268 results on '"Jones PL"'
Search Results
2. Early Vision for the CTSA Program Trial Innovation Network: A Perspective from the National Center for Advancing Translational Sciences
- Author
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Shah, MR, primary, Culp, MA, additional, Gersing, KR, additional, Jones, PL, additional, Purucker, ME, additional, Urv, T, additional, Wilson, TM, additional, and Kaufmann, P, additional
- Published
- 2017
- Full Text
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3. Integrating CERN e-groups into TWiki access control
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Jones, PL, Bernegger, A, and Hoymr, N
- Subjects
ComputingMethodologies_DOCUMENTANDTEXTPROCESSING ,Computing and Computers - Abstract
Wikis allow for easy collaborative editing of documents on the web for users located in different buildings, cities or even countries. TWiki culture lends to open free form editing and most pages are world readable and editable by CERN authenticated users, however access control is possible and is used to protect sensitive documents. This note discusses the integration of E-groups for authorisation purposes at CERN.
- Published
- 2010
4. A case of fatal tumor embolus following trauma in a patient with undiagnosed Wilms' tumor
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Nathan M, Lambert Aw, Huddart Sn, and Jones Pl
- Subjects
medicine.medical_specialty ,Pulmonary Artery ,Inferior vena cava ,Wilms Tumor ,Renal Veins ,Fatal Outcome ,Embolus ,medicine.artery ,medicine ,Humans ,cardiovascular diseases ,Tumor embolus ,Intraoperative Complications ,business.industry ,Respiratory disease ,Wilms' tumor ,General Medicine ,medicine.disease ,Neoplastic Cells, Circulating ,Kidney Neoplasms ,Surgery ,medicine.vein ,Embolism ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Pulmonary artery ,cardiovascular system ,Emergency Medicine ,Wounds and Injuries ,Accidental Falls ,Female ,Radiology ,Emergencies ,business ,Kidney disease - Abstract
Involvement of the inferior vena cava with tumor thrombus has been reported in 5 to 10% of patients with Wilms' tumor (1). Preoperative imaging usually alerts the surgeon to the extent of the intravascular extension. We present a case report of trauma to a previously undiagnosed Wilms' tumor that resulted in a fatal intraoperative pulmonary tumor embolus.
- Published
- 2001
5. Transient high glucose causes persistent epigenetic changes and altered gene expression during subsequent normoglycemia
- Author
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El-Osta, A, Brasacchio, D, Yao, D, Pocai, A, Jones, PL, Roeder, RG, Cooper, ME, Brownlee, M, El-Osta, A, Brasacchio, D, Yao, D, Pocai, A, Jones, PL, Roeder, RG, Cooper, ME, and Brownlee, M
- Abstract
The current goal of diabetes therapy is to reduce time-averaged mean levels of glycemia, measured as HbA1c, to prevent diabetic complications. However, HbA1c only explains <25% of the variation in risk of developing complications. Because HbA1c does not correlate with glycemic variability when adjusted for mean blood glucose, we hypothesized that transient spikes of hyperglycemia may be an HbA1c-independent risk factor for diabetic complications. We show that transient hyperglycemia induces long-lasting activating epigenetic changes in the promoter of the nuclear factor kappaB (NF-kappaB) subunit p65 in aortic endothelial cells both in vitro and in nondiabetic mice, which cause increased p65 gene expression. Both the epigenetic changes and the gene expression changes persist for at least 6 d of subsequent normal glycemia, as do NF-kappaB-induced increases in monocyte chemoattractant protein 1 and vascular cell adhesion molecule 1 expression. Hyperglycemia-induced epigenetic changes and increased p65 expression are prevented by reducing mitochondrial superoxide production or superoxide-induced alpha-oxoaldehydes. These results highlight the dramatic and long-lasting effects that short-term hyperglycemic spikes can have on vascular cells and suggest that transient spikes of hyperglycemia may be an HbA1c-independent risk factor for diabetic complications.
- Published
- 2008
6. Gas exchange at extreme altitude: results from the British 40th Anniversary Everest Expedition
- Author
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Peacock, AJ, primary and Jones, PL, additional
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- 1997
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7. Time-of-flight and particle density measurement using a modulated beam mass spectrometer
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Benyezzar, M, primary, King, D, additional, Jones, PL, additional, and Moore, D, additional
- Published
- 1992
- Full Text
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8. Microsomal prostaglandin e2 synthase-1 modulates the response to vascular injury.
- Author
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Wang M, Ihida-Stansbury K, Kothapalli D, Tamby MC, Yu Z, Chen L, Grant G, Cheng Y, Lawson JA, Assoian RK, Jones PL, Fitzgerald GA, Wang, Miao, Ihida-Stansbury, Kaori, Kothapalli, Devashish, Tamby, Mathieu C, Yu, Zhou, Chen, Lihong, Grant, Gregory, and Cheng, Yan
- Published
- 2011
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9. Factors related to youth living with HIV delaying access to care: the role of positive and negative social network influences on health seeking behaviors.
- Author
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Jones PL, Modeste NN, Montgomery SB, Wilson CM, and Batterham PJ
- Published
- 2008
10. Epidermal growth factor receptor blockade mediates smooth muscle cell apoptosis and improves survival in rats with pulmonary hypertension.
- Author
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Merklinger SL, Jones PL, Martinez EC, and Rabinovitch M
- Published
- 2005
11. Development of occlusive neointimal lesions in distal pulmonary arteries of endothelin B receptor-deficient rats: a new model of severe pulmonary arterial hypertension.
- Author
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Ivy DD, McMurtry IF, Colvin K, Imamura M, Oka M, Lee D, Gebb S, Jones PL, Ivy, D Dunbar, McMurtry, Ivan F, Colvin, Kelley, Imamura, Masatoshi, Oka, Masahiko, Lee, Dong-Seok, Gebb, Sarah, and Jones, Peter Lloyd
- Published
- 2005
12. Chronic low back pain: the relationship between patient satisfaction and pain, impairment, and disability outcomes.
- Author
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Hazard RG, Haugh LD, Green PA, and Jones PL
- Published
- 1994
13. Metabolic and cardiovascular side effects of the beta 2-adrenoceptor agonists salbutamol and rimiterol.
- Author
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Phillips, PJ, Vedig, AE, Jones, PL, Chapman, MG, Collins, M., Edwards, JB, Smeaton, TC, and Duncan, BM
- Abstract
The metabolic and cardiovascular side-effects of intravenous infusions of therapeutic doses of beta 2-adrenoceptor agonists salbutamol and rimiterol have been determined in four healthy male subjects. There were dose-related increases in plasma glucose, renin activity, serum insulin and heart rate, and significant hyperlactataemia and ketonaemia. There were dose-related decreases in plasma potassium, phosphate and corticosteroids and significant hypocalcaemia and hypomagnesaemia. The effects of equivalent molar amounts of salbutamol and rimiterol were similar. Whichever drug is used, special care is required with patients who may have abnormal glucose tolerance, potassium depletion, or be predisposed to lactic acidosis. Rimiterol may be preferable for infusion because of its short plasma half-life. [ABSTRACT FROM AUTHOR]
- Published
- 1980
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14. The Flomasta
- Author
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Hillard Ek and Jones Pl
- Subjects
Ventilators, Mechanical ,business.industry ,Airway Resistance ,Anesthesia, General ,law.invention ,Anesthesiology and Pain Medicine ,Volume (thermodynamics) ,Control theory ,law ,Control system ,Ventilation (architecture) ,Humans ,Medicine ,Inspired gas ,business ,Reservoir bag - Abstract
A new ventilator for use during anaesthesia is described. It operates as a minute-volume divider and derives its power from the energy stored in a distended reservoir bag. The unit is autoclavable, suitable for use with explosive anaesthetics and has a rational control system which avoids many of the hazards associated with other ventilators when the mode of ventilation is changed. The nature of the inspired gas mixture is known accurately because the internal volume of the ventilator is small and the system is non-rebreathing. The design of the exhaust system facilitates ventilation monitoring, the use of positive end-expiratory pressure and connection to ducted pollution-control systems.
