46 results on '"Judith-Anne W. Chapman"'
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2. Effect of Quantitative Nuclear Image Features on Recurrence of Ductal Carcinoma In Situ (DCIS) of the Breast
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Judith-Anne W. Chapman, Yuejiao Fu, Yan Yuan, William A. Christens-Barry, Jin Qian, H. Lavina Lickley, Naomi A. Miller, and David E. Axelrod
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breast ductal carcinoma in situ ,nuclear grade ,image cytometry ,discriminant analysis ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Nuclear grade has been associated with breast DCIS recurrence and progression to invasive carcinoma; however, our previous study of a cohort of patients with breast DCIS did not find such an association with outcome. Fifty percent of patients had heterogeneous DCIS with more than one nuclear grade. The aim of the current study was to investigate the effect of quantitative nuclear features assessed with digital image analysis on ipsilateral DCIS recurrence.Methods: Hematoxylin and eosin stained slides for a cohort of 80 patients with primary breast DCIS were reviewed and two fields with representative grade (or grades) were identified by a Pathologist and simultaneously used for acquisition of digital images for each field. Van Nuys worst nuclear grade was assigned, as was predominant grade, and heterogeneous grading when present. Patients were grouped by heterogeneity of their nuclear grade: Group A: nuclear grade 1 only, nuclear grades 1 and 2, or nuclear grade 2 only (32 patients), Group B: nuclear grades 1, 2 and 3, or nuclear grades 2 and 3 (31 patients), Group 3: nuclear grade 3 only (17 patients). Nuclear fi ne structure was assessed by software which captured thirty-nine nuclear feature values describing nuclear morphometry, densitometry, and texture. Step-wise forward Cox regressions were performed with previous clinical and pathologic factors, and the new image analysis features.Results: Duplicate measurements were similar for 89.7% to 97.4% of assessed image features. The rate of correct classification of nuclear grading with digital image analysis features was similar in the two fields, and pooled assessment across both fields. In the pooled assessment, a discriminant function with one nuclear morphometric and one texture feature was significantly (p = 0.001) associated with nuclear grading, and provided correct jackknifed classification of a patient’s nuclear grade for Group A (78.1%), Group B (48.4%), and Group C (70.6%). The factors significantly associated with DCIS recurrence were those previously found, type of initial presentation (p = 0.03) and amount of parenchymal involvement (p = 0.05), along with the morphometry image feature of ellipticity (p = 0.04).Conclusion: Analysis of nuclear features measured by image cytometry may contribute to the classification and prognosis of breast DCIS patients with more than one nuclear grade.
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- 2008
3. Heterogeneity between Ducts of the Same Nuclear Grade Involved by Duct Carcinoma (DCIS) of the Breast
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Naomi A. Miller, Judith-Anne W. Chapman, Jin Qian, William A. Christens-Barry, Yuejiao Fu, Yan Yuan, H. Lavina A. Lickley, and David E. Axelrod
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Purpose Nuclear grade of breast DCIS is considered during patient management decision-making although it may have only a modest prognostic association with therapeutic outcome. We hypothesized that visual inspection may miss substantive differences in nuclei classified as having the same nuclear grade. To test this hypothesis, we measured subvisual nuclear features by quantitative image cytometry for nuclei with the same grade, and tested for statistical differences in these features. Experimental design and statistical analysis Thirty-nine nuclear digital image features of about 100 nuclei were measured in digital images of H
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- 2010
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4. Effect of Quantitative Nuclear Image Features on Recurrence of Ductal Carcinoma (DCIS) of the Breast
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David E. Axelrod Ph.D., Naomi A. Miller, H. Lavina Lickley, Jin Qian, William A. Christens-Barry, Yan Yuan, Yuejiao Fu, and Judith-Anne W. Chapman Ph.D.
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background Nuclear grade has been associated with breast DCIS recurrence and progression to invasive carcinoma; however, our previous study of a cohort of patients with breast DCIS did not find such an association with outcome. Fifty percent of patients had heterogeneous DCIS with more than one nuclear grade. The aim of the current study was to investigate the effect of quantitative nuclear features assessed with digital image analysis on ipsilateral DCIS recurrence. Methods Hematoxylin and eosin stained slides for a cohort of 80 patients with primary breast DCIS were reviewed and two fields with representative grade (or grades) were identified by a Pathologist and simultaneously used for acquisition of digital images for each field. Van Nuys worst nuclear grade was assigned, as was predominant grade, and heterogeneous grading when present. Patients were grouped by heterogeneity of their nuclear grade: Group A: nuclear grade 1 only, nuclear grades 1 and 2, or nuclear grade 2 only (32 patients), Group B: nuclear grades 1, 2 and 3, or nuclear grades 2 and 3 (31 patients), Group 3: nuclear grade 3 only (17 patients). Nuclear fine structure was assessed by software which captured thirty-nine nuclear feature values describing nuclear morphometry, densitometry, and texture. Step-wise forward Cox regressions were performed with previous clinical and pathologic factors, and the new image analysis features. Results Duplicate measurements were similar for 89.7% to 97.4% of assessed image features. The rate of correct classification of nuclear grading with digital image analysis features was similar in the two fields, and pooled assessment across both fields. In the pooled assessment, a discriminant function with one nuclear morphometric and one texture feature was significantly (p = 0.001) associated with nuclear grading, and provided correct jackknifed classification of a patient's nuclear grade for Group A (78.1%), Group B (48.4%), and Group C (70.6%). The factors significantly associated with DCIS recurrence were those previously found, type of initial presentation (p = 0.03) and amount of parenchymal involvement (p = 0.05), along with the morphometry image feature of ellipticity (p = 0.04). Conclusion Analysis of nuclear features measured by image cytometry may contribute to the classification and prognosis of breast DCIS patients with more than one nuclear grade.
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- 2008
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5. Supplementary Figure S6 from Genetic Polymorphisms in the Long Noncoding RNA MIR2052HG Offer a Pharmacogenomic Basis for the Response of Breast Cancer Patients to Aromatase Inhibitor Therapy
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Liewei Wang, Krishna R. Kalari, Richard M. Weinshilboum, Matthew P. Goetz, Erin E. Carlson, Poulami Barman, Kathleen I. Pritchard, Vered Stearns, Yukihide Momozawa, Yoichi Furukawa, Michiaki Kubo, Bingshu E. Chen, Judith-Anne W. Chapman, Lois E. Shepherd, Paul E. Goss, Matthew J. Ellis, Fang Xie, and James N. Ingle
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Knockdown of MIR2052HG in ERα-negative cell lines.
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- 2023
6. Data from Genetic Polymorphisms in the Long Noncoding RNA MIR2052HG Offer a Pharmacogenomic Basis for the Response of Breast Cancer Patients to Aromatase Inhibitor Therapy
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Liewei Wang, Krishna R. Kalari, Richard M. Weinshilboum, Matthew P. Goetz, Erin E. Carlson, Poulami Barman, Kathleen I. Pritchard, Vered Stearns, Yukihide Momozawa, Yoichi Furukawa, Michiaki Kubo, Bingshu E. Chen, Judith-Anne W. Chapman, Lois E. Shepherd, Paul E. Goss, Matthew J. Ellis, Fang Xie, and James N. Ingle
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Genetic risks in breast cancer remain only partly understood. Here, we report the results of a genome-wide association study of germline DNA from 4,658 women, including 252 women experiencing a breast cancer recurrence, who were entered on the MA.27 adjuvant trial comparing the aromatase inhibitors (AI) anastrozole and exemestane. Single-nucleotide polymorphisms (SNP) of top significance were identified in the gene encoding MIR2052HG, a long noncoding RNA of unknown function. Heterozygous or homozygous individuals for variant alleles exhibited a ∼40% or ∼63% decrease, respectively, in the hazard of breast cancer recurrence relative to homozygous wild-type individuals. Functional genomic studies in lymphoblastoid cell lines and ERα-positive breast cancer cell lines showed that expression from MIR2052HG and the ESR1 gene encoding estrogen receptor-α (ERα) was induced by estrogen and AI in a SNP-dependent manner. Variant SNP genotypes exhibited increased ERα binding to estrogen response elements, relative to wild-type genotypes, a pattern that was reversed by AI treatment. Further, variant SNPs were associated with lower expression of MIR2052HG and ERα. RNAi-mediated silencing of MIR2052HG in breast cancer cell lines decreased ERα expression, cell proliferation, and anchorage-independent colony formation. Mechanistic investigations revealed that MIR2052HG sustained ERα levels both by promoting AKT/FOXO3-mediated ESR1 transcription and by limiting ubiquitin-mediated, proteasome-dependent degradation of ERα. Taken together, our results define MIR2052HS as a functionally polymorphic gene that affects risks of breast cancer recurrence in women treated with AI. More broadly, our results offer a pharmacogenomic basis to understand differences in the response of breast cancer patients to AI therapy. Cancer Res; 76(23); 7012–23. ©2016 AACR.
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- 2023
7. Simulation Modeling of Cancer Clinical Trials: Application to Omitting Radiotherapy in Low-risk Breast Cancer
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Judith-Anne W. Chapman, Jeanne S. Mandelblatt, Jinani Jayasekera, Robert Gray, E. Shelley Hwang, Julia White, Timothy J. Whelan, Willi Sauerbrei, Juhee Song, Thomas B. Julian, Yisheng Li, Anthony Fyles, Judith O. Hopkins, Clyde B. Schechter, Stewart J. Anderson, Reshma Jagsi, Eric J. Feuer, Natasha K. Stout, Joseph A. Sparano, George Luta, Donald A. Berry, Xuelin Huang, and Richard C. Zellars
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Oncology ,Cancer Research ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Proportional hazards model ,medicine.medical_treatment ,Lumpectomy ,Hazard ratio ,medicine.disease ,Confidence interval ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Randomized controlled trial ,law ,030220 oncology & carcinogenesis ,Internal medicine ,medicine ,Clinical endpoint ,030212 general & internal medicine ,Oncotype DX ,business - Abstract
Background We used two models to simulate a proposed noninferiority trial of radiotherapy (RT) omission in low-risk invasive breast cancer to illustrate how modeling could be used to predict the trial's outcomes, inform trial design, and contribute to practice debates. Methods The proposed trial was a prospective randomized trial of no-RT vs RT in women age 40 to 74 years undergoing lumpectomy and endocrine therapy for hormone receptor-positive, human epidermal growth factor receptor 2-negative, stage I breast cancer with an Oncotype DX score of 18 or lower. The primary endpoint was recurrence-free interval (RFI), including locoregional recurrence, distant recurrence, and breast cancer death. Noninferiority required the two-sided 90% confidence interval of the RFI hazard ratio (HR) for no-RT vs RT to be entirely below 1.7. Model inputs included published data. The trial was simulated 1000 times, and results were summarized as percent concluding noninferiority and mean (standard deviation) of hazard ratios for Model GE and Model M, respectively. Results Noninferiority was demonstrated in 18.0% and 3.7% for the two models. The respective means (SD) of the RFI hazard ratios were 1.8 (0.7) and 2.4 (0.9); most were locoregional recurrences. The mean five-year RFI rates for no-RT vs RT (SD) were 92.7% (2.9%) vs 95.5% (2.2%) and 88.4% (2.0%) vs 94.5% (1.6%). Both models showed little or no difference in breast cancer-specific or overall survival. Alternative definitions of low risk based on combinations of age and grade produced similar results. Conclusions The proposed trial was unlikely to show noninferiority of omitting radiotherapy even using alternative definitions of low-risk, as the endpoint included local recurrence. Future trials regarding radiotherapy should address absolute reduction in recurrence and impact of type of recurrence on the patient.
