learning and Curated Tandem Mass Spectral Data
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Nami Sakamoto, Takaki Oka, Yuki Matsuzawa, Kozo Nishida, Jayashankar Jayaprakash, Aya Hori, Makoto Arita, and Hiroshi Tsugawa
- Subjects
untargeted lipidomics ,tandem mass spectrum ,machine learning ,lipid class prediction ,microbiota-dependent lipids ,human fecal samples ,Microbiology ,QR1-502 - Abstract
Background: Untargeted lipidomics using collision-induced dissociation-based tandem mass spectrometry (CID-MS/MS) is essential for biological and clinical applications. However, annotation confidence still relies on manual curation by analytical chemists, despite the development of various software tools for automatic spectral processing based on rule-based fragment annotations. Methods: In this study, we present a novel machine learning model, MS2Lipid, for the prediction of known lipid subclasses from MS/MS queries, providing an orthogonal approach to existing lipidomics software programs in determining the lipid subclass of ion features. We designed a new descriptor, MCH (mode of carbon and hydrogen), to increase the specificity of lipid subclass prediction in nominal mass resolution MS data. Results: The model, trained with 6760 and 6862 manually curated MS/MS spectra for the positive and negative ion modes, respectively, classified queries into one or several of 97 lipid subclasses, achieving an accuracy of 97.4% in the test set. The program was further validated using various datasets from different instruments and curators, with the average accuracy exceeding 87.2%. Using an integrated approach with molecular spectral networking, we demonstrated the utility of MS2Lipid by annotating microbiota-derived esterified bile acids, whose abundance was significantly increased in fecal samples of obese patients in a human cohort study. This suggests that the machine learning model provides an independent criterion for lipid subclass classification, enhancing the annotation of lipid metabolites within known lipid classes. Conclusions: MS2Lipid is a highly accurate machine learning model that enhances lipid subclass annotation from MS/MS data and provides an independent criterion.
- Published
- 2024
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49. Prevalence and pattern of mental disorders in the state of West Bengal: Findings from the National Mental Health Survey of India 2016
- Author
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Sukanto Sarkar, Aniruddha Basu, Sucharita Mandal, Pavithra Jayashankar, Pradeep K. Saha, Raghunath Misra, Debasish Sinha, Rajarshi Neogi, Soumyadeep Saha, Vivek Benegal, Girish N. Rao, Mathew Varghese, and Gopalkrishna Gururaj
- Subjects
india ,mental illness ,national mental health survey ,prevalence ,west bengal ,Psychiatry ,RC435-571 - Abstract
Background: West Bengal, situated in eastern India, comprising 19 districts as of 2016 and consisting of 9.13 crore population, had been one of the participating states in the National Mental Health Survey, 2015–16. Aim: To estimate the prevalence and pattern of mental disorders in a representative population in West Bengal. Materials and Methods: Based upon a multi-stage stratified random cluster sampling with probability proportionate to each stage, 2646 eligible individuals were interviewed. Standard validated instruments in Bengali like socio-demographic profiles and Mini International Neuropsychiatric Interview (MINI) version 6 were used by trained data collectors with quality monitoring as per a standardized protocol. Results: The current prevalence of mental illness in the state of West Bengal is 13.07% (12.9–13.24 95% CI), which is more than the current national average of 10.56% (10.51–10.61 95% CI). The prevalence of severe mental illness of 2.32% and suicide risk of 1.75% (1.68–1.81 95% CI) is higher than the national average. The common mental illness prevalence is 11.29 (11.13–11.45 95% CI), which is similar to the national weighted average. In West Bengal, severe mental illness is more concentrated in the rural areas in contrast to the national trend. Also, the prevalence of alcohol use disorder is 3.04 (2.96–3.13 95% CI) and epilepsy is 0.03 (0.27–0.29 95% CI), which is less than the national average. Conclusion: The prevalence of mental disorders in the state of West Bengal is higher than the national average, and for severe mental illness, the prevalence is the highest as compared to the national average.
- Published
- 2023
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- View/download PDF
50. Metabolic Derangements with Anticonvulsants in Children with Generalised Tonic-clonic Epilepsy: A Cross-sectional Study
- Author
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Jyoti Sharma, Savita Verma, Himani Deswal, and Jayashankar Kaushik
- Subjects
child ,combination drug therapy ,metabolic syndrome ,Medicine - Abstract
Introduction: Epilepsy is one of the most prevalent noncommunicable neurologic conditions, accounting for significant disability and mortality. The effects of Antiepileptic Drugs (AEDs) on total cholesterol, triglycerides, High-Density Lipoprotein (HDL) cholesterol, low-density lipoprotein cholesterol, and apolipoprotein levels have been demonstrated in many studies, mainly conducted with adults. However, there have been very few studies in children. Derangement of lipid profile and other metabolic abnormalities could lead to the development of metabolic syndrome in children. The adverse metabolic effects of anti-epileptics are underestimated, as only a few studies have been done in this area, which is a legitimate concern. Aim: To assess the impact of AEDs on metabolic parameters in children with epilepsy. Materials and Methods: This was a descriptive, crosssectional study conducted in the Department of Paediatrics and Pharmacology at Pt. BD Sharma PGIMS, Rohtak, Haryana, India. The study included 100 children with epilepsy from May 2022 to October 2022. A predefined case record form, including demographic and clinical characteristics, was filled for each participant. The parameters recorded were age, gender, outpatient number, type of epilepsy, history of duration of epilepsy, current AED history, and seizure frequency over the preceding six months, as per the case record form. Guidelines from the International Diabetes Federation were used for diagnosing metabolic syndrome in children. The data was entered into Microsoft excel and presented using descriptive statistics. The chi-square test was used to differentiate between categorical variables. Results: The mean age of the study participants was 10.2±2.97 years. There were more males (62%) than females (38%). A 48% of the patients received monotherapy, while 52% received polytherapy. A total of 24% of the patients had derangement in lipid profile (increased triglycerides and decreased HDL), with 14% of patients on monotherapy and 10% on polytherapy. The difference in metabolic derangements between monotherapy and polytherapy was not statistically significant (p=0.25). Out of 100 participants, 3% fulfilled the criteria for metabolic syndrome, with a predominance in males. Conclusion: Metabolic derangements are known with 1st generation AEDs, but 2nd generation AEDs can also lead to significant metabolic abnormalities.
- Published
- 2023
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- View/download PDF
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