38,105 results on '"Jie, Li"'
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2. A multi-targeting immunotherapy ameliorates multiple facets of Alzheimer’s disease in 3xTg mice
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Xuejian Feng, Yunyu Hou, Jiaxin Liu, Fei Yan, Mingrui Dai, Mo Chen, Jianan Wang, Jie Li, Zhenjiang Liu, Dong Sun, Yong Zhang, Xianghui Yu, Wei Kong, and Hui Wu
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Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Alzheimer’s disease (AD) is an intricate disorder involving amyloid deposits, neurofibrillary tangles, and chronic neuroinflammation. Though current Aβ-directed immunotherapies effectively eliminate amyloid plaques, their limited clinical benefits and notable safety concerns arise from overlooking two other neglected neurodegenerative features. Compelling evidence highlights synergistic cooperation between Aβ and tau, underscoring the imperative need to develop combinational therapies to target the diverse pathologies of AD. In this study, we present a dual AD vaccine combining Aβ and pTau vaccines, eliciting robust and enduring antibody responses against pathological Aβ and pTau in 3xTg transgenic mice. It significantly eradicated Aβ plaques and pTau tangles, suppressed neuroinflammatory factors, and markedly enhancing cognitive abilities in 3xTg mice. Mechanistically, peripheral antibodies penetrated the brain, recognizing and inhibiting Aβ and pTau aggregation, thereby reducing their cytotoxicity. In summary, this innovative multi-targeting immunotherapy remarkably ameliorates diverse AD pathologies, demonstrating maximum benefits in slowing the clinical progression of AD.
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- 2024
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3. Multi-channel electron transfer induced by polyvanadate in metal-organic framework for boosted peroxymonosulfate activation
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Ming-Yan Lan, Yu-Hang Li, Chong-Chen Wang, Xin-Jie Li, Jiazhen Cao, Linghui Meng, Shuai Gao, Yuhui Ma, Haodong Ji, and Mingyang Xing
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Science - Abstract
Abstract Catalytic peroxymonosulfate (PMS) activation processes don’t solely rely on electron transfer from dominant metal centers due to the complicated composition and interface environment of catalysts. Herein the synthesis of a cobalt based metal-organic framework containing polyvanadate [V4O12]4− cluster, Co2(V4O12)(bpy)2 (bpy = 4,4’-bipyridine), is presented. The catalyst demonstrates superior degradation activity toward various micropollutants, with higher highest occupied molecular orbital (HOMO), via nonradical attack. The X-ray absorption spectroscopy and density functional theory (DFT) calculations demonstrate that Co sites act as both PMS trapper and electron donor. In situ spectral characterizations and DFT calculations reveal that the terminal oxygen atoms in the [V4O12]4− electron sponge could interact with the terminal hydrogen atoms in PMS to form hydrogen bonds, promoting the generation of SO5* intermediate via both dynamic pull and direct electron transfer process. Further, Co2(V4O12)(bpy)2 exhibits long-term water purification ability, up to 40 h, towards actual wastewater discharged from an ofloxacin production factory. This work not only presents an efficient catalyst with an electron sponge for water environmental remediation via nonradical pathway, but also provides fundamental insights into the Fenton-like reaction mechanism.
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- 2024
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4. Tumor targeting peptide TMTP1 modified Antigen capture Nano-vaccine combined with chemotherapy and PD-L1 blockade effectively inhibits growth of ovarian cancer
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Ying Zhou, Rui Wei, Ling Wang, Jie Li, Wei Wang, Guiying Jiang, Songwei Tan, Fei Li, Xueqian Wang, Xiangyi Ma, and Ling Xi
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Cancer vaccine ,Nano-vaccine ,TMTP1 ,Antigen capture ,Combination therapy ,Ovarian cancer ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract The mortality of ovarian cancer (OC) has long been the highest among gynecological malignancies. Although OC is considered to be an immunogenic tumor, the effect of immunotherapy is not satisfactory. The immunosuppressive microenvironment is one reason for this, and the absence of recognized effective antigens for vaccines is another. Chemotherapy, as one of the most commonly used treatment for OC, can produce chemotherapy-associated antigens (CAAs) during treatment and show the effect of in situ vaccine. Herein, we designed an antigen capture nano-vaccine NP-TP1@M-M with tumor targeting peptide TMTP1 and dendritic cell (DC) receptor mannose assembled on the surface and adjuvant monophosphoryl lipid A (MPLA) encapsulated in the core of poly (D, L-lactide-co-glycolide) (PLGA) nanoparticles. PLGA itself possessed the ability of antigen capture. TMTP1 was a tumor-homing peptide screened by our research team, which held extensive and excellent tumor targeting ability. After these modifications, NP-TP1@M-M could capture and enrich more tumor-specific antigens after chemotherapy, stimulate DC maturation, activate the adaptive immunity and combined with immune checkpoint blockade to maximize the release of the body’s immune potential, providing an eutherapeutic strategy for the treatment of OC.
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- 2024
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5. Revolutionizing early Alzheimer's disease and mild cognitive impairment diagnosis: a deep learning MRI meta-analysis
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Li-xue Wang, Yi-zhe Wang, Chen-guang Han, Lei Zhao, Li He, and Jie Li
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Alzheimer Disease ,Cognitive Dysfunction ,Magnetic Resonance Imaging ,Deep Learning ,Meta-Analysis ,Doença de Alzheimer ,Disfunção Cognitiva ,Imageamento por Ressonância Magnética ,Aprendizado Profundo ,Metanálise ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Background The early diagnosis of Alzheimer's disease (AD) and mild cognitive impairment (MCI) remains a significant challenge in neurology, with conventional methods often limited by subjectivity and variability in interpretation. Integrating deep learning with artificial intelligence (AI) in magnetic resonance imaging (MRI) analysis emerges as a transformative approach, offering the potential for unbiased, highly accurate diagnostic insights.
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- 2024
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6. Phosphorus fertilization enhanced overwintering, root system and forage yield of late-seeded alfalfa in sodic soils
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Yuntao Wang, Jihong Xie, Fan Fan, Zhen Sun, Feng Yuan, Qiqi Wang, Linqing Yu, Yaling Liu, Jie Li, and Lele Cui
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Medicago sativa L. ,Sowing date ,Phosphorus fertilization ,Overwintering rate ,Root traits ,Forage production ,Medicine ,Science - Abstract
Abstract Sowing date and soil fertility are very important factors in the overwintering and production performance of alfalfa (Medicago sativa L.), yet there’s a knowledge gap in knowledge on how late-seeded alfalfa responds to phosphorus (P) fertilization. A field study was conducted in Inner Mongolia from 2020 to 2022 using a split-plot design. The main plots consisted of five sowing dates (31 July, 8, 16, and 24 August, and 1 September), while the subplots involved five P application rates (0, 40, 70, 100, and 130 kg P2O5 ha−1). Throughout the growing seasons, the overwintering rate, root traits, forage yield, and yield components were measured. The results revealed a consistent decrease in overwintering ability and productivity with the delayed sowing. This reduction in overwintering rate was mainly due to diminished root traits, while the decrease in forage yield was largely associated with a reduction in plants per square meter. However, P fertilizer application to late-seeded alfalfa demonstrated potential in enhancing the diameter of both the crown and taproot, thus strengthening the root system and improving the overwintering rate, the rate of increase ranges from 11.6 to 49%. This adjustment could also improve the shoots per square meter and mass per shoot, increasing by 9.4–31.3% and 15.0–27.1% respectively in 2 years, which can offset the decline in forage yield caused by late sowing and might even increase the forage yield. Regression and path analysis indicated that alfalfa forage yield is primarily affected by mass per shoot rather than shoots per square meter. This study recommended that the sowing of alfalfa in similar regions of Inner Mongolia should not be later than mid-August. Moreover, applying P fertilizer (P2O5) at 70.6–85.9 kg ha−1 can enhance the forage yield and persistence of late-seeded alfalfa. Therefore, appropriate late sowing combined with the application of P fertilizer can be used as an efficient cultivation strategy for alfalfa cultivation after a short-season crop harvest in arid and cold regions.
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- 2024
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7. A study on factors influencing delayed sputum conversion in newly diagnosed pulmonary tuberculosis based on bacteriology and genomics
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Mengdi Pang, Xiaowei Dai, Nenhan Wang, Junli Yi, Shanhua Sun, Honghao Miao, Jie Zhang, Hongtai Zhang, Jie Li, Beichuan Ding, Xinyu Yang, and Chuanyou Li
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Mycobacterium tuberculosis ,Delayed sputum conversion ,Anti-tuberculosis treatment ,Whole genome sequencing ,Drug-resistance ,Medicine ,Science - Abstract
Abstract Conversion of sputum from positive to negative is one of the indicators to evaluate the efficacy of anti-tuberculosis treatment (ATT). We investigate the factors associated with delayed sputum conversion after 2 or 5 months of ATT from the perspectives of bacteriology and genomics. A retrospective study of sputum conversion in sputum positive 1782 pulmonary tuberculosis (PTB) was conducted from 2021 to 2022 in Beijing, China. We also designed a case-matched study including 24 pairs of delayed-sputum-conversion patients (DSCPs) and timely-sputum-conversion patients (TSCPs), and collect clinical isolates from DSCPs before and after ATT and initial isolates of TSCPs who successfully achieved sputum conversion to negative after 2 months of ATT. A total of 75 strains were conducted drug sensitivity testing (DST) of 13 anti-TB drugs and whole-genome sequencing (WGS) to analyze the risk factors of delayed conversion and the dynamics changes of drug resistance and genomics of Mycobacterium tuberculosis (MTB) during ATT. We found TSCPs have better treatment outcomes and whose initial isolates show lower levels of drug resistance. Clinical isolates of DSCPs showed dynamically changing of resistance phenotypes and intra-host heterogeneity. Single nucleotide polymorphism (SNP) profiles showed large differences between groups. The study provided insight into the bacteriological and genomic variation of delayed sputum conversion. It would be helpful for early indication of sputum conversion and guidance on ATT.
