108 results on '"Johnson DT"'
Search Results
2. Does the Death Penalty Deter Homicide in Japan?
- Author
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Johnson, DT and Johnson, DT
- Abstract
Unlike the United States, where death penalty and deterrence studies are legion, there has been little research about the death penalty and deterrence in Japan, though the paucity of studies has not discouraged citizens and officials from making confident claims about this issue. Indeed, deterrence has been called “the core of argumentation for and against” the death penalty in Japan. Serious research on this subject has been all but impossible because of difficulties obtaining decent crime data from the Japanese government. This paper uses monthly homicide and robbery-homicide statistics that were previously unavailable to examine whether death sentences and executions in Japan deterred these crimes from 1990 to 2010. The main finding is that the death penalty did not deter homicide or robbery-homicide during this period. More research is needed on this subject, but at present the Japanese government has no sound basis for continuing to claim that the country needs to retain the death penalty because it deters heinous crime.
- Published
- 2017
3. Understanding and Improving Data Quality Relating to Low-Income Households
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JOHNSON, DT, SCUTELLA, R, JOHNSON, DT, and SCUTELLA, R
- Published
- 2003
4. Measuring the local impact of electronic gaming machines
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JOHNSON, DT and JOHNSON, DT
- Published
- 2002
5. Riding on the waves.
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Johnson DT
- Published
- 2001
6. Targeted drug delivery via intrathecal pain pump for the treatment of malignant pain.
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Zlotchenko DG, Johnson DT, and Kelson K
- Subjects
- Humans, Pain Measurement, Radiography, Interventional, Treatment Outcome, Analgesics, Opioid administration & dosage, Analgesics, Opioid adverse effects, Cancer Pain diagnosis, Cancer Pain drug therapy, Infusion Pumps, Implantable adverse effects, Injections, Spinal adverse effects, Injections, Spinal instrumentation
- Abstract
Cancer patients experience pain at significant rates but are often undertreated-it is estimated that less than 1% of eligible cancer pain patients receive appropriate targeted drug delivery to address their pain. Cancer pain is often managed with systemic opioid treatment; however, this approach is limited in treating pain adequately and carries significant side effect risk profiles. Successful treatment of pain is closely tied to better oncologic outcomes as well as better measures on assessments of quality of life for cancer patients. Placement of intrathecal pain pumps represent a safe and effective way to manage pain in cancer patients. We describe the process of placing intrathecal pain pumps in an interventional radiology suite. This method of pump placement represents a minimally invasive approach to long term and continuous pain relief. Intrathecal pain pumps help maximize pain control for patients experiencing refractory pain due to disease process or treatments associated with malignancy., Competing Interests: Disclosure I am on faculty for Medtronic pain therapies. I am on the advisory for TerSera that manufactures Prialt., (Published by Elsevier Inc.)
- Published
- 2024
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7. Treatment of locally advanced pancreatic cancer using localized trans-arterial micro perfusion of gemcitabine: combined analysis of RR1 and RR2.
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Hatoum H, Rosemurgy A 2nd, Bastidas JA, Zervos E, Muscarella P 2nd, Edil BH, Cynamon J, Johnson DT, Thomas C, Swinson BM, Nordgren A, Vitulli P, Nutting C, Gipson M, Tsobanoudis A, and Agah R
- Subjects
- Humans, Middle Aged, Aged, Female, Male, Aged, 80 and over, Antimetabolites, Antineoplastic therapeutic use, Antimetabolites, Antineoplastic administration & dosage, Antimetabolites, Antineoplastic adverse effects, Adenocarcinoma drug therapy, Adenocarcinoma pathology, Deoxycytidine analogs & derivatives, Deoxycytidine administration & dosage, Deoxycytidine therapeutic use, Deoxycytidine adverse effects, Gemcitabine, Pancreatic Neoplasms drug therapy, Pancreatic Neoplasms pathology
- Abstract
Background: Locally advanced pancreatic cancer (LAPC) comprises 40% of pancreatic cancer diagnoses and has a relatively poor prognosis. Trans-arterial micro perfusion (TAMP)-mediated chemotherapy delivery to the primary tumor is a novel approach worthy of investigation. The RR1 (dose escalation) and RR2 (observational) studies examined the safety and preliminary efficacy of TAMP-delivered gemcitabine for LAPC., Patients and Methods: RR1 and RR2 data were pooled. Both studies enrolled patients with LAPC with histologically confirmed adenocarcinoma. Participant data, including age, sex, race, stage, previous treatments, toxicity, disease progression, and death, were collected. Median number of cycles and average treatment dosage were calculated. Overall survival (OS) was determined for the whole group and separately for patients who received and did not receive previous treatments. Aims of the analysis were to assess procedure safety, OS, and evaluate factors associated with OS., Results: The median age of the 43 patients enrolled in RR1 and RR2 was 72 years (range, 51-88 years). Median OS for the 35 eligible patients with stage III disease was 12.6 months (95% CI, 2.1-54.2 months). Previous chemoradiation was associated with significantly longer OS [27.1 months (95% CI, 8.4-40.6 months)] compared to previous systemic chemotherapy [14.6 months (95% CI, 6.4-54.2 months)] or no prior treatment [7.0 months (95% CI, 2.1-35.4 months)] (P < .001). The most common adverse events were GI related (abdominal pain, emesis, and vomiting); the most common grade 3 toxicity was sepsis., Conclusion: Study results indicate that TAMP-mediated gemcitabine delivery in patients with LAPC is potentially safe, feasible, and provides potential clinical benefits., Clinical Trial Registration: NCT02237157 (RR1) and NCT02591082 (RR2)., (© The Author(s) 2024. Published by Oxford University Press.)
- Published
- 2024
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8. Society of Interventional Radiology Position Statement on Endovascular Trauma Intervention in the Pediatric Population.
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Annam A, Alexander ES, Cahill AM, Foley D, Green J, Himes EA, Johnson DT, Josephs S, Kulungowski AM, Leonard JC, Nance ML, Patel S, Pezeshkmehr A, and Riggle K
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- Humans, Child, Consensus, Treatment Outcome, Vascular System Injuries diagnostic imaging, Vascular System Injuries therapy, Vascular System Injuries etiology, Adolescent, Child, Preschool, Age Factors, Infant, Risk Factors, Endovascular Procedures standards, Endovascular Procedures adverse effects, Radiography, Interventional standards
- Published
- 2024
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9. Development of a novel five dye insertion/deletion (INDEL) panel for ancestry determination.
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Avellaneda LL, Johnson DT, Gutierrez RM, Thompson L, Sturm SA, Sage KA, Houston RM, and LaRue BL
- Subjects
- Humans, Bayes Theorem, DNA Fingerprinting methods, Gene Frequency, Genetic Markers, Genetics, Population, Genotype, Microsatellite Repeats, United States, Electrophoresis, Capillary, INDEL Mutation, Principal Component Analysis, Racial Groups genetics
- Abstract
The use of genetic markers, specifically Short Tandem Repeats (STRs), has been a valuable tool for identifying persons of interest. However, the ability to analyze additional markers including Single Nucleotide Polymorphisms (SNPs) and Insertion/Deletion (INDELs) polymorphisms allows laboratories to explore other investigative leads. INDELs were chosen in this study because large panels can be differentiated by size, allowing them to be genotyped by capillary electrophoresis. Moreover, these markers do not produce stutter and are smaller in size than STRs, facilitating the recovery of genetic information from degraded samples. The INDEL Ancestry Informative Markers (AIMs) in this study were selected from the 1000 Genomes Project based on a fixation index (F
ST ) greater than 0.50, high allele frequency divergence, and genetic distance. A total of 25 INDEL-AIMs were optimized and validated according to SWGDAM guidelines in a five-dye multiplex. To validate the panel, genotyping was performed on 155 unrelated individuals from four ancestral groups (Caucasian, African, Hispanic, and East Asian). Bayesian clustering and principal component analysis (PCA) were performed revealing clear separation among three groups, with some observed overlap within the Hispanic group. Additionally, the PCA results were compared against a training set of 793 samples from the 1000 Genomes Project, demonstrating consistent results. Validation studies showed the assay to be reproducible, tolerant to common inhibitors, robust with challenging casework type samples, and sensitive down to 125 pg. In conclusion, our results demonstrated the robustness and effectiveness of a 25 loci INDEL system for ancestry inference of four ancestries commonly found in the United States., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2024
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10. Development of a novel five-dye panel for human identification insertion/deletion (INDEL) polymorphisms.
- Author
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Avellaneda LL, Johnson DT, Gutierrez R, Thompson L, Sage KA, Sturm SA, Houston RM, and LaRue BL
- Subjects
- Humans, Reproducibility of Results, Genetic Markers, Genotype, Fluorescent Dyes, Polymerase Chain Reaction, Polymorphism, Genetic, Electrophoresis, Capillary, Microsatellite Repeats, INDEL Mutation, DNA Fingerprinting methods, Gene Frequency
- Abstract
DNA analysis of forensic case samples relies on short tandem repeats (STRs), a key component of the combined DNA index system (CODIS) used to identify individuals. However, limitations arise when dealing with challenging samples, prompting the exploration of alternative markers such as single nucleotide polymorphisms (SNPs) and insertion/deletion (INDELs) polymorphisms. Unlike SNPs, INDELs can be differentiated easily by size, making them compatible with electrophoresis methods. It is possible to design small INDEL amplicons (<200 bp) to enhance recovery from degraded samples. To this end, a set of INDEL Human Identification Markers (HID) was curated from the 1000 Genomes Project, employing criteria including a fixation index (F
ST ) ≤ 0.06, minor allele frequency (MAF) >0.2, and high allele frequency divergence. A panel of 33 INDEL-HIDs was optimized and validated following the Scientific Working Group on DNA Analysis Methods (SWGDAM) guidelines, utilizing a five-dye multiplex electrophoresis system. A small sample set (n = 79 unrelated individuals) was genotyped to assess the assay's performance. The validation studies exhibited reproducibility, inhibition tolerance, ability to detect a two-person mixture from a 4:1 to 1:6 ratio, robustness with challenging samples, and sensitivity down to 125 pg of DNA. In summary, the 33-loci INDEL-HID panel exhibited robust recovery with low-template and degraded samples and proved effective for individualization within a small sample set., (© 2024 American Academy of Forensic Sciences.)- Published
- 2024
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11. Use of a Pressure Wire for Automatically Correcting Artifacts in Phasic Pressure Tracings From a Fluid-Filled Catheter.