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- 2018
8. Effects of Celecoxib and Low-dose Aspirin on Outcomes in Adjuvant Aromatase Inhibitor–Treated Patients: CCTG MA.27
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Lei Han, Judith-Anne W. Chapman, Lois E. Shepherd, Kathrin Strasser-Weippl, Matthew J. Ellis, M. Higgins, George Thomas Budd, Mark Clemons, Tanja Badovinac-Crnjevic, Karen A. Gelmon, C. Elliott, George W. Sledge, Paul E. Goss, Manuela Rabaglio, Kathleen I. Pritchard, and James N. Ingle
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0301 basic medicine ,Cancer Research ,medicine.medical_specialty ,Anastrozole ,Breast Neoplasms ,Placebo ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Internal medicine ,Humans ,Medicine ,610 Medicine & health ,Univariate analysis ,Aspirin ,Aromatase Inhibitors ,business.industry ,Anti-Inflammatory Agents, Non-Steroidal ,Hazard ratio ,Articles ,medicine.disease ,Confidence interval ,030104 developmental biology ,Oncology ,Celecoxib ,030220 oncology & carcinogenesis ,Neoplasm Recurrence, Local ,business ,medicine.drug - Abstract
Background Celecoxib and low-dose aspirin might decrease risk of breast cancer recurrence. Methods In the Canadian Cancer Trials Group MA.27, postmenopausal hormone receptor–positive breast cancer patients were randomly assigned (2 × 2) to adjuvant exemestane or anastrozole, and celecoxib or placebo. Low-dose aspirin of 81 mg or less was a stratification factor. Due to concerns about cardiac toxicity, celecoxib use was stopped in December 2004, while stratification by aspirin use was removed through protocol amendment. We examined the effects of celecoxib and low-dose aspirin on event-free survival (EFS), defined as time from random assignment to time of locoregional or distant disease recurrence, new primary breast cancer, or death from any cause; distant disease–free survival (DDFS); and overall survival (OS). All statistical tests were two-sided. Results Random assignment to celecoxib (n = 811, 50.0%) or placebo (n = 811, 50.0%) was discontinued after 18 months (n = 1622). At a median of 4.1 years’ follow-up, among 1622 patients, 186 (11.5%) patients had an EFS event: 80 (4.9%) had distant relapse, and 125 (7.7%) died from any cause. Celecoxib did not statistically significantly impact EFS, DDFS, or OS in univariate analysis (respectively, P = .92, P = .55, and P = .56) or multivariable analysis (respectively, P = .74, P = .60, and P = .76). Low-dose aspirin use (aspirin users n = 476, 21.5%; non–aspirin users n = 1733, 78.5%) was associated in univariate analyses with worse EFS (hazard ratio [HR] = 1.48, 95% confidence interval [CI] = 1.12 to 1.96, P = 0.006) and worse OS (HR = 1.87, 95% CI = 1.35 to 2.61, P < .001). After adjusting for baseline characteristics and treatment arm, aspirin use showed no statistical association with EFS (P = .08) and DDFS (P = .82), but was associated with statistically worse OS (HR = 1.67, 95% CI = 1.13 to 2.49, P = .01). Conclusion Random assignment to short-term (≤18 months) celecoxib as well as use of low-dose aspirin showed no effect on DDFS and EFS in multivariable analysis. Low-dose aspirin increased “all-cause” mortality, presumably because of higher preexisting cardiovascular risks.
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- 2018
9. Competing Risks of Mortality by PAM50 Intrinsic Subtype of British Columbia Tamoxifen-Treated Cohort of Postmenopausal Patients With Breast Cancer
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Judith-Anne W. Chapman, Samuel Leung, Torsten O. Nielsen, and Shuzhen Liu
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0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Antineoplastic Agents, Hormonal ,Receptor, ErbB-2 ,Lymphovascular invasion ,Breast Neoplasms ,Cohort Studies ,03 medical and health sciences ,Basal (phylogenetics) ,0302 clinical medicine ,Breast cancer ,Risk Factors ,Internal medicine ,Progesterone receptor ,Biomarkers, Tumor ,Humans ,Medicine ,skin and connective tissue diseases ,Survival rate ,Aged ,business.industry ,Prognosis ,medicine.disease ,Postmenopause ,Survival Rate ,Tamoxifen ,030104 developmental biology ,Receptors, Estrogen ,030220 oncology & carcinogenesis ,Cohort ,Female ,Receptors, Progesterone ,business ,Follow-Up Studies ,Cohort study ,medicine.drug - Abstract
PAM50 intrinsic subtypes have been shown to affect breast cancer prognosis.A British Columbia cohort of 718 postmenopausal women treated with tamoxifen, without chemotherapy, had tumors intrinsically subtyped (luminal A, luminal B, basal, HER2) and centrally reviewed by immunohistochemistry (IHC) for estrogen and progesterone receptor (ER and PgR). We tested whether intrinsic subtype and other patient and tumor characteristics were associated with type of death.At median 11.7 years of follow-up, 429 (60%) of 718 women died: 30% of deaths were breast cancer-specific; 30% were other type. In 425 women 70 years, 32% died of breast cancer and 19% of other type. In 293 women ≥ 70, 27% died of breast cancer and 45% of other type. Intrinsic subtype was associated with breast cancer (P = .001); and older age, with other type (P .001). Additionally, stepwise cause-specific models indicated larger tumor size (P .001), more positive lymph nodes (P .001), and less PgR stain (P = .03) were associated with worse breast cancer survival; more positive lymph nodes (P = .002) and lymphovascular invasion (P = .02) were associated with worse other type. Adjusted breast cancer and other type survival is provided by factors at 5, 10, and 15 years.Intrinsic subtype was associated with breast cancer death, whereas age was associated with other type; most deaths in women ≥ 70 were from other type.
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- 2017
10. Impact of serum HER2, TIMP-1, and CAIX on outcome for HER2+ metastatic breast cancer patients: CCTG MA.31 (lapatinib vs. trastuzumab)
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Wendy R. Parulekar, Rocco J. Crescnzo, Samuel Aparicio, Kim Leitzel, Lois E. Shepherd, Jessica Huang, Dora Nomikos, Suhail M. Ali, Judith Anne W. Chapman, Catherine E. Ellis, Walter P. Carney, Diep Ho, Allan Lipton, Shakeel Virk, Liting Zhu, and Karen A. Gelmon
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Adult ,0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Receptor, ErbB-2 ,Breast Neoplasms ,Lapatinib ,Disease-Free Survival ,Elevated serum ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Antigens, Neoplasm ,Trastuzumab ,Internal medicine ,medicine ,Humans ,Neoplasm Metastasis ,Young adult ,Carbonic Anhydrase IX ,skin and connective tissue diseases ,neoplasms ,Survival analysis ,Aged ,Tissue Inhibitor of Metalloproteinase-1 ,business.industry ,Middle Aged ,Prognosis ,medicine.disease ,Survival Analysis ,Metastatic breast cancer ,Treatment Outcome ,030104 developmental biology ,030220 oncology & carcinogenesis ,Quinazolines ,Biomarker (medicine) ,Female ,business ,medicine.drug - Abstract
The lapatinib–taxane combination led to shorter PFS than trastuzumab–taxane in HER2+ metastatic breast cancer. We investigated the prognostic and predictive effects of pretreatment serum HER2, CAIX, and TIMP-1. MA.31 accrued 652 patients; 537 (82%) were centrally confirmed HER2+. Biomarkers were categorized for univariate and multivariable predictive investigations with a median cut-point, ULN cut-points (15 ng/ml for HER2; 506 pg/ml for CAIX; 454 pg/ml for TIMP-1), and custom cut-points (30 and 100 ng/ml for HER2). Stratified step-wise forward Cox multivariable analysis examined continuous and categorical effects of biomarkers on PFS in the ITT and central HER2+ populations; central HER2+ biomarker results are shown. Serum was banked for 472 (72%) of 652 patients. Higher serum HER2 (>median; >15; >30; or >100 ng/ml; p = 0.05–0.002); higher CAIX (>median; >506 pg/ml; p = 0.02; p = 0.001); and higher TIMP-1 (> median; > 454 pg/ml; p = 0.001; p = 0.02) had shorter univariate PFS. In multivariable analysis, higher continuous TIMP-1 was associated with significantly shorter PFS: HR = 1.001 (95% CI = 1.00–01.002; p = 0.004). Continuous serum HER2 and CAIX were not significantly associated with PFS. HER2 of 15 ng/ml or higher had shorter PFS (p = 0.02); higher categorical CAIX had shorter PFS (p = 0.01–0.08). Interaction terms of HER2, CAIX, and TIMP-1 with treatment were not significant; the predictive test power was low. Higher levels of serum TIMP-1, CAIX, and HER2 were significant prognostic biomarkers of shorter PFS. We found no significant interaction between serum biomarkers and response to lapatinib versus trastuzumab. Evaluation of TIMP-1 and CAIX-targeted therapy in addition to HER2-targeted therapy appears warranted in patients with elevated serum levels of these biomarkers.