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- 2024
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8. Gasdermin-E-mediated pyroptosis drives immune checkpoint inhibitor-associated myocarditis via cGAS-STING activation
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Si-Jia Sun, Xiao-Dong Jiao, Zhi-Gang Chen, Qi Cao, Jia-Hui Zhu, Qi-Rui Shen, Yi Liu, Zhen Zhang, Fang-Fang Xu, Yu Shi, Jie Tong, Shen-Xi Ouyang, Jiang-Tao Fu, Yi Zhao, Jun Ren, Dong-Jie Li, Fu-Ming Shen, and Pei Wang
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Science - Abstract
Abstract Immune checkpoint inhibitor (ICI)-induced myocarditis involves intensive immune/inflammation activation; however, its molecular basis is unclear. Here, we show that gasdermin-E (GSDME), a gasdermin family member, drives ICI-induced myocarditis. Pyroptosis mediated by GSDME, but not the canonical GSDMD, is activated in myocardial tissue of mice and cancer patients with ICI-induced myocarditis. Deficiency of GSDME in male mice alleviates ICI-induced cardiac infiltration of T cells, macrophages, and monocytes, as well as mitochondrial damage and inflammation. Restoration of GSDME expression specifically in cardiomyocytes, rather than myeloid cells, in GSDME-deficient mice reproduces ICI-induced myocarditis. Mechanistically, quantitative proteomics reveal that GSDME-dependent pyroptosis promotes cell death and mitochondrial DNA release, which in turn activates cGAS-STING signaling, triggering a robust interferon response and myocardial immune/inflammation activation. Pharmacological blockade of GSDME attenuates ICI-induced myocarditis and improves long-term survival in mice. Our findings may advance the understanding of ICI-induced myocarditis and suggest that targeting the GSDME-cGAS-STING-interferon axis may help prevent and manage ICI-associated myocarditis.
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- 2024
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9. A 4D spontaneous micro‐expression database: Establishment and evaluation
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Fengping Wang, Jie Li, Chun Qi, Lin Wang, and Pan Wang
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computer vision ,emotion recognition ,face recognition ,image processing ,optical images ,Photography ,TR1-1050 ,Computer software ,QA76.75-76.765 - Abstract
Abstract Micro‐expressions are spontaneous and unconscious facial movements that reveal individuals’ genuine inner emotions. They hold significant potential in various psychological testing fields. As the face is a 3D deformation object, the emergence of facial expression leads to spatial deformation of the face. However, existing databases primarily offer 2D video sequences, limiting descriptions of 3D spatial information related to micro‐expressions. Here, a new micro‐expression database is proposed, which contains 2D image sequences and corresponding 3D point cloud sequences. These samples were classified using both an objective method based on the facial action coding system and a non‐objective emotion classification method that considers video contents and participants’ self‐reports. A variety of feature extraction techniques are applied to 2D data, including traditional algorithms and deep learning methods. Additionally, a novel local curvature‐based algorithm is developed to extract 3D spatio‐temporal deformation features from the 3D data. The authors evaluated the classification accuracies of these two features individually and their fusion results under leave‐one‐subject‐out (LOSO) and tenfold cross‐validation. The results demonstrate that fusing 3D features with 2D features results in improved recognition performance compared to using 2D features alone.
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- 2024
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10. Cloud computing load prediction method based on CNN-BiLSTM model under low-carbon background
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HaoFang Zhang, Jie Li, and HaoRan Yang
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Low carbon ,CNN ,BiLSTM ,Loud computing load forecasting ,Arbon emissions ,Medicine ,Science - Abstract
Abstract With the establishment of the "double carbon” goal, various industries are actively exploring ways to reduce carbon emissions. Cloud data centers, represented by cloud computing, often have the problem of mismatch between load requests and resource supply, resulting in excessive carbon emissions. Based on this, this paper proposes a complete method for cloud computing carbon emission prediction. Firstly, the convolutional neural network and bidirectional long-term and short-term memory neural network (CNN-BiLSTM) combined model are used to predict the cloud computing load. The real-time prediction power is obtained by real-time prediction load of cloud computing, and then the carbon emission prediction is obtained by power calculation. Develop a dynamic server carbon emission prediction model, so that the server carbon emission can change with the change of CPU utilization, so as to achieve the purpose of low carbon emission reduction. In this paper, Google cluster data is used to predict the load. The experimental results show that the CNN-BiLSTM combined model has good prediction effect. Compared with the multi-layer feed forward neural network model (BP), long short-term memory network model (LSTM ), bidirectional long short-term memory network model (BiLSTM), modal decomposition and convolution long time series neural network model (CEEMDAN-ConvLSTM), the MSE index decreased by 52 $$\%$$ % , 50 $$\%$$ % , 34 $$\%$$ % and 45 $$\%$$ % respectively.
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- 2024
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11. Neuroimmune modulation in liver pathophysiology
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Ju Zou, Jie Li, Xiaoxu Wang, Daolin Tang, and Ruochan Chen
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Liver disease ,Autonomic nervous system ,Sympathetic nervous system ,Parasympathetic nervous system ,Neuroimmune system ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract The liver, the largest organ in the human body, plays a multifaceted role in digestion, coagulation, synthesis, metabolism, detoxification, and immune defense. Changes in liver function often coincide with disruptions in both the central and peripheral nervous systems. The intricate interplay between the nervous and immune systems is vital for maintaining tissue balance and combating diseases. Signaling molecules and pathways, including cytokines, inflammatory mediators, neuropeptides, neurotransmitters, chemoreceptors, and neural pathways, facilitate this complex communication. They establish feedback loops among diverse immune cell populations and the central, peripheral, sympathetic, parasympathetic, and enteric nervous systems within the liver. In this concise review, we provide an overview of the structural and compositional aspects of the hepatic neural and immune systems. We further explore the molecular mechanisms and pathways that govern neuroimmune communication, highlighting their significance in liver pathology. Finally, we summarize the current clinical implications of therapeutic approaches targeting neuroimmune interactions and present prospects for future research in this area.
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- 2024
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12. Neuronal double-stranded DNA accumulation induced by DNase II deficiency drives tau phosphorylation and neurodegeneration
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Ling-Jie Li, Xiao-Ying Sun, Ya-Ru Huang, Shuai Lu, Yu-Ming Xu, Jing Yang, Xi-Xiu Xie, Jie Zhu, Xiao-Yun Niu, Dan Wang, Shi-Yu Liang, Xiao-Yu Du, Sheng-Jie Hou, Xiao-Lin Yu, and Rui-Tian Liu
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DNase II ,Alzheimer’s disease ,Double-stranded DNA ,Tau phosphorylation ,Tauopathy ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Deoxyribonuclease 2 (DNase II) plays a key role in clearing cytoplasmic double-stranded DNA (dsDNA). Deficiency of DNase II leads to DNA accumulation in the cytoplasm. Persistent dsDNA in neurons is an early pathological hallmark of senescence and neurodegenerative diseases including Alzheimer’s disease (AD). However, it is not clear how DNase II and neuronal cytoplasmic dsDNA influence neuropathogenesis. Tau hyperphosphorylation is a key factor for the pathogenesis of AD. The effect of DNase II and neuronal cytoplasmic dsDNA on neuronal tau hyperphosphorylation remains unclarified. Methods The levels of neuronal DNase II and dsDNA in WT and Tau-P301S mice of different ages were measured by immunohistochemistry and immunolabeling, and the levels of DNase II in the plasma of AD patients were measured by ELISA. To investigate the impact of DNase II on tauopathy, the levels of phosphorylated tau, phosphokinase, phosphatase, synaptic proteins, gliosis and proinflammatory cytokines in the brains of neuronal DNase II-deficient WT mice, neuronal DNase II-deficient Tau-P301S mice and neuronal DNase II-overexpressing Tau-P301S mice were evaluated by immunolabeling, immunoblotting or ELISA. Cognitive performance was determined using the Morris water maze test, Y-maze test, novel object recognition test and open field test. Results The levels of DNase II were significantly decreased in the brains and the plasma of AD patients. DNase II also decreased age-dependently in the neurons of WT and Tau-P301S mice, along with increased dsDNA accumulation in the cytoplasm. The DNA accumulation induced by neuronal DNase II deficiency drove tau phosphorylation by upregulating cyclin-dependent-like kinase-5 (CDK5) and calcium/calmodulin activated protein kinase II (CaMKII) and downregulating phosphatase protein phosphatase 2A (PP2A). Moreover, DNase II knockdown induced and significantly exacerbated neuron loss, neuroinflammation and cognitive deficits in WT and Tau-P301S mice, respectively, while overexpression of neuronal DNase II exhibited therapeutic benefits. Conclusions DNase II deficiency and cytoplasmic dsDNA accumulation can initiate tau phosphorylation, suggesting DNase II as a potential therapeutic target for tau-associated disorders. Graphical Abstract Scheme depicting the possible mechanism by which DNase II deficiency induces cognitive impairment in mice. DNase II deficiency induces tau phosphorylation by regulating kinases CDK5 and CaMKII as well as phosphatase PP2A through accumulation of undigested damaged DNA in the cytoplasm of neurons. Then phosphorylated tau induces synaptic loss, neuroinflammation, and neuronal apoptosis, eventually rendering cognitive impairment in mice.
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- 2024
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13. Theory and test of underground explosions: Coupling rule between cratering and ground shock
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Wei Guo, Jie Li, Benjun Shi, Tianhan Xu, Xiaohui Xu, Gan Li, and Jie Shi
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Underground explosion ,Ground shock coupling ,Coupling coefficient ,Equivalent closed explosion ,Experimental study ,Engineering geology. Rock mechanics. Soil mechanics. Underground construction ,TA703-712 - Abstract
Calculating the parameters of the ground shock induced by an underground explosion is a complex energy coupling problem. It is difficult to establish a unified ground shock coupling law from limited test data. This paper summarizes the research results obtained at home and abroad and systematically analyzes the coupling mechanism of craters formed by an underground explosion and the ground shock. The differences between the concepts of “closed-explosion critical depth” and “equivalent closed-explosion critical depth” are clearly explained. The spreading of the ground shock energy is attributed to the explosive expansion of the air cavity, revealing a linear relationship between the volume of the cavity region (or the volume of the crack region) and the ground shock energy associated with the underground explosion. The proportionality factor is related to the mechanical properties of the medium and is independent of the magnitude of the explosion equivalent. Based on this, a theoretical calculation formula and conversion method for the ground shock coupling coefficient were established. Explosion tests were conducted in clay and Plexiglass under varying burial depths. The test results were consistent with the theoretically calculated results. Our study provides a theoretical basis for the design of explosion-resistant structures in underground engineering.