- Author
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Johnson DT, Svanerud J, Ahn JM, Bezerra HG, Collison D, van 't Veer M, Hennigan B, De Bruyne B, Kirkeeide RL, Gould KL, and Johnson NP
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- Humans, Artifacts, Retrospective Studies, Catheters, Fractional Flow Reserve, Myocardial
- Abstract
Background/purpose: Matching phasic pressure tracings between a fluid-filled catheter and high-fidelity pressure wire has received limited attention, although each part contributes half of the information to clinical decisions. We aimed to study the impact of a novel and automated method for improving the phasic calibration of a fluid-filled catheter by accounting for its oscillatory behavior., Methods/materials: Retrospective analysis of drift check tracings was performed using our algorithm that corrects for mean difference (offset), temporal delays (timing), differential sensitivity of the manifold transducer and pressure wire sensor (gain), and the oscillatory behavior of the fluid-filled catheter described by its resonant frequency and damping factor (how quickly oscillations disappear after a change in pressure)., Results: Among 2886 cases, correcting for oscillations showed a large improvement in 28 % and a medium improvement in 41 % (decrease in root mean square error >0.5 mmHg to <1 or 1-2 mmHg, respectively). 96 % of oscillators were underdamped with median damping factor 0.27 and frequency 10.6 Hz. Fractional flow reserve or baseline Pd/Pa demonstrated no clinically important bias when ignoring oscillations. However, uncorrected subcycle non-hyperemic pressure ratios (NHPR) displayed both bias and scatter., Conclusions: By automatically accounting for the oscillatory behavior of a fluid-filled catheter system, phasic matching against a high-fidelity pressure wire can be improved compared to standard equalization methods. The majority of tracings contain artifacts, mainly due to underdamped oscillations, and neglecting them leads to biased estimates of equalization parameters. No clinically important bias exists for whole-cycle metrics, in contrast to significant effects on subcycle NHPR., (Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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12. Balloon-Augmented Hydrodissection to Permit Cryoablation of a Mediastinal Lymph Node.
- Author
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Gayed A, Leaphart N, Gurusamy V, and Johnson DT
- Subjects
- Humans, Lymph Nodes diagnostic imaging, Lymph Nodes surgery, Lymph Nodes pathology, Lymphatic Metastasis pathology, Mediastinum diagnostic imaging, Cryosurgery adverse effects, Catheter Ablation
- Published
- 2022
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13. A Review of Transsplenic Access for Portal Vein Interventions.
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Gayed A, Bridges PH, and Johnson DT
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- 2022
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14. Hydroxyl radical protein footprinting for analysis of higher order structure.
- Author
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Johnson DT and Jones LM
- Subjects
- Mass Spectrometry, Hydroxyl Radical chemistry, Protein Footprinting
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- 2022
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15. Envelope Stress Activates Expression of the Twin Arginine Translocation (Tat) System in Salmonella.
- Author
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Rogers AR, Turner EE, Johnson DT, and Ellermeier JR
- Subjects
- Peptidoglycan metabolism, Salmonella typhimurium metabolism, Heat-Shock Proteins metabolism, Arginine metabolism, Bile Acids and Salts metabolism, Bacterial Proteins metabolism, Twin-Arginine-Translocation System genetics, Twin-Arginine-Translocation System metabolism, Escherichia coli Proteins metabolism
- Abstract
The twin arginine translocation system (Tat) is a protein export system that is conserved in bacteria, archaea, and plants. In Gram-negative bacteria, it is required for the export of folded proteins from the cytoplasm to the periplasm. In Salmonella, there are 30 proteins that are predicted substrates of Tat, and among these are enzymes required for anaerobic respiration and peptidoglycan remodeling. We have demonstrated that some conditions that induce bacterial envelope stress activate expression of a Δ tatABC-lacZ fusion in Salmonella enterica serovar Typhimurium. Particularly, the addition of bile salts to the growth medium causes a 3-fold induction of a Δ tatABC-lacZ reporter fusion. Our data demonstrate that this induction is mediated via the phage shock protein (Psp) stress response system protein PspA. Further, we show that deletion of tatABC increases the induction of tatABC expression in bile salts. Indeed, the data suggest significant interaction between PspA and the Tat system in the regulatory response to bile salts. Although we have not identified the precise mechanism of Psp regulation of tatABC , our work shows that PspA is involved in the activation of tatABC expression by bile salts and adds another layer of complexity to the Salmonella response to envelope stress. IMPORTANCE Salmonella species cause an array of diseases in a variety of hosts. This research is significant in showing induction of the Tat system as a defense against periplasmic stress. Understanding the underlying mechanism of this regulation broadens our understanding of the Salmonella stress response, which is critical to the ability of the organism to cause infection.
- Published
- 2022
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16. Acute myeloid leukemia cell membrane-coated nanoparticles for cancer vaccination immunotherapy.
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Johnson DT, Zhou J, Kroll AV, Fang RH, Yan M, Xiao C, Chen X, Kline J, Zhang L, and Zhang DE
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- Animals, Antigen Presentation, Cell Membrane, Humans, Immunotherapy, Mice, Vaccination, Cancer Vaccines, Leukemia, Myeloid, Acute drug therapy, Nanoparticles
- Abstract
Cancer vaccines are promising treatments to prevent relapse after chemotherapy in acute myeloid leukemia (AML) patients, particularly for those who cannot tolerate intensive consolidation therapies. Here, we report the development of an AML cell membrane-coated nanoparticle (AMCNP) vaccine platform, in which immune-stimulatory adjuvant-loaded nanoparticles are coated with leukemic cell membrane material. This AMCNP vaccination strategy stimulates leukemia-specific immune responses by co-delivering membrane-associated antigens along with adjuvants to antigen-presenting cells. To demonstrate that this AMCNP vaccine enhances leukemia-specific antigen presentation and T cell responses, we modified a murine AML cell line to express membrane-bound chicken ovalbumin as a model antigen. AMCNPs were efficiently acquired by antigen-presenting cells in vitro and in vivo and stimulated antigen cross-presentation. Vaccination with AMCNPs significantly enhanced antigen-specific T cell expansion and effector function compared with control vaccines. Prophylactic vaccination with AMCNPs enhanced cellular immunity and protected against AML challenge. Moreover, in an AML post-remission vaccination model, AMCNP vaccination significantly enhanced survival in comparison to vaccination with whole leukemia cell lysates. Collectively, AMCNPs retained AML-specific antigens, elicited enhanced antigen-specific immune responses, and provided therapeutic benefit against AML challenge., (© 2021. The Author(s).)
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- 2022
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17. Alternative polyadenylation dysregulation contributes to the differentiation block of acute myeloid leukemia.
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Davis AG, Johnson DT, Zheng D, Wang R, Jayne ND, Liu M, Shin J, Wang L, Stoner SA, Zhou JH, Ball ED, Tian B, and Zhang DE
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- 3' Untranslated Regions, Cells, Cultured, Hematopoietic Stem Cells metabolism, Humans, Tumor Cells, Cultured, mRNA Cleavage and Polyadenylation Factors genetics, Gene Expression Regulation, Leukemic, Leukemia, Myeloid, Acute genetics, Polyadenylation
- Abstract
Posttranscriptional regulation has emerged as a driver for leukemia development and an avenue for therapeutic targeting. Among posttranscriptional processes, alternative polyadenylation (APA) is globally dysregulated across cancer types. However, limited studies have focused on the prevalence and role of APA in myeloid leukemia. Furthermore, it is poorly understood how altered poly(A) site usage of individual genes contributes to malignancy or whether targeting global APA patterns might alter oncogenic potential. In this study, we examined global APA dysregulation in patients with acute myeloid leukemia (AML) by performing 3' region extraction and deep sequencing (3'READS) on a subset of AML patient samples along with healthy hematopoietic stem and progenitor cells (HSPCs) and by analyzing publicly available data from a broad AML patient cohort. We show that patient cells exhibit global 3' untranslated region (UTR) shortening and coding sequence lengthening due to differences in poly(A) site (PAS) usage. Among APA regulators, expression of FIP1L1, one of the core cleavage and polyadenylation factors, correlated with the degree of APA dysregulation in our 3'READS data set. Targeting global APA by FIP1L1 knockdown reversed the global trends seen in patients. Importantly, FIP1L1 knockdown induced differentiation of t(8;21) cells by promoting 3'UTR lengthening and downregulation of the fusion oncoprotein AML1-ETO. In non-t(8;21) cells, FIP1L1 knockdown also promoted differentiation by attenuating mechanistic target of rapamycin complex 1 (mTORC1) signaling and reducing MYC protein levels. Our study provides mechanistic insights into the role of APA in AML pathogenesis and indicates that targeting global APA patterns can overcome the differentiation block in patients with AML., (© 2022 by The American Society of Hematology.)
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- 2022
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18. Evaluating the Sulfate Radical Anion as a New Reagent for In-Cell Fast Photochemical Oxidation of Proteins.
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McKenzie-Coe AA, Johnson DT, Peacock RB, Zhang Z, and Jones LM
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- HEK293 Cells, Humans, Oxidants, Photochemical, Oxidation-Reduction, Protein Footprinting methods, Sodium Compounds chemistry, Indicators and Reagents chemistry, Proteins analysis, Proteins chemistry, Sulfates chemistry
- Abstract
Fast photochemical oxidation of proteins (FPOP) has demonstrated the ability to inform on the higher order structure of proteins. Recent technological advances have extended FPOP to live cells (IC-FPOP) using multiple cell lines and in vivo (IV-FPOP) using C. elegans . These innovations allow proteins to be studied in their native cellular environment. Hydroxyl radicals are generated via the photoloysis of hydrogen peroxide. Hydrogen peroxide is a signaling molecule that can induce changes to some proteins in the cell limiting the proteins that can be studied by IC-FPOP. Here, we evaluate the sulfate radical anion as a footprinting label in IC-FPOP with sodium persulfate as the precursor. Our findings show a 1.5-fold increase in the number of modified proteins compared to IC-FPOP using hydroxyl radicals at the same precursor concentration demonstrating the amenability of this radical with IC-FPOP.