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- 1977
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15. Positron Evaluation of Hydrogen in a 17 Nickel Maraging Steel
- Author
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Horstman, R, primary, Peters, KA, additional, Meltzer, RL, additional, Vieth, MB, additional, Moore, KD, additional, Cocks, FH, additional, and Jones, PL, additional
- Published
- 1983
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16. A Positron Study of the Quench and Tempering Process in AISI 4340 Steel
- Author
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Kleinberg, AS, primary, Meltzer, RL, additional, Schroeder, JR, additional, Benzing, B, additional, Vieth, MB, additional, Greene, K, additional, Szostek, MT, additional, Moore, KD, additional, and Jones, PL, additional
- Published
- 1985
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17. Microcomputer controlled growth of zinc selenide on gallium arsenide using molecular beam epitaxy
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Cooper, AJ, primary, Sahin, AS, additional, Jones, PL, additional, King, D, additional, and Moore, D, additional
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- 1984
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18. Observation of vapour species concentration during the growth of single crystal zinc selenide films by molecular beam epitaxy
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Sahin, AS, primary, Jones, PL, additional, King, D, additional, and Moore, D, additional
- Published
- 1987
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19. A Positron Study of the Quench and Tempering Process in AISI 4340 Steel
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Moore, KD and Jones, PL
- Abstract
Dopper broadening measurements of the gamma-ray spectra produced by positron annihilation have been made on an AISI 4340 (Unified Numbering System [UNS] G43400) steel as a function of both isochronal tempering over the temperature range of 150 to 700°C and isothermal tempering at 250°C for times ranging from 1 to 1100 min. Changes in the positron annihilation line shape parameter Sare correlated with the corresponding structural transformations that accompany tempering of the as-quenched steel. Of particular significance is the increase in the Sparameter in the temper embrittlement regime. This increase in Sparameter is postulated to be related to the precipitation of a transition iron carbide that alters the defect structure of the surrounding ferrite phase.
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- 1985
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20. Positron Evaluation of Hydrogen in a 17 Nickel Maraging Steel
- Author
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Moore, KD, Cocks, FH, and Jones, PL
- Abstract
Doppler broadening measurements of the γ-ray emmision from positron annihilations have been made on a 17 nickel maraging steel, heat treated to Rockwell hardness, C Scale 49, and subsequently cathodically charged with hydrogen. Changes in the positron annihilation γ-ray spectra were measured using a line shape parameter (S) based on the ratio of central to total spectra area. The recovery of the Sparameter as a function of time after hydrogen charging is correlated with hydrogen egress from the metal. The observed sensitivity of this Doppler broadening positron annihilation technique to hydrogen content is attributed to hydrogen compensation of lattice defects (dislocations) in the maraging steel.
- Published
- 1983
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21. They'll have questions... will you have answers?
- Author
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Jones PL
- Published
- 2010
22. Impact of acute exercise on performance and physiological stress during simulated firefighter occupational tasks.
- Author
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Agostinelli PJ, Bordonie NC, Robbins AM, Jones PL, Reagan LF, Mobley CB, Miller MW, Murrah WM, and Sefton JM
- Subjects
- Humans, Adult, Male, Female, Body Temperature physiology, Task Performance and Analysis, Young Adult, Firefighters, Exercise physiology, Heart Rate physiology, Stress, Physiological
- Abstract
We aimed to determine how a bout of resistance or aerobic exercise impacts physiological responses and performance during firefighting occupational tasks. Thirty-two non-firefighters completed two baseline assessments and three trials: resistance exercise (RE), aerobic exercise (AE), or a rested control (CON). Trials were followed by an occupational task assessment (OTA; four rounds of 10 deadlifts (38.6-61.4 kg) and 0.24-km 40lb-sandbag carry) in an environmental chamber (35 °C/50% humidity) while wearing standard municipal firefighter gear. Time to complete by condition was not statistically different (CON: 18.9 ± 4.4, AE: 20.0 ± 3.6, RE: 20.2 ± 5.0 min; p = 0.16). During the OTA average heart rate (CON: 149 ± 16, AE: 166 ± 12, RE: 160 ± 13 bpm; p < 0.01), estimated core temperature (CON: 37.6 ± 0.4, AE: 38.7 ± 0.3, RE: 38.4 ± 0.5 °C; p < 0.01), and skin temperature (CON: 36.3 ± 0.5, AE: 37.5 ± 0.6, RE: 36.9 ± 0.9 °C; p < 0.01) were elevated following AE and RE compared to CON, and higher following AE compared to RE. Our findings suggest job performance may not be impacted, although physiological stress during the tasks may be elevated, following on-shift exercise, and more prominently following aerobic exercise., Competing Interests: Declarations. Competing interests: The authors declare no competing interests. Consent to participate: Informed consent was obtained from all individual participants included in the study. Ethical approval: The study was conducted in accordance with the Declaration of Helsinki and approved by the Institutional Review Board (or Ethics Committee) of Auburn University (protocol code #22–149 MR 2205, 05/05/2022)., (© 2024. The Author(s).)
- Published
- 2024
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23. Acute exercise impacts heart rate variability but not cognitive flexibility during subsequent simulated firefighter occupational tasks.
- Author
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Agostinelli PJ, Bordonie NC, Linder BA, Robbins AM, Jones PL, Reagan LF, Mobley CB, Miller MW, Murrah WM, and Sefton JM
- Abstract
Purpose: Acute exercise can transiently enhance cognitive flexibility. The cognitive demand of firefighters makes it relevant to understand if on-shift exercise could produce similar improvements in cognitive performance during subsequent occupational tasks. Metrics of heart rate variability (HRV), such as time- and frequency-domain outcomes, may shed light upon the influence exercise has on cognition, as they discern information related to cardiac autonomic (sympathetic/parasympathetic) function. We aimed to determine if acute resistance and aerobic exercise impact cognitive flexibility during occupational tasks and its relation to HRV., Methods: 32 participants completed a baseline Wisconsin Card Sorting Task (WCST) and three experimental trials: resistance exercise (RE), aerobic exercise (AE), or a rested control (CON). An occupational task assessment (OTA) including four rounds of 10 deadlifts and a 0.15-mile sandbag carry in an environmental chamber (35 °C/50% humidity) was completed after each trial. The second round was followed by the WCST. Repeated measures ANOVAs were used to analyze differences by condition., Results: For the WCST, total, perseverative, and non-perseverative errors did not differ (ps > 0.39). Time-domain HRV metrics were not different (ps > 0.05). All frequency-domain metrics, other than low-frequency power, were not different (ps > 0.24). Low-frequency power was lower based on condition (p = 0.03). Post hoc analysis showed low-frequency power was lower following AE compared to RE and CON., Conclusion: Results suggest an acute bout of on-shift aerobic or resistance exercise may not impact cognitive flexibility during subsequent simulated occupational tasks, despite depressed metrics of heart rate variability following aerobic exercise., Competing Interests: Declarations Ethical approval Approval was obtained from the ethics committee of XX University (protocol code #22-479 AR 2211) and all study procedures adhere to the tenets of the Declaration of Helsinki. Conflict of interest The authors report no conflicts of interest., (© 2024. The Author(s).)
- Published
- 2024
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24. Have a Little Heart (or Not): Highly Minimized Skeletal Muscle Regulatory Cassettes with Low or No Activity in the Heart.