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- 2024
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14. The Resurgence of European Nationalism: a Post-Functionalist Perspective
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Jie Li and Lei Chen
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european nationalism ,post-functionalism ,european integration ,Political institutions and public administration (General) ,JF20-2112 - Abstract
The resurgence of European nationalism has become an important phenomenon in the current European political landscape. The structural tension between national nationalism and regional integration is the main contradiction in the development of European countries. This paper analyzes the manifestation and path of the resurgence of European nationalism with the help of post-functionalist theoretical tools, pays attention to the challenges of nationalism to the existing jurisdiction of European integration, better grasp the current European situation, stimulates European supranational institutions to reflect deeply on nationalism, and promotes European integration to a more comprehensive and inclusive direction.
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- 2024
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15. Dual-scale shifted window attention network for medical image segmentation
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De-wei Han, Xiao-lei Yin, Jian Xu, Kang Li, Jun-jie Li, Lu Wang, and Zhao-yuan Ma
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Swin Transformer ,Dual-scale shifted window attention ,Medical image segmentation ,Medicine ,Science - Abstract
Abstract Swin Transformer is an important work among all the attempts to reduce the computational complexity of Transformers while maintaining its excellent performance in computer vision. Window-based patch self-attention can use the local connectivity of the image features, and the shifted window-based patch self-attention enables the communication of information between different patches in the entire image scope. Through in-depth research on the effects of different sizes of shifted windows on the patch information communication efficiency, this article proposes a Dual-Scale Transformer with double-sized shifted window attention method. The proposed method surpasses CNN-based methods such as U-Net, AttenU-Net, ResU-Net, CE-Net by a considerable margin (Approximately 3% $$\sim$$ ∼ 6% increase), and outperforms the Transformer based models single-scale Swin Transformer(SwinT)(Approximately 1% increase), on the datasets of the Kvasir-SEG, ISIC2017, MICCAI EndoVisSub-Instrument and CadVesSet. The experimental results verify that the proposed dual scale shifted window attention benefits the communication of patch information and can enhance the segmentation results to state of the art. We also implement an ablation study on the effect of the shifted window size on the information flow efficiency and verify that the dual-scale shifted window attention is the optimized network design. Our study highlights the significant impact of network structure design on visual performance, providing valuable insights for the design of networks based on Transformer architectures.
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- 2024
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16. Comprehensive analysis of pepper (Capsicum annuum) RAV genes family and functional identification of CaRAV1 under chilling stress
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Minkun Pei, Ping Yang, Jian Li, Yanzhuang Wang, Juan Li, Hongjun Xu, and Jie Li
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RAV gene family ,Transcription factor ,Chilling stress ,VIGS ,Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Despite its known significance in plant abiotic stress responses, the role of the RAV gene family in the response of Capsicum annuum to chilling stress remains largely unexplored. Results In this study, we identified and characterized six members of the CaRAV gene subfamily in pepper plants through genome-wide analysis. Subsequently, the CaRAV subfamily was classified into four branches based on homology with Arabidopsis thaliana, each exhibiting relatively conserved domains within the branch. We discovered that light response elements accounted for the majority of CaRAVs, whereas low-temperature response elements were specific to the NGA gene subfamily. After pepper plants were subjected to chilling stress, qRT‒PCR analysis revealed that CaRAV1, CaRAV2 and CaNGA1 were significantly induced in response to chilling stress, indicating that CaRAVs play a role in the response to chilling stress. Using virus-induced gene silencing (VIGS) vectors, we targeted key members of the CaRAV gene family. Under normal growth conditions, the MDA content and SOD enzyme activity of the silenced plants were slightly greater than those of the control plants, and the REC activity was significantly greater than that of the control plants. The levels of MDA and electrolyte leakage were greater in the silenced plants after they were exposed to chilling stress, and the POD and CAT enzyme activities were significantly lower than those in the control, which was particularly evident under repeated chilling stress. In addition, the relative expression of CaPOD and CaCAT was greater in V2 plants upon repeated chilling stress, especially CaCAT was significantly greater in V2 plants than in the other two silenced plants, with 3.29 and 1.10 increases within 12 and 24 h. These findings suggest that CaRAV1 and CaNGA1 positively regulate the response to chilling stress. Conclusions Silencing of key members of the CaRAV gene family results in increased susceptibility to chilling damage and reduced antioxidant enzyme activity in plants, particularly under repeated chilling stress. This study provides valuable information for understanding the classification and putative functions of RAV transcription factors in pepper plants.
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- 2024
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17. The plant-sucking insect selects assembly of the gut microbiota from environment to enhance host reproduction
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Hong-Wei Shan, Xie-Jiang Xia, Yi-Lu Feng, Wei Wu, Hong-Jie Li, Zong-Tao Sun, Jun-Min Li, and Jian-Ping Chen
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Microbial ecology ,QR100-130 - Abstract
Abstract Plant-sucking insects have intricate associations with a diverse array of microorganisms to facilitate their adaptation to specific ecological niches. The midgut of phytophagous true bugs is generally structured into four distinct compartments to accommodate their microbiota. Nevertheless, there is limited understanding regarding the origins of these gut microbiomes, the mechanisms behind microbial community assembly, and the interactions between gut microbiomes and their insect hosts. In this study, we conducted a comprehensive survey of microbial communities within the midgut compartments of a bean bug Riptortus pedestris, soybean plant, and bulk soil across 12 distinct geographical fields in China, utilizing high-throughput sequencing of the 16 S rRNA gene. Our findings illuminated that gut microbiota of the plant-sucking insects predominantly originated from the surrounding soil environment, and plants also play a subordinate role in mediating microbial acquisition for the insects. Furthermore, our investigation suggested that the composition of the insect gut microbiome was probably shaped by host selection and/or microbe-microbe interactions at the gut compartment level, with marginal influence from soil and geographical factors. Additionally, we had unveiled a noteworthy dynamic in the acquisition of core bacterial taxa, particularly Burkholderia, which were initially sourced from the environment and subsequently enriched within the insect midgut compartments. This bacterial enrichment played a significant role in enhancing insect host reproduction. These findings contribute to our evolving understanding of microbiomes within the insect-plant-soil ecosystem, shedding additional light on the intricate interactions between insects and their microbiomes that underpin the ecological significance of microbial partnerships in host adaptation.
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- 2024
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18. Psychometric properties of the Fraboni scale of ageism (FSA) applied to long-term caregivers in nursing homes
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Jie Li, Ziyan Dong, Wen Xie, Liuqing Yang, and Xiaojing Qi
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Fraboni scale of ageism ,Long-term care ,Reliability ,Validity ,Psychometric properties ,Geriatrics ,RC952-954.6 - Abstract
Abstract Background The aging society has resulted in enormous demand for long-term care services. However, ageism is a common phenomenon in long-term care facilities, which not only hinders the quality of care for the recipients but also negatively influences caregivers’ well-being. In this paper, we first applied the Fraboni Scale of Ageism (FSA) to evaluate its reliability and construct validity among Chinese long-term caregivers in nursing homes. This study could contribute to assessing the prevalence of ageism in Chinese long-term caregivers, prompting facilities and the government to recognize the issue of ageism and explore necessary interventions to reduce ageism in long-term caregivers. Methods This is a cross-sectional study. We recruited 392 long-term caregivers using a convenience sampling strategy in nursing homes from two cities in Chinese central and northern regions. Parameters included the demographic characteristics, Cronbach’s alpha coefficients, and intraclass correlation coefficient. The construct validity was conducted by exploratory factor analysis and confirmatory factor analysis. Results The Cronbach’s alpha of FSA (Chinese version) was 0.856 and ICC was 0.871. The factor analysis identified 3 principal factors, explaining 43.95% of the total variance. The 3-factor model was confirmed to fit by confirmatory factor analysis. Conclusions The findings confirm that the FSA is easy to use and has good psychometric properties. This study will contribute to improving the condition of ageism, thereby improving the quality of care for the elderly and retention of professional talents in the LTC system.
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- 2024
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19. A novel splicing mutation DNAH5 c.13,338 + 5G > C is involved in the pathogenesis of primary ciliary dyskinesia in a family with primary familial brain calcification
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Xiu-juan Yao, Qian Chen, Hong-ping Yu, Dan-dan Ruan, Shi-jie Li, Min Wu, Li-sheng Liao, Xin-fu Lin, Zhu-ting Fang, Jie-wei Luo, and Bao-song Xie
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Primary ciliary dyskinesia ,Primary familial brain calcification ,DNAH5 ,MYORG ,Splicing mutation ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Primary ciliary dyskinesia (PCD) is an autosomal recessive hereditary disease characterized by recurrent respiratory infections. In clinical manifestations, DNAH5 (NM_001361.3) is one of the recessive pathogenic genes. Primary familial brain calcification (PFBC) is a neurodegenerative disease characterized by bilateral calcification in the basal ganglia and other brain regions. PFBC can be inherited in an autosomal dominant or recessive manner. A family with PCD caused by a DNAH5 compound heterozygous variant and PFBC caused by a MYORG homozygous variant was analyzed. Methods In this study, we recruited three generations of Han families with primary ciliary dyskinesia combined with primary familial brain calcification. Their clinical phenotype data were collected, next-generation sequencing was performed to screen suspected pathogenic mutations in the proband and segregation analysis of families was carried out by Sanger sequencing. The mutant and wild-type plasmids were constructed and transfected into HEK293T cells instantaneously, and splicing patterns were detected by Minigene splicing assay. The structure and function of mutations were analyzed by bioinformatics analysis. Results The clinical phenotypes of the proband (II10) and his sister (II8) were bronchiectasis, recurrent pulmonary infection, multiple symmetric calcifications of bilateral globus pallidus and cerebellar dentate nucleus, paranasal sinusitis in the whole group, and electron microscopy of bronchial mucosa showed that the ciliary axoneme was defective. There was also total visceral inversion in II10 but not in II8. A novel splice variant C.13,338 + 5G > C and a frameshift variant C.4314delT (p. Asn1438lysfs *10) were found in the DNAH5 gene in proband (II10) and II8. c.347_348dupCTGGCCTTCCGC homozygous insertion variation was found in the MYORG of the proband. The two pathogenic genes were co-segregated in the family. Minigene showed that DNAH5 c.13,338 + 5G > C has two abnormal splicing modes: One is that part of the intron bases where the mutation site located is translated, resulting in early translation termination of DNAH5; The other is the mutation resulting in the deletion of exon76. Conclusions The newly identified DNAH5 splicing mutation c.13,338 + 5G > C is involved in the pathogenesis of PCD in the family, and forms a compound heterozygote with the pathogenic variant DNAH5 c.4314delT lead to the pathogenesis of PCD.