- Published
- 2021
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19. Deep learning for prediction of fractional flow reserve from resting coronary pressure curves.
- Author
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Zimmermann FM, Mast TP, Johnson NP, Everts I, Hennigan B, Berry C, Johnson DT, De Bruyne B, Fearon WF, Oldroyd K, Pijls NHJ, Tonino PAL, and van 't Veer M
- Subjects
- Artificial Intelligence, Cardiac Catheterization, Coronary Angiography, Coronary Vessels diagnostic imaging, Humans, Predictive Value of Tests, Reproducibility of Results, Severity of Illness Index, Coronary Stenosis diagnosis, Deep Learning, Fractional Flow Reserve, Myocardial
- Abstract
Background: It would be ideal for a non-hyperaemic index to predict fractional flow reserve (FFR) more accurately, given FFR's extensive validation in a multitude of clinical settings., Aims: The aim of this study was to derive a novel non-hyperaemic algorithm based on deep learning and to validate it in an internal validation cohort against FFR., Methods: The ARTIST study is a post hoc analysis of three previously published studies. In a derivation cohort (random 80% sample of the total cohort) a deep neural network was trained (deep learning) with paired examples of resting coronary pressure curves and their FFR values. The resulting algorithm was validated against unseen resting pressure curves from a random 20% sample of the total cohort. The primary endpoint was diagnostic accuracy of the deep learning-derived algorithms against binary FFR ≤0.8. To reduce the variance in the precision, we used a fivefold cross-validation procedure., Results: A total of 1,666 patients with 1,718 coronary lesions and 2,928 coronary pressure tracings were included. The diagnostic accuracy of our convolutional neural network (CNN) and recurrent neural networks (RNN) against binary FFR ≤0.80 was 79.6±1.9% and 77.6±2.3%, respectively. There was no statistically significant difference between the accuracy of our neural networks to predict binary FFR and the most accurate non-hyperaemic pressure ratio (NHPR)., Conclusions: Compared to standard derivation of resting pressure ratios, we did not find a significant improvement in FFR prediction when resting data are analysed using artificial intelligence approaches. Our findings strongly suggest that a larger class of hidden information within resting pressure traces is not the main cause of the known disagreement between resting indices and FFR. Therefore, if clinicians want to use FFR for clinical decision making, hyperaemia induction should remain the standard practice.
- Published
- 2021
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20. Improving Cone-Beam CT Angiography for Prostatic Artery Embolization: Is a Low-Dose Protocol Equivalent to the Standard?
- Author
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Uflacker A, Haskal ZJ, Patrie J, Smith A, Tramel R, Irish N, Ashley B, Johnson DT, and Yamada R
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- Aged, Aged, 80 and over, Humans, Lower Urinary Tract Symptoms diagnostic imaging, Male, Middle Aged, Predictive Value of Tests, Prospective Studies, Prostatic Hyperplasia diagnostic imaging, Radiation Exposure adverse effects, Time Factors, Treatment Outcome, Arteries diagnostic imaging, Computed Tomography Angiography adverse effects, Cone-Beam Computed Tomography adverse effects, Embolization, Therapeutic adverse effects, Lower Urinary Tract Symptoms therapy, Prostate blood supply, Prostatic Hyperplasia therapy, Radiation Dosage, Radiation Exposure prevention & control
- Abstract
Purpose: To compare the utility of low-dose versus standard cone-beam computed tomography (CT) angiography protocols in identifying nontarget embolization (NTE) during prostatic artery embolization (PAE)., Materials and Methods: A prospective, single-center, Phase-1 study (NCT02592473) was conducted for lower urinary tract symptoms in benign prostatic hyperplasia. Prostate volume, international prostate symptom score (IPSS), quality of life score (QoL), International Index of Erectile Function (IIEF), peak flow rate, UCLA Prostate Cancer Index (UCLA-PCI), and postvoid residual were recorded at baseline and 1, 3, 6, 12, and 24-months after PAE. Six-second (standard protocol, n = 29) or 5-second (low-dose protocol n = 45) rotations were made. Images were selected and matched in pairs by areas of NTE and compared by readers using a binomial generalized estimating equation model. Procedural outcomes were analyzed using a linear mixed model., Results: Seventy-four cone-beam CT angiographies were performed in 21 patients. IPSS and QoL scores significantly improved (P <.05). There was no change in UCLA-PCI or IIEF scores. Dose area product of the low- and standard-dose protocol were 37,340.82 mGy·cm
2 ± 104.66 and 62,645.66 mGy·cm2 ± 12,711.48, respectively, representing a dose reduction of 40.4%. A total of 120 comparisons showed no preference between the 2 protocols (P =.24). Observers identified 76 and 69 instances of NTE in the standard- and low-dose protocols, respectively (P =.125)., Conclusions: Low-dose cone-beam CT angiography achieved equivalent clinical utility in identifying NTE during PAE, with the advantage of a lower radiation dose., (Copyright © 2020 SIR. Published by Elsevier Inc. All rights reserved.)- Published
- 2021
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21. Similar solutions to a common challenge: regulation of genes encoding Ralstonia solanacearum xanthine dehydrogenase.
- Author
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Sivapragasam S, Ghosh A, Kumar S, Johnson DT, and Grove A
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- Binding Sites genetics, Guanosine Pentaphosphate metabolism, Ligands, Models, Molecular, Operon genetics, Purines metabolism, Ralstonia solanacearum enzymology, Ralstonia solanacearum genetics, Ralstonia solanacearum metabolism, Repressor Proteins chemistry, Repressor Proteins metabolism, Transcription Factors chemistry, Transcription Factors metabolism, Xanthine metabolism, Xanthine Dehydrogenase metabolism, Gene Expression Regulation, Bacterial, Ralstonia solanacearum physiology, Xanthine Dehydrogenase genetics
- Abstract
The stringent response involves accumulation of (p)ppGpp, and it ensures that survival is prioritized. Production of (p)ppGpp requires purine synthesis, and upregulation of an operon that encodes the purine salvage enzyme xanthine dehydrogenase (Xdh) has been observed during stringent response in some bacterial species, where direct binding of ppGpp to a TetR-family transcription factor is responsible for increased xdh gene expression. We show here that the plant pathogen Ralstonia solanacearum has a regulatory system in which the LysR-family transcription factor XanR controls expression of the xan operon; this operon encodes Xdh as well as other enzymes involved in purine salvage, which favor accumulation of xanthine. XanR bound upstream of the xan operon, a binding that was attenuated on addition of either ppGpp or cyclic di-guanosine monophosphate (c-di-GMP). Using a reporter in which enhanced green fluorescent protein (EGFP) is expressed under control of a modified xan promoter, XanR was shown to repress EGFP production. Our data suggest that R. solanacearum features a regulatory mechanism in which expression of genes encoding purine salvage enzymes is controlled by a transcription factor that belongs to a different protein family, yet performs similar regulatory functions., (© The Author(s) 2021. Published by Oxford University Press on behalf of FEMS.)
- Published
- 2021
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22. MicroRNA let-7b downregulates AML1-ETO oncogene expression in t(8;21) AML by targeting its 3'UTR.
- Author
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Johnson DT, Davis AG, Zhou JH, Ball ED, and Zhang DE
- Abstract
Background: Acute myeloid leukemia (AML) with the t(8;21)(q22;q22) chromosomal translocation is among the most common subtypes of AML and produces the AML1-ETO (RUNX1-ETO, RUNX1-RUNX1T1) oncogenic fusion gene. AML1-ETO functions as an aberrant transcription factor which plays a key role in blocking normal hematopoiesis. Thus, the expression of AML1-ETO is critical to t(8;21) AML leukemogenesis and maintenance. Post-transcriptional regulation of gene expression is often mediated through interactions between trans-factors and cis-elements within transcript 3'-untranslated regions (UTR). AML1-ETO uses the 3'UTR of the ETO gene, which is not normally expressed in hematopoietic cells. Therefore, the mechanisms regulating AML1-ETO expression via the 3'UTR are attractive therapeutic targets., Methods: We used RNA-sequencing of t(8;21) patients and cell lines to examine the 3'UTR isoforms used by AML1-ETO transcripts. Using luciferase assay approaches, we test the relative contribution of 3'UTR cis elements to AML1-ETO expression. We further use let-7b microRNA mimics and anti-let-7b sponges for functional studies of t(8;21) AML cell lines., Results: In this study, we examine the regulation of AML1-ETO via the 3'UTR. We demonstrate that AML1-ETO transcripts primarily use a 3.7 kb isoform of the ETO 3'UTR in both t(8;21) patients and cell lines. We identify a negative regulatory element within the AML1-ETO 3'UTR. We further demonstrate that the let-7b microRNA directly represses AML1-ETO through this site. Finally, we find that let-7b inhibits the proliferation of t(8;21) AML cell lines, rescues expression of AML1-ETO target genes, and promotes differentiation., Conclusions: AML1-ETO is post-transcriptionally regulated by let-7b, which contributes to the leukemic phenotype of t(8;21) AML and may be important for t(8;21) leukemogenesis and maintenance.
- Published
- 2021
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23. Yttrium-90 selective internal radiotherapy as bridge to curative hepatectomy for recurrent malignant solid pseudopapillary neoplasm of pancreas: case report and review of literature.
- Author
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Dyas AR, Johnson DT, Rubin E, Schulick RD, and Kumar Sharma P
- Abstract
Recurrent malignant solid pseudopapillary neoplasms of the pancreas (SPNP) are rare tumors with unpredictable clinical and histopathological features. There is a lack of consensus regarding utilization of adjuvant modalities in conjunction with or in lieu of curative metastatectomy. We present a remarkable case where Yttrium-90 selective internal radiation therapy (Y-90 SIRT) was successfully utilized to elucidate underlying tumor biology and aid resection of a large multifocal recurrent metastatic SPNP in the right hemi-liver of a 59-year-old female. Thus, in cases where curative metastatectomy remains the treatment goal in management of recurrent and/or metastatic SPNPs, Y-90 SIRT is a safe and effective adjunct treatment to facilitate curative resection., (Published by Oxford University Press and JSCR Publishing Ltd. All rights reserved. © The Author(s) 2020.)