- Author
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Himeda CL, Jones TI, and Jones PL
- Subjects
- Animals, Humans, Mice, Promoter Regions, Genetic, Transgenes, Enhancer Elements, Genetic, Muscle, Skeletal metabolism, Dependovirus genetics, Myocardium metabolism, Genetic Therapy methods, Genetic Vectors genetics
- Abstract
Adeno-associated virus-mediated gene therapies for certain muscle disorders require regulatory cassettes that provide high-level, striated muscle-specific activity. However, cardiotoxicity has emerged as a serious concern in clinical trials for Duchenne muscular dystrophy and X-linked myotubular myopathy. While this may be caused by systemic inflammatory effects of the treatment, high transgene expression in the heart may also play a role. Thus, certain muscle disorders may require a modulated level of therapeutic expression in the heart, while others may not require any cardiac expression at all. Additionally, the size of some cargos requires regulatory cassettes to be small enough that large cDNAs and other therapeutic payloads can be accommodated. Thus, we have performed enhancer/promoter optimization to develop highly minimized regulatory cassettes that are active in skeletal muscles, with either low or no detectable activity in cardiac muscle. Our No-heart (NH) cassette is active in most skeletal muscles, but exhibits only very low activity in extensor digitorum longus (EDL), soleus, and diaphragm, and no activity in the heart. By contrast, our Have a Little Heart (HLH) cassette displays high activity in most skeletal muscles, comparable to the ∼800-bp CK8 cassette, with increased activity in EDL, soleus, and diaphragm, and low activity in the heart. Due to their small size, these cassettes can be used in therapeutic strategies with both flexible ( e.g., antisense) and stringent ( e.g., CRISPR/Cas or bicistronic) size limitations. Thus, our new cassettes may be useful for gene therapies of muscle disorders in which the need for low or almost no expression in cardiac muscle would outweigh the need for high levels of therapeutic product in certain skeletal muscles.
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- 2024
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25. Muscle eosinophilia is a hallmark of chronic disease in facioscapulohumeral muscular dystrophy.
- Author
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Nunes AM, Ramirez MM, Garcia-Collazo E, Jones TI, and Jones PL
- Subjects
- Animals, Mice, Humans, Chemokine CCL11 genetics, Chemokine CCL11 metabolism, Chronic Disease, MicroRNAs genetics, MicroRNAs metabolism, Muscular Dystrophy, Facioscapulohumeral genetics, Muscular Dystrophy, Facioscapulohumeral metabolism, Muscular Dystrophy, Facioscapulohumeral pathology, Homeodomain Proteins genetics, Homeodomain Proteins metabolism, Disease Models, Animal, Muscle, Skeletal metabolism, Muscle, Skeletal pathology, Eosinophilia genetics, Eosinophilia pathology, Eosinophilia immunology
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD) is a progressive myopathy caused by the aberrant increased expression of the DUX4 retrogene in skeletal muscle cells. The DUX4 gene encodes a transcription factor that functions in zygotic genome activation and then is silenced in most adult somatic tissues. DUX4 expression in FSHD disrupts normal muscle cell function; however, the downstream pathogenic mechanisms are still unclear. Histologically, FSHD affected muscles show a characteristic dystrophic phenotype that is often accompanied by a pronounced immune cell infiltration, but the role of the immune system in FSHD is not understood. Previously, we used ACTA1;FLExDUX4 FSHD-like mouse models varying in severity as discovery tools to identify increased Interleukin 6 and microRNA-206 levels as serum biomarkers for FSHD disease severity. In this study, we use the ACTA1;FLExDUX4 chronic FSHD-like mouse model to provide insight into the immune response to DUX4 expression in skeletal muscles. We demonstrate that these FSHD-like muscles are enriched with the chemoattractant eotaxin and the cytotoxic eosinophil peroxidase, and exhibit muscle eosinophilia. We further identified muscle fibers with positive staining for eosinophil peroxidase in human FSHD muscle. Our data supports that skeletal muscle eosinophilia is a hallmark of FSHD pathology., (© The Author(s) 2024. Published by Oxford University Press.)
- Published
- 2024
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26. Regional and bilateral MRI and gene signatures in facioscapulohumeral dystrophy: implications for clinical trial design and mechanisms of disease progression.
- Author
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Wong CJ, Friedman SD, Snider L, Bennett SR, Jones TI, Jones PL, Shaw DWW, Blemker SS, Riem L, DuCharme O, Lemmers RJFL, van der Maarel SM, Wang LH, Tawil R, Statland JM, and Tapscott SJ
- Subjects
- Humans, Homeodomain Proteins genetics, Clinical Trials as Topic, Muscle, Skeletal metabolism, Magnetic Resonance Imaging, Biomarkers metabolism, Disease Progression, Muscular Dystrophy, Facioscapulohumeral diagnostic imaging, Muscular Dystrophy, Facioscapulohumeral genetics, Muscular Dystrophy, Facioscapulohumeral metabolism
- Abstract
Identifying the aberrant expression of DUX4 in skeletal muscle as the cause of facioscapulohumeral dystrophy (FSHD) has led to rational therapeutic development and clinical trials. Several studies support the use of MRI characteristics and the expression of DUX4-regulated genes in muscle biopsies as biomarkers of FSHD disease activity and progression. We performed lower-extremity MRI and muscle biopsies in the mid-portion of the tibialis anterior (TA) muscles bilaterally in FSHD subjects and validated our prior reports of the strong association between MRI characteristics and expression of genes regulated by DUX4 and other gene categories associated with FSHD disease activity. We further show that measurements of normalized fat content in the entire TA muscle strongly predict molecular signatures in the mid-portion of the TA, indicating that regional biopsies can accurately measure progression in the whole muscle and providing a strong basis for inclusion of MRI and molecular biomarkers in clinical trial design. An unanticipated finding was the strong correlations of molecular signatures in the bilateral comparisons, including markers of B-cells and other immune cell populations, suggesting that a systemic immune cell infiltration of skeletal muscle might have a role in disease progression., (© The Author(s) 2024. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2024
- Full Text
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27. Inter-colony variation in predation, mercury burden and adult survival in a declining seabird.
- Author
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Calvert AM, Gutowsky SE, Fifield DA, Burgess NM, Bryant R, Fraser GS, Gjerdrum C, Hedd A, Jones PL, Mauck RA, McFarlane Tranquilla L, Montevecchi WA, Pollet IL, Ronconi RA, Rock JC, Russell J, Wilhelm SI, Wong SNP, and Robertson GJ
- Subjects
- Animals, Predatory Behavior, Birds, Canada, Mercury analysis
- Abstract
Migratory species with disjunct and localized breeding distributions, including many colonial marine birds, pose challenges for management and conservation as their dynamics are shaped by both broad oceanographic changes and specific factors affecting individual breeding colonies. We compare six colonies of the declining Leach's storm-petrel, Hydrobates leucorhous, across their core range in Atlantic Canada using standard capture-mark-recapture methods to estimate annual survival of individually marked populations of breeding adults. Over the period analysed (5-20 years per colony; 2003-2022), mean annual survival varied among colonies (0.81-0.88) and annually (process error σ ranging from 0.01 to 0.09), though annual fluctuations were not synchronous across colonies. Two colonies with limited natural predation showed higher survival, and there was a decline in survival with increasing colony-specific total mercury burden. Our work shows that colony-specific pressures and regional contaminant burdens are potentially important contributors to current population declines, and highlights the importance of monitoring demographic rates at multiple sites for species that congregate at key life-history stages., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Greg Robertson reports financial support and administrative support were provided by Environment and Climate Change Canada. Greg Robertson reports financial support was provided by Environmental Studies Research Fund. The Environmental Studies Research Fund (ESRF: www.esrfunds.org) are monies from Government of Canada levies on the oil and gas industry. The ESRF are directed by a 12-member Management Board which has representation from the federal government (including ECCC), the Canada-Newfoundland and Labrador Offshore Petroleum Board, the Canada-Nova Scotia Offshore Petroleum Board, the oil and gas industry, and the general public. The ESRF is administered by a secretariat within Natural Resources Canada. - GJR on behalf of all ECCC authors., (Crown Copyright © 2023. Published by Elsevier B.V. All rights reserved.)
- Published
- 2024
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28. Compound-Specific Behavioral and Enzymatic Resistance to Toxic Milkweed Cardenolides in a Generalist Bumblebee Pollinator.