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- 2024
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20. The association between visceral adiposity index and risk of type 2 diabetes mellitus
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Haoran Zhou, Tianshu Li, Jie Li, Xin Zhuang, and Jie Yang
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T2DM1 ,VAI2 ,NHANES3 ,Cross-sectional study4 ,Relationship5 ,Medicine ,Science - Abstract
Abstract Relationships between the visceral adiposity index (VAI) and type 2 diabetes mellitus (T2DM) have been underexplored. The purpose of this study is to explore association between VAI and T2DM in adults in the US. Based on the National Health and Nutrition Examination Survey 2007–2018, 11,214 participants aged 20 years or older were included in a cross-sectional study. Multifactorial logistic regression analysis and smoothed curve fitting analysis were performed to investigate links between VAI and the prevalence of T2DM, as well as the stability and incidence between subgroups. In a fully adjusted continuous model, the aggregate population risk of T2DM increased 0.43-fold with each 1-unit increase in VAI [odds ratio (OR) = 1.43; 95% confidence interval (CI) 1.35–1.50]. In the fully adjusted categorical model with VAI scores stratified by quartiles, results showed a higher T2DM advantage among participants in the second, third, and fourth quartiles (Q2: OR 1.35, 95% CI 1.06–1.71; Q3: OR 2.46, 95% CI 1.95–3.11; Q4: OR 4.42, 95% CI 3.55–05.50). Compared with Q1, the prevalence of T2DM in the total population increased 3.42-fold in Q4. The above results indicated that VAI was positively associated with the prevalence of T2DM, which was consistent and nonlinear with the smoothed curve-fitting analysis (P for non-linear = 0). Subgroup analyses after adjusting for covariates showed that keeping with the overall population results, it also was found that there was an interaction between sex and hypertension in the subgroups. VAI was positively associated with the prevalence of T2DM and was more prevalent in women, non-hypertensive than in men, hypertensive populations.
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- 2024
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21. The causal role between circulating immune cells and diabetic nephropathy: a bidirectional Mendelian randomization with mediating insights
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Ning Shen, Shangwei Lu, Zhijuan Kong, Ying Gao, Jinxiu Hu, Shuxuan Si, Junlin Wang, Jie Li, Wei Han, Rong Wang, and Zhimei Lv
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Immune cells ,Diabetic nephropathy ,Mendelian randomization ,Metabolite ,Nutritional diseases. Deficiency diseases ,RC620-627 - Abstract
Abstract Diabetic nephropathy (DN) is a critical inflammatory condition linked to diabetes, affecting millions worldwide. This study employs Mendelian randomization (MR) to explore the causal relationship between immune cell signatures and DN, analyzing over 731 immune signatures and incorporating data from 1400 metabolites to investigate potential mediators. Despite no statistically significant influence of DN on immunophenotypes after FDR correction, some phenotypes with unadjusted low P-values warranted mention, including CD34 on Hematopoietic Stem Cell (Myeloid cell Panel), CD45 on CD33− HLA DR− (Myeloid cell Panel). Furthermore, three immunophenotypes were identified to have a significant impact on DN risk: CD16−CD56 on HLA DR+ NK (TBNK Panel), CD45 on HLA DR+ T cell (TBNK Panel), and CD33dim HLA DR+ CD11b+ AC (Myeloid cell Panel). Our findings underscore the critical role of immune cells in DN, highlighting potential mediators and offering new insights into its underlying mechanisms.
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- 2024
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22. Accuracy of expanded noninvasive prenatal testing for maternal copy number variations: A comparative study with CNV-seq of maternal lymphocyte DNA
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Honglei Duan, Wanjun Wang, Ying Zhang, Xuemei Chen, Zihan Jiang, and Jie Li
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Noninvasive prenatal testing ,Copy number variations ,Lymphocyte DNA ,Cell-free DNA ,Gynecology and obstetrics ,RG1-991 - Abstract
Objective: To evaluate the accuracy of expanded noninvasive prenatal testing (NIPT) for maternal copy number variations. Materials and methods: Expanded NIPT was used to detect CNVs ≥2 Mb at a whole-genome scale. The threshold of maternal deletion was copy numbers (CN) ≤ 1.6, and the threshold of maternal duplication was CN ≥ 2.4. Results: Of the 5440 pregnant women with successful expanded NIPT results, 28 maternal CNVs ≥2 Mb were detected in 27 pregnant women. Except for five cases reported as test failure, 23 CNVs ≥2 Mb were confirmed among the remaining 22 pregnant women by CNV-seq of maternal lymphocyte DNA. The genomic location, copy numbers and fragment size of maternal CNVs reported by expanded NIPT were consistent with the results of CNV-seq of maternal lymphocyte DNA. Conclusions: Maternal CNVs ≥2 Mb can be accurately evaluated according to the CN indicated by expanded NIPT results.
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- 2024
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23. Relationships between nine neuropsychiatric disorders and cervical cancer: insights from genetics, causality and shared gene expression patterns
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Jie Li, Jie Qi, Junqin Zhang, Yuan Zhang, and Xianghua Huang
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Cervical cancer ,Depression ,Genetic correlation ,Causal association ,Gene expression patterns ,Gynecology and obstetrics ,RG1-991 ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background Neuropsychiatric disorders and cervical cancer exert substantial influences on women’s health. Furthermore, neuropsychiatric disorders frequently manifest as common symptoms in cancer patients, potentially increasing the risk of malignant neoplasms. This study aimed to identify neuropsychiatric disorders that are genetically and causally related to cervical cancer and to investigate the molecular mechanisms underlying these associations. Methods GWAS data related to nine neuropsychiatric disorders, namely, schizophrenia, bipolar disorder, autism spectrum disorder, Parkinson’s disease, anxiety, Alzheimer’s disease, mood disorders, depression, and alcohol dependence, were obtained to calculate heritability (h 2) and genetic correlation (rg) with cervical cancer using linkage disequilibrium score regression (LDSC). Mendelian randomization (MR) analysis of the two cohorts was employed to assess the causal effects. Shared gene expression pattern analysis was subsequently conducted to investigate the molecular mechanism underlying these significant associations. Results Anxiety, mood disorders, depression, and alcohol dependence were genetically correlated with cervical cancer (all adjusted P
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- 2024
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24. Patent conversion of a novel closed chest drainage device
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Shaoqing Huang, Xu Song, Zhongkai Tong, Qiang Shi, and Jie Li
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Closed chest drainage ,Lung resection surgery ,Negative pressure suction ,3D printing ,Surgery ,RD1-811 ,Anesthesiology ,RD78.3-87.3 - Abstract
Abstract Closed chest drainage is typically necessary following Lobar and Sublobar resections to evacuate gases and fluids from the thoracic cavity, eliminate residual pleural space for lung expansion, and maintain negative pressure. Currently, three conventional closed chest drainage systems are commonly employed: single-chamber, double-chamber, and triple-chamber systems; each system has its own advantages and disadvantages. Despite the emergence of digital drainage systems in recent years, their high cost hinders their widespread adoption. Based on this premise, our research team has achieved a patent for a micro air pump-integrated chest closed drainage bottle, which has been further developed into a novel device integrating a three-chamber system with negative pressure control and power supply capabilities. This device enables patients undergoing perioperative lung procedures to ambulate freely while simultaneously receiving chest suction therapy—a concept that theoretically promotes rapid postoperative recovery. Moreover, this device offers economic benefits and holds potential for clinical implementation (particularly in economically underdeveloped regions). In this article, we modified the thoracic closed drainage device based on our patent and presented this novel thoracic closed drainage device after 3D printing and assembly.
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- 2024
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25. A novel lncRNA LOC101928222 promotes colorectal cancer angiogenesis by stabilizing HMGCS2 mRNA and increasing cholesterol synthesis
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Lisha Chang, Jie Ding, Juan Pu, Jing Zhu, Xiang Zhou, Qian Luo, Jie Li, Mengsen Qian, Shuhui Lin, Juan Li, and Keming Wang
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Colorectal cancer ,LOC101928222 ,Angiogenesis ,m6A ,Cholesterol synthesis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Metastasis is the leading cause of mortality in patients with colorectal cancer (CRC) and angiogenesis is a crucial factor in tumor invasion and metastasis. Long noncoding RNAs (lncRNAs) play regulatory functions in various biological processes in tumor cells, however, the roles of lncRNAs in CRC-associated angiogenesis remain to be elucidated in CRC, as do the underlying mechanisms. Methods We used bioinformatics to screen differentially expressed lncRNAs from TCGA database. LOC101928222 expression was assessed by qRT-PCR. The impact of LOC101928222 in CRC tumor development was assessed both in vitro and in vivo. The regulatory mechanisms of LOC101928222 in CRC were investigated by cellular fractionation, RNA-sequencing, mass spectrometric, RNA pull-down, RNA immunoprecipitation, RNA stability, and gene-specific m6A assays. Results LOC101928222 expression was upregulated in CRC and was correlated with a worse outcome. Moreover, LOC101928222 was shown to promote migration, invasion, and angiogenesis in CRC. Mechanistically, LOC101928222 synergized with IGF2BP1 to stabilize HMGCS2 mRNA through an m6A-dependent pathway, leading to increased cholesterol synthesis and, ultimately, the promotion of CRC development. Conclusions In summary, these findings demonstrate a novel, LOC101928222-based mechanism involved in the regulation of cholesterol synthesis and the metastatic potential of CRC. The LOC101928222-HMGCS2-cholesterol synthesis pathway may be an effective target for diagnosing and managing CRC metastasis.