- Published
- 2020
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24. Phasic pressure measurements for coronary and valvular interventions using fluid-filled catheters: Errors, automated correction, and clinical implications.
- Author
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Johnson DT, Fournier S, Kirkeeide RL, De Bruyne B, Gould KL, and Johnson NP
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- Aged, Algorithms, Aortic Valve Stenosis physiopathology, Aortic Valve Stenosis therapy, Automation, Calibration, Cardiac Catheterization adverse effects, Cardiac Catheterization standards, Coronary Stenosis physiopathology, Coronary Stenosis therapy, Female, Fractional Flow Reserve, Myocardial, Humans, Male, Middle Aged, Predictive Value of Tests, Reproducibility of Results, Signal Processing, Computer-Assisted, Aorta physiopathology, Aortic Valve Stenosis diagnosis, Arterial Pressure, Cardiac Catheterization instrumentation, Cardiac Catheters standards, Coronary Stenosis diagnosis, Transducers, Pressure standards
- Abstract
Objectives: We sought to develop an automatic method for correcting common errors in phasic pressure tracings for physiology-guided interventions on coronary and valvular stenosis., Background: Effective coronary and valvular interventions rely on accurate hemodynamic assessment. Phasic (subcycle) indexes remain intrinsic to valvular stenosis and are emerging for coronary stenosis. Errors, corrections, and clinical implications of fluid-filled catheter phasic pressure assessments have not been assessed in the current era of ubiquitous, high-fidelity pressure wire sensors., Methods: We recruited patients undergoing invasive coronary physiology assessment. Phasic aortic pressure signals were recorded simultaneously using a fluid-filled guide catheter and 0.014″ pressure wire before and after standard calibration as well as after pullback. We included additional subjects undergoing hemodynamic assessment before and after transcatheter aortic valve implantation. Using the pressure wire as reference standard, we developed an automatic algorithm to match phasic pressures., Results: Removing pressure offset and temporal shift produced the largest improvements in root mean square (RMS) error between catheter and pressure wire signals. However, further optimization <1 mmHg RMS error was possible by accounting for differential gain and the oscillatory behavior of the fluid-filled guide. The impact of correction was larger for subcycle (like systole or diastole) versus whole-cycle metrics, indicating a key role for valvular stenosis and emerging coronary pressure ratios., Conclusions: When calibrating phasic aortic pressure signals using a pressure wire, correction requires these parameters: offset, timing, gain, and oscillations (frequency and damping factor). Automatically eliminating common errors may improve some clinical decisions regarding physiology-based intervention., (© 2020 The Authors. Catheterization and Cardiovascular Interventions published by Wiley Periodicals, Inc.)
- Published
- 2020
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25. Validation of the Applicability of In-Cell Fast Photochemical Oxidation of Proteins across Multiple Eukaryotic Cell Lines.
- Author
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Kaur U, Johnson DT, and Jones LM
- Subjects
- Animals, Caenorhabditis elegans, Cell Line, Cell Survival, Chromatography, Liquid, Eukaryotic Cells metabolism, Hydroxyl Radical chemistry, Hydroxyl Radical metabolism, Oxidation-Reduction, Photochemical Processes, Protein Interaction Mapping, Reproducibility of Results, Tandem Mass Spectrometry, Cytological Techniques methods, Protein Footprinting methods, Proteins chemistry, Proteins metabolism
- Abstract
Fast photochemical oxidation of proteins (FPOP), a hydroxyl radical-based protein footprinting method, coupled to mass spectrometry has been extensively used to study protein structure and protein-protein interactions in vitro . This method utilizes hydroxyl radicals to oxidatively modify solvent-accessible amino acids and has recently been demonstrated to modify proteins within live cells (IC-FPOP) and Caenorhabditis elegans . Here, we have expanded the application of IC-FPOP into a variety of commonly used cell lines to verify the applicability of the method across various cellular systems. IC-FPOP was able to successfully modify proteins in five different cell lines (Vero, HEK 293T, CHO, MCF-10A, and MCF-7). To increase the number of oxidatively modified proteins identified, we have also employed the use of offline high pH reversed-phase liquid chromatography (RPLC) followed by concatenation and online low-pH RPLC. The coupling of IC-FPOP to 2D-LC MS/MS resulted in a 1.7-fold increase in total identifications of oxidatively modified proteins, which expanded the dynamic range of the method. This work demonstrates the efficacy of using IC-FPOP to study protein-protein interactions in cells.
- Published
- 2020
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26. Gender Disparity in Inpatient Mortality After Transjugular Intrahepatic Portosystemic Shunt Creation in Patients Admitted With Hepatorenal Syndrome: A Nationwide Study.
- Author
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Trivedi PS, Brown MA, Rochon PJ, Ryu RK, and Johnson DT
- Subjects
- Female, Humans, Inpatients, Liver Cirrhosis, Logistic Models, Male, Retrospective Studies, Treatment Outcome, Hepatorenal Syndrome, Portasystemic Shunt, Transjugular Intrahepatic
- Abstract
Purpose: The aim of this study was to evaluate inpatient mortality after transjugular intrahepatic portosystemic shunt (TIPS) creation compared with medical management (MM) in patients with hepatorenal syndrome (HRS)., Methods: Patients with cirrhosis admitted with HRS between 2005 and 2014 were identified using associated International Classification of Diseases, Ninth Revision, codes in the National Inpatient Sample (n = 153,112). Non-TIPS candidates and patients with parenchymal renal disease were excluded (n = 73,454). The remaining admissions were assigned to groups of TIPS (International Classification of Diseases, Ninth Revision, code 39.1; n = 971) or MM (n = 78,687). Inpatient mortality was analyzed by treatment type and patient gender using χ
2 tests. Logistic regression was performed to control for baseline differences in patient demographics, comorbid disease, and pretreatment mortality risk., Results: Baseline patient demographics were similar. Patients treated medically had higher baseline disease severity (median mortality risk score, 8.3 with MM versus 6.1 with TIPS; P < .01). Inpatient mortality was strongly modified by patient gender. TIPS creation conferred inpatient mortality benefit in men (28% of the MM group versus 10% of the TIPS group, P < .01) independent of all covariates (odds ratio, 0.4; 95% confidence interval, 0.17-0.78; P < .01). Women treated with TIPS creation experienced no mortality benefit (29% MM versus 32% TIPS; odds ratio, 1.5; 95% confidence interval, 0.75-3.23; P = .23)., Conclusions: TIPS creation is associated with reduced inpatient mortality in men, but not women, admitted with HRS. Drivers of this gender-based disparity are currently unclear and warrant focused investigation., (Copyright © 2019 American College of Radiology. Published by Elsevier Inc. All rights reserved.)- Published
- 2020
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27. Implementing In-Cell Fast Photochemical Oxidation of Proteins in a Platform Incubator with a Movable XY Stage.
- Author
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Johnson DT, Punshon-Smith B, Espino JA, Gershenson A, and Jones LM
- Subjects
- Hydrodynamics, Models, Molecular, Oxidation-Reduction, Photochemical Processes, Protein Conformation, Incubators, Proteins chemistry, Single-Cell Analysis instrumentation, Software
- Abstract
Fast photochemical oxidation of proteins (FPOP) is a protein footprinting technique that is being increasingly used in MS-based proteomics. FPOP is utilized to study protein-protein interactions, protein-ligand interactions, and protein conformational dynamics. This method has recently been extended to protein labeling in live cells (IC-FPOP), allowing the study of protein conformations in the complex cellular environment. Traditionally, IC-FPOP has been executed using a single cell flow system, in which hydrodynamic focusing drives cells along in a single file line, keeping the cells from clumping and thus ensuring equal exposure to the laser irradiation required for photochemical oxidation. Here, we introduce a novel platform that allows IC-FPOP to occur in a sterile incubation system complete with a mobile stage for XY movement, peristaltic pumps equipped with perfusion lines for chemical transport, and mirrors for laser beam guidance. This new system, called Platform Incubator with movable XY stage (PIXY), also utilizes software enabling automated communication between equipment and execution of the entire system. Further, comparison with a standard IC-FPOP flow system results reveal that this platform can successfully be used in lieu of the flow system while also decreasing the time to complete analysis of a single sample.
- Published
- 2020
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28. Hippo kinase loss contributes to del(20q) hematologic malignancies through chronic innate immune activation.
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Stoner SA, Yan M, Liu KTH, Arimoto KI, Shima T, Wang HY, Johnson DT, Bejar R, Jamieson C, Guan KL, and Zhang DE
- Subjects
- Animals, Chromosome Deletion, Chromosomes, Human, Pair 20 genetics, Down-Regulation, Gene Expression Regulation, Neoplastic, Hematologic Neoplasms immunology, Humans, Immunity, Innate, Intracellular Signaling Peptides and Proteins, Mice, Myelodysplastic Syndromes immunology, Myeloproliferative Disorders immunology, Protein Serine-Threonine Kinases immunology, Hematologic Neoplasms genetics, Myelodysplastic Syndromes genetics, Myeloproliferative Disorders genetics, Protein Serine-Threonine Kinases genetics
- Abstract
Heterozygous deletions within chromosome 20q, or del(20q), are frequent cytogenetic abnormalities detected in hematologic malignancies. To date, identification of genes in the del(20q) common deleted region that contribute to disease development have remained elusive. Through assessment of patient gene expression, we have identified STK4 (encoding Hippo kinase MST1) as a 20q gene that is downregulated below haploinsufficient amounts in myelodysplastic syndrome (MDS) and myeloproliferative neoplasm (MPN). Hematopoietic-specific gene inactivation in mice revealed Hippo kinase loss to induce splenomegaly, thrombocytopenia, megakaryocytic dysplasia, and a propensity for chronic granulocytosis; phenotypes that closely resemble those observed in patients harboring del(20q). In a JAK2-V617F model, heterozygous Hippo kinase inactivation led to accelerated development of lethal myelofibrosis, recapitulating adverse MPN disease progression and revealing a novel genetic interaction between these 2 molecular events. Quantitative serum protein profiling showed that myelofibrotic transformation in mice was associated with cooperative effects of JAK2-V617F and Hippo kinase inactivation on innate immune-associated proinflammatory cytokine production, including IL-1β and IL-6. Mechanistically, MST1 interacted with IRAK1, and shRNA-mediated knockdown was sufficient to increase IRAK1-dependent innate immune activation of NF-κB in human myeloid cells. Consistent with this, treatment with a small molecule IRAK1/4 inhibitor rescued the aberrantly elevated IL-1β production in the JAK2-V617F MPN model. This study identified Hippo kinase MST1 (STK4) as having a central role in the biology of del(20q)-associated hematologic malignancies and revealed a novel molecular basis of adverse MPN progression that may be therapeutically exploitable via IRAK1 inhibition., (© 2019 by The American Society of Hematology.)