- Author
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Jones PL, Martin KR, Prachand SV, Hastings AP, Duplais C, and Agrawal AA
- Subjects
- Bees, Animals, Cardenolides toxicity, Cardenolides metabolism, Plant Nectar, Ouabain metabolism, Drosophila melanogaster, Sodium-Potassium-Exchanging ATPase metabolism, Asclepias metabolism, Butterflies metabolism
- Abstract
Plant secondary metabolites that defend leaves from herbivores also occur in floral nectar. While specialist herbivores often have adaptations providing resistance to these compounds in leaves, many social insect pollinators are generalists, and therefore are not expected to be as resistant to such compounds. The milkweeds, Asclepias spp., contain toxic cardenolides in all tissues including floral nectar. We compared the concentrations and identities of cardenolides between tissues of the North American common milkweed Asclepias syriaca, and then studied the effect of the predominant cardenolide in nectar, glycosylated aspecioside, on an abundant pollinator. We show that a generalist bumblebee, Bombus impatiens, a common pollinator in eastern North America, consumes less nectar with experimental addition of ouabain (a standard cardenolide derived from Apocynacid plants native to east Africa) but not with addition of glycosylated aspecioside from milkweeds. At a concentration matching that of the maximum in the natural range, both cardenolides reduced activity levels of bees after four days of consumption, demonstrating toxicity despite variation in behavioral deterrence (i.e., consumption). In vitro enzymatic assays of Na
+ /K+ -ATPase, the target site of cardenolides, showed lower toxicity of the milkweed cardenolide than ouabain for B. impatiens, indicating that the lower deterrence may be due to greater tolerance to glycosylated aspecioside. In contrast, there was no difference between the two cardenolides in toxicity to the Na+ /K+ -ATPase from a control insect, the fruit fly Drosophila melanogaster. Accordingly, this work reveals that even generalist pollinators such as B. impatiens may have adaptations to reduce the toxicity of specific plant secondary metabolites that occur in nectar, despite visiting flowers from a wide variety of plants over the colony's lifespan., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2023
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29. Human DUX4 and porcine DUXC activate similar early embryonic programs in pig muscle cells: implications for preclinical models of FSHD.
- Author
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Nip Y, Bennett SR, Smith AA, Jones TI, Jones PL, and Tapscott SJ
- Subjects
- Humans, Animals, Mice, Swine, Homeodomain Proteins genetics, Homeodomain Proteins metabolism, Muscle Cells metabolism, Muscle, Skeletal metabolism, Muscular Dystrophy, Facioscapulohumeral metabolism
- Abstract
Human DUX4 and its mouse ortholog Dux are normally expressed in the early embryo-the 4-cell or 2-cell cleavage stage embryo, respectively-and activate a portion of the first wave of zygotic gene expression. DUX4 is epigenetically suppressed in nearly all somatic tissue, whereas facioscapulohumeral dystrophy (FSHD)-causing mutations result in its aberrant expression in skeletal muscle, transcriptional activation of the early embryonic program and subsequent muscle pathology. Although DUX4 and Dux both activate an early totipotent transcriptional program, divergence of their DNA binding domains limits the use of DUX4 expressed in mice as a preclinical model for FSHD. In this study, we identify the porcine DUXC messenger ribonucleic acid expressed in early development and show that both pig DUXC and human DUX4 robustly activate a highly similar early embryonic program in pig muscle cells. These results support further investigation of pig preclinical models for FSHD., (© The Author(s) 2023. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.)
- Published
- 2023
- Full Text
- View/download PDF
30. Validation of the association between MRI and gene signatures in facioscapulohumeral dystrophy muscle: implications for clinical trial design.
- Author
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Wong CJ, Friedman SD, Snider L, Bennett SR, Jones TI, Jones PL, Shaw DWW, Blemker SS, Riem L, DuCharme O, Lemmers RJFL, van der Maarel SRM, Wang LH, Tawil R, Statland JM, and Tapscott SJ
- Abstract
Identifying the aberrant expression of DUX4 in skeletal muscle as the cause of facioscapulohumeral dystrophy (FSHD) has led to rational therapeutic development and clinical trials. Several studies support the use of MRI characteristics and the expression of DUX4-regulated genes in muscle biopsies as biomarkers of FSHD disease activity and progression, but reproducibility across studies needs further validation. We performed lower-extremity MRI and muscle biopsies in the mid-portion of the tibialis anterior (TA) muscles bilaterally in FSHD subjects and validated our prior reports of the strong association between MRI characteristics and expression of genes regulated by DUX4 and other gene categories associated with FSHD disease activity. We further show that measurements of normalized fat content in the entire TA muscle strongly predict molecular signatures in the mid-portion of the TA. Together with moderate-to-strong correlations of gene signatures and MRI characteristics between the TA muscles bilaterally, these results suggest a whole muscle model of disease progression and provide a strong basis for inclusion of MRI and molecular biomarkers in clinical trial design.
- Published
- 2023
- Full Text
- View/download PDF
31. Factors influencing mercury levels in Leach's storm-petrels at northwest Atlantic colonies.
- Author
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Pollet IL, McFarlane-Tranquilla L, Burgess NM, Diamond AW, Gjerdrum C, Hedd A, Hoeg R, Jones PL, Mauck RA, Montevecchi WA, Pratte I, Ronconi RA, Shutler D, Wilhelm SI, and Mallory ML
- Subjects
- Humans, Animals, Birds, Animals, Wild, Canada, Environmental Monitoring, Mercury analysis, Methylmercury Compounds
- Abstract
Mercury (Hg) is a globally distributed heavy metal, with negative effects on wildlife. Its most toxic form, methylmercury (MeHg), predominates in aquatic systems. Levels of MeHg in marine predators can vary widely among individuals and populations. Leach's storm-petrels (Hydrobates leucorhous) have elevated levels of Hg but the role of Hg in storm-petrel population declines is unknown. In this study, we used egg and blood samples to study variation in Hg exposure among several northwest Atlantic colonies during breeding seasons, thereby evaluating relative toxicity risk within and among colonies. Total mercury (THg) concentrations were higher with increasing colony latitude, and were more pronounced in blood than in eggs. THg concentrations in blood were mostly associated with low toxicity risk in birds from the southern colonies and moderate risks in birds from the northern colonies; however, those values did not affect hatching or fledging success. THg concentrations in both eggs and blood were positively correlated with δ
34 S, emphasizing the role of sulfate-reducing bacteria in methylation of THg acquired through marine food webs, which is consistent with enriched δ34 S profiles. By associating tracking data from foraging trips with THg from blood, we determined that blood THg levels were higher when storm-petrel's intensive search locations were over deeper waters. We conclude that spatial variation in THg concentrations in Leach's storm-petrels is attributable to differences in ocean depth at foraging locations, both at individual and colony levels. Differences in diet among colonies observed previously are the most likely cause for observed blood THg differences. As one of the few pelagic seabird species breeding in Atlantic Canada, with limited overlap in core foraging areas among colonies, Leach's storm-petrels can be used as biomonitors for less sampled offshore pelagic regions. The global trend in Hg emissions combined with legacy levels warrant continued monitoring for toxicity effects in seabirds., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2023
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32. Female and male Leach's Storm Petrels ( Hydrobates leucorhous ) pursue different foraging strategies during the incubation period.