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- 2024
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26. Research Progress on Bioactivity and Mechanism of Tea Polyphenols
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Zhiyun CHEN, Jie LI, Yu FENG, Taiyu REN, Yiming CAI, Junling LI, Hongyan YI, and Shuangfeng JIANG
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tea polyphenols ,chemical composition ,biological activity ,mechanism of action ,antioxidant ,anticancer ,regulation of metabolic syndrome ,anti-radiation ,Food processing and manufacture ,TP368-456 - Abstract
Tea polyphenols are a class of polyphenolic mixtures with phenolic hydroxyl structure in tea plants, which are the main functional component of tea, and the content is relatively high in green tea. Tea polyphenol bioactivity research gains popularity, in the functional food, drug development, preservation and preservation of preservatives and other areas with broad application prospects. Tea polyphenols have a variety of biological activities such as antioxidant, anticancer, hypolipidemic, blood sugar regulation, antibacterial, anti-radiation and so on. Their mechanism of action mainly includes regulating protein kinase B (AKT), nuclear factor-kappa B (NF-κB), epithelial growth factor receptor (EGFR), adenylate activated protein kinase (AMPK) and other signalling pathways and related proteins. By analyzing the relevant research literature in recent years, we review the material properties, biological activities, mechanisms and applications of tea polyphenols, with a view to providing reference for the development of tea polyphenol-containing functional foods and natural medicines.
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- 2024
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27. Optuna-DFNN: An Optuna framework driven deep fuzzy neural network for predicting sintering performance in big data
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Yifan Li, Yanpeng Cao, Jintang Yang, Mingyu Wu, Aimin Yang, and Jie Li
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Big data ,Deep fuzzy neural networks(DFNN) ,Optuna ,Sintering performance ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Sintering performance index can reflect the quality of sintered ore, and the level of sintered ore performance directly affects the stability of blast furnace production. Accurate prediction of sinter performance metrics is essential to optimise sinter quality, improve production efficiency and reduce energy consumption. Based on the sintering big data, this paper proposes the Optuna-DFNN model by combining the fuzzy neural network algorithm, the deep neural network algorithm and the Optuna framework to address the problems of difficulty in tuning the parameter, lack of self-learning ability, and poor generalisation of the model of the traditional method when faced with the input of multiple parameters. The paper predicts the four prediction indexes of yield rate, return fines ratio, drum index and RDI+3.15 respectively. Among them, the relative error of the prediction of the yield rate is within 1.3 %, the relative error of the prediction of the return fines ratio is within 2.8 %, the relative error of the prediction of the drum index is within 0.32 %, and the relative error of the prediction of the RDI+3.15 is within 1.4 %. The results indicate that the Optuna-DFNN model has better performance in predicting sintering performance metrics. Based on the Optuna-DFNN sintered ore performance prediction model, the quality of sintered ore can be accurately predicted, the sintering process parameters can be adjusted in a timely manner, the sintering process can be optimized, and the utilization coefficient of sintering can be improved. Provide a reference for the optimisation of production processes, with a positive impact on cost reduction, environmental protection and increased sustainability of production.
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- 2024
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28. Evolution of China’s ecological compensation and future policy orientation:Analysis based on the Institutional Analysis and Development (IAD) framework
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ZHANG Wenbin, WANG Jie, LI Guoping
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ecological compensation ,theoretical logic ,institutional analysis and development (iad) framework ,government led ,evolutionary analysis ,institutional improvement ,china ,Environmental sciences ,GE1-350 ,Biology (General) ,QH301-705.5 - Abstract
[Objective] This study aimed to clarify the evolutionary trends of China’s ecological compensation mechanism and to further promote the construction of ecological civilization and a beautiful China. [Methods] From the perspective of institutional change, the study employed the Institutional Analysis and Development (IAD) framework to track, examine, and deconstruct policy changes about China’s ecological compensation mechanism from 1978 to 2023. [Results] The study found that: (1) From the perspective of institutional change, the evolution of the ecological compensation mechanism has experienced three stages—an exploratory stage of “polluters pay”, a formative stage of “beneficiaries pay”, and a refinement stage of “beneficiaries pay, protectors compensated”. The government has always been the primary participant in the ecological protection actions, dominating the direction of ecological compensation mechanism changes. (2) In terms of the internal logic of the institutional change, government leadership, clarifying the rights-responsibilities-benefits of the entities, transitioning from separate management to integrated management, and the marketization of ecological compensation are the main features and inherent pattern of China’s ecological compensation mechanism changes. [Conclusion] We should focus on four aspects to improve the ecological compensation system: improving the property rights system of natural resource assets and the management system of national territorial space of natural resources, forming a diversified and market-oriented ecological compensation method led by the government and participated by all parties, establishing a digital driven investigation and monitoring system of ecological resource protection and utilization, and forming a closed-loop mechanism of transforming lucid waters and lush mountains into mountains of gold and silver and then feeding back clear waters and green mountains.
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- 2024
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29. Minimally-invasive implantable device enhances brain cancer suppression
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Xiaona Cao, Jie Li, Jinliang Ren, Jiajin Peng, Ruyue Zhong, Jiahao He, Ting Xu, Zhenhua Yu, Huawei Jin, Siqi Hao, Ruiwei Liu, and Bingzhe Xu
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Intracranial Brain Tumor Inhibition ,Tumor Treating Field ,Customized Treatment ,Brain Tumors ,Medicine (General) ,R5-920 ,Genetics ,QH426-470 - Abstract
Abstract Current brain tumor treatments are limited by the skull and BBB, leading to poor prognosis and short survival for glioma patients. We introduce a novel minimally-invasive brain tumor suppression (MIBTS) device combining personalized intracranial electric field therapy with in-situ chemotherapeutic coating. The core of our MIBTS technique is a wireless-ultrasound-powered, chip-sized, lightweight device with all functional circuits encapsulated in a small but efficient “Swiss-roll” structure, guaranteeing enhanced energy conversion while requiring tiny implantation windows ( ~ 3 × 5 mm), which favors broad consumers acceptance and easy-to-use of the device. Compared with existing technologies, competitive advantages in terms of tumor suppressive efficacy and therapeutic resolution were noticed, with maximum ~80% higher suppression effect than first-line chemotherapy and 50–70% higher than the most advanced tumor treating field technology. In addition, patient-personalized therapy strategies could be tuned from the MIBTS without increasing size or adding circuits on the integrated chip, ensuring the optimal therapeutic effect and avoid tumor resistance. These groundbreaking achievements of MIBTS offer new hope for controlling tumor recurrence and extending patient survival.
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- 2024
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30. Study on the Length of Smoke Backlayering of Double-Source Fire in Tunnels
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Zhongqiu Liang, Xuyao Qi, Cunxiang Wei, Liangzhou Chen, Yuxuan Rao, Jie Li, Weiwei Su, and Yabo Zhang
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Chemistry ,QD1-999 - Published
- 2024
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31. Regulatory effect of extracellular matrix stiffness on the plasticity of human prostate cancer cells
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ZHENG Yu, MA Lei, LI Ruizhi, MU Jie, LI Jing, WANG Dong, ZHU Hai
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prostatic neoplasms ,cell line, tumor ,extracellular matrix ,cell plasticity ,Medicine - Abstract
Objective To investigate the regulatory effect of extracellular matrix (ECM) stiffness on the plasticity of human prostate cancer cells (LNCaP). Methods Human LNCaP cells were cultured in ECM culture dishes with four types of stiffness (i.e., Young’s modulus of 3 GPa [group A], 20 kPa [group B], 6 kPa [group C], and 1 kPa [group D]) for one week. The morphology of cells on substrates of different stiffness values was observed for each group using bright-field microscopy and fluorescence microscopy. Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) was used to measure the expression levels of luminal cell marker genes (AR, CK8, CK18, and PSA), basal cell marker genes (CK5 and P63), and proliferative genes (KI67 and PCNA) in each group. Results Bright-field microscopy and fluorescence microscopy showed that human LNCaP cells in group A exhibited typically spread epithelial cell morphology, whereas the cells in groups B to D showed the state of agglomerated small cell sheets, and the cells in group D formed a three-dimensional organ-like structure. RT-qPCR results showed that there were no significant differences between the four groups in the expression levels of KI67 and P63 genes in human LNCaP cells (P>0.05). The expression level of PCNA gene in group B was significantly higher than that in groups A and C (F=34.96,t=8.39,6.37,P
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- 2024
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32. The Role of Spinal Cord Compression in Predicting Intraoperative Neurophysiological Monitoring Events in Patients With Kyphotic Deformity: A Magnetic Resonance Imaging-Based Study
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Zhen Jin, Jie Li, Hui Xu, Zongshan Hu, Yanjie Xu, Ziyang Tang, Yong Qiu, Zhen Liu, and Zezhang Zhu
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intraoperative neurophysiological monitoring ,kyphosis ,spinal cord classification ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Objective To establish a novel classification system for predicting the risk of intraoperative neurophysiological monitoring (IONM) events in surgically-treated patients with kyphotic deformity. Methods Patients with kyphotic deformity who underwent surgical correction of cervicothoracic, thoracic, or thoracolumbar kyphosis in our center from July 2005 to December 2020 were recruited. We proposed a classification system to describe the morphology of the spinal cord on T2-weighted sagittal magnetic resonance imaging: type A, circular/symmetric cord with visible cerebrospinal fluid (CSF) between the cord and vertebral body; type B, circular/oval/symmetric cord with no visible CSF between the cord and vertebral body; type C, spinal cord that is fattened/deformed by the vertebral body, with no visible CSF between the cord and vertebral body. Furthermore, based on type C, the spinal cord compression ratio (CR) < 50% was defined as the subtype C-, while the spinal cord CR ≥ 50% was defined as the subtype C+. IONM event was documented, and a comparative analysis was made to evaluate the prevalence of IONM events among patients with diverse spinal cord types. Results A total of 294 patients were reviewed, including 73 in type A; 153 in type B; 53 in subtype C- and 15 in subtype C+. Lower extremity transcranial motor-evoked potentials and/or somatosensory evoked potentials were lost intraoperatively in 41 cases (13.9%), among which 4 patients with type C showed no return of spinal cord monitoring data. The 14 subtype C+ patients (93.3%) had IONM events. Univariate logistic regression analysis showed that patients with a type C spinal cord (subtype C-: odds ratio [OR], 10.390; 95% confidence interval [CI], 2.215–48.735; p = 0.003; subtype C+, OR, 497.000; 95% CI, 42.126– 5,863.611; p < 0.001) are at significantly higher risk of a positive IONM event during deformity correction compared to those with a type A. In further multiple logistic regression analysis, the spinal cord classification (OR, 5.371; 95% CI, 2.966–9.727; p < 0.001) was confirmed as an independent risk factor for IONM events. Conclusion We presented a new spinal cord classification system based on the relative position of the spinal cord and vertebrae to predict the risk of IONM events in patients with kyphotic deformity. In patients with type C spinal cord, especially those in C+ cases, it is essential to be aware of potential IONM events, and adopt standard operating procedures to facilitate neurological recovery.