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- 2017
11. Osteoporosis therapy and outcomes for postmenopausal patients with hormone receptor-positive breast cancer: NCIC CTG MA.27
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G. Thomas Budd, Allan Lipton, Suhail M. Ali, Lei Han, Manuela Rabaglio, Ashwani Garg, Judith Anne W. Chapman, George W. Sledge, C. Elliott, Lois E. Shepherd, Paul E. Goss, Kathleen I. Pritchard, Matthew J. Ellis, James N. Ingle, and Kim Leitzel
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0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,medicine.drug_class ,medicine.medical_treatment ,Osteoporosis ,Anastrozole ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Breast cancer ,Exemestane ,Internal medicine ,medicine ,Gynecology ,Aromatase inhibitor ,business.industry ,Hazard ratio ,Bisphosphonate ,medicine.disease ,Osteopenia ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,business ,medicine.drug - Abstract
BACKGROUND Breast cancer patients in the MA.27 trial had similar outcomes with steroidal aromatase inhibitor (AI) exemestane and nonsteroidal anastrozole. AIs increase the risk of osteoporosis. This study examined the effects of self-reported osteoporosis and osteoporosis therapy (OPT) on outcomes. METHODS The MA.27 phase 3 adjuvant trial enrolled 7576 postmenopausal women. The primary outcome was event-free survival (EFS), and the secondary outcome was distant disease-free survival (DDFS). Patients were permitted bisphosphonates to prevent or treat osteopenia/osteoporosis. In a multivariate, stratified Cox regression, factors were significant with a 2-sided Wald test P value ≤ .05. RESULTS Osteoporosis was reported at the baseline by 654 of the 7576 women (8.6%) and in total by 1294 patients. Oral OPT was received at the baseline by 815 of the 7576 women (10.8%) and in total by 2711 patients (36%). With a median follow-up of 4.1 years, 693 EFS events (9.15%) and 321 DDFS events (4.2%) occurred. Osteoporosis was not associated with EFS or DDFS. Few EFS events occurred before the initiation of OPT, with no substantive evidence of a time-differing effect on outcomes (nonproportional hazards). OPT (yes vs no) was significantly associated with improved EFS (hazard ratio [HR] for yes vs no, 0.67; 95% confidence interval [CI], 0.57-0.80; P < .001) and DDFS (HR, 0.57; 95% CI, 0.44-0.73; P
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- 2017
12. Relapse-free survival of statistically standardized continuous RT-PCR estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2): NCIC CTG MA.14
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Lois E. Shepherd, Judith-Anne W. Chapman, Paul E. Goss, Catherine A. Schnabel, Elizabeth Zarella, Lei Han, Tanja Badovinac-Crnjevic, Yi Zhang, Kathleen I. Pritchard, Michael Pollak, Mark G. Erlander, Dennis C. Sgroi, and Shemeica Binns
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Oncology ,Cancer Research ,medicine.medical_specialty ,Receptor, ErbB-2 ,Population ,Estrogen receptor ,Breast Neoplasms ,Octreotide ,Disease-Free Survival ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,Progesterone receptor ,Biomarkers, Tumor ,medicine ,Humans ,030212 general & internal medicine ,skin and connective tissue diseases ,education ,Survival analysis ,Gynecology ,education.field_of_study ,business.industry ,Proportional hazards model ,Middle Aged ,medicine.disease ,Survival Analysis ,Postmenopause ,Tamoxifen ,Treatment Outcome ,Receptors, Estrogen ,030220 oncology & carcinogenesis ,Biomarker (medicine) ,Female ,Receptors, Progesterone ,business ,medicine.drug - Abstract
Recent ASCO/CAP guidelines focus on decision making associated with the presence/absence of continuous breast biomarkers. Statistical standardization (SS) is demonstrated as a method to evaluate the effects of continuous RT-PCR biomarker expression levels on breast cancer outcomes. MA.14 allocated 667 postmenopausal patients to tamoxifen based on locally determined ER/PR. Of 299 available patient tumor samples, 292 passed internal quality control. All tumors were centrally assessed by RT-PCR ER/PR/HER2 with each biomarker's z-scores categorized: ≥1.0 standard deviation (SD) below mean;1.0 SD below mean; ≤1.0 SD above mean;1.0 SD above mean. Log-rank statistics tested univariate differences in breast cancer relapse-free survival (RFS). Continuous SS-ER/PR/HER2 were assessed in multivariate Cox step-wise forward regression, adding a factor if p ≤ 0.05. Sensitivity analyses examined an external HER2+ cut-point of 1.32. Patients whose tumors were tested were representative of the MA.14 population (p values = 0.18-0.90). At 9.8 years median follow-up, SS-ER did not univariately impact RFS (p = 0.31). SS-PR values above the mean (z ≥ 0.0) had the best univariate RFS (p = 0.03). SS-HER2 also univariately impacted RFS (p = 0.004) with lowest (z-scores ≤ -1.0) and highest (z-scores 1.0) having shortest RFS. Multivariate stratified/unstratified Cox models indicated patients with T1 tumors (p = 0.02/p = 0.0002) and higher SS-PR (p = 0.02/p = 0.01) had longer RFS; node-negative patients had better RFS (in unstratified analysis, p 0.0001). Local ER/PR status did not impact RFS (p 0.05). Patients with SS HER2+ ≥ 1.32 had worse RFS (univariate, p = 0.05; multivariate, p = 0.06). We demonstrated that higher SS-PR, and SS HER2 levels, measured by RT-PCR impacted breast cancer RFS outcomes. Evaluation in other trials may provide support for this methodology.
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- 2016
13. Effects of Radiotherapy in Early-Stage, Low-Recurrence Risk, Hormone-Sensitive Breast Cancer
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Timothy J. Whelan, Richard C. Zellars, Juhee Song, Joseph A. Sparano, Judith-Anne W. Chapman, Eric J. Feuer, Stewart J. Anderson, George Luta, Xuelin Huang, Anthony W Fyles, Jinani Jayasekera, Jeanne S. Mandelblatt, Thomas B. Julian, Donald A. Berry, Clyde B. Schechter, Willi Sauerbrei, Julia White, Yisheng Li, and Reshma Jagsi
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0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Antineoplastic Agents, Hormonal ,medicine.medical_treatment ,Breast Neoplasms ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Internal medicine ,medicine ,Humans ,Stage (cooking) ,Aged ,Neoplasm Staging ,Proportional Hazards Models ,Aged, 80 and over ,Clinical Trials as Topic ,Proportional hazards model ,business.industry ,Hazard ratio ,Lumpectomy ,Editorials ,Middle Aged ,medicine.disease ,Combined Modality Therapy ,Confidence interval ,Radiation therapy ,030104 developmental biology ,030220 oncology & carcinogenesis ,Hormonal therapy ,Female ,Radiotherapy, Adjuvant ,Neoplasm Grading ,Neoplasm Recurrence, Local ,business - Abstract
Background Radiotherapy after breast conservation has become the standard of care. Prior meta-analyses on effects of radiotherapy predated availability of gene expression profiling (GEP) to assess recurrence risk and/or did not include all relevant outcomes. This analysis used GEP information with pooled individual-level data to evaluate the impact of omitting radiotherapy on recurrence and mortality. Methods We considered trials that evaluated or administered radiotherapy after lumpectomy in women with low-risk breast cancer. Women included had undergone lumpectomy and were treated with hormonal therapy for stage I, ER+ and/or PR+, HER2- breast cancer with Oncotype scores no greater than 18. Recurrence-free interval (RFI), type of RFI (locoregional or distant), and breast cancer-specific and overall survival were compared between no radiotherapy and radiotherapy using adjusted Cox models. All statistical tests were two-sided. Results The final sample included 1778 women from seven trials. Omission of radiotherapy was associated with an overall adjusted hazard ratio of 2.59 (95% confidence interval [CI] = 1.38 to 4.89, P = .003) for RFI. There was a statistically significant increase in any first locoregional recurrence (P = .001), but not distant recurrence events (P = .90), or breast cancer-specific (P = .85) or overall survival (P = .61). Five-year RFI rate was high (93.5% for no radiotherapy vs 97.9% for radiotherapy; absolute reduction = 4.4%, 95% CI = 0.7% to 8.1%, P = .03). The effects of radiotherapy varied across subgroups, with lower RFI rates for those with Oncotype scores of less than 11 (vs 11-18), older (vs younger), and ER+/PR+ status (vs other). Conclusions Omission of radiotherapy in hormone-sensitive patients with low recurrence risk may lead to a modest increase in locoregional recurrence event rates, but does not appear to increase the rate of distant recurrence or death.
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- 2018
14. Octreotide LAR and tamoxifen versus tamoxifen in phase III randomize early breast cancer trials: NCIC CTG MA.14 and NSABP B-29
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B. Dong, Norman Wolmark, Karen A. Gelmon, Michael Pollak, Kathleen I. Pritchard, Judith-Anne W. Chapman, Joseph P. Costantino, Richard G. Margolese, and Lois E. Shepherd
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Adult ,Oncology ,Cancer Research ,medicine.medical_specialty ,Randomization ,Lobular Breast Carcinoma ,Octreotide ,Breast Neoplasms ,Article ,Breast cancer ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,Aged ,Neoplasm Staging ,Proportional hazards model ,business.industry ,Hazard ratio ,Middle Aged ,medicine.disease ,Tamoxifen ,Treatment Outcome ,Lymphatic Metastasis ,T-stage ,Female ,business ,Follow-Up Studies ,medicine.drug - Abstract
NCIC CTG MA.14 and NSABP B-29 trials examined the addition of Octreotide LAR (OCT) to 5 years of tamoxifen (TAM). Gallbladder toxicity led to B-29 discontinuation of OCT, and MA.14 OCT administration shortened to 2 years. Median follow-up was 9.8 years for 667 MA.14 patients and 6.8 years for 893 B-29 patients. The primary endpoint was disease-free survival (DFS), defined as time from randomization to time of breast cancer recurrence; second primary cancer other than squamous or basal cell skin carcinoma, cervical carcinoma in situ, or lobular breast carcinoma in situ; or death. The primary statistical test was a univariable pooled stratified log-rank test; multivariable assessment was with Cox regression. For MA.14, 97 % of patients were ≥50 years; for B-29, 62 %. MA.14 patients were 53 % lymph node negative (LN–) while B-29 were 100 % LN–; 33 % of MA.14 patients received adjuvant chemotherapy, 2 % concurrently, while B-29 had 53 % concurrent chemotherapy. MA.14 patients were 90% hormone receptor positive; B-29, 100 %. MA.14 patients experienced 5-year DFS of 80 % with TAM, 76 % with TAM + OCT; B-29 patients had 5-year DFS of 88 % for both arms. Pooled univariable TAM + OCT to TAM hazard ratio (HR) was 0.99 (95% CI 0.81–1.20; p = 0.69): for MA.14, HR = 0.94 (0.73–1.20; p = 0.50); for B-29, HR = 1.09 (0.80–1.50; p = 0.59). Multivariable pooled HR = 0.98 (0.81–1.20; p = 0.84). Older patients (p < 0.001), with higher T stage (p < 0.001), and LN + (p < 0.001) had shorter DFS. Addition of OCT to TAM did not significantly improve DFS; gallbladder toxicity shortened the additional administration of OCT. This does not negate targeting the insulin–IGF-I receptor family with less toxic therapeutics.
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- 2015
15. Lapatinib or Trastuzumab Plus Taxane Therapy for Human Epidermal Growth Factor Receptor 2–Positive Advanced Breast Cancer: Final Results of NCIC CTG MA.31
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Rustem Khasanov, Judith-Anne W. Chapman, Frances M. Boyle, Anne P. Connor, Miguel Martin, Arnd Nusch, Karen A. Gelmon, Timothy J. Whelan, Alexey Manikhas, Katia Tonkin, David Huntsman, Kathleen I. Pritchard, Dora Nomikos, Hirofumi Mukai, Julie Lemieux, Susan Ellard, Sergei Tjulandin, Robert E. Coleman, Sergio Santillana, Bella Kaufman, Shulamith Rizel, Susan Dent, Angelo Di Leo, Lee S. Schwartzberg, Wendy R. Parulekar, Lois E. Shepherd, and Samuel Aparicio
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Oncology ,Cancer Research ,medicine.medical_specialty ,Taxane ,business.industry ,medicine.medical_treatment ,Cancer ,Lapatinib ,medicine.disease ,Metastatic breast cancer ,Trastuzumab ,Internal medicine ,Monoclonal ,Clinical endpoint ,Medicine ,skin and connective tissue diseases ,business ,neoplasms ,Adjuvant ,medicine.drug - Abstract
Purpose The efficacy of lapatinib versus trastuzumab combined with taxanes in the first-line setting of human epidermal growth factor receptor 2 (HER2) –positive metastatic breast cancer (BC) is unknown. Patients and Methods The MA.31 trial compared a combination of first-line anti-HER2 therapy (lapatinib or trastuzumab) and taxane therapy for 24 weeks, followed by the same anti-HER2 monotherapy until progression. Stratification was by prior (neo)adjuvant anti-HER2 therapy, prior (neo)adjuvant taxane, planned taxane, and liver metastases. The primary end point was intention-to-treat (ITT) progression-free survival (PFS), defined as time from random assignment to progression by RECIST (version 1.0) criteria, or death for patients with locally assessed HER2-positive tumors. The primary test statistic was a stratified log-rank test for noninferiority. PFS was also assessed for patients with centrally confirmed HER2-positive tumors. Results From July 17, 2008, to December 1, 2011, 652 patients were accrued from 21 countries, resulting in 537 patients with centrally confirmed HER2-positive tumors. Median follow-up was 21.5 months. Median ITT PFS was 9.0 months with lapatinib and 11.3 months with trastuzumab. By ITT analysis, PFS was inferior for lapatinib compared with trastuzumab, with a stratified hazard ratio (HR) of 1.37 (95% CI, 1.13 to 1.65; P = .001). In patients with centrally confirmed HER2-positive tumors, median PFS was 9.1 months with lapatinib and 13.6 months with trastuzumab (HR, 1.48; 95% CI, 1.20 to 1.83; P < .001). More grade 3 or 4 diarrhea and rash were observed with lapatinib (P < .001). PFS results were supported by the secondary end point of overall survival, with an ITT HR of 1.28 (95% CI, 0.95 to 1.72; P = .11); in patients with centrally confirmed HER2-positive tumors, the HR was 1.47 (95% CI, 1.03 to 2.09; P = .03). Conclusion As first-line therapy for HER2-positive metastatic BC, lapatinib combined with taxane was associated with shorter PFS and more toxicity compared with trastuzumab combined with taxane.