- Author
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Mauck RA, Pratte I, Hedd A, Pollet IL, Jones PL, Montevecchi WA, Ronconi RA, Gjerdrum C, Adrianowyscz S, McMahon C, Acker H, Taylor LU, McMahon J, Dearborn DC, Robertson GJ, and McFarlane Tranquilla LA
- Abstract
Reproduction in procellariiform birds is characterized by a single egg clutch, slow development, a long breeding season and obligate biparental care. Female Leach's Storm Petrels Hydrobates leucorhous , nearly monomorphic members of this order, produce eggs that are between 20 and 25% of adult body weight. We tested whether female foraging behaviour differs from male foraging behaviour during the ~ 44-day incubation period across seven breeding colonies in the Northwest Atlantic. Over six breeding seasons, we used a combination of Global Positioning System and Global Location Sensor devices to measure characteristics of individual foraging trips during the incubation period. Females travelled significantly greater distances and went farther from the breeding colony than did males on individual foraging trips. For both sexes, the longer the foraging trip, the greater the distance. Independent of trip duration, females travelled farther, and spent a greater proportion of their foraging trips prospecting widely as defined by behavioural categories derived from a Hidden Markov Model. For both sexes, trip duration decreased with date. Sex differences in these foraging metrics were apparently not a consequence of morphological differences or spatial segregation. Our data are consistent with the idea that female foraging strategies differed from male foraging strategies during incubation in ways that would be expected if females were still compensating for egg formation., Competing Interests: Conflicts of Interest: None.
- Published
- 2023
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33. Perspective: Scientific Workforce Diversity and Its Impact on Aging Research.
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Jones PL, Sauma S, and Bernard MA
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- Workforce, Geroscience
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- 2022
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34. Human iPSC-derived astrocytes generated from donors with globoid cell leukodystrophy display phenotypes associated with disease.
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Lieberman R, Cortes LK, Gao G, Park H, Wang B, Jones PL, Hunter RB, Leonard JP, and Barker RH Jr
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- Animals, Astrocytes metabolism, Disease Models, Animal, Galactosylceramidase genetics, Galactosylceramidase metabolism, Humans, Phenotype, Psychosine metabolism, Induced Pluripotent Stem Cells metabolism, Leukodystrophy, Globoid Cell
- Abstract
Globoid cell leukodystrophy (Krabbe disease) is a fatal neurodegenerative, demyelinating disease caused by dysfunctional activity of galactosylceramidase (GALC), leading to the accumulation of glycosphingolipids including psychosine. While oligodendrocytes have been extensively studied due to their high levels of GALC, the contribution of astrocytes to disease pathogenesis remains to be fully elucidated. In the current study, we generated induced pluripotent stem cells (iPSCs) from two donors with infantile onset Krabbe disease and differentiated them into cultures of astrocytes. Krabbe astrocytes recapitulated many key findings observed in humans and rodent models of the disease, including the accumulation of psychosine and elevated expression of the pro-inflammatory cytokine IL-6. Unexpectedly, Krabbe astrocytes had higher levels of glucosylceramide and ceramide, and displayed compensatory changes in genes encoding glycosphingolipid biosynthetic enzymes, suggesting a shunting away from the galactosylceramide and psychosine pathway. In co-culture, Krabbe astrocytes negatively impacted the survival of iPSC-derived human neurons while enhancing survival of iPSC-derived human microglia. Substrate reduction approaches targeting either glucosylceramide synthase or serine palmitoyltransferase to reduce the sphingolipids elevated in Krabbe astrocytes failed to rescue their detrimental impact on neuron survival. Our results suggest that astrocytes may contribute to the progression of Krabbe disease and warrant further exploration into their role as therapeutic targets., Competing Interests: I have read the journal’s policy and the authors of this manuscript have the following competing interests: At the time the research was conducted, all authors were employed by Sanofi. GG, HP, and BW are currently employed by Sanofi. This does not alter our adherence to PLOS ONE policies on sharing data and materials.
- Published
- 2022
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35. Long-term memory in frog-eating bats.
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Dixon MM, Jones PL, Ryan MJ, Carter GG, and Page RA
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- Animals, Anura physiology, Memory, Long-Term, Predatory Behavior physiology, Sound, Chiroptera physiology, Echolocation physiology
- Abstract
Long-term memory has clear advantages for animals but also has neurological and behavioral costs
1-3 . Encoding memories is metabolically expensive1 . Older memories can interfere with retrieval of more recent memories3 , prolong decision-making and reduce cognitive flexibility2 , 3 . Given these opposing selection pressures, understanding how long memories last can shed light on how memory enhances or constrains animals' abilities to exploit their niches. Although testing memory retention in wild animals is difficult, it is important because captive conditions do not reflect the complex cognitive demands of wild environments, and long-term captivity changes the brain4 (Data S1A). Here, we trained wild-caught frog-eating bats (Trachops cirrhosus) to find prey by flying to a novel acoustic cue. After they learned the rewarded sound, we released them back into the wild, and then re-captured some of them one to four years later. When re-tested, all eight 'experienced' bats that previously learned the novel prey sounds flew to those sounds within seconds, whereas 17 naïve bats tested with the same sounds showed weak responses. Experienced bats also showed behavior indicating generalization of memories between novel sounds and rewards over time. The frog-eating bat's remarkably long memory indicates that an ability to remember rarely encountered prey may be advantageous for this predator and suggests hitherto unknown cognitive abilities in bats., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2022 Elsevier Inc. All rights reserved.)- Published
- 2022
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36. FSHD Therapeutic Strategies: What Will It Take to Get to Clinic?
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Himeda CL and Jones PL
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD) is arguably one of the most challenging genetic diseases to understand and treat. The disease is caused by epigenetic dysregulation of a macrosatellite repeat, either by contraction of the repeat or by mutations in silencing proteins. Both cases lead to chromatin relaxation and, in the context of a permissive allele, pathogenic misexpression of DUX4 in skeletal muscle. The complex nature of the locus and the fact that FSHD is a toxic, gain-of-function disease present unique challenges for the design of therapeutic strategies. There are three major DUX4-targeting avenues of therapy for FSHD: small molecules, oligonucleotide therapeutics, and CRISPR-based approaches. Here, we evaluate the preclinical progress of each avenue, and discuss efforts being made to overcome major hurdles to translation.
- Published
- 2022
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37. Cross-sectional Neuromuscular Phenotyping Study of Patients With Arhinia With SMCHD1 Variants.
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Mohassel P, Chang N, Inoue K, Delaney A, Hu Y, Donkervoort S, Saade D, Billioux BJ, Meader B, Volochayev R, Konersman CG, Kaindl AM, Cho CH, Russell B, Rodriguez A, Foster KW, Foley AR, Moore SA, Jones PL, Bonnemann CG, Jones T, and Shaw ND
- Subjects
- Cross-Sectional Studies, Female, Homeodomain Proteins genetics, Humans, Male, Phenotype, Chromosomal Proteins, Non-Histone genetics, Muscular Dystrophy, Facioscapulohumeral diagnostic imaging, Muscular Dystrophy, Facioscapulohumeral genetics
- Abstract
Background and Objectives: Facioscapulohumeral muscular dystrophy type 2 (FSHD2) and arhinia are 2 distinct disorders caused by pathogenic variants in the same gene: SMCHD1 . The mechanism underlying this phenotypic divergence remains unclear. In this study, we characterize the neuromuscular phenotype of individuals with arhinia caused by SMCHD1 variants and analyze their complex genetic and epigenetic criteria to assess their risk for FSHD2., Methods: Eleven individuals with congenital nasal anomalies, including arhinia, nasal hypoplasia, or anosmia, underwent a neuromuscular examination, genetic testing, muscle ultrasound, and muscle MRI. Risk for FSHD2 was determined by combined genetic and epigenetic analysis of 4q35 haplotype, D4Z4 repeat length, and methylation profile. We also compared expression levels of pathogenic DUX4 mRNA in primary myoblasts or dermal fibroblasts (upon myogenic differentiation or epigenetic transdifferentiation, respectively) in these individuals vs those with confirmed FSHD2., Results: Among the 11 individuals with rare, pathogenic, heterozygous missense variants in exons 3-11 of SMCHD1, only a subset (n = 3/11; 1 male, 2 female; age 25-51 years) met the strict genetic and epigenetic criteria for FSHD2 (D4Z4 repeat unit length <21 in cis with a 4qA haplotype and D4Z4 methylation <30%). None of the 3 individuals had typical clinical manifestations or muscle imaging findings consistent with FSHD2. However, the patients with arhinia meeting the permissive genetic and epigenetic criteria for FSHD2 displayed some DUX4 expression in dermal fibroblasts under the epigenetic de-repression by drug treatment and in the primary myoblasts undergoing myogenic differentiation., Discussion: In this cross-sectional study, we identified patients with arhinia who meet the full genetic and epigenetic criteria for FSHD2 and display the molecular hallmark of FSHD- DUX4 de-repression and expression in vitro-but who do not manifest with the typical clinicopathologic phenotype of FSHD2. The distinct dichotomy between FSHD2 and arhinia phenotypes despite an otherwise poised DUX4 locus implies the presence of novel disease-modifying factors that seem to operate as a switch, resulting in one phenotype and not the other. Identification and further understanding of these disease-modifying factors will provide valuable insight with therapeutic implications for both diseases., (Written work prepared by employees of the Federal Government as part of their official duties is, under the U.S. Copyright Act, a “work of the United States Government” for which copyright protection under Title 17 of the United States Code is not available. As such, copyright does not extend to the contributions of employees of the Federal Government.)