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- 2024
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33. Consensus on the clinical diagnosis and treatment of grade 3 pancreatic neuroendocrine tumors
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Jie Chen, Wenming Wu, Chunmei Bai, Yihebali Chi, Li Huo, Liming Jiang, Yuan Ji, Jie Luo, Jie Li, Jingnan Li, Wenhui Lou, Chenghao Shao, Lin Shen, Feng Wang, Yu Wang, Ling Xue, Jin Xu, Chunhui Yuan, Xianjun Yu, Xiaoyu Yin, Hong Zhao, Xiongzeng Zhu, and Yupei Zhao
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
The World Health Organization (WHO) 2017 classifications for neuroendocrine neoplasms (NENs) subdivided grade 3 pancreatic neuroendocrine neoplasms (pNENs) into G3 well-differentiated pancreatic neuroendocrine tumors (G3 pNETs) and poorly differentiated pancreatic neuroendocrine carcinomas (pNECs), according to the mitotic count, Ki-67 index, and cell differentiation. As a new category, G3 pNETs remain a challenging group of tumors to manage by lacking large randomized trials and consensus to support its clinical practice. Therefore, the Chinese Pancreatic Surgery Association, Chinese Society of Surgery, Chinese Medical Association gathered experts in this field to formulate this consensus for the diagnosis and treatment of G3 pNETs.
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- 2024
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34. Effects of aeolian deposition on soil properties and microbial carbon metabolism function in farmland of Songnen Plain, China
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Jixian Mo, Ziwei Song, Yanjing Che, Jie Li, Tianyi Liu, Jingyi Feng, Ziying Wang, Jiandong Rong, and Siyu Gu
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Aeolian deposition ,Soil properties ,Metagenomics ,Carbon metabolism ,Songnen Plain ,Medicine ,Science - Abstract
Abstract The effects of wind erosion, one of the crucial causes of soil desertification in the world, on the terrestrial ecosystem are well known. However, ecosystem responses regarding soil microbial carbon metabolism to sand deposition caused by wind erosion, a crucial driver of biogeochemical cycles, remain largely unclear. In this study, we collected soil samples from typical aeolian deposition farmland in the Songnen Plain of China to evaluate the effects of sand deposition on soil properties, microbial communities, and carbon metabolism function. We also determined the reads number of carbon metabolism-related genes by high-throughput sequencing technologies and evaluated the association between sand deposition and them. The results showed that long-term sand deposition resulted in soil infertile, roughness, and dryness. The impacts of sand deposition on topsoil were more severe than on deep soil. The diversity of soil microbial communities was significantly reduced due to sand deposition. The relative abundances of Nitrobacteraceae, Burkholderiaceae, and Rhodanobacteraceae belonging to α-Proteobacteria significantly decreased, while the relative abundances of Streptomycetaceae and Geodermatophilaceae belonging to Actinobacteria increased. The results of the metagenomic analysis showed that the gene abundances of carbohydrate metabolism and carbohydrate-activity enzyme (GH and CBM) significantly decreased with the increase of sand deposition amount. The changes in soil microbial community structure and carbon metabolism decreased soil carbon emissions and carbon cycling in aeolian deposition farmland, which may be the essential reasons for land degradation in aeolian deposition farmland.
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- 2024
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35. Identifying significant structural factors associated with knee pain severity in patients with osteoarthritis using machine learning
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Zhengkuan Zhao, Mingkuan Zhao, Tao Yang, Jie Li, Chao Qin, Ben Wang, Li Wang, Bing Li, and Jun Liu
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Osteoarthritis ,Machine learning ,Knee pain severity ,Convolutional neural networks ,Class activation mapping ,Medicine ,Science - Abstract
Abstract Our main objective was to use machine learning methods to identify significant structural factors associated with pain severity in knee osteoarthritis patients. Additionally, we assessed the potential of various classes of imaging data using machine learning techniques to gauge knee pain severity. The data of semi-quantitative assessments of knee radiographs, semi-quantitative assessments of knee magnetic resonance imaging (MRI), and MRI images from 567 individuals in the Osteoarthritis Initiative (OAI) were utilized to train a series of machine learning models. Models were constructed using five machine learning methods: random forests (RF), support vector machines (SVM), logistic regression (LR), decision tree (DT), and Bayesian (Bayes). Employing tenfold cross-validation, we selected the best-performing models based on the area under the curve (AUC). The study results indicate no significant difference in performance among models using different imaging data. Subsequently, we employed a convolutional neural network (CNN) to extract features from magnetic resonance imaging (MRI), and class activation mapping (CAM) was utilized to generate saliency maps, highlighting regions associated with knee pain severity. A radiologist reviewed the images, identifying specific lesions colocalized with the CAM. The review of 421 knees revealed that effusion/synovitis (30.9%) and cartilage loss (30.6%) were the most frequent abnormalities associated with pain severity. Our study suggests cartilage loss and synovitis/effusion lesions as significant structural factors affecting pain severity in patients with knee osteoarthritis. Furthermore, our study highlights the potential of machine learning for assessing knee pain severity using radiographs.
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- 2024
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36. A prospective, randomized, multicenter, open‐label trial comparing survival in subjects receiving peritoneal dialysis or conventional in‐center hemodialysis
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Li Fan, Xiao Yang, Huaying Shen, Menghua Chen, Hao Zhang, Zhaohui Ni, Hongli Lin, Hongtao Yang, Qinkai Chen, Hongyu Chen, Gengru Jiang, Jianqin Wang, Jiuyang Zhao, Zhuxing Sun, Aiping Yin, Aili Jiang, Yun Li, Hui Peng, Nan Chen, Chuanming Hao, Yaozhong Kong, Rong Rong, Jie Li, Xia Zou, Haotian Luo, Jiaqi Qian, and Xueqing Yu
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end‐stage kidney disease ,peritoneal dialysis ,hemodialysis ,patient survival ,Medicine - Abstract
Abstract Background Peritoneal dialysis (PD) and conventional in‐center hemodialysis (HD) are treatment options for patients with end‐stage kidney disease (ESKD). However, their impact on all‐cause mortality is unclear. Methods We conducted a multicenter, open‐label, randomized, non‐inferiority trial to determine the effect of dialysis modality on mortality in patients with ESKD. Eligible patients were recruited from 30 sites across China and assigned to receive either PD or HD in a ratio of 1:1. The primary outcome was all‐cause mortality. Non‐inferiority was defined as the upper bound of the one‐sided 95% confidence interval (CI) for the hazard ratio (HR) being ≤1.25. Results A total of 414 patients with incident ESKD were randomly assigned to PD (n = 213) or HD (n = 201). During a median follow‐up of 1.7 years, 37 patients in the PD group and 31 in the HD group died, giving respective event rates per patient‐year of 0.061 and 0.071. The HR for mortality on PD in comparison with HD was 0.76 (95% CI 0.47–1.24) after adjustment for age, sex, and diabetes status, achieving the limit for non‐inferiority. There were more adverse events (p = 0.003), serious adverse events (p = 0.009), and adverse events leading to hospitalization (p = 0.003) in the PD group than in the HD group; however, there was no significant between‐group difference in adverse events leading to death or discontinuation of treatment. Conclusions PD was non‐inferior to conventional in‐center HD in terms of survival in patients with ESKD. Our findings underscore the need for shared decision‐making between physicians and patients regarding the selection of dialysis modality. Trial registration Registered at ClinicalTrials.gov (NCT01413074).
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- 2024
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37. UBQLN1 links proteostasis and mitochondria function to telomere maintenance in human embryonic stem cells
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Shuang Zhao, Jie Li, Songqi Duan, Chang Liu, Hua Wang, Jiangtao Lu, Nannan Zhao, Xiaoyan Sheng, Yiwei wu, Yanjun Li, Baofa Sun, and Lin Liu
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UBQLN1 ,Telomere ,Mitochondria ,Ubiquitin-proteasome ,Proteostasis ,hESC differentiation ,Medicine (General) ,R5-920 ,Biochemistry ,QD415-436 - Abstract
Abstract Background Telomeres consist of repetitive DNA sequences at the chromosome ends to protect chromosomal stability, and primarily maintained by telomerase or occasionally by alternative telomere lengthening of telomeres (ALT) through recombination-based mechanisms. Additional mechanisms that may regulate telomere maintenance remain to be explored. Simultaneous measurement of telomere length and transcriptome in the same human embryonic stem cell (hESC) revealed that mRNA expression levels of UBQLN1 exhibit linear relationship with telomere length. Methods In this study, we first generated UBQLN1-deficient hESCs and compared with the wild-type (WT) hESCs the telomere length and molecular change at RNA and protein level by RNA-seq and proteomics. Then we identified the potential interacting proteins with UBQLN1 using immunoprecipitation-mass spectrometry (IP-MS). Furthermore, the potential mechanisms underlying the shortened telomeres in UBQLN1-deficient hESCs were analyzed. Results We show that Ubiquilin1 (UBQLN1) is critical for telomere maintenance in human embryonic stem cells (hESCs) via promoting mitochondrial function. UBQLN1 deficiency leads to oxidative stress, loss of proteostasis, mitochondria dysfunction, DNA damage, and telomere attrition. Reducing oxidative damage and promoting mitochondria function by culture under hypoxia condition or supplementation with N-acetylcysteine partly attenuate the telomere attrition induced by UBQLN1 deficiency. Moreover, UBQLN1 deficiency/telomere shortening downregulates genes for neuro-ectoderm lineage differentiation. Conclusions Altogether, UBQLN1 functions to scavenge ubiquitinated proteins, preventing their overloading mitochondria and elevated mitophagy. UBQLN1 maintains mitochondria and telomeres by regulating proteostasis and plays critical role in neuro-ectoderm differentiation.