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- 2015
16. Genetic polymorphisms in the long noncoding RNA MIR2052HG offer a pharmacogenomic basis for the response of breast cancer patients to aromatase inhibitor therapy
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Richard M. Weinshilboum, James N. Ingle, Paul E. Goss, Yoichi Furukawa, Krishna R. Kalari, Judith Anne W. Chapman, Fang Xie, Yukihide Momozawa, Poulami Barman, Bingshu E. Chen, Kathleen I. Pritchard, Michiaki Kubo, Liewei Wang, Vered Stearns, Lois E. Shepherd, Matthew P. Goetz, Matthew J. Ellis, and Erin E. Carlson
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0301 basic medicine ,Cancer Research ,medicine.drug_class ,Anastrozole ,Estrogen receptor ,Single-nucleotide polymorphism ,Breast Neoplasms ,Biology ,Bioinformatics ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Breast cancer ,Exemestane ,Cell Line, Tumor ,medicine ,Humans ,Aromatase ,Aromatase inhibitor ,Polymorphism, Genetic ,Aromatase Inhibitors ,Middle Aged ,medicine.disease ,030104 developmental biology ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein ,Female ,RNA, Long Noncoding ,Estrogen receptor alpha ,medicine.drug ,Genome-Wide Association Study - Abstract
Genetic risks in breast cancer remain only partly understood. Here, we report the results of a genome-wide association study of germline DNA from 4,658 women, including 252 women experiencing a breast cancer recurrence, who were entered on the MA.27 adjuvant trial comparing the aromatase inhibitors (AI) anastrozole and exemestane. Single-nucleotide polymorphisms (SNP) of top significance were identified in the gene encoding MIR2052HG, a long noncoding RNA of unknown function. Heterozygous or homozygous individuals for variant alleles exhibited a ∼40% or ∼63% decrease, respectively, in the hazard of breast cancer recurrence relative to homozygous wild-type individuals. Functional genomic studies in lymphoblastoid cell lines and ERα-positive breast cancer cell lines showed that expression from MIR2052HG and the ESR1 gene encoding estrogen receptor-α (ERα) was induced by estrogen and AI in a SNP-dependent manner. Variant SNP genotypes exhibited increased ERα binding to estrogen response elements, relative to wild-type genotypes, a pattern that was reversed by AI treatment. Further, variant SNPs were associated with lower expression of MIR2052HG and ERα. RNAi-mediated silencing of MIR2052HG in breast cancer cell lines decreased ERα expression, cell proliferation, and anchorage-independent colony formation. Mechanistic investigations revealed that MIR2052HG sustained ERα levels both by promoting AKT/FOXO3-mediated ESR1 transcription and by limiting ubiquitin-mediated, proteasome-dependent degradation of ERα. Taken together, our results define MIR2052HS as a functionally polymorphic gene that affects risks of breast cancer recurrence in women treated with AI. More broadly, our results offer a pharmacogenomic basis to understand differences in the response of breast cancer patients to AI therapy. Cancer Res; 76(23); 7012–23. ©2016 AACR.
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- 2016
17. Osteoporosis therapy and outcomes for postmenopausal patients with hormone receptor-positive breast cancer: NCIC CTG MA.27
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Allan, Lipton, Judith-Anne W, Chapman, Kim, Leitzel, Ashwani, Garg, Kathleen I, Pritchard, James N, Ingle, G Thomas, Budd, Matthew J, Ellis, George W, Sledge, Manuela, Rabaglio, Lei, Han, Catherine R, Elliott, Lois E, Shepherd, Paul E, Goss, and Suhail M, Ali
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Male ,Bone Density Conservation Agents ,Diphosphonates ,Aromatase Inhibitors ,Breast Neoplasms ,Anastrozole ,Middle Aged ,Triazoles ,Disease-Free Survival ,Androstadienes ,Treatment Outcome ,Receptors, Estrogen ,Chemotherapy, Adjuvant ,Multivariate Analysis ,Nitriles ,Humans ,Female ,Radiotherapy, Adjuvant ,Mastectomy ,Osteoporosis, Postmenopausal ,Aged ,Proportional Hazards Models - Abstract
Breast cancer patients in the MA.27 trial had similar outcomes with steroidal aromatase inhibitor (AI) exemestane and nonsteroidal anastrozole. AIs increase the risk of osteoporosis. This study examined the effects of self-reported osteoporosis and osteoporosis therapy (OPT) on outcomes.The MA.27 phase 3 adjuvant trial enrolled 7576 postmenopausal women. The primary outcome was event-free survival (EFS), and the secondary outcome was distant disease-free survival (DDFS). Patients were permitted bisphosphonates to prevent or treat osteopenia/osteoporosis. In a multivariate, stratified Cox regression, factors were significant with a 2-sided Wald test P value ≤ .05.Osteoporosis was reported at the baseline by 654 of the 7576 women (8.6%) and in total by 1294 patients. Oral OPT was received at the baseline by 815 of the 7576 women (10.8%) and in total by 2711 patients (36%). With a median follow-up of 4.1 years, 693 EFS events (9.15%) and 321 DDFS events (4.2%) occurred. Osteoporosis was not associated with EFS or DDFS. Few EFS events occurred before the initiation of OPT, with no substantive evidence of a time-differing effect on outcomes (nonproportional hazards). OPT (yes vs no) was significantly associated with improved EFS (hazard ratio [HR] for yes vs no, 0.67; 95% confidence interval [CI], 0.57-0.80; P.001) and DDFS (HR, 0.57; 95% CI, 0.44-0.73; P. 001). Time-differing (time-dependent) OPT was not (EFS; P = .45). OPT did not alter the incidence of visceral-only metastasis (P = .31).Oral OPT, administered to postmenopausal breast cancer patients receiving adjuvant AI therapy, was associated with improved EFS and DDFS; the time of OPT initiation (a time-dependent effect) did not affect the outcome. OPT did not alter the risk of visceral metastasis. Cancer 2017;123:2444-51. © 2017 American Cancer Society.
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- 2016
18. Competing risks of death in women treated with adjuvant aromatase inhibitors for early breast cancer on NCIC CTG MA.27
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James N. Ingle, Paul E. Goss, C. Elliott, Timothy J. Whelan, Karen A. Gelmon, Hyman B. Muss, Kathleen I. Pritchard, Lois E. Shepherd, and Judith Anne W. Chapman
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Oncology ,Cancer Research ,medicine.medical_specialty ,Anastrozole ,Breast Neoplasms ,Comorbidity ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Breast cancer ,Exemestane ,Trastuzumab ,Internal medicine ,Cause of Death ,Nitriles ,medicine ,Humans ,030212 general & internal medicine ,Survival analysis ,Cause of death ,Aged ,Gynecology ,Aged, 80 and over ,business.industry ,Aromatase Inhibitors ,Letrozole ,Cancer ,Middle Aged ,Triazoles ,medicine.disease ,Survival Analysis ,Androstadienes ,Postmenopause ,Treatment Outcome ,chemistry ,Cardiovascular Diseases ,Chemotherapy, Adjuvant ,030220 oncology & carcinogenesis ,Female ,business ,medicine.drug - Abstract
Baseline patient and tumor characteristics differentially affected type of death in the MA.17 placebo-controlled letrozole trial where cardiovascular death was not separately identified. The MA.27 trial allowed competing risks analysis of breast cancer (BC), cardiovascular, and other type (OT) of death. MA.27 was a phase III adjuvant breast cancer trial of exemestane versus anastrozole. Effects of baseline patient and tumor characteristics were tested for whether factors were associated with (1) all cause mortality and (2) cause-specific mortality. We also fit step-wise forward cause-specific-adjusted models. 7576 women (median age 64 years; 5417 (72 %) < 70 years and 2159 (28 %) ≥ 70 years) were enrolled and followed for median 4.1 years. The 432 deaths comprised 187 (43 %) BC, 66 (15 %) cardiovascular, and 179 (41 %) OT. Five baseline factors were differentially associated with type of death. Older patients had greater BC (p = 0.03), cardiovascular (p < 0.001), and other types (p < 0.001) of mortality. Patients with pre-existing cardiovascular history had worse cardiovascular mortality (p < 0.001); those with worse ECOG performance status had worse OT mortality (p < 0.001). Patients with T1 tumors (p < 0.001) and progesterone receptor positive had less BC mortality (p < 0.001). Fewer BC deaths occurred with node-negative disease (p < 0.001), estrogen receptor-positive tumors (p = 0.001), and without adjuvant chemotherapy (p = 0.005); worse cardiovascular mortality (p = 0.01), with trastuzumab; worse OT mortality, for non-whites (p = 0.03) and without adjuvant radiotherapy (p = 0.003). Overall, 57 % of deaths in MA.27 AI-treated patients were non-breast cancer related. Baseline patient and tumor characteristics differentially affected type of death with women 70 or older experiencing more non-breast cancer death.
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- 2016
19. Randomized Trial of Tamoxifen Versus Combined Tamoxifen and Octreotide LAR Therapy in the Adjuvant Treatment of Early-Stage Breast Cancer in Postmenopausal Women: NCIC CTG MA.14
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Jacques Cantin, Judith-Anne W. Chapman, David Walde, Lei Han, Theodore A. Vandenberg, B. Norris, Carolyn F. Wilson, Kathleen I. Pritchard, Susan Dent, Susan E. O'Reilly, Ettie Piura, B. Findlay, Timothy J. Whelan, Michael Pollak, Lois E. Shepherd, and Paul E. Goss
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Adult ,Oncology ,Cancer Research ,medicine.medical_specialty ,Antineoplastic Agents, Hormonal ,medicine.medical_treatment ,Octreotide ,Breast Neoplasms ,Adenocarcinoma ,Disease-Free Survival ,law.invention ,Breast cancer ,Randomized controlled trial ,law ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Clinical endpoint ,Adjuvant therapy ,Humans ,Insulin ,Insulin-Like Growth Factor I ,Vitamin D ,Aged ,Gynecology ,C-Peptide ,business.industry ,Hazard ratio ,Middle Aged ,medicine.disease ,Postmenopause ,Tamoxifen ,Treatment Outcome ,Chemotherapy, Adjuvant ,Quality of Life ,Female ,business ,medicine.drug - Abstract
Purpose Somatostatin analogs act directly on breast cancer cells and indirectly on insulin and insulin-like growth factor 1 (IGF-1) levels. This trial was undertaken to assess whether octreotide would lower insulin and IGF-1 levels and reduce risk of breast cancer recurrence. Patients and Methods The NCIC CTG MA.14 (NCIC Clinical Trials Group MA.14) trial randomly assigned postmenopausal women to 5 years of tamoxifen 20 mg daily (TAM) or TAM plus 2 years of octreotide 90 mg depot intramuscular injections monthly (TAM-OCT) as adjuvant therapy. The primary end point was event-free survival (EFS). Secondary end points were relapse-free survival (RFS), overall survival (OS), toxicity, and effects of treatment on IGF physiology. Results Among 667 women with a median follow-up of 7.9 years, 220 events occurred—108 with TAM-OCT and 112 with TAM. Adjusted hazard ratios (HRs; TAM-OCT to TAM) were 0.93 for EFS (95% CI, 0.71 to 1.22; P = .62), 0.84 for RFS (95% CI, 0.59 to 1.18; P = .31), and 0.97 for OS (95% CI, 0.69 to 1.37; P = .86). Among patients with normal baseline gallbladder imaging, cholecystectomy was required in 23.0% of those receiving TAM-OCT but in only 1.4% of those receiving TAM (P < .001). At 4 months, TAM-OCT had significantly (P < .001) lowered IGF-1, IGF binding protein 3, and C-peptide levels. Older age (P = .02), tumor size (P = .001), nodal status (P = .01), high C-peptide levels (P < .001), and higher body mass index (BMI) in models excluding C-peptide (P < .001) were associated with poorer EFS in multivariate analysis. Conclusion Octreotide-related changes in circulating IGF-1 and C-peptide levels were statistically significant. Octreotide did not add significant clinical benefit. High C-peptide levels (surrogate for insulin secretion rate) and high BMI were associated with poor outcome.