- Published
- 2019
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29. Loss of the tumor suppressor, Tp53, enhances the androgen receptor-mediated oncogenic transformation and tumor development in the mouse prostate.
- Author
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He Y, Johnson DT, Yang JS, Wu H, You S, Yoon J, Lee DH, Kim WK, Aldahl J, Le V, Hooker E, Yu EJ, Geradts J, Cardiff RD, and Sun Z
- Subjects
- Animals, Cell Transformation, Neoplastic genetics, Disease Progression, Gene Deletion, Gene Expression Regulation, Neoplastic, Humans, Male, Mice, Mice, Inbred C57BL, Mice, Transgenic, Neoplasm Invasiveness, Receptors, Androgen genetics, Signal Transduction genetics, Transcriptome, Prostatic Neoplasms genetics, Prostatic Neoplasms pathology, Receptors, Androgen physiology, SOXB1 Transcription Factors physiology, Tumor Suppressor Protein p53 genetics
- Abstract
Recent genome analysis of human prostate cancers demonstrated that both AR gene amplification and TP53 mutation are among the most frequently observed alterations in advanced prostate cancer. However, the biological role of these dual genetic alterations in prostate tumorigenesis is largely unknown. In addition, there are no biologically relevant models that can be used to assess the molecular mechanisms for these genetic abnormalities. Here, we report a novel mouse model, in which elevated transgenic AR expression and Trp53 deletion occur simultaneously in mouse prostatic epithelium to mimic human prostate cancer cells. These compound mice developed an earlier onset of high-grade prostatic intraepithelial neoplasia and accelerated prostate tumors in comparison with mice harboring only the AR transgene. Histological analysis showed prostatic sarcomatoid and basaloid carcinomas with massive squamous differentiation in the above compound mice. RNA-sequencing analyses identified a robust enrichment of the signature genes for human prostatic basal cell carcinomas in the above prostate tumors. Master regulator analysis revealed SOX2 as a transcriptional regulator in prostatic basal cell tumors. Elevated expression of SOX2 and its downstream target genes were detected in prostatic tumors of the compound mice. Chromatin immunoprecipitation analyses implicate a coregulatory role of AR and SOX2 in the expression of prostatic basal cell signature genes. Our data demonstrate a critical role of SOX2 in prostate tumorigenesis and provide mechanistic insight into prostate tumor aggressiveness and progression mediated by aberrant AR and p53 signaling pathways.
- Published
- 2019
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30. Fast photochemical oxidation of proteins (FPOP): A powerful mass spectrometry-based structural proteomics tool.
- Author
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Johnson DT, Di Stefano LH, and Jones LM
- Subjects
- Chromatography, High Pressure Liquid, Hydroxyl Radical chemistry, Lasers, Mass Spectrometry, Oxidation-Reduction, Protein Folding, Proteins metabolism, Proteins chemistry, Proteomics methods
- Abstract
Fast photochemical oxidation of proteins (FPOP) is a MS-based method that has proved useful in studies of protein structures, interactions, conformations, and protein folding. The success of this method relies on the irreversible labeling of solvent-exposed amino acid side chains by hydroxyl radicals. FPOP generates these radicals through laser-induced photolysis of hydrogen peroxide. The data obtained provide residue-level resolution of protein structures and interactions on the microsecond timescale, enabling investigations of fast processes such as protein folding and weak protein-protein interactions. An extensive comparison between FPOP and other footprinting techniques gives insight on their complementarity as well as the robustness of FPOP to provide unique structural information once unattainable. The versatility of this method is evidenced by both the heterogeneity of samples that can be analyzed by FPOP and the myriad of applications for which the method has been successfully used: from proteins of varying size to intact cells. This review discusses the wide applications of this technique and highlights its high potential. Applications including, but not limited to, protein folding, membrane proteins, structure elucidation, and epitope mapping are showcased. Furthermore, the use of FPOP has been extended to probing proteins in cells and in vivo These promising developments are also presented herein., (© 2019 Johnson et al.)
- Published
- 2019
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31. Immunotherapy and the Interventional Oncologist: Challenges and Opportunities-A Society of Interventional Oncology White Paper.
- Author
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Erinjeri JP, Fine GC, Adema GJ, Ahmed M, Chapiro J, den Brok M, Duran R, Hunt SJ, Johnson DT, Ricke J, Sze DY, Toskich BB, Wood BJ, Woodrum D, and Goldberg SN
- Subjects
- Humans, Societies, Medical, Immunotherapy methods, Medical Oncology methods, Neoplasms diagnostic imaging, Neoplasms therapy, Radiology, Interventional methods
- Abstract
Interventional oncology is a subspecialty field of interventional radiology that addresses the diagnosis and treatment of cancer and cancer-related problems by using targeted minimally invasive procedures performed with image guidance. Immuno-oncology is an innovative area of cancer research and practice that seeks to help the patient's own immune system fight cancer. Both interventional oncology and immuno-oncology can potentially play a pivotal role in cancer management plans when used alongside medical, surgical, and radiation oncology in the care of cancer patients., (© RSNA, 2019.)
- Published
- 2019
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32. Implementation of a Standardized Preoperative Diabetes Medication Guideline and its Effect on Day of Procedure Blood Glucose Levels.
- Author
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Cuevas DK, Rucker MT, Johnson DT, Crerar C, Wofford K, and Bonds R
- Subjects
- Adult, Aged, Anesthesia methods, Blood Glucose drug effects, Female, Health Knowledge, Attitudes, Practice, Humans, Male, Middle Aged, Personnel, Hospital statistics & numerical data, Surveys and Questionnaires, Diabetes Mellitus drug therapy, Hypoglycemic Agents administration & dosage, Practice Guidelines as Topic, Preoperative Care methods
- Abstract
Purpose: The purpose of this project was to determine the effect of implementation of a preoperative diabetes medication management guideline on day of procedure blood glucose (BG) levels., Design: This project was designed as pre- and postimplementation process improvement project based on the Iowa Model of evidence-based practice., Methods: Anesthesia providers were surveyed for knowledge and confidence before and following education. Surgical patients with diabetes were provided instructions for all classes of prescribed diabetes medications. Day of procedure BG levels were compared prior to and following the guideline implementation., Findings: Provider knowledge scores increased 4.5 points (95% confidence interval [CI] 3.2, 5.8) and confidence improved 31.3 percentage points (95% CI 20.8, 41.7). Mean BG level was 132.3 (SD 37.5) before implementation and 130.4 (SD 44.7) after implementation., Conclusions: The project resulted in significant gains in provider knowledge and confidence, but no significant difference in preoperative BG levels following implementation of the guideline., (Published by Elsevier Inc.)
- Published
- 2019
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33. Development of a Vertically Integrated Trainee Program: Linking Future and Young Physicians.
- Author
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Pettis JL, Johnson DT, Bosak JT, Brastauskas IM, Jansen EA, McNutt R, Raghavan RS, Huynh SL, Day AL, Walborn N, and DiPette DJ
- Subjects
- Humans, Young Adult, Attitude of Health Personnel, Education, Medical, Graduate methods, Internal Medicine education, Physicians psychology, Program Development, Students, Medical psychology, Training Support organization & administration
- Abstract
Supplemental digital content is available in the text.
- Published
- 2019
- Full Text
- View/download PDF
34. Evolution of Structural Biology through the Lens of Mass Spectrometry.
- Author
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Kaur U, Johnson DT, Chea EE, Deredge DJ, Espino JA, and Jones LM
- Subjects
- Animals, Antibodies chemistry, Cell Line, Humans, Mass Spectrometry methods, Membrane Proteins chemistry, Proteomics methods, Antibodies analysis, Membrane Proteins analysis
- Published
- 2019
- Full Text
- View/download PDF
35. Activation of hepatocyte growth factor/MET signaling initiates oncogenic transformation and enhances tumor aggressiveness in the murine prostate.