- Published
- 2022
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38. Identification of Serum Interleukin 6 Levels as a Disease Severity Biomarker in Facioscapulohumeral Muscular Dystrophy.
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Gros M, Nunes AM, Daoudlarian D, Pini J, Martinuzzi E, Barbosa S, Ramirez M, Puma A, Villa L, Cavalli M, Grecu N, Garcia J, Siciliano G, Solé G, Juntas-Morales R, Jones PL, Jones T, Glaichenhaus N, and Sacconi S
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Animals, Biomarkers, Disease Models, Animal, Female, Humans, Male, Mice, Middle Aged, Retrospective Studies, Severity of Illness Index, Young Adult, Interleukin-6 blood, Muscular Dystrophy, Facioscapulohumeral blood, Muscular Dystrophy, Facioscapulohumeral diagnosis
- Abstract
Background: Facioscapulohumeral muscular dystrophy (FSHD) is one of the most common myopathies in adults, displaying a progressive, frequently asymmetric involvement of a typical muscles' pattern. FSHD is associated with epigenetic derepression of the polymorphic D4Z4 repeat on chromosome 4q, leading to DUX4 retrogene toxic expression in skeletal muscles. Identifying biomarkers that correlate with disease severity would facilitate clinical management and assess potential FSHD therapeutics' efficacy., Objectives: This study purpose was to analyze serum cytokines to identify potential biomarkers in a large cohort of adult patients with FSHD., Methods: We retrospectively measured the levels of 20 pro-inflammatory and regulatory cytokines in sera from 100 genetically confirmed adult FSHD1 patients. Associations between cytokine concentrations and various clinical scores were investigated. We then measured serum and muscle interleukin 6 (IL-6) levels in a validated FSHD-like mouse model, ranging in severity and DUX4 expression., Results: IL-6 was identified as the only cytokine with a concentration correlating with several clinical severity and functional scores, including Clinical Severity Score, Manual Muscle Testing sum score, Brooke and Vignos scores. Further, FSHD patients displayed overall IL-6 levels more than twice high as control, and patients with milder phenotypes exhibited lower IL-6 serum concentration than those with severe muscular weakness. Lastly, an FSHD-like mouse model analysis confirmed that IL-6 levels positively correlate with disease severity and DUX4 expression., Conclusions: Serum IL-6, therefore, shows promise as a serum biomarker of FSHD severity in a large cohort of FSHD1 adult patients.
- Published
- 2022
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39. Precise Epigenetic Analysis Using Targeted Bisulfite Genomic Sequencing Distinguishes FSHD1, FSHD2, and Healthy Subjects.
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Gould T, Jones TI, and Jones PL
- Abstract
The true prevalence of facioscapulohumeral muscular dystrophy (FSHD) is unknown due to difficulties with accurate clinical evaluation and the complexities of current genetic diagnostics. Interestingly, all forms of FSHD are linked to epigenetic changes in the chromosome 4q35 D4Z4 macrosatellite, suggesting that epigenetic analysis could provide an avenue for sequence-based FSHD diagnostics. However, studies assessing DNA methylation at the FSHD locus have produced conflicting results; thus, the utility of this technique as an FSHD diagnostic remains controversial. Here, we critically compared two protocols for epigenetic analysis of the FSHD region using bisulfite genomic sequencing: Jones et al., that contends to be individually diagnostic for FSHD1 and FSHD2, and Gaillard et al., that can identify some changes in DNA methylation levels between groups of clinically affected FSHD and healthy subjects, but is not individually diagnostic for any form of FSHD. We performed both sets of assays on the same genetically confirmed samples and showed that this discrepancy was due strictly to differences in amplicon specificity. We propose that the epigenetic status of the FSHD-associated D4Z4 arrays, when accurately assessed, is a diagnostic for genetic FSHD and can readily distinguish between healthy, FSHD1 and FSHD2. Thus, epigenetic diagnosis of FSHD, which can be performed on saliva DNA, will greatly increase accessibility to FSHD diagnostics for populations around the world.
- Published
- 2021
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40. Identification of candidate miRNA biomarkers for facioscapulohumeral muscular dystrophy using DUX4-based mouse models.
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Nunes AM, Ramirez M, Jones TI, and Jones PL
- Subjects
- Animals, Biomarkers metabolism, Homeodomain Proteins genetics, Homeodomain Proteins metabolism, Humans, Mice, Muscle, Skeletal pathology, MicroRNAs genetics, MicroRNAs metabolism, Muscular Dystrophy, Facioscapulohumeral pathology
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD) is caused by misexpression of DUX4 in skeletal myocytes. As DUX4 is the key therapeutic target in FSHD, surrogate biomarkers of DUX4 expression in skeletal muscle are critically needed for clinical trials. Although no natural animal models of FSHD exist, transgenic mice with inducible DUX4 expression in skeletal muscles rapidly develop myopathic phenotypes consistent with FSHD. Here, we established a new, more-accurate FSHD-like mouse model based on chronic DUX4 expression in a small fraction of skeletal myonuclei that develops pathology mimicking key aspects of FSHD across its lifespan. Utilizing this new aged mouse model and DUX4-inducible mouse models, we characterized the DUX4-related microRNA signatures in skeletal muscles, which represent potential biomarkers for FSHD. We found increased expression of miR-31-5p and miR-206 in muscles expressing different levels of DUX4 and displaying varying degrees of pathology. Importantly, miR-206 expression is significantly increased in serum samples from FSHD patients compared with healthy controls. Our data support miR-31-5p and miR-206 as new potential regulators of muscle pathology and miR-206 as a potential circulating biomarker for FSHD. This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2021. Published by The Company of Biologists Ltd.)
- Published
- 2021
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41. Public Health Reports: 2020 in Review.
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Kuzmichev A, Onyejiuwa N, Jones PL, and Dean HD
- Published
- 2021
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42. Targeted epigenetic repression by CRISPR/dSaCas9 suppresses pathogenic DUX4-fl expression in FSHD.
- Author
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Himeda CL, Jones TI, and Jones PL
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD) is caused by incomplete silencing of the disease locus, leading to pathogenic misexpression of DUX4 in skeletal muscle. Previously, we showed that CRISPR inhibition could successfully target and repress DUX4 in FSHD myocytes. However, an effective therapy will require both efficient delivery of therapeutic components to skeletal muscles and long-term repression of the disease locus. Thus, we re-engineered our platform to allow in vivo delivery of more potent epigenetic repressors. We designed an FSHD-optimized regulatory cassette to drive skeletal muscle-specific expression of dCas9 from Staphylococcus aureus fused to HP1α, HP1γ, the MeCP2 transcriptional repression domain, or the SUV39H1 SET domain. Targeting each regulator to the DUX4 promoter/exon 1 increased chromatin repression at the locus, specifically suppressing DUX4 and its target genes in FSHD myocytes and in a mouse model of the disease. Importantly, minimizing the regulatory cassette and using the smaller Cas9 ortholog allowed our therapeutic cassettes to be effectively packaged into adeno-associated virus (AAV) vectors for in vivo delivery. By engineering a muscle-specific epigenetic CRISPR platform compatible with AAV vectors for gene therapy, we have laid the groundwork for clinical use of dCas9-based chromatin effectors in skeletal muscle disorders., Competing Interests: C.L.H., P.L.J., and T.I.J. are listed as inventors on two US patent applications (nos. 62/398801 and 63/011476) pertaining to the use of CRISPR inhibition for FSHD., (© 2020 The Author(s).)