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- 2024
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38. Landform and lithospheric development contribute to the assembly of mountain floras in China
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Wan-Yi Zhao, Zhong-Cheng Liu, Shi Shi, Jie-Lan Li, Ke-Wang Xu, Kang-You Huang, Zhi-Hui Chen, Ya-Rong Wang, Cui-Ying Huang, Yan Wang, Jing-Rui Chen, Xian-Ling Sun, Wen-Xing Liang, Wei Guo, Long-Yuan Wang, Kai-Kai Meng, Xu-Jie Li, Qian-Yi Yin, Ren-Chao Zhou, Zhao-Dong Wang, Hao Wu, Da-Fang Cui, Zhi-Yao Su, Guo-Rong Xin, Wei-Qiu Liu, Wen-Sheng Shu, Jian-Hua Jin, David E. Boufford, Qiang Fan, Lei Wang, Su-Fang Chen, and Wen-Bo Liao
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Science - Abstract
Abstract Although it is well documented that mountains tend to exhibit high biodiversity, how geological processes affect the assemblage of montane floras is a matter of ongoing research. Here, we explore landform-specific differences among montane floras based on a dataset comprising 17,576 angiosperm species representing 140 Chinese mountain floras, which we define as the collection of all angiosperm species growing on a specific mountain. Our results show that igneous bedrock (granitic and karst-granitic landforms) is correlated with higher species richness and phylogenetic overdispersion, while the opposite is true for sedimentary bedrock (karst, Danxia, and desert landforms), which is correlated with phylogenetic clustering. Furthermore, we show that landform type was the primary determinant of the assembly of evolutionarily older species within floras, while climate was a greater determinant for younger species. Our study indicates that landform type not only affects montane species richness, but also contributes to the composition of montane floras. To explain the assembly and differentiation of mountain floras, we propose the ‘floristic geo-lithology hypothesis’, which highlights the role of bedrock and landform processes in montane floristic assembly and provides insights for future research on speciation, migration, and biodiversity in montane regions.
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- 2024
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39. Pretreatment with or without GnRH-agonist before frozen–thawed embryo transfer in patients with PCOS: a systematic review and meta-analysis
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Jie Li, Zhong Lin, Sien Mo, Shujia Wang, Yanmei Li, and Qiuling Shi
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GnRH-agonist ,PCOS ,Frozen embryo transfer ,Gynecology and obstetrics ,RG1-991 - Abstract
Abstract Purpose This study was aimed to systematically evaluate the efficacy of artificial cycle-prepared frozen–thawed embryo transfer (FET) with or without gonadotrophin-releasing hormone agonist (GnRH-a) pretreatment for women with polycystic ovary syndrome (PCOS). Methods The analysis was carried out by searching the PubMed, EMBASE, and CNKI databases with a combination of keywords before October 2021. The available studies of the effects of GnRH-a pretreatment or no pretreatment on FET in PCOS patients were considered. The risk ratios (RRs) or standardized mean differences (SMD) with 95% confidence intervals (CIs) were calculated with using subgroups and sensitivity analysis. The quality evaluation for this analysis was followed. Results Seventeen studies including 3646 women were analyzed. GnRH-a pretreatment was significantly associated with a higher implantation rate (RR = 1.12, 95%CI: 1.00–1.24) and clinical pregnancy rate (RR = 1.19, 95%CI: 1.08–1.32) than the placebo. Moreover, in the GnRH-a pretreatment group, significant differences were detected for increasing the endometrium thickness among PCOS patients (SMD = 0.56, 95%CI: 0.20–0.92). However, for RCTs subgroup, no differences were observed, even after sensitivity analyses. In addition, the miscarriage rates, ectopic pregnancy rates, multiple pregnancy rates, and live birth rates were similar in both two groups. Conclusions Endometrial preparation using GnRH agonist pretreatment prior to FET seems to be the better choice for PCOS patients. However, well-designed RCTs are required for confirmation.
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- 2024
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40. The role of minimal residual disease and serum free light chain ratio in the management of multiple myeloma
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Long-Ying Zhu, Qi-Lei Hu, Liang Zhang, and Zuo-Jie Li
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Duration of Response (DOR) ,Minimal residual disease (MRD) ,Multiple myeloma (MM) ,Serum free light chain ratio (sFLCR) ,Stringent complete response (sCR) ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Multiple myeloma (MM) denotes a cancerous growth characterized by abnormal proliferation of plasma cells. Growing evidence suggests that the complexity in addressing MM lies in the presence of minimal residual disease (MRD) within the body. MRD assessment is becoming increasingly important for risk assessment in patients with MM. Similarly, the levels of serum free protein light chain and their ratio play a crucial role in assessing the disease burden and changes in MM. In this paper, we review and explore the utilization of MRD and serum free light chain ratio in the treatment of MM, delving into their respective characteristics, advantages, disadvantages, and their interrelation.
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- 2024
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41. PCYT1A deficiency disturbs fatty acid metabolism and induces ferroptosis in the mouse retina
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Kaifang Wang, Huijuan Xu, Rong Zou, Guangqun Zeng, Ye Yuan, Xianjun Zhu, Xiaohui Zhao, Jie Li, and Lin Zhang
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IRDs ,PCYT1A ,Fatty acid metabolism ,Ferroptosis ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Inherited retinal dystrophies (IRDs) are a group of debilitating visual disorders characterized by the progressive degeneration of photoreceptors, which ultimately lead to blindness. Among the causes of this condition, mutations in the PCYT1A gene, which encodes the rate-limiting enzyme responsible for phosphatidylcholine (PC) de novo synthesis via the Kennedy pathway, have been identified. However, the precise mechanisms underlying the association between PCYT1A mutations and IRDs remain unclear. To address this knowledge gap, we focused on elucidating the functions of PCYT1A in the retina. Results We found that PCYT1A is highly expressed in Müller glial (MG) cells in the inner nuclear layer (INL) of the retina. Subsequently, we generated a retina-specific knockout mouse model in which the Pcyt1a gene was targeted (Pcyt1a-RKO or RKO mice) to investigate the molecular mechanisms underlying IRDs caused by PCYT1A mutations. Our findings revealed that the deletion of Pcyt1a resulted in retinal degenerative phenotypes, including reduced scotopic electroretinogram (ERG) responses and progressive degeneration of photoreceptor cells, accompanied by loss of cells in the INL. Furthermore, through proteomic and bioinformatic analyses, we identified dysregulated retinal fatty acid metabolism and activation of the ferroptosis signalling pathway in RKO mice. Importantly, we found that PCYT1A deficiency did not lead to an overall reduction in PC synthesis within the retina. Instead, this deficiency appeared to disrupt free fatty acid metabolism and ultimately trigger ferroptosis. Conclusions This study reveals a novel mechanism by which mutations in PCYT1A contribute to the development of IRDs, shedding light on the interplay between fatty acid metabolism and retinal degenerative diseases, and provides new insights into the treatment of IRDs.
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- 2024
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42. Lower HBV DNA level is associated with more severe liver fibrosis in HBeAg-positive chronic hepatitis B with normal alanine transaminase
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Jian Wang, Li Zhu, Zhiyi Zhang, Shaoqiu Zhang, Yifan Pan, Yuanyuan Li, Fei Cao, Chao Jiang, Tao Fan, Ye Xiong, Jiacheng Liu, Yuxin Chen, Shengxia Yin, Xin Tong, Chuanwu Zhu, Xingxiang Liu, Jie Li, Chao Wu, and Rui Huang
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Chronic hepatitis B ,Immune-tolerant ,HBV DNA ,Liver fibrosis ,Cirrhosis ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background The association of hepatitis B virus (HBV) DNA levels and liver fibrosis in chronic hepatitis B (CHB) patients with immune-tolerant phase remains unclear. We explored the association between liver fibrosis and HBV DNA levels in HBeAg-positive CHB patients with normal alanine transaminase (ALT) with relatively high HBV DNA. Methods Six hundred and twenty-two HBeAg-positive CHB patients with normal ALT were included. Patients were divided into three categories: low (6 log10 IU/mL ≤ HBV DNA
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- 2024
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43. Research on dust control technology and numerical simulation of conical guiding air curtain in fully mechanized excavation face
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Xin Meng, Qiqiang Gao, Jie Li, and Guoan Zhao
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Excavation working face ,Dust ,CDAC device ,Guiding wind curtain ,Dust control effect ,Medicine ,Science - Abstract
Abstract The dust pollution caused by the operation of fully mechanized heading face poses a serious threat to the safety production of operators and working face. To reduce dust concentration at the fully mechanized heading face, this study analyzed dust samples collected from various positions to understand the particle size distribution characteristics. Based on these findings, a conical diversion air conditioning (CDAC) device was designed to create a radial air curtain for dust control in the roadway cross-section. Computational Fluid Dynamics (CFD) was then employed to investigate the airflow and particle dynamics when the cone-shaped deflector was in closed and open states. The results show that in the fully mechanized heading face, the dust distribution in the working area of the roadheader driver is relatively dense, and the dust particles with particle size ≤ 8 μm account for a large proportion. When the CDAC device is deployed, the axial airflow in the roadway is changed into a rotating airflow along the roadway wall, and an air screen is established in the working area of the roadheader driver to block the outward diffusion of dust. When the pressure air outlet is arranged 30 m away from the tunneling head, the pressure air volume is set to 400 m3/min, and the CDAC device can better form the air curtain barrier to block the dust particles. It provides a new method for effectively controlling the dust concentration of the fully mechanized heading face and directly ensuring the health of the roadheader driver.