- Author
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Mi J, Hooker E, Balog S, Zeng H, Johnson DT, He Y, Yu EJ, Wu H, Le V, Lee DH, Aldahl J, Gonzalgo ML, and Sun Z
- Subjects
- Animals, Cell Transformation, Neoplastic genetics, Cell Transformation, Neoplastic pathology, Hepatocyte Growth Factor genetics, Male, Mice, Mice, Transgenic, PTEN Phosphohydrolase genetics, PTEN Phosphohydrolase metabolism, Prostatic Neoplasms genetics, Prostatic Neoplasms pathology, Proto-Oncogene Mas, Proto-Oncogene Proteins c-met genetics, Cell Transformation, Neoplastic metabolism, Hepatocyte Growth Factor metabolism, Prostatic Neoplasms metabolism, Proto-Oncogene Proteins c-met metabolism, Signal Transduction
- Abstract
Emerging evidence has shown that the hepatocyte growth factor (HGF) and its receptor, MET proto-oncogene, receptor tyrosine kinase (MET), promote cell proliferation, motility, morphogenesis, and angiogenesis. Whereas up-regulation of MET expression has been observed in aggressive and metastatic prostate cancer, a clear understanding of MET function in prostate tumorigenesis remains elusive. Here, we developed a conditional Met transgenic mouse strain, H11
Met/ + :PB-Cre4 , to mimic human prostate cancer cells with increased MET expression in the prostatic luminal epithelium. We found that these mice develop prostatic intraepithelial neoplasia after HGF administration. To further assess the biological role of MET in prostate cancer progression, we bred H11Met/ + /PtenLoxP/LoxP :PBCre4 compound mice, in which transgenic Met expression and deletion of the tumor suppressor gene Pten occurred simultaneously only in prostatic epithelial cells. These compound mice exhibited accelerated prostate tumor formation and invasion as well as increased metastasis compared with PtenLoxP/LoxP :PB-Cre4 mice. Moreover, prostatic sarcomatoid carcinomas and lesions resembling the epithelial-to-mesenchymal transition developed in tumor lesions of the compound mice. RNA-Seq and qRT-PCR analyses revealed a robust enrichment of known tumor progression and metastasis-promoting genes in samples isolated from H11Met/ + /PtenLoxP/LoxP :PB-Cre4 compound mice compared with those from PtenLoxP/LoxP :PB-Cre4 littermate controls. HGF-induced cell proliferation and migration also increased in mouse embryonic fibroblasts (MEFs) from animals with both Met transgene expression and Pten deletion compared with Pten- null MEFs. The results from these newly developed mouse models indicate a role for MET in hastening tumorigenesis and metastasis when combined with the loss of tumor suppressors., (© 2018 Mi et al.)- Published
- 2018
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36. Gain-of-function experiments with bacteriophage lambda uncover residues under diversifying selection in nature.
- Author
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Maddamsetti R, Johnson DT, Spielman SJ, Petrie KL, Marks DS, and Meyer JR
- Subjects
- Phylogeny, Bacteriophage lambda genetics, Evolution, Molecular, Gain of Function Mutation genetics, Selection, Genetic
- Abstract
Viral gain-of-function mutations frequently evolve during laboratory experiments. Whether the specific mutations that evolve in the lab also evolve in nature and whether they have the same impact on evolution in the real world is unknown. We studied a model virus, bacteriophage λ, that repeatedly evolves to exploit a new host receptor under typical laboratory conditions. Here, we demonstrate that two residues of λ's J protein are required for the new function. In natural λ variants, these amino acid sites are highly diverse and evolve at high rates. Insertions and deletions at these locations are associated with phylogenetic patterns indicative of ecological diversification. Our results show that viral evolution in the laboratory mirrors that in nature and that laboratory experiments can be coupled with protein sequence analyses to identify the causes of viral evolution in the real world. Furthermore, our results provide evidence for widespread host-shift evolution in lambdoid viruses., (© 2018 The Author(s). Evolution © 2018 The Society for the Study of Evolution.)
- Published
- 2018
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37. Pulmonary Complication following Drug-Eluting Bead Hepatic Chemoembolization.
- Author
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Brown M, Schramm K, Ryu R, and Johnson DT
- Published
- 2018
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38. Treatment of Liver Tumors with Transarterial Chemoembolization.
- Author
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Poliektov N and Johnson DT
- Published
- 2018
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39. Pressure gradient vs. flow relationships to characterize the physiology of a severely stenotic aortic valve before and after transcatheter valve implantation.
- Author
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Johnson NP, Zelis JM, Tonino PAL, Houthuizen P, Bouwman RA, Brueren GRG, Johnson DT, Koolen JJ, Korsten HHM, Wijnbergen IF, Zimmermann FM, Kirkeeide RL, Pijls NHJ, and Gould KL
- Subjects
- Aged, 80 and over, Blood Pressure, Female, Humans, Male, Regional Blood Flow, Severity of Illness Index, Time Factors, Aortic Valve physiology, Aortic Valve surgery, Aortic Valve Stenosis physiopathology, Aortic Valve Stenosis surgery, Transcatheter Aortic Valve Replacement
- Abstract
Aims: Echocardiography and tomographic imaging have documented dynamic changes in aortic stenosis (AS) geometry and severity during both the cardiac cycle and stress-induced increases in cardiac output. However, corresponding pressure gradient vs. flow relationships have not been described., Methods and Results: We recruited 16 routine transcatheter aortic valve implantations (TAVI's) for graded dobutamine infusions both before and after implantation; 0.014″ pressure wires in the aorta and left ventricle (LV) continuously measured the transvalvular pressure gradient (ΔP) while a pulmonary artery catheter regularly assessed cardiac output by thermodilution. Before TAVI, ΔP did not display a consistent relationship with transvalvular flow (Q). Neither linear resistor (median R2 0.16) nor quadratic orifice (median R2 < 0.01) models at rest predicted stress observations; the severely stenotic valve behaved like a combination. The unitless ratio of aortic to left ventricular pressures during systolic ejection under stress conditions correlated best with post-TAVI flow improvement. After TAVI, a highly linear relationship (median R2 0.96) indicated a valid valve resistance., Conclusion: Pressure loss vs. flow curves offer a fundamental fluid dynamic synthesis for describing aortic valve pathophysiology. Severe AS does not consistently behave like an orifice (as suggested by Gorlin) or a resistor, whereas TAVI devices behave like a pure resistor. During peak dobutamine, the ratio of aortic to left ventricular pressures during systolic ejection provides a 'fractional flow reserve' of the aortic valve that closely approximates the complex, changing fluid dynamics. Because resting assessment cannot reliably predict stress haemodynamics, 'valvular fractional flow' warrants study to explain exertional symptoms in patients with only moderate AS at rest.
- Published
- 2018
- Full Text
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40. Destabilizing mutations encode nongenetic variation that drives evolutionary innovation.
- Author
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Petrie KL, Palmer ND, Johnson DT, Medina SJ, Yan SJ, Li V, Burmeister AR, and Meyer JR
- Subjects
- Bacterial Outer Membrane Proteins genetics, Mutation, Porins genetics, Receptors, Virus genetics, Viral Tail Proteins genetics, Bacteriophage lambda genetics, Evolution, Molecular, Genetic Fitness, Genetic Variation
- Abstract
Evolutionary innovations are often achieved by repurposing existing genes to perform new functions; however, the mechanisms enabling the transition from old to new remain controversial. We identified mutations in bacteriophage λ's host-recognition gene J that confer enhanced adsorption to λ's native receptor, LamB, and the ability to access a new receptor, OmpF. The mutations destabilize λ particles and cause conformational bistability of J, which yields progeny of multiple phenotypic forms, each proficient at different receptors. This work provides an example of how nongenetic protein variation can catalyze an evolutionary innovation. We propose that cases where a single genotype can manifest as multiple phenotypes may be more common than previously expected and offer a general mechanism for evolutionary innovation., (Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2018
- Full Text
- View/download PDF
41. Heparin-Induced Thrombocytopenia and Thrombosis: Preventing your Thrombolysis Practice from Taking a HITT.
- Author
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Wannamaker E, Kondo K, and Johnson DT
- Abstract
Heparin-induced thrombocytopenia and thrombosis (HITT) is an under-recognized cause of deep venous thrombosis treatment failure and of complications during catheter-directed thrombolysis. After a review of HITT pathophysiology, diagnosis, and management, three different cases are presented in this article. Each case highlights subtleties and challenges of HITT diagnosis and management. An example of a practical approach to the diagnosis of HITT is presented.
- Published
- 2017
- Full Text
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42. The law of unintended consequences: current design challenges in inferior vena cava filters.
- Author
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Magnowski A, Brown M, Schramm K, Lindquist J, Rochon PJ, Johnson DT, Kondo KL, Desai K, Lewandowski RJ, and Ryu RK
- Subjects
- Device Removal, History, 20th Century, Humans, Vena Cava Filters history, Prosthesis Design, Pulmonary Embolism prevention & control, Thromboembolism prevention & control, Vena Cava Filters adverse effects, Venous Thrombosis prevention & control
- Abstract
Introduction: Venous thromboembolic disease (VTD) encompassing deep vein thrombosis (DVT) and pulmonary embolism (PE) is a commonly encountered condition with potentially fatal sequelae. When unable to be adequately anticoagulated, patients require a mechanical means to prevent PE. This review discusses the history of inferior vena cava interruption and the development of inferior vena cava filters (IVCF). Areas covered: Milestone innovations in the mechanical treatment of VTD, their successes and shortcomings are discussed. The unforeseen complications that have occurred with implantation of IVCF have a profound impact on the present utilization of retrievable filters. Particular attention is dedicated to the evidence for safe and effective use of IVCF and the challenges presented to further improvement of these technologies. Expert commentary: While evidence suggests that IVCF are effective in preventing PE, the recent 'de-volution' from permanent to retrievable design has unleashed an epidemic device-related complications. Retrievable filter design is reliant on a 'Goldilocks' premise: make the device stable (so it doesn't migrate), but not too stable (so you can still retrieve it). Efforts must be aimed at optimizing utilization using decision support tools, meticulous follow up after deployment, and conversion from retrievable to permanent devices if the patient requires lifelong mechanical prophylaxis.
- Published
- 2017
- Full Text
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43. LZTS2 and PTEN collaboratively regulate ß-catenin in prostatic tumorigenesis.