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- 2011
20. Avoiding Pitfalls in the Statistical Analysis of Heterogeneous Tumors
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Judith-Anne W. Chapman, Naomi Miller, and David E. Axelrod
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Patient characteristics ,Context (language use) ,Computational biology ,Review ,Bioinformatics ,lcsh:Computer applications to medicine. Medical informatics ,Tumor Sample ,03 medical and health sciences ,0302 clinical medicine ,Intratumor heterogeneity ,Medicine ,cancer ,General Materials Science ,Statistical analysis ,Sampling (medicine) ,030304 developmental biology ,0303 health sciences ,business.industry ,biomarkers ,Small sample ,statistics ,030220 oncology & carcinogenesis ,Informatics ,lcsh:R858-859.7 ,prognosis ,heterogeneity ,business - Abstract
Information about tumors is usually obtained from a single assessment of a tumor sample, performed at some point in the course of the development and progression of the tumor, with patient characteristics being surrogates for natural history context. Differences between cells within individual tumors (intratumor heterogeneity) and between tumors of different patients (intertumor heterogeneity) may mean that a small sample is not representative of the tumor as a whole, particularly for solid tumors which are the focus of this paper. This issue is of increasing importance as high-throughput technologies generate large multi-feature data sets in the areas of genomics, proteomics, and image analysis. Three potential pitfalls in statistical analysis are discussed (sampling, cut-points, and validation) and suggestions are made about how to avoid these pitfalls.
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- 2009
21. Meta-Analysis of Phase II Cooperative Group Trials in Metastatic Stage IV Melanoma to Determine Progression-Free and Overall Survival Benchmarks for Future Phase II Trials
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Scott Saxman, P. Y. Liu, Elizabeth Eisenhauer, Sandra J. Lee, Edward L. Korn, Svetomir N. Markovic, Vernon K. Sondak, Vera J. Suman, James J. Moon, Michael B. Atkins, Judith Anne W. Chapman, Donna Niedzwiecki, Wendy R. Parulekar, and John M. Kirkwood
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Oncology ,Cancer Research ,Prognostic variable ,medicine.medical_specialty ,Skin Neoplasms ,Multivariate analysis ,Disease-Free Survival ,Clinical Trials, Phase II as Topic ,Meta-Analysis as Topic ,Internal medicine ,medicine ,Humans ,Progression-free survival ,Melanoma ,Survival rate ,Survival analysis ,Performance status ,Brain Neoplasms ,business.industry ,Prognosis ,Survival Analysis ,Surgery ,Survival Rate ,Clinical trial ,Benchmarking ,Research Design ,Sample Size ,Meta-analysis ,Multivariate Analysis ,business - Abstract
Purpose Objective tumor response rates observed in phase II trials for metastatic melanoma have historically not provided a reliable indicator of meaningful survival benefits. To facilitate using overall survival (OS) or progression-free survival (PFS) as an endpoint for future phase II trials, we evaluated historical data from cooperative group phase II trials to attempt to develop benchmarks for OS and PFS as reference points for future phase II trials. Patients and Methods Individual-level and trial-level data were obtained for patients enrolled onto 42 phase II trials (70 trial arms) that completed accrual in the years 1975 through 2005 and conducted by Southwest Oncology Group, Eastern Cooperative Oncology Group, Cancer and Leukemia Group B, North Central Cancer Treatment Group, and the Clinical Trials Group of the National Cancer Institute of Canada. Univariate and multivariate analyses were performed to identify prognostic variables, and between-trial(-arm) variability in 1-year OS rates and 6-month PFS rates were examined. Results Statistically significant individual-level and trial-level prognostic factors found in a multivariate survival analysis for OS were performance status, presence of visceral disease, sex, and whether the trial excluded patients with brain metastases. Performance status, sex, and age were statistically significant prognostic factors for PFS. Controlling for these prognostic variables essentially eliminated between-trial variability in 1-year OS rates but not in 6-month PFS rates. Conclusion Benchmarks are provided for 1-year OS or OS curves that make use of the distribution of prognostic factors of the patients in the phase II trial. A similar benchmark for 6-month PFS is provided, but its use is more problematic because of residual between-trial variation in this endpoint.
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- 2008
22. Proposal for Standardized Definitions for Efficacy End Points in Adjuvant Breast Cancer Trials: The STEEP System
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Joseph P. Costantino, Robert Gray, Sally Hunsberger, Kathleen I. Pritchard, Richard D. Gelber, William E. Barlow, Rebecca A. Enos, Jo Anne Zujewski, Joseph A. Sparano, Clifford A. Hudis, and Judith Anne W. Chapman
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Cancer Research ,medicine.medical_specialty ,Endpoint Determination ,medicine.medical_treatment ,MEDLINE ,Breast Neoplasms ,Breast cancer ,medicine ,Overall survival ,Humans ,Neoplasm Invasiveness ,Intensive care medicine ,Survival rate ,Clinical Trials as Topic ,business.industry ,Carcinoma, Ductal, Breast ,medicine.disease ,Surgery ,Survival Rate ,Clinical trial ,Radiation therapy ,Carcinoma, Lobular ,Carcinoma, Intraductal, Noninfiltrating ,Oncology ,Chemotherapy, Adjuvant ,Female ,Radiotherapy, Adjuvant ,Neoplasm Recurrence, Local ,Biostatistics ,business ,Adjuvant - Abstract
Purpose Standardized definitions of breast cancer clinical trial end points must be adopted to permit the consistent interpretation and analysis of breast cancer clinical trials and to facilitate cross-trial comparisons and meta-analyses. Standardizing terms will allow for uniformity in data collection across studies, which will optimize clinical trial utility and efficiency. A given end point term (eg, overall survival) used in a breast cancer trial should always encompass the same set of events (eg, death attributable to breast cancer, death attributable to cause other than breast cancer, death from unknown cause), and, in turn, each event within that end point should be commonly defined across end points and studies. Methods A panel of experts in breast cancer clinical trials representing medical oncology, biostatistics, and correlative science convened to formulate standard definitions and address the confusion that nonstandard definitions of widely used end point terms for a breast cancer clinical trial can generate. We propose standard definitions for efficacy end points and events in early-stage adjuvant breast cancer clinical trials. In some cases, it is expected that the standard end points may not address a specific trial question, so that modified or customized end points would need to be prospectively defined and consistently used. Conclusion The use of the proposed common end point definitions will facilitate interpretation of trial outcomes. This approach may be adopted to develop standard outcome definitions for use in trials involving other cancer sites.
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- 2007
23. Treatment-Associated Musculoskeletal and Vasomotor Symptoms and Relapse-Free Survival in the NCIC CTG MA.27 Adjuvant Breast Cancer Aromatase Inhibitor Trial
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Paul E. Goss, G. Thomas Budd, Cynthia X. Ma, Pedro E.R. Liedke, George W. Sledge, Vered Stearns, Manuela Rabaglio, Judith-Anne W. Chapman, Matthew J. Ellis, Lois E. Shepherd, Kathleen I. Pritchard, Jessica Kundapur, James N. Ingle, and Aurélie Le Maître
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Adult ,Oncology ,Cancer Research ,medicine.medical_specialty ,Antineoplastic Agents, Hormonal ,medicine.drug_class ,Anastrozole ,Breast Neoplasms ,Kaplan-Meier Estimate ,Disease-Free Survival ,chemistry.chemical_compound ,Breast cancer ,Exemestane ,Internal medicine ,Nitriles ,medicine ,Humans ,Aromatase ,Musculoskeletal System ,Aged ,Aromatase inhibitor ,biology ,Vasomotor ,business.industry ,Proportional hazards model ,Aromatase Inhibitors ,Common Terminology Criteria for Adverse Events ,ORIGINAL REPORTS ,Middle Aged ,Triazoles ,medicine.disease ,Surgery ,Androstadienes ,Vasomotor System ,chemistry ,Chemotherapy, Adjuvant ,Hot Flashes ,biology.protein ,Female ,business ,medicine.drug - Abstract
Purpose Treatment-emergent symptoms with adjuvant tamoxifen and aromatase inhibitors (AIs) have been associated with superior recurrence-free survival (RFS). We hypothesized that MA.27 anastrozole- or exemestane-treated patients with new or worsening vasomotor and/or joint symptoms would have improved RFS. Patients and Methods MA.27 randomly assigned 7,576 postmenopausal women with breast cancer to 5 years of anastrozole or exemestane. Patient-reported symptoms were collected using the Common Terminology Criteria for Adverse Events version 3.0 at protocol-specified baseline and 6- and 12-month clinical visits. Symptoms were considered present with either vasomotor and/or joint complaints. Associations between symptoms and baseline patient characteristics were examined with χ2 and Fisher's exact tests. Subsequent effects of new or worsening symptoms on RFS were examined with landmark analyses and stratified univariable and multivariable Cox models. We examined the effects of 3-month symptoms arising from unplanned clinic visits as a result of severe toxicity. Results Patients were assessable if eligible for the MA.27 trial, received some trial therapy, and had no disease recurrence at the end of a symptom assessment period; 96% of patients (n = 7,306 patients) were included at 6 months, and 96% (n = 7,246) were included at 12 months. Thirty-four percent of patients had baseline symptoms. For patients without baseline symptoms, 25% and 52% had new symptoms by 6 and 12 months, respectively. Neither treatment-emergent nor baseline symptoms significantly impacted RFS (P > .10) in patients with or without baseline symptoms. Conclusion In MA.27, anastrozole or exemestane treatment-emergent symptoms were not associated with improved RFS. Women should be supported through treatment and encouraged to remain on their AI regardless of their symptoms.