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- 2024
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44. Alseodaphnopsis maguanensis is conspecific with A. hokouensis (Lauraceae) based on morphological and molecular evidence
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Lang Li, Dian-Yang Zou, Ya-Meng Mao, and Jie Li
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Botany ,QK1-989 - Abstract
Based on both morphological and molecular evidence, it is confirmed that Alseodaphnopsis maguanensis is conspecific with A. hokouensis. Hence, Alseodaphnopsis maguanensis is treated as a synonym of A. hokouensis here. The conservation status of Alseodaphnopsis hokouensis is also re-evaluated according to the IUCN Red List Categories and Criteria in this study.
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- 2024
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45. Procyanidin C1 inhibits tumor growth and metastasis in colon cancer via modulating miR-501-3p/HIGD1A axis
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Jun-lin Lv, Yu-jun Tan, Yu-shan Ren, Ru Ma, Xiao Wang, Shu-yan Wang, Wan-qing Liu, Qiu-sheng Zheng, Jing-chun Yao, Jun Tian, and Jie Li
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COADREAD ,HIGD1A ,miR-501-3p ,Tumor growth ,Metastasis ,Procyanidin C1 ,Medicine (General) ,R5-920 ,Science (General) ,Q1-390 - Abstract
Introduction: Although colon (COAD) and rectal adenocarcinoma (READ) combined to refer to colorectal cancer (CRC), substantial clinical evidence urged that CRC should be treated as two different cancers due to compared with READ, COAD showed higher morbidity and worse 5-year survival. Objectives: This study has tried to screen for the crucial gene that caused the worse prognosis and investigate its mechanism for mediating tumor growth and metastases in COAD. Meanwhile, the potential anti-COAD compound implicated in this mechanism was identified and testified from 1,855 food-borne chemical kits. This study aims to bring a new perspective to the development of new anti-COAD drugs and personalized medicine for patients with COAD. Methods and results: The survival-related hub genes in COAD and READ were screened out from The Cancer Genome Atlas (TCGA) database and the results showed that HIGD1A, lower expressed in COAD than in READ, was associated with poor prognosis in COAD patients, but not in READ. Over-expressed HIGD1A suppressed CRC cell proliferation, invasion, and migration in vitro and in vivo. Meanwhile, the different expressed microRNA profiles between COAD and READ showed that miR-501-3p was highly expressed in COAD and inhibited HIGD1A expression by targeting 3′UTR of HIGD1A. MiR-501-3p mimics promoted cell proliferation and metastasis in CRC cells. In addition, Procyanidin C1 (PCC1), a kind of natural polyphenol has been verified as a potential miR-501-3p inhibitor. In vitro and in vivo, PCC1 promoted HIGD1A expression by suppressing miR-501-3p and resulted in inhibited tumor growth and metastasis. Conclusion: The present study verified that miR-501-3p/HIGD1A axis mediated tumor growth and metastasis in COAD. PCC1, a flavonoid that riched in food exerts anti-COAD effects by inhibiting miR-501-3p and results in the latter losing the ability to suppress HIGD1A expression. Subsequently, unfettered HIGD1A inhibited tumor growth and metastasis in COAD.
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- 2024
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46. Laboratory-developed Droplet Digital PCR Assay for Quantification of the JAK2V617F Mutation
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Yupeng Liu, Cong Han, Jie Li, Shicai Xu, Zhijian Xiao, Zhiyun Guo, Shuquan Rao, and Yao Yao
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myeloproliferative neoplasms ,JAK2 V617F mutation ,ddPCR ,optimization ,Genetics ,QH426-470 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Precise quantification of the JAK2V617F mutation using highly sensitive assays is crucial for diagnosis, treatment process monitoring, and prognostic prediction in myeloproliferative neoplasms' (MPNs) patients. Digital droplet polymerase chain reaction (ddPCR) enables precise quantification of low-level mutations amidst a high percentage of wild type alleles without the need for external calibrators or endogenous controls. The objective of this study was to optimize a ddPCR assay for detecting the JAK2V617F mutation and establish it as a laboratory-developed ddPCR assay in our center. The optimization process involved fine-tuning five key parameters: primer/probe sequences and concentrations, annealing temperature, template amount, and PCR cycles. Our ddPCR assay demonstrated exceptional sensitivity, and the limit of quantification (LoQ) was 0.01% variant allele frequency with a coefficient of variation of approximately 76%. A comparative analysis with quantitative PCR on 39 samples showed excellent consistency (r = 0.988).
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- 2024
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47. Association between irritable bowel syndrome and Parkinson’s disease by Cohort study and Mendelian randomization analysis
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Zhi-yun Wang, Dong-rui Ma, Meng-jie Li, Yuan-yuan Liang, Zheng-wei Hu, Shuang-jie Li, Chun-yan Zuo, Chen-wei Hao, Yan-mei Feng, Meng-nan Guo, Xiao-yan Hao, Yuan-li Guo, Ke-ke Ma, Li-na Guo, Chan Zhang, Yu-ming Xu, Cheng-yuan Mao, and Chang-he Shi
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Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract This study aimed to investigate the association between irritable bowel syndrome (IBS) and Parkinson’s disease (PD) utilizing prospective cohort study and Mendelian randomization. The dataset contained a substantial cohort of 426,911 participants from the UK Biobank, discussing the association between IBS and PD with Cox proportional hazards models and case-control analysis while adjusting for covariates such as age, gender, ethnicity and education level. In univariate Cox regression model, the risk of PD was reduced in IBS patients (HR: 0.774, 95%CI: 0.625–0.956, P = 0.017), but the statistical significance diminished in the three models after adjusting for other variables. In a few subgroup analyses, IBS patients are less likely to develop into PD, and patients diagnosed with IBS after 2000 also had a lower risk (HR: 0.633, 95%CI: 0.403–0.994, P = 0.047) of subsequently developing PD. In addition, we matched five healthy control participants based on gender and age at the end of the study for each IBS patient diagnosed during the follow-up period, and logistic regression results (OR:1.239, 95%CI: 0.896–1.680, P = 0.181) showed that IBS was not associated with the risk of PD. Mendelian randomization did not find significant evidence of the causal relationship between IBS and Parkinson’s disease (OR: 0.801, 95%CI: 0.570–1.278, P = 0.204). Overall, we suggest that IBS status is not associated with the risk of developing PD, and that these findings provide valuable insights into the clinical management and resource allocation of patients with IBS.
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- 2024
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48. The potential protective role of peripheral immunophenotypes in Alzheimer’s disease: a Mendelian randomization study
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Chun-yan Zuo, Zhengwei Hu, Xiao-yan Hao, Meng-jie Li, Jing-jing Shi, Meng-nan Guo, Dong-rui Ma, Shuang-jie Li, Yuan-yuan Liang, Chan Zhang, Cheng-yuan Mao, Yuming Xu, and Chang-he Shi
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peripheral immunity ,peripheral blood immune cell phenotype ,Alzheimer’s disease ,Mendelian randomization ,protective factor ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
IntroductionAlzheimer’s disease (AD) is the most widespread neurodegenerative disease in the world. Previous studies have shown that peripheral immune dysregulation plays a paramount role in AD, but whether there is a protective causal relationship between peripheral immunophenotypes and AD risk remains ambiguous.MethodsTwo-sample Mendelian randomization (MR) was performed using large genome-wide association study (GWAS) genetic data to assess causal effects between peripheral immunophenotypes and AD risk. Utilizing the genetic associations of 731 immune cell traits as exposures. We adopted the inverse variance weighted method as the primary approach. The Weighted median and MR-Egger regression methods were employed as supplements. Various sensitivity analyses were performed to assess the robustness of the outcomes.ResultsBased on the IVW method, we identified 14 immune cell traits that significantly reduced the risk of AD, of which six demonstrated statistical significance in both IVW and Weighted median methods. Among the seven immune traits, four were related to regulatory T (Treg) cells : (1) CD25++ CD45RA- CD4 not regulatory T cell % T cell (odds ratio (OR) [95% confidence interval (CI)] = 0.96 [0.95, 0.98], adjusted P = 1.17E−02), (2) CD25++ CD45RA- CD4 not regulatory T cell % CD4+ T cell (OR [95% CI] = 0.97 [0.96, 0.99], adjusted P = 3.77E−02), (3) Secreting CD4 regulatory T cell % CD4 regulatory T cell (OR [95% CI] = 0.98 [0.97, 0.99], adjusted P = 7.10E−03), (4) Activated & secreting CD4 regulatory T cell % CD4 regulatory T cell(OR [95% CI] = 0.98 [0.97, 0.99], adjusted P = 7.10E−03). In addition, HLA DR++ monocyte % monocyte (OR [95% CI] = 0.93 [0.89, 0.98], adjusted P = 4.87E−02) was associated with monocytes, and HLA DR on myeloid Dendritic Cell (OR [95% CI] = 0.93 [0.89, 0.97], adjusted P = 1.17E−02) was related to dendritic cells (DCs).ConclusionThese findings enhance the comprehension of the protective role of peripheral immunity in AD and provide further support for Treg and monocyte as potential targets for immunotherapy in AD.
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- 2024
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49. Efficacy and safety of bilastine vs. levocetirizine for the treatment of chronic idiopathic urticaria: A multicenter, double-blind, double-dummy, phase III, non-inferiority, randomized clinical trial
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Xue Chen, Xiuping Han, Bo Cheng, Hui Li, Lingling Liu, Songmei Geng, Linfeng Li, Jie Li, Qing Guo, Guoyi Zhang, Hong Fang, Jianzhong Zhang, and Lishao Guo
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Medicine - Published
- 2024
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50. Cuproptosis: A potential therapeutic target in clear cell renal cell carcinoma
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Yuetong Zhao, Jie Li, Xiaojie Lu, Shuang Wu, Yunze Xing, Yaxuan Fang, Bo Yang, and Xiangxiang Pan
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Medicine - Published
- 2024
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