- Author
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Yu EJ, Hooker E, Johnson DT, Kwak MK, Zou K, Luong R, He Y, and Sun Z
- Subjects
- Animals, Cell Cycle Proteins metabolism, Cell Line, Tumor, Cell Proliferation genetics, DNA-Binding Proteins metabolism, Gene Expression Regulation genetics, Genetic Predisposition to Disease, Humans, Male, Mice, Mice, Knockout, PTEN Phosphohydrolase metabolism, Promoter Regions, Genetic genetics, RNA Interference, RNA, Small Interfering genetics, Tumor Suppressor Proteins metabolism, Wnt Signaling Pathway genetics, beta Catenin genetics, Cell Cycle Proteins genetics, Cell Transformation, Neoplastic genetics, DNA-Binding Proteins genetics, PTEN Phosphohydrolase genetics, Prostatic Neoplasms pathology, Tumor Suppressor Proteins genetics, beta Catenin metabolism
- Abstract
The leucine zipper tumor suppressor 2 (LZTS2) was identified as a tumor susceptibility gene within the 10q24.3 chromosomal region, and is approximately 15Mb from the PTEN locus. This region containing the both loci is frequently deleted in a variety of human malignancies, including prostate cancer. LZTS2 is a ß-catenin-binding protein and a negative regulator of Wnt signaling. Overexpression of PTEN in prostate cancer cell lines reduces ß-catenin-mediated transcriptional activity. In this study, we examined the collaborative effect of PTEN and LZTS2 using multiple in vitro and in vivo approaches. Co-expression of PTEN and LZTS2 in prostate cancer cells shows stronger repressive effect on ß-catenin mediated transcription. Using a newly generated mouse model, we further assessed the effect of simultaneous deletion of Pten and Lzts2 in the murine prostate. We observed that mice with both Lzts2 and Pten deletion have an earlier onset of prostate carcinomas as well as an accelerated tumor progression compared to mice with Pten or Lzts2 deletion alone. Immunohistochemical analyses show that atypical and tumor cells from compound mice with both Pten and Lzts2 deletion are mainly composed of prostate luminal epithelial cells and possess higher levels of cytoplasmic and nuclear β-catenin. These cells also exhibit a higher proliferative capacity than cells isolated from single deletion mice. These data demonstrate the significance of simultaneous Pten and Lzts2 deletion in oncogenic transformation in prostate cells and implicates a new mechanism for the dysregulation of Wnt/β-catenin signaling in prostate tumorigenesis.
- Published
- 2017
- Full Text
- View/download PDF
44. Comparison of Color Attractiveness for Agrilus ruficollis (Coleoptera: Buprestidae): Potential for a Simple Trap.
- Author
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Kim SH, Trammel CE, Lewis BA, and Johnson DT
- Subjects
- Animals, Female, Male, Seasons, Coleoptera physiology, Color, Insect Control methods, Phototaxis
- Abstract
The rednecked cane borer, Agrilus ruficollis (F.), is a pest of cultivated and wild blackberries in the midwestern and eastern parts of the United States. Damage from this pest occurs from larvae girdling primocanes and tunneling in the pith, forming galls that can potentially reduce yields. There is only one registered insecticide and no trap available for monitoring. Paints mimicking the spectral reflectance of blackberry leaves and canes of both primocane and floricane were applied to wooden dowels or corrugated plastic mimicking the shape of blackberry canes and leaves. The dowels or corrugated plastic were covered with sticky Tangletrap, and field was evaluated for attractiveness to A. ruficollis for three years, with modifications to trap design each year. Commercially available emerald ash borer, Agrilus planipennis Fairmaire, funnel traps were evaluated for attractiveness to A. ruficollis in 2014. In 2011, the greatest numbers of A. ruficollis adults were captured on prism-shaped, primocane-mimicking traps that reflected light at a peak wavelength between 540-560 nm. In 2012 and 2013, field tests demonstrated that more A. ruficollis adults were captured on green emerald ash borer traps. Testing in 2014 reinforced the previous findings that A. ruficollis was most attracted to the green emerald ash borer traps. In 2013, it was noted that colored traps usually captured significantly more A. ruficollis males than females. This indicated a need to determine if there was a chemical cue used by A. ruficollis adult females to locate and oviposit on only blackberry primocanes and not floricanes., (© The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2016
- Full Text
- View/download PDF
45. Use of and barriers to access to opioid analgesics: a worldwide, regional, and national study.
- Author
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Berterame S, Erthal J, Thomas J, Fellner S, Vosse B, Clare P, Hao W, Johnson DT, Mohar A, Pavadia J, Samak AK, Sipp W, Sumyai V, Suryawati S, Toufiq J, Yans R, and Mattick RP
- Subjects
- Analgesics, Opioid supply & distribution, Attitude of Health Personnel, Drug Administration Schedule, Drug Utilization statistics & numerical data, Drug Utilization trends, Global Health trends, Health Care Surveys, Health Services Accessibility statistics & numerical data, Humans, Longitudinal Studies, Neoplasms drug therapy, Neoplasms epidemiology, Pain Management methods, Pain Management statistics & numerical data, Analgesics, Opioid administration & dosage, Global Health statistics & numerical data, Pain Management standards
- Abstract
Background: Despite opioid analgesics being essential for pain relief, use has been inadequate in many countries. We aim to provide up-to-date worldwide, regional, and national data for changes in opioid analgesic use, and to analyse the relation of impediments to use of these medicines., Methods: We calculated defined daily doses for statistical purposes (S-DDD) per million inhabitants per day of opioid analgesics worldwide and for regions and countries from 2001 to 2013, and we used generalised estimating equation analysis to assess longitudinal change in use. We compared use data against the prevalence of some health disorders needing opioid use. We surveyed 214 countries or territories about impediments to availability of these medicines, and used regression analyses to establish the strength of associations between impediments and use., Findings: The S-DDD of opioid analgesic use more than doubled worldwide between 2001-03 and 2011-13, from 1417 S-DDD (95% CI -732 to 3565; totalling about 3.01 billion defined daily doses per annum) to 3027 S-DDD (-1162 to 7215; totalling about 7.35 billion defined daily doses per annum). Substantial increases occurred in North America (16,046 S-DDD [95% CI 4032-28,061] to 31,453 S-DDD [8121-54,785]), western and central Europe (3079 S-DDD [1274-4883] to 9320 S-DDD [3969-14,672]), and Oceania (2275 S-DDD [763-3787] to 9136 S-DDD [2508-15,765]). Countries in other regions have shown no substantial increase in use. Impediments to use included an absence of training and awareness in medical professionals, fear of dependence, restricted financial resources, issues in sourcing, cultural attitudes, fear of diversion, international trade controls, and onerous regulation. Higher number of impediments reported was significantly associated with lower use (unadjusted incidence rate ratio 0.39 [95% CI 0.29-0.52]; p<0.0001), but not when adjusted for gross domestic product and human development index (0.91 [0.73-1.14]; p=0.4271)., Interpretation: Use of opioid analgesics has increased, but remains low in Africa, Asia, Central America, the Caribbean, South America, and eastern and southeastern Europe. Identified impediments to use urgently need to be addressed by governments and international agencies., Funding: International Narcotics Control Board, UN., (Copyright © 2016 Elsevier Ltd. All rights reserved.)
- Published
- 2016
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46. Androgen signaling is a confounding factor for β-catenin-mediated prostate tumorigenesis.
- Author
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Lee SH, Luong R, Johnson DT, Cunha GR, Rivina L, Gonzalgo ML, and Sun Z
- Subjects
- Adenocarcinoma genetics, Adenocarcinoma metabolism, Adenocarcinoma pathology, Animals, Cell Transformation, Neoplastic metabolism, Humans, Male, Mice, Mice, Inbred C57BL, Mice, Inbred NOD, Mice, SCID, Mice, Transgenic, Prostatic Intraepithelial Neoplasia genetics, Prostatic Intraepithelial Neoplasia metabolism, Prostatic Intraepithelial Neoplasia pathology, Prostatic Neoplasms metabolism, Prostatic Neoplasms pathology, Signal Transduction genetics, beta Catenin metabolism, Androgens metabolism, Cell Transformation, Neoplastic genetics, Prostatic Neoplasms genetics, beta Catenin genetics
- Abstract
Emerging evidence has demonstrated the critical roles for both androgen and Wnt pathways in prostate tumorigenesis. A recent integrative genomic analysis of human prostate cancers (PCas) has revealed a unique enrichment of androgen and Wnt signaling in early-onset PCas, implying their clinical significance in the disease. Additionally, interaction between the androgen receptor (AR) and β-catenin has long been detected in PCa cells. However, the consequence of this interaction in prostate tumorigenesis is still unknown. Because mutations in adenomatous polyposis coli, β-catenin and other components of the destruction complex are generally rare in PCas, other mechanisms of aberrant Wnt signaling activation have been speculated. To address these critical questions, we developed Ctnnb1(L(ex3)/+)/R26hAR(L/+):PB-Cre4 mice, in which transgenic AR and stabilized β-catenin are co-expressed in prostatic epithelial cells. We observed accelerated tumor development, aggressive tumor invasion and a decreased survival rate in Ctnnb1(L(ex3)/+)/R26hAR(L/+):PB-Cre4 compound mice compared with age-matched Ctnnb1(L(ex3)/+):PB-Cre4 littermate controls, which only have stabilized β-catenin expression in the prostate. Castration of the above transgenic mice resulted in significant tumor regression, implying an essential role of androgen signaling in tumor growth and maintenance. Implantation of the prostatic epithelial cells isolated from the transgenic mice regenerated prostate intraepithelial neoplasias and prostatic adenocarcinoma lesions. Microarray analyses of transcriptional profiles showed more robust enrichment of known tumor- and metastasis-promoting genes: Spp1, Egr1, c-Myc, Sp5, and Sp6 genes, in samples isolated from Ctnnb1(L(ex3)/+)/R26hAR(L/+):PB-Cre4 compound mice than those from Ctnnb1(L(ex3)/+):PB-Cre4 and R26hAR(L/+):PB-Cre4 littermate controls. Together, these data demonstrate a confounding role of androgen signaling in β-catenin-initiated oncogenic transformation in prostate tumorigenesis.
- Published
- 2016
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47. Conditional Expression of the Androgen Receptor Increases Susceptibility of Bladder Cancer in Mice.