- Published
- 2020
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43. Transgenic mice expressing tunable levels of DUX4 develop characteristic facioscapulohumeral muscular dystrophy-like pathophysiology ranging in severity.
- Author
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Jones TI, Chew GL, Barraza-Flores P, Schreier S, Ramirez M, Wuebbles RD, Burkin DJ, Bradley RK, and Jones PL
- Subjects
- Animals, Homeodomain Proteins metabolism, Male, Mice, Muscle, Skeletal pathology, Muscular Dystrophy, Facioscapulohumeral metabolism, Muscular Dystrophy, Facioscapulohumeral pathology, Transgenes, Up-Regulation, Homeodomain Proteins genetics, Muscle, Skeletal metabolism, Muscular Dystrophy, Facioscapulohumeral genetics, Phenotype
- Abstract
Background: All types of facioscapulohumeral muscular dystrophy (FSHD) are caused by the aberrant activation of the somatically silent DUX4 gene, the expression of which initiates a cascade of cellular events ultimately leading to FSHD pathophysiology. Typically, progressive skeletal muscle weakness becomes noticeable in the second or third decade of life, yet there are many individuals who are genetically FSHD but develop symptoms much later in life or remain relatively asymptomatic throughout their lives. Conversely, FSHD may clinically present prior to 5-10 years of age, ultimately manifesting as a severe early-onset form of the disease. These phenotypic differences are thought to be due to the timing and levels of DUX4 misexpression., Methods: FSHD is a dominant gain-of-function disease that is amenable to modeling by DUX4 overexpression. We have recently created a line of conditional DUX4 transgenic mice, FLExDUX4, that develop a myopathy upon induction of human DUX4-fl expression in skeletal muscle. Here, we use the FLExDUX4 mouse crossed with the skeletal muscle-specific and tamoxifen-inducible line ACTA1-MerCreMer to generate a highly versatile bi-transgenic mouse model with chronic, low-level DUX4-fl expression and cumulative mild FSHD-like pathology that can be reproducibly induced to develop more severe pathology via tamoxifen induction of DUX4-fl in skeletal muscles., Results: We identified conditions to generate FSHD-like models exhibiting reproducibly mild, moderate, or severe DUX4-dependent pathophysiology and characterized progression of pathology. We assayed DUX4-fl mRNA and protein levels, fitness, strength, global gene expression, and histopathology, all of which are consistent with an FSHD-like myopathic phenotype. Importantly, we identified sex-specific and muscle-specific differences that should be considered when using these models for preclinical studies., Conclusions: The ACTA1-MCM;FLExDUX4 bi-transgenic mouse model has mild FSHD-like pathology and detectable muscle weakness. The onset and progression of more severe DUX4-dependent pathologies can be controlled via tamoxifen injection to increase the levels of mosaic DUX4-fl expression, providing consistent and readily screenable phenotypes for assessing therapies targeting DUX4-fl mRNA and/or protein and are useful to investigate certain conserved downstream FSHD-like pathophysiology. Overall, this model supports that DUX4 expression levels in skeletal muscle directly correlate with FSHD-like pathology by numerous metrics.
- Published
- 2020
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44. Interpretation of the Epigenetic Signature of Facioscapulohumeral Muscular Dystrophy in Light of Genotype-Phenotype Studies.
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Nikolic A, Jones TI, Govi M, Mele F, Maranda L, Sera F, Ricci G, Ruggiero L, Vercelli L, Portaro S, Villa L, Fiorillo C, Maggi L, Santoro L, Antonini G, Filosto M, Moggio M, Angelini C, Pegoraro E, Berardinelli A, Maioli MA, D'Angelo G, Di Muzio A, Siciliano G, Tomelleri G, D'Esposito M, Della Ragione F, Brancaccio A, Piras R, Rodolico C, Mongini T, Magdinier F, Salsi V, Jones PL, and Tupler R
- Subjects
- Alleles, Biological Variation, Population, DNA Methylation, Family, Genetic Predisposition to Disease, Humans, Pedigree, ROC Curve, Epigenesis, Genetic, Epigenomics methods, Genetic Association Studies, Genotype, Muscular Dystrophy, Facioscapulohumeral diagnosis, Muscular Dystrophy, Facioscapulohumeral genetics, Phenotype
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD) is characterized by incomplete penetrance and intra-familial clinical variability. The disease has been associated with the genetic and epigenetic features of the D4Z4 repetitive elements at 4q35. Recently, D4Z4 hypomethylation has been proposed as a reliable marker in the FSHD diagnosis. We exploited the Italian Registry for FSHD, in which FSHD families are classified using the Clinical Comprehensive Evaluation Form (CCEF). A total of 122 index cases showing a classical FSHD phenotype (CCEF, category A) and 110 relatives were selected to test with the receiver operating characteristic (ROC) curve, the diagnostic and predictive value of D4Z4 methylation. Moreover, we performed DNA methylation analysis in selected large families with reduced penetrance characterized by the co-presence of subjects carriers of one D4Z4 reduced allele with no signs of disease or presenting the classic FSHD clinical phenotype. We observed a wide variability in the D4Z4 methylation levels among index cases revealing no association with clinical manifestation or disease severity. By extending the analysis to family members, we revealed the low predictive value of D4Z4 methylation in detecting the affected condition. In view of the variability in D4Z4 methylation profiles observed in our large cohort, we conclude that D4Z4 methylation does not mirror the clinical expression of FSHD. We recommend that measurement of this epigenetic mark must be interpreted with caution in clinical practice.
- Published
- 2020
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45. Applying genome-wide CRISPR-Cas9 screens for therapeutic discovery in facioscapulohumeral muscular dystrophy.
- Author
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Lek A, Zhang Y, Woodman KG, Huang S, DeSimone AM, Cohen J, Ho V, Conner J, Mead L, Kodani A, Pakula A, Sanjana N, King OD, Jones PL, Wagner KR, Lek M, and Kunkel LM
- Subjects
- Animals, CRISPR-Cas Systems genetics, Clustered Regularly Interspaced Short Palindromic Repeats genetics, Homeodomain Proteins genetics, Homeodomain Proteins metabolism, Humans, Zebrafish genetics, Zebrafish metabolism, Muscular Dystrophy, Facioscapulohumeral genetics, Muscular Dystrophy, Facioscapulohumeral therapy
- Abstract
The emergence of CRISPR-Cas9 gene-editing technologies and genome-wide CRISPR-Cas9 libraries enables efficient unbiased genetic screening that can accelerate the process of therapeutic discovery for genetic disorders. Here, we demonstrate the utility of a genome-wide CRISPR-Cas9 loss-of-function library to identify therapeutic targets for facioscapulohumeral muscular dystrophy (FSHD), a genetically complex type of muscular dystrophy for which there is currently no treatment. In FSHD, both genetic and epigenetic changes lead to misexpression of DUX4 , the FSHD causal gene that encodes the highly cytotoxic DUX4 protein. We performed a genome-wide CRISPR-Cas9 screen to identify genes whose loss-of-function conferred survival when DUX4 was expressed in muscle cells. Genes emerging from our screen illuminated a pathogenic link to the cellular hypoxia response, which was revealed to be the main driver of DUX4-induced cell death. Application of hypoxia signaling inhibitors resulted in increased DUX4 protein turnover and subsequent reduction of the cellular hypoxia response and cell death. In addition, these compounds proved successful in reducing FSHD disease biomarkers in patient myogenic lines, as well as improving structural and functional properties in two zebrafish models of FSHD. Our genome-wide perturbation of pathways affecting DUX4 expression has provided insight into key drivers of DUX4-induced pathogenesis and has identified existing compounds with potential therapeutic benefit for FSHD. Our experimental approach presents an accelerated paradigm toward mechanistic understanding and therapeutic discovery of a complex genetic disease, which may be translatable to other diseases with well-established phenotypic selection assays., (Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2020
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46. Accelerating implementation of research in Learning Health Systems: Lessons learned from VA Health Services Research and NCATS Clinical Science Translation Award programs.