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- 2014
24. Effects of adjuvant exemestane versus anastrozole on bone mineral density for women with early breast cancer (MA.27B): a companion analysis of a randomised controlled trial
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Hannah M. Linden, Lois E. Shepherd, Vered Stearns, Paul E. Goss, Angela M. Cheung, Tanja Badovinac-Crnjevic, Haji Chalchal, James N. Ingle, Kathleen I. Pritchard, Dawn L. Hershman, Judith Anne W. Chapman, C. Elliott, Hyman B. Muss, Judite Scher, Kendrith M. Rowland, Jessica St. Louis, and Sundeep Khosla
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Time Factors ,Bone density ,chemistry.chemical_compound ,Fractures, Bone ,Exemestane ,Bones of Lower Extremity ,Bone Density ,Aromatase ,Vitamin D ,Bone mineral ,Aged, 80 and over ,Lumbar Vertebrae ,biology ,Bone Density Conservation Agents ,Diphosphonates ,Aromatase Inhibitors ,Middle Aged ,Postmenopause ,medicine.anatomical_structure ,Treatment Outcome ,Oncology ,Chemotherapy, Adjuvant ,Hip bone ,Female ,medicine.drug ,musculoskeletal diseases ,Adult ,medicine.medical_specialty ,Canada ,Neoplasms, Hormone-Dependent ,Antineoplastic Agents, Hormonal ,medicine.drug_class ,Anastrozole ,Breast Neoplasms ,Breast cancer ,Internal medicine ,Nitriles ,medicine ,Humans ,Aged ,Aromatase inhibitor ,business.industry ,Triazoles ,medicine.disease ,United States ,Surgery ,Androstadienes ,Radiography ,chemistry ,Dietary Supplements ,biology.protein ,Calcium ,business - Abstract
Summary Background Treatment of breast cancer with aromatase inhibitors is associated with damage to bones. NCIC CTG MA.27 was an open-label, phase 3, randomised controlled trial in which women with breast cancer were assigned to one of two adjuvant oral aromatase inhibitors—exemestane or anastrozole. We postulated that exemestane—a mildly androgenic steroid—might have a less detrimental effect on bone than non-steroidal anastrozole. In this companion study to MA.27, we compared changes in bone mineral density (BMD) in the lumbar spine and total hip between patients treated with exemestane and patients treated with anastrozole. Methods In MA.27, postmenopausal women with early stage hormone (oestrogen) receptor-positive invasive breast cancer were randomly assigned to exemestane 25 mg versus anastrozole 1 mg, daily. MA.27B recruited two groups of women from MA.27: those with BMD T-scores of −2·0 or more (up to 2 SDs below sex-matched, young adult mean) and those with at least one T-score (hip or spine) less than −2·0. Both groups received vitamin D and calcium; those with baseline T-scores of less than −2·0 also received bisphosphonates. The primary endpoints were percent change of BMD at 2 years in lumbar spine and total hip for both groups. We analysed patients according to which aromatase inhibitor and T-score groups they were allocated to but BMD assessments ceased if patients deviated from protocol. This study is registered with ClinicalTrials.gov, NCT00354302. Findings Between April 24, 2006, and May 30, 2008, 300 patients with baseline T-scores of −2·0 or more were accrued (147 allocated exemestane, 153 anastrozole); and 197 patients with baseline T-scores of less than −2·0 (101 exemestane, 96 anastrozole). For patients with T-scores greater than −2·0 at baseline, mean change of bone mineral density in the spine at 2 years did not differ significantly between patients taking exemestane and patients taking anastrozole (−0·92%, 95% CI −2·35 to 0·50 vs −2·39%, 95% CI −3·77 to −1·01; p=0·08). Respective mean loss in the hip was −1·93% (95% CI −2·93 to −0·93) versus −2·71% (95% CI −4·32 to −1·11; p=0·10). Likewise for those who started with T-scores of less than −2·0, mean change of spine bone mineral density at 2 years did not differ significantly between the exemestane and anastrozole treatment groups (2·11%, 95% CI −0·84 to 5·06 vs 3·72%, 95% CI 1·54 to 5·89; p=0·26), nor did hip bone mineral density (2·09%, 95% CI −1·45 to 5·63 vs 0·0%, 95% CI −3·67 to 3·66; p=0·28). Patients with baseline T-score of −2·0 or more taking exemestane had two fragility fractures and two other fractures, those taking anastrozole had three fragility fractures and five other fractures. For patients who had baseline T-scores of less than −2·0 taking exemestane, one had a fragility fracture and four had other fractures, whereas those taking anastrozole had five fragility fractures and one other fracture. Interpretation Our results demonstrate that adjuvant treatment with aromatase inhibitors can be considered for breast cancer patients who have T-scores less than −2·0. Funding Canadian Cancer Society Research Institute, Pfizer, Canadian Institutes of Health Research.
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- 2014
25. Assessing genetic markers of tumour progression in the context of intratumour heterogeneity
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T. Vincent Shankey, Frederic M. Waldman, Cees J. Cornelisse, Sandra R. Wolman, Dan H. Moore, Jarle Christensen, Stanley E. Shackney, Y. Remvikos, Eric Wolman, R. Allen White, David E. Axelrod, Judith-Anne W. Chapman, Heinz Baisch, and Larry S. Liebovitch
- Subjects
Tumour heterogeneity ,Genetic heterogeneity ,Disease progression ,Biophysics ,Context (language use) ,Cell Biology ,Hematology ,Computational biology ,Biology ,Bioinformatics ,Pathology and Forensic Medicine ,Time line ,Endocrinology ,Genetic marker ,In patient - Abstract
This is a report from the Kananaskis working group on quantitative methods in tumour heterogeneity. Tumour progression is currently believed to result from genetic instability and consequent acquisition of new genetic properties in some of the tumour cells. Cross-sectional assessment of genetic markers for human tumours requires quantifiable measures of intratumour heterogeneity for each parameter or characteristic observed; the relevance of heterogeneity to tumour progression can best be ascertained by repeated assessment along a tumour progressional time line. This paper outlines experimental and analytic considerations that, with repeated use, should lead to a better understanding of tumour heterogeneity, and hence, to improvements in patient diagnosis and therapy. Four general principles were agreed upon at the Symposium: (1) the concept of heterogeneity requires a quantifiable definition so that it can be assessed repeatably; (2) the quantification of heterogeneity is necessary so that testable hypotheses may be formulated and checked to determine the degree of support from observed data; (3) it is necessary to consider (a) what is being measured, (b) what is currently measurable, and (c) what should be measured; and (4) the proposal of working models is a useful step that will assist our understanding of the origins and significance of heterogeneity in tumours. The properties of these models should then be studied so that hypotheses may be refined and validated. Cytometry 31:67–73, 1998. © 1998 Wiley-Liss, Inc.
- Published
- 1998
26. Effect of continuous statistically standardized measures of estrogen and progesterone receptors on disease-free survival in NCIC CTG MA.12 Trial and BC Cohort
- Author
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Paul E. Goss, Karen A. Gelmon, Judith-Anne W. Chapman, Aurélie Le Maître, Torsten O. Nielsen, P. S. Bernard, Samuel Leung, Matthew J. Ellis, Stephen Chia, Vivien H.C. Bramwell, Lois E. Shepherd, and Kathleen I. Pritchard
- Subjects
Oncology ,medicine.medical_specialty ,medicine.drug_class ,Estrogen receptor ,Breast Neoplasms ,Disease-Free Survival ,Cohort Studies ,Breast cancer ,Internal medicine ,Progesterone receptor ,Humans ,Medicine ,skin and connective tissue diseases ,Neoplasm Staging ,Medicine(all) ,Gynecology ,business.industry ,Proportional hazards model ,Prognosis ,medicine.disease ,Immunohistochemistry ,Postmenopause ,Premenopause ,Receptors, Estrogen ,Hormone receptor ,Estrogen ,Female ,Receptors, Progesterone ,business ,Tamoxifen ,Follow-Up Studies ,Research Article ,medicine.drug - Abstract
Introduction: We hypothesized improved inter-laboratory comparability of estrogen receptor (ER) and progesterone receptor (PgR) across different assay methodologies with adjunctive statistical standardization, akin to bone mineral density (BMD) z-scores. We examined statistical standardization in MA.12, a placebo-controlled pre-menopausal trial of adjuvant tamoxifen with locally assessed hormone receptor +/- tumours, and in a cohort of post-menopausal British Columbia (BC) tamoxifen-treated patients. Methods: ER and PgR were centrally assessed for both patient groups with real time quantitative reverse transcription polymerase chain reaction (qPCR) and immunohistochemistry (IHC). Effects on disease-free survival (DFS) were investigated separately for 345 MA.12 and 673 BC patients who had both qPCR and IHC assessments. Comparisons utilized continuous laboratory units and statistically standardized z-scores. Univariate categorization of ER/PgR was by number of standard deviations (SD) above or below the mean (z-score ≥1.0 SD below mean; z-score 1.0 SD above mean). Exploratory multivariate examinations utilized step-wise Cox regression. Results: Median follow-up for MA.12 was 9.7 years; for BC patients, 11.8 years. For MA.12, 101 of 345 (29%) patients were IHC ER-PgR-. ER was not univariately associated with DFS (qPCR, P = 0.19; IHC, P = 0.08), while PgR was (qPCR, P = 0.09; IHC, P = 0.04). For BC patients, neither receptor was univariately associated with DFS: for ER, PCR, P = 0.36, IHC, P = 0.24; while for PgR, qPCR, P = 0.17, IHC, P = 0.31. Multivariately, MA.12 patients randomized to tamoxifen had significantly better DFS (P = 0.002 to 0.005) than placebo. Meanwhile, jointly ER and PgR were not associated with DFS whether assessed by qPCR or by IHC in all patients, or in the subgroup of patients with IHC positive stain, for pooled or separate treatment arms. Different results by type of continuous unit supported the concept of ER level being relevant for medical decision-making. For postmenopausal BC tamoxifen patients, higher qPCR PgR was weakly associated with better DFS (P = 0.06). Conclusions: MA.12 pre-menopausal patients in a placebo-controlled tamoxifen trial had similar multivariate prognostic effects with statistically standardized hormone receptors when tumours were assayed by qPCR or IHC, for hormone receptor +/- and + tumours. The BC post-menopausal tamoxifen cohort did not exhibit a significant prognostic association of ER or PgR with DFS. Adjunctive statistical standardization is currently under investigation in other NCIC CTG endocrine trials.
- Published
- 2013
27. Heterogeneity Between Ducts of the Same Nuclear Grade Involved by Duct Carcinoma In Situ (DCIS) of the Breast
- Author
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H. Lavina A. Lickley, David E. Axelrod, Jin Qian, Yuejiao Fu, Judith-Anne W. Chapman, William A. Christens-Barry, Naomi Miller, and Yan Yuan
- Subjects
Breast biopsy ,In situ ,Cancer Research ,Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Duct carcinoma ,nuclear grade ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,lcsh:RC254-282 ,Patient management ,image cytometry ,Oncology ,Medicine ,Image Cytometry ,In patient ,breast DCIS ,heterogeneity ,business ,Nuclear grade ,Grading (tumors) ,Original Research - Abstract
PurposeNuclear grade of breast DCIS is considered during patient management decision-making although it may have only a modest prognostic association with therapeutic outcome. We hypothesized that visual inspection may miss substantive differences in nuclei classified as having the same nuclear grade. To test this hypothesis, we measured subvisual nuclear features by quantitative image cytometry for nuclei with the same grade, and tested for statistical differences in these features.Experimental design and statistical analysisThirty-nine nuclear digital image features of about 100 nuclei were measured in digital images of HResultsStatistically significant differences were detected in nuclear features between ducts with the same nuclear grade, both in different ducts of the same patient, and between ducts in different patients with DCIS of more than one grade.ConclusionNuclei in ducts visually described as having the same nuclear grade had significantly different subvisual digital image features. These subvisual differences may be considered additional manifestations of heterogeneity over and above differences that can be observed microscopically. This heterogeneity may explain the inconsistency of nuclear grading as a prognostic factor.