- Author
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Johnson DT, Hooker E, Luong R, Yu EJ, He Y, Gonzalgo ML, and Sun Z
- Subjects
- Animals, Butylhydroxybutylnitrosamine, Carcinoma, Transitional Cell chemically induced, Carcinoma, Transitional Cell genetics, Cell Division, Cell Transformation, Neoplastic, Drug Implants, Female, Genetic Predisposition to Disease, Humans, Integrases, Male, Mice, Mice, Transgenic, Neoplasms, Hormone-Dependent chemically induced, Neoplasms, Hormone-Dependent genetics, Orchiectomy, Promoter Regions, Genetic drug effects, Receptors, Androgen genetics, Recombinant Fusion Proteins metabolism, Tamoxifen pharmacology, Testosterone administration & dosage, Transgenes, Urinary Bladder Neoplasms chemically induced, Urinary Bladder Neoplasms genetics, Uroplakin III biosynthesis, Uroplakin III genetics, Androgens, Carcinoma, Transitional Cell etiology, Neoplasms, Hormone-Dependent etiology, Receptors, Androgen physiology, Urinary Bladder Neoplasms etiology
- Abstract
Bladder cancer represents a significant human tumor burden, accounting for about 7.7% and 2.4% of all cancer cases in males and females, respectively. While men have a higher risk of developing bladder cancer, women tend to present at a later stage of disease and with more aggressive tumors. Previous studies have suggested a promotional role of androgen signaling in enhancing bladder cancer development. To directly assess the role of androgens in bladder tumorigenesis, we have developed a novel transgenic mouse strain, R26hARLoxP/+:Upk3aGCE/+, in which the human AR transgene is conditionally expressed in bladder urothelium. Intriguingly, both male and female R26hARLoxP/+:Upk3aGCE/+ mice display a higher incidence of urothelial cell carcinoma (UCC) than the age and sex matched control littermates in response to the carcinogen, N-butyl-N-(4-hydroxybutyl) nitrosamine (BBN). We detect expression of the human AR transgene in CK5-positive and p63-positive basal cells in bladder urothelium. Further analyses of UCC tissues from R26hARLoxP/+:Upk3aGCE/+ mice showed that the majority of tumor cells are of urothelial basal cell origin. Positive immunostaining of transgenic AR protein was observed in the majority of tumor cells of the transgenic mice, providing a link between transgenic AR expression and oncogenic transformation. We observed an increase in Ki67 positive cells within the UCC lesions of transgenic AR mice. Manipulating endogenous androgen levels by castration and androgen supplementation directly affected bladder tumor development in male and female R26hARLoxP/+:Upk3aGCE/+ mice, respectively. Taken together, our data demonstrate for the first time that conditional activation of transgenic AR expression in bladder urothelium enhances carciongen-induced bladder tumor formation in mice. This new AR transgenic mouse line mimics certain features of human bladder cancer and can be used to study bladder tumorigenesis and for drug development.
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- 2016
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48. Serotonergic systems in the balance: CRHR1 and CRHR2 differentially control stress-induced serotonin synthesis.
- Author
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Donner NC, Siebler PH, Johnson DT, Villarreal MD, Mani S, Matti AJ, and Lowry CA
- Subjects
- Amygdala drug effects, Amygdala metabolism, Animals, Anxiety genetics, Anxiety metabolism, Corticosterone pharmacology, Dorsal Raphe Nucleus drug effects, Dorsal Raphe Nucleus metabolism, Homeostasis drug effects, Homeostasis genetics, Male, Metabolic Networks and Pathways drug effects, Metabolic Networks and Pathways genetics, Rats, Rats, Sprague-Dawley, Stress, Psychological genetics, Tryptophan Hydroxylase genetics, Tryptophan Hydroxylase metabolism, Receptors, Corticotropin-Releasing Hormone physiology, Serotonin metabolism, Stress, Psychological metabolism
- Abstract
Anxiety and affective disorders are often associated with hypercortisolism and dysfunctional serotonergic systems, including increased expression of TPH2, the gene encoding the rate-limiting enzyme of neuronal serotonin synthesis. We previously reported that chronic glucocorticoid exposure is anxiogenic and increases rat Tph2 mRNA expression, but it was still unclear if this also translates to increased TPH2 protein levels and in vivo activity of the enzyme. Here, we found that adult male rats treated with corticosterone (CORT, 100 μg/ml) via the drinking water for 21 days indeed show increased TPH2 protein expression in the dorsal and ventral part of the dorsal raphe nucleus (DRD, DRV) during the light phase, abolishing the enzyme's diurnal rhythm. In a second study, we systemically blocked the conversion of 5-hydroxytryptophan (5-HTP) to serotonin immediately before rats treated with CORT or vehicle were either exposed to 30 min acoustic startle stress or home cage control conditions. This allowed us to measure 5-HTP accumulation as a direct readout of basal versus stress-induced in vivo TPH2 activity. As expected, basal TPH2 activity was elevated in the DRD, DRV and MnR of CORT-treated rats. In response to stress, a multitude of serotonergic systems reacted with increased TPH2 activity, but the stress-, anxiety-, and learned helplessness-related dorsal and caudal DR (DRD/DRC) displayed stress-induced increases in TPH2 activity only after chronic CORT-treatment. To address the mechanisms underlying this region-specific CORT-dependent sensitization, we stereotaxically implanted CORT-treated rats with cannulae targeting the DR, and pharmacologically blocked either corticotropin-releasing hormone receptor type 1 (CRHR1) or type 2 (CRHR2) 10 min prior to acoustic startle stress. CRHR2 blockade prevented stress-induced increases of TPH2 activity within the DRD/DRC, while blockade of CRHR1 potentiated stress-induced TPH2 activity in the entire DR. Stress-induced TPH2 activity in the DRD/DRC furthermore predicted TPH2 activity in the amygdala and in the caudal pontine reticular nucleus (PnC), while serotonin synthesis in the PnC was strongly correlated with the maximum startle response. Our data demonstrate that chronically elevated glucocorticoids sensitize stress- and anxiety-related serotonergic systems, and for the first time reveal competing roles of CRHR1 and CRHR2 on stress-induced in vivo serotonin synthesis., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2016
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49. Wnt/β-Catenin-Responsive Cells in Prostatic Development and Regeneration.
- Author
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Lee SH, Johnson DT, Luong R, Yu EJ, Cunha GR, Nusse R, and Sun Z
- Subjects
- Animals, Cell Lineage, Epithelial Cells metabolism, Male, Mice, Mice, Transgenic, Organogenesis physiology, Prostate cytology, Axin Protein biosynthesis, Prostate growth & development, Prostate metabolism, Regeneration physiology, Wnt Signaling Pathway physiology, beta Catenin biosynthesis
- Abstract
The precise role of Wnt/β-catenin signaling during prostatic development and tumorigenesis is unclear. Axin2 is a direct transcriptional target of β-catenin. Recent studies have shown that Axin2-expressing cells have stem/progenitor cell properties in a variety of mouse tissues. Here, we genetically labeled Axin2-expressing cells at various time points and tracked their cellular behavior at different developmental and mature stages. We found that prostatic Axin2-expressing cells mainly express luminal epithelial cell markers and are able to expand luminal cell lineages during prostatic development and maturation. They can also survive androgen withdrawal and regenerate prostatic luminal epithelial cells following androgen replacement. Deletion of β-catenin or expression of stabilized β-catenin in these Axin2-expressing cells results in abnormal development or oncogenic transformation, respectively. Our study uncovers a critical role of Wnt/β-catenin-responsive cells in prostatic development and regeneration, and that dysregulation of Wnt/β-catenin signaling in these cells contributes to prostatic developmental defects and tumorigenesis., (© 2015 AlphaMed Press.)
- Published
- 2015
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50. Repeatability of Fractional Flow Reserve Despite Variations in Systemic and Coronary Hemodynamics.
- Author
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Johnson NP, Johnson DT, Kirkeeide RL, Berry C, De Bruyne B, Fearon WF, Oldroyd KG, Pijls NHJ, and Gould KL
- Subjects
- Adenosine administration & dosage, Algorithms, Arterial Pressure, Coronary Artery Disease physiopathology, Coronary Stenosis physiopathology, Coronary Vessels drug effects, Europe, Humans, Hyperemia physiopathology, Infusions, Intravenous, Predictive Value of Tests, Reproducibility of Results, Severity of Illness Index, Signal Processing, Computer-Assisted, Time Factors, United States, Vasodilator Agents administration & dosage, Cardiac Catheterization, Coronary Artery Disease diagnosis, Coronary Stenosis diagnosis, Coronary Vessels physiopathology, Fractional Flow Reserve, Myocardial drug effects, Hemodynamics drug effects
- Abstract
Objectives: This study classified and quantified the variation in fractional flow reserve (FFR) due to fluctuations in systemic and coronary hemodynamics during intravenous adenosine infusion., Background: Although FFR has become a key invasive tool to guide treatment, questions remain regarding its repeatability and stability during intravenous adenosine infusion because of systemic effects that can alter driving pressure and heart rate., Methods: We reanalyzed data from the VERIFY (VERification of Instantaneous Wave-Free Ratio and Fractional Flow Reserve for the Assessment of Coronary Artery Stenosis Severity in EverydaY Practice) study, which enrolled consecutive patients who were infused with intravenous adenosine at 140 μg/kg/min and measured FFR twice. Raw phasic pressure tracings from the aorta (Pa) and distal coronary artery (Pd) were transformed into moving averages of Pd/Pa. Visual analysis grouped Pd/Pa curves into patterns of similar response. Quantitative analysis of the Pd/Pa curves identified the "smart minimum" FFR using a novel algorithm, which was compared with human core laboratory analysis., Results: A total of 190 complete pairs came from 206 patients after exclusions. Visual analysis revealed 3 Pd/Pa patterns: "classic" (sigmoid) in 57%, "humped" (sigmoid with superimposed bumps of varying height) in 39%, and "unusual" (no pattern) in 4%. The Pd/Pa pattern repeated itself in 67% of patient pairs. Despite variability of Pd/Pa during the hyperemic period, the "smart minimum" FFR demonstrated excellent repeatability (bias -0.001, SD 0.018, paired p = 0.93, r(2) = 98.2%, coefficient of variation = 2.5%). Our algorithm produced FFR values not significantly different from human core laboratory analysis (paired p = 0.43 vs. VERIFY; p = 0.34 vs. RESOLVE)., Conclusions: Intravenous adenosine produced 3 general patterns of Pd/Pa response, with associated variability in aortic and coronary pressure and heart rate during the hyperemic period. Nevertheless, FFR - when chosen appropriately - proved to be a highly reproducible value. Therefore, operators can confidently select the "smart minimum" FFR for patient care. Our results suggest that this selection process can be automated, yet comparable to human core laboratory analysis., (Copyright © 2015 American College of Cardiology Foundation. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
- Full Text
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