- Author
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Kilbourne AM, Jones PL, and Atkins D
- Abstract
Translation of research to practice is challenging. In addition to the scientific challenges, there are additional hurdles in navigating the rapidly changing US health care system. There is a need for innovative health interventions that can be adopted in "real-world" settings. Barriers to translation involve misaligned timing of research funding and health system decision-making, lack of research questions aligned with health system and community priorities, and limited incentives in academia for health system and community-based research. We describe new programs from the US Department of Veterans Affairs Health Services Research and Development (HSR&D) and the National Center for Advancing Translational Sciences (NCATS) Clinical and Translational Science Award (CTSA) Programs that are building capacity for Learning Health System research. These programs help to incentivize adopting and adapting Learning Health System principles to ensure that, primarily in implementation science within academic/veterans affairs health systems, there is alignment of the research with the health system and community needs. Both HSR&D and NCATS CTSA Program encourage researchers to develop problem-focused research innovations in partnership with health systems and communities to ultimately facilitate design treatments that are feasible in "real-world" practice., (© The Association for Clinical and Translational Science 2020.)
- Published
- 2020
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47. SGLT2 Inhibitors and the Risk of Hospitalization for Fournier's Gangrene: A Nested Case-Control Study.
- Author
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Wang T, Patel SM, Hickman A, Liu X, Jones PL, Gantz I, and Koro CE
- Abstract
Introduction: Based on post-marketing surveillance, concern has been raised that sodium-glucose cotransporter 2 inhibitors (SGLT2i) may increase the risk of necrotizing fasciitis of the perineum (Fournier's gangrene, FG). As a result of the low incidence of FG, data from clinical trials may be insufficient to robustly assess this issue because of the relatively limited numbers of participants. Real-world evidence may help clarify the association between SGLT2i and FG in the type 2 diabetes (T2D) population., Methods: A nested case-control study was performed using Truven Health MarketScan™ databases. Each patient with T2D hospitalized for FG between 1 April 2013 (when the first SGLT2i was available) and 31 March 2018 (latest available data) was matched (on the basis of sex, age, and cohort entry date) with six controls from the same cohort. The adjusted odds ratio (OR) of hospitalization for FG was estimated for patients receiving SGLT2i compared with those receiving two or more non-SGLT2i antihyperglycemic agents (AHAs) or insulin alone using conditional logistic regression., Results: The cohort included 1,897,935 patients, with 216 hospitalized for FG (incidence rate, 5.2 events per 100,000 person-years). Patients with FG ranged from 23 to 79 years of age; 201 (93.1%) were men. Among the 216 FG cases, 9 (4.2%) were current SGLT2i users; among the 1296 matched controls, 100 (7.7%) were current SGLT2i users. Approximately 93% of SGLT2i were used in combination. The adjusted OR of FG in patients treated with SGLT2i compared with patients treated with two or more non-SGLT2i AHAs or insulin alone was 0.55 [95% CI 0.25-1.18]., Conclusion: The study did not find that treatment with SGLT2i, as compared with treatment with two or more non-SGLT2i AHAs or insulin alone, was statistically significantly associated with an increased risk of hospitalization for FG. Additional studies are needed to corroborate the findings.
- Published
- 2020
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48. Muscle xenografts reproduce key molecular features of facioscapulohumeral muscular dystrophy.
- Author
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Mueller AL, O'Neill A, Jones TI, Llach A, Rojas LA, Sakellariou P, Stadler G, Wright WE, Eyerman D, Jones PL, and Bloch RJ
- Subjects
- Animals, Homeodomain Proteins genetics, Humans, Mice, Muscle, Skeletal pathology, Disease Models, Animal, Heterografts, Muscular Dystrophy, Facioscapulohumeral genetics, Myoblasts transplantation
- Abstract
Aberrant expression of DUX4, a gene unique to humans and primates, causes Facioscapulohumeral Muscular Dystrophy-1 (FSHD), yet the pathogenic mechanism is unknown. As transgenic overexpression models have largely failed to replicate the genetic changes seen in FSHD, many studies of endogenously expressed DUX4 have been limited to patient biopsies and myogenic cell cultures, which never fully differentiate into mature muscle fibers. We have developed a method to xenograft immortalized human muscle precursor cells from patients with FSHD and first-degree relative controls into the tibialis anterior muscle compartment of immunodeficient mice, generating human muscle xenografts. We report that FSHD cells mature into organized and innervated human muscle fibers with minimal contamination of murine myonuclei. They also reconstitute the satellite cell niche within the xenografts. FSHD xenografts express DUX4 and DUX4 downstream targets, retain the 4q35 epigenetic signature of their original donors, and express a novel protein biomarker of FSHD, SLC34A2. Ours is the first scalable, mature in vivo human model of FSHD. It should be useful for studies of the pathogenic mechanism of the disease as well as for testing therapeutic strategies targeting DUX4 expression., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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49. The Good, The Bad, and The Unexpected: Roles of DUX4 in Health and Disease.
- Author
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Himeda CL and Jones PL
- Subjects
- Homeodomain Proteins, Humans, Immune Evasion, Muscular Dystrophy, Facioscapulohumeral, Neoplasms
- Abstract
In this issue of Developmental Cell, Chew et al. (2019) show that the pioneer factor DUX4 is misexpressed in tumors, where it suppresses anti-tumor immune activity. Their findings provide a new mechanism for immune evasion in cancer and highlight the pathogenic effects of re-expressing an embryonic program in adult cells., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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50. The Genetics and Epigenetics of Facioscapulohumeral Muscular Dystrophy.
- Author
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Himeda CL and Jones PL
- Subjects
- CRISPR-Cas Systems, Chromatin chemistry, Chromosomal Proteins, Non-Histone metabolism, Chromosomes, Human, Pair 4, DNA (Cytosine-5-)-Methyltransferases metabolism, DNA Methylation, Gene Editing, Genetic Loci, Genome, Human, Homeodomain Proteins metabolism, Humans, Muscle, Skeletal metabolism, Muscle, Skeletal pathology, Muscular Dystrophy, Facioscapulohumeral classification, Muscular Dystrophy, Facioscapulohumeral metabolism, Muscular Dystrophy, Facioscapulohumeral pathology, Mutation, Severity of Illness Index, DNA Methyltransferase 3B, Chromosomal Proteins, Non-Histone genetics, DNA (Cytosine-5-)-Methyltransferases genetics, Epigenesis, Genetic, Homeodomain Proteins genetics, Muscular Dystrophy, Facioscapulohumeral genetics
- Abstract
Facioscapulohumeral muscular dystrophy (FSHD), a progressive myopathy that afflicts individuals of all ages, provides a powerful model of the complex interplay between genetic and epigenetic mechanisms of chromatin regulation. FSHD is caused by dysregulation of a macrosatellite repeat, either by contraction of the repeat or by mutations in silencing proteins. Both cases lead to chromatin relaxation and, in the context of a permissive allele, aberrant expression of the DUX4 gene in skeletal muscle. DUX4 is a pioneer transcription factor that activates a program of gene expression during early human development, after which its expression is silenced in most somatic cells. When misexpressed in FSHD skeletal muscle, the DUX4 program leads to accumulated muscle pathology. Epigenetic regulators of the disease locus represent particularly attractive therapeutic targets for FSHD, as many are not global modifiers of the genome, and altering their expression or activity should allow correction of the underlying defect.
- Published
- 2019
- Full Text
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