- Published
- 2010
28. Cyclophosphamide, epirubicin, and Fluorouracil versus dose-dense epirubicin and cyclophosphamide followed by Paclitaxel versus Doxorubicin and cyclophosphamide followed by Paclitaxel in node-positive or high-risk node-negative breast cancer
- Author
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Vivien H.C. Bramwell, Edith A. Perez, Barbara Walley, Mark Levine, Kathleen I. Pritchard, Margot J. Burnell, Patti O'Brien, Karen A. Gelmon, Haji Chalchal, Kathy S. Albain, Theodore A. Vandenberg, Hope S. Rugo, Judith-Anne W. Chapman, and Lois E. Shepherd
- Subjects
Adult ,Cancer Research ,medicine.medical_specialty ,Cyclophosphamide ,Paclitaxel ,medicine.medical_treatment ,Breast Neoplasms ,Pharmacology ,Gastroenterology ,chemistry.chemical_compound ,Breast cancer ,Internal medicine ,Original Reports ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,Aged ,Epirubicin ,business.industry ,Lumpectomy ,Middle Aged ,medicine.disease ,Nitrogen mustard ,Oncology ,chemistry ,Fluorouracil ,Doxorubicin ,Lymphatic Metastasis ,Female ,Breast disease ,business ,Febrile neutropenia ,medicine.drug - Abstract
Purpose Cyclophosphamide, epirubicin, and fluorouracil (CEF) and doxorubicin and cyclophosphamide (AC) followed by paclitaxel (T) are commonly used adjuvant regimens in women with early breast cancer. In a previous trial in women with locally advanced breast cancer, 3 months of high-dose epirubicin and cyclophosphamide (EC) administered every 2 weeks (dose-dense) was equivalent to 6 months of CEF. We hypothesized that 3 months of paclitaxel after dose-dense EC (EC/T) would be superior to CEF or AC/T. Methods After lumpectomy or mastectomy, women 60 years of age or younger with axillary node-positive or high-risk node-negative breast cancer were randomly assigned to receive CEF, EC/T, or AC/T for 6 months. This article reports the interim analysis for recurrence-free survival (RFS), which was planned after 227 recurrences. Results A total of 2,104 patients were enrolled. The median follow-up is 30.4 months. Hazard ratios for recurrence are as follows: AC/T versus CEF, 1.49 (95% CI, 1.12 to 1.99), P = .005; AC/T versus EC/T, 1.68 (95% CI, 1.25 to 2.27), P = .0006; and EC/T versus CEF, 0.89 (95% CI, 0.64 to 1.22), P = .46. Three-year RFS rates for CEF, EC/T, and AC/T are 90.1%, 89.5%, and 85.0%, respectively. There was more febrile neutropenia with CEF (22.3%) and EC/T (16.4%) compared with AC/T (4.8%), but more neuropathy with the last two regimens. Conclusion Three-weekly AC/T is significantly inferior to CEF or EC/T in terms of RFS. It is too early to detect any difference between CEF and dose-dense EC/T.
- Published
- 2009
29. Effect of quantitative nuclear image features on recurrence of Ductal Carcinoma In Situ (DCIS) of the breast
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Jin Qian, Yan Yuan, Yuejiao Fu, Naomi Miller, H. Lavina A. Lickley, William A. Christens-Barry, David E. Axelrod, and Judith-Anne W. Chapman
- Subjects
Cancer Research ,medicine.medical_specialty ,Pathology ,Invasive carcinoma ,business.industry ,Clinical science ,Cancer ,nuclear grade ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,discriminant analysis ,lcsh:RC254-282 ,breast ductal carcinoma in situ ,image cytometry ,Oncology ,Ductal carcinoma in situ (DCIS) ,Cohort ,Digital image analysis ,Medicine ,Cancer gene ,Radiology ,business ,Nuclear grade ,Original Research - Abstract
Background Nuclear grade has been associated with breast DCIS recurrence and progression to invasive carcinoma; however, our previous study of a cohort of patients with breast DCIS did not find such an association with outcome. Fifty percent of patients had heterogeneous DCIS with more than one nuclear grade. The aim of the current study was to investigate the effect of quantitative nuclear features assessed with digital image analysis on ipsilateral DCIS recurrence. Methods Hematoxylin and eosin stained slides for a cohort of 80 patients with primary breast DCIS were reviewed and two fields with representative grade (or grades) were identified by a Pathologist and simultaneously used for acquisition of digital images for each field. Van Nuys worst nuclear grade was assigned, as was predominant grade, and heterogeneous grading when present. Patients were grouped by heterogeneity of their nuclear grade: Group A: nuclear grade 1 only, nuclear grades 1 and 2, or nuclear grade 2 only (32 patients), Group B: nuclear grades 1, 2 and 3, or nuclear grades 2 and 3 (31 patients), Group 3: nuclear grade 3 only (17 patients). Nuclear fine structure was assessed by software which captured thirty-nine nuclear feature values describing nuclear morphometry, densitometry, and texture. Step-wise forward Cox regressions were performed with previous clinical and pathologic factors, and the new image analysis features. Results Duplicate measurements were similar for 89.7% to 97.4% of assessed image features. The rate of correct classification of nuclear grading with digital image analysis features was similar in the two fields, and pooled assessment across both fields. In the pooled assessment, a discriminant function with one nuclear morphometric and one texture feature was significantly (p = 0.001) associated with nuclear grading, and provided correct jackknifed classification of a patient's nuclear grade for Group A (78.1%), Group B (48.4%), and Group C (70.6%). The factors significantly associated with DCIS recurrence were those previously found, type of initial presentation (p = 0.03) and amount of parenchymal involvement (p = 0.05), along with the morphometry image feature of ellipticity (p = 0.04). Conclusion Analysis of nuclear features measured by image cytometry may contribute to the classification and prognosis of breast DCIS patients with more than one nuclear grade.
- Published
- 2008
30. Competing Causes of Death From a Randomized Trial of Extended Adjuvant Endocrine Therapy for Breast Cancer
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Paul E. Goss, James N. Ingle, Daniel Meng, Hyman B. Muss, Wendy R. Parulekar, Lois E. Shepherd, Changhong Yu, Judith Anne W. Chapman, and Michael J. Palmer
- Subjects
Oncology ,Canada ,Cancer Research ,medicine.medical_specialty ,Neoplasms, Hormone-Dependent ,Antineoplastic Agents, Hormonal ,Breast Neoplasms ,Disease ,Disease-Free Survival ,Article ,Breast cancer ,Life Expectancy ,Double-Blind Method ,Risk Factors ,Internal medicine ,Cause of Death ,Nitriles ,medicine ,Humans ,Prospective Studies ,Prospective cohort study ,Osteoporosis, Postmenopausal ,Cause of death ,Aged ,Randomized Controlled Trials as Topic ,Gynecology ,business.industry ,Age Factors ,Cancer ,Middle Aged ,Triazoles ,medicine.disease ,Receptors, Estrogen ,Research Design ,Cardiovascular Diseases ,Chemotherapy, Adjuvant ,Cohort ,Letrozole ,Female ,Breast disease ,Receptors, Progesterone ,business ,Tamoxifen ,Follow-Up Studies ,medicine.drug - Abstract
Older women with early-stage breast cancer experience higher rates of non-breast cancer-related death. We examined factors associated with cause-specific death in a large cohort of breast cancer patients treated with extended adjuvant endocrine therapy.In the MA.17 trial, conducted by the National Cancer Institute of Canada Clinical Trials Group, 5170 breast cancer patients (median age = 62 years; range = 32-94 years) who were disease free after approximately 5 years of adjuvant tamoxifen treatment were randomly assigned to treatment with letrozole (2583 women) or placebo (2587 women). The median follow-up was 3.9 years (range 0-7 years). We investigated the association of 11 baseline factors with the competing risks of death from breast cancer, other malignancies, and other causes. All statistical tests were two-sided likelihood ratio criterion tests.During follow-up, 256 deaths were reported (102 from breast cancer, 50 from other malignancies, 100 from other causes, and four from an unknown cause). Non-breast cancer deaths accounted for 60% of the 252 known deaths (72% for thoseor = 70 years and 48% for those70 years). Two baseline factors were differentially associated with type of death: cardiovascular disease was associated with a statistically significant increased risk of death from other causes (P.002), and osteoporosis was associated with a statistically significant increased risk of death from other malignancies (P.05). An increased risk of breast cancer-specific death was associated with lymph node involvement (P.001). Increased risk of death from all three causes was associated with older age (P.001).Non-breast cancer-related deaths were more common than breast cancer-specific deaths in this cohort of 5-year breast cancer survivors, especially among older women.
- Published
- 2008
31. Disease-specific survival for limited-stage small-cell lung cancer affected by statistical method of assessment
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Fei Yuan, Judith-Anne W. Chapman, Lee Sang-Joon, Edward Yu, Dennie V. Jones, Patricia Tai, and Changhong Yu
- Subjects
Adult ,Male ,medicine.medical_specialty ,Superior Vena Cava Syndrome ,Cancer Research ,Multivariate analysis ,Lung Neoplasms ,Comorbidity ,lcsh:RC254-282 ,Cohort Studies ,Models ,Risk Factors ,Internal medicine ,medicine ,80 and over ,Confidence Intervals ,Genetics ,Humans ,Carcinoma, Small Cell ,Lung cancer ,Survival rate ,Survival analysis ,Aged ,Aged, 80 and over ,Models, Statistical ,business.industry ,Proportional hazards model ,Carcinoma ,Small Cell ,Middle Aged ,Statistical ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Survival Analysis ,Confidence interval ,Saskatchewan ,Surgery ,Survival Rate ,Oncology ,Lymphatic Metastasis ,Cohort ,Multivariate Analysis ,Female ,business ,Research Article ,Cohort study ,Follow-Up Studies - Abstract
Background In general, prognosis and impact of prognostic/predictive factors are assessed with Kaplan-Meier plots and/or the Cox proportional hazard model. There might be substantive differences from the results using these models for the same patients, if different statistical methods were used, for example, Boag log-normal (cure-rate model), or log-normal survival analysis. Methods Cohort of 244 limited-stage small-cell lung cancer patients, were accrued between 1981 and 1998, and followed to the end of 2005. The endpoint was death with or from lung cancer, for disease-specific survival (DSS). DSS at 1-, 3- and 5-years, with 95% confidence limits, are reported for all patients using the Boag, Kaplan-Meier, Cox, and log-normal survival analysis methods. Factors with significant effects on DSS were identified with step-wise forward multivariate Cox and log-normal survival analyses. Then, DSS was ascertained for patients with specific characteristics defined by these factors. Results The median follow-up of those alive was 9.5 years. The lack of events after 1966 days precluded comparison after 5 years. DSS assessed by the four methods in the full cohort differed by 0–2% at 1 year, 0–12% at 3 years, and 0–1% at 5 years. Log-normal survival analysis indicated DSS of 38% at 3 years, 10–12% higher than with other methods; univariate 95% confidence limits were non-overlapping. Surgical resection, hemoglobin level, lymph node involvement, and superior vena cava (SVC) obstruction significantly impacted DSS. DSS assessed by the Cox and log-normal survival analysis methods for four clinical risk groups differed by 1–6% at 1 year, 15–26% at 3 years, and 0–12% at 5 years; multivariate 95% confidence limits were overlapping in all instances. Conclusion Surgical resection, hemoglobin level, lymph node involvement, and superior vena cava (SVC) obstruction all significantly impacted DSS. Apparent DSS for patients was influenced by the statistical methods of assessment. This would be clinically relevant in the development or improvement of clinical management strategies.
- Published
- 2007
32. Ascertaining prognosis for breast cancer in node-negative patients with innovative survival analysis
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Kathleen I. Pritchard, David Murray, Maureen E. Trudeau, Carol Sawka, Wedad Hanna, H. Lavina A. Lickley, Harriette J. Kahn, B.G. Mobbs, Judith-Anne W. Chapman, and David R. McCready
- Subjects
Oncology ,medicine.medical_specialty ,Lymphovascular invasion ,Estrogen receptor ,Breast Neoplasms ,Disease-Free Survival ,Decision Support Techniques ,Cohort Studies ,Breast cancer ,Internal medicine ,Internal Medicine ,medicine ,Adjuvant therapy ,Humans ,Survival analysis ,Proportional Hazards Models ,Retrospective Studies ,Gynecology ,Ontario ,business.industry ,Proportional hazards model ,Carcinoma, Ductal, Breast ,Retrospective cohort study ,Middle Aged ,medicine.disease ,Prognosis ,Survival Analysis ,Carcinoma, Lobular ,Chemotherapy, Adjuvant ,Lymphatic Metastasis ,Surgery ,Female ,Lymph Nodes ,business ,Cohort study - Abstract
Clinical decisions to administer adjuvant systemic therapy to women with early breast cancer require knowledge about baseline prognosis, which is only assessable in the absence of such adjuvant treatment, which most patients currently do receive. The Cox model is the standard tool for assessing the effect of prognostic factors; however, there may be substantive differences in the estimated prognosis obtained by the Cox model rather than a log-normal model. For more than 50 years, clinical breast cancer data for cohorts of patients have supported the choice of a log-normal model. The prognostic impact of model type is examined here for a cohort of breast cancer patients, only 7% of whom received adjuvant systemic therapy. We quantitated prognosis utilizing Kaplan-Meier, Cox, and log-normal survival analyses for 415 consecutive T1-T3, M0, histologically node-negative patients who were operated on for primary breast cancer at Women's College Hospital between 1977 and 1986. Recurrence outside the breast for disease-free interval (DFI) and breast cancer death for disease-specific survival (DSS) were the events of interest. The patient follow-up for these investigations was 96% complete: a median 8 years for those surviving. Factors used in these investigations were age, weight, tumor size, histology, tumor grade, nuclear grade, lymphovascular invasion, estrogen receptor (ER), progesterone receptor (PR), combined ER/PR receptor, overexpression of neu oncoprotein, DNA ploidy, S-phase, and adjuvant therapy. In our study we found evidence against the Cox assumption of proportional hazards, which is not an assumption for the log-normal approach. We identified patients with greater than 96% and others with less than 40% DSS at 10 years. The difference in prognosis determined by using the Cox versus the log-normal model ranged for DFI from 1.2% to 8.1%, and for DSS from 0.4% to 6.2%; interestingly, the difference was more substantial for patients with a high risk of recurrence or death from breast cancer. Estimated prognoses may differ substantially by survival analysis model type, by amounts that might affect patient management, and we think that the log-normal model has a major advantage over the Cox model for survival analysis.
- Published
- 2006
33. Assessment of osteopontin in early breast cancer: correlative study in a randomised clinical trial
- Author
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Judith-Anne W. Chapman, Carl O. Postenka, Pieter H. Anborgh, Kathleen I. Pritchard, Lei Han, Waleed Al-Katib, Lois E. Shepherd, Michael Pollak, Alan B. Tuck, Carolyn F. Wilson, Vivien H.C. Bramwell, and Ann F. Chambers
- Subjects
Oncology ,CA15-3 ,medicine.medical_specialty ,Antineoplastic Agents, Hormonal ,Breast Neoplasms ,Octreotide ,Disease-Free Survival ,Breast cancer ,stomatognathic system ,Surgical oncology ,Internal medicine ,medicine ,Biomarkers, Tumor ,Humans ,Osteopontin ,Medicine(all) ,biology ,business.industry ,Middle Aged ,medicine.disease ,Metastatic breast cancer ,Primary tumor ,Clinical trial ,Tamoxifen ,biology.protein ,Female ,Neoplasm Recurrence, Local ,business ,medicine.drug ,Research Article - Abstract
Introduction Osteopontin (OPN) is a malignancy-associated glycoprotein that contributes functionally to tumor aggressiveness. In metastatic breast cancer, we previously demonstrated that elevated OPN in primary tumor and blood was associated with poor prognosis. Methods We measured OPN in plasma by ELISA, and in tumors by immunohistochemistry, in 624 (94%) and 462 (69%), respectively, of 667 postmenopausal women with hormone responsive early breast cancer treated by surgery followed by adjuvant treatment with tamoxifen +/− octreotide in a randomized trial (NCIC CTG MA.14; National Cancer Institute of Canada Clinical Trials Group Mammary.14). Results Plasma OPN was measured in 2,540 samples; 688 at baseline and 1,852 collected during follow-up. Mean baseline plasma OPN was 46 ng/ml (range 22.6 to 290) which did not differ from normal levels. Mean percentage OPN tumor cell positivity was 33.9 (95% CI: 30.2 to 37.9). There was no correlation between plasma and tumor OPN values. In multivariate analysis, neither was associated with event-free survival (EFS), relapse-free survival (RFS), overall survival (OS), bone RFS or non-bone RFS. An exploratory analysis in patients with recurrence showed higher mean OPN plasma levels 60.7 ng/ml (23.9 to 543) in the recurrence period compared with baseline levels. Conclusions The hypothesis that OPN tumor expression would have independent prognostic value in early breast cancer was not supported by multivariate analysis of this study population. Plasma OPN levels in women with hormone responsive early breast cancer in the MA.14 trial were not elevated and there was no evidence for prognostic value of plasma OPN in this defined group of patients. However, our finding of elevated mean OPN plasma level around the time of recurrence warrants further study. Trial registration NCT00002864, http://clinicaltrials.gov/show/NCT00002864
- Published
- 2014
34. Measurement of baseline serum SDF-1 levels as a predictive biomarker for outcomes in the NCIC CTG MA.14 trial of octreotide, a somatostatin analogue in postmenopausal breast cancer
- Author
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Judith-Anne W. Chapman, Carolyn F. Wilson, K. Jahan, Mark Basik, Adriana Aguilar-Mahecha, Lois E. Shepherd, Liting Zhu, S. Hassan, Kathleen I. Pritchard, and Michael Pollak
- Subjects
Oncology ,Cancer Research ,Chemokine ,medicine.medical_specialty ,Stromal cell ,biology ,business.industry ,Octreotide ,medicine.disease ,Breast tumor ,Metastasis ,Somatostatin Analogue ,Breast cancer ,Internal medicine ,biology.protein ,medicine ,skin and connective tissue diseases ,business ,medicine.drug ,Predictive biomarker - Abstract
577 Background: Stromal cell derived-factor 1 (SDF-1) is a chemokine implicated in breast tumor growth and metastasis. Blood SDF-1 levels have a significant prognostic value in primary breast cance...
- Published
- 2011
35. Reply to C.D. Atkins
- Author
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Judith-Anne W. Chapman, Lois E. Shepherd, Patti O'Brien, Margot J. Burnell, and Mark Levine
- Subjects
Cancer Research ,Oncology ,business.industry ,Medicine ,Theology ,business - Published
- 2010
36. Use of serum SDF-1 as a predictive biomarker for outcomes in the NCIC CTG MA.14 trial of octreotide, a somatostatin analogue in postmenopausal breast cancer
- Author
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Judith-Anne W. Chapman, Lois E. Shepherd, Kathleen I. Pritchard, K. Jahan, Carolyn F. Wilson, Mark Basik, Adriana Aguilar-Mahecha, Lei Han, S. Hassan, and Michael Pollak
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,Chemokine ,Stromal cell ,biology ,business.industry ,Octreotide ,medicine.disease ,Breast tumor ,Metastasis ,Somatostatin Analogue ,Breast cancer ,Endocrinology ,Internal medicine ,medicine ,biology.protein ,business ,medicine.drug ,Predictive biomarker - Abstract
551 Background: Stromal cell derived-factor 1 (SDF-1) is a chemokine implicated in various aspects of breast tumor growth and metastasis. Blood SDF-1 levels have a significant prognostic value in p...
- Published
- 2010
37. Examination of TIMP-1 Levels and Relapse-Free Survival for Patients in NCIC CTG MA.14 Who Received Adjuvant Tamoxifen +/- Octreotide LAR
- Author
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Suhail M. Ali, Judith-Anne W. Chapman, Allan Lipton, Carolyn F. Wilson, X. Pu, Kim Leitzel, Kathleen I. Pritchard, Michael Pollak, Lois E. Shepherd, and Walter P. Carney
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,Chemotherapy ,Adjuvant tamoxifen ,business.industry ,medicine.medical_treatment ,Cancer ,medicine.disease ,Relapse free survival ,Octreotide lar ,Surgery ,medicine.anatomical_structure ,Internal medicine ,medicine ,Endocrine system ,business ,Lymph node ,Adjuvant - Abstract
Background: Tissue inhibitor of metalloproteinase-1 (TIMP-1) has been shown to have diverse multifunctional roles in tumorigenesis. AL/KL/SA postulated from first line metastatic endocrine therapy that elevated pre-treatment serum TIMP-1 required additional therapy. NCIC CTG MA.14 adjuvant endocrine trial permitted examination of whether TIMP-1 serum levels post-chemotherapy was associated with RFS. Methods: NCIC CTG MA.14 is a trial where 667 postmenopausal patients were randomized to receive adjuvant tamoxifen +/- octreotide LAR with a stratification factor of no, concurrent or sequential chemotherapy. For the purposes of this work, this was simplified to whether a patient had or had not received adjuvant chemotherapy prior to the serum draw. Serum TIMP-1 was assessed on >90% of the trial patients. We examined the effect of baseline TIMP-1 levels on relapse-free survival (RFS) of 1) all types, 2) bone only, 3) all types of bone, and 4) non-bone, by timing of chemotherapy before the serum draw utilizing continuous TIMP (ng/ml) and categorical TIMP (454 ng/ml, based on 95% non-parametric cut-point for healthy post-menopausal females). Data were available on patient and tumour characteristics of age (years), pathologic tumour size (cm), pathologic lymph node status (# nodes), IGF-1, C-peptide, IGFBP-3. Step-wise forward Cox multivariate models were used where a factor was added if p Citation Information: Cancer Res 2009;69(24 Suppl):Abstract nr 3022.
- Published
- 2009
38. Infiltrating breast carcinoma smaller than 0.5 centimeters
- Author
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Edward B. Fish, Judith-Anne W. Chapman, Marilyn A. Link, and Richard Gordon
- Subjects
Cancer Research ,Centimeter ,Pathology ,medicine.medical_specialty ,Oncology ,business.industry ,medicine ,Infiltrating Breast Carcinoma ,business - Published
- 1999
39. Letter to the Editor
- Author
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Frank E. Gump, Judith-Anne W. Chapman, Naomi A. Miller, H. Lavina A. Lickley, Wedad M. Hanna, David R. McCready, Marilyn A. Link Eve Fishell, Barbara Wright, George Y. Hiraki, Theodore M. Ross, and Edward B. Fish
- Subjects
In situ ,Oncology ,medicine.medical_specialty ,Primary (chemistry) ,business.industry ,Surgical oncology ,Internal medicine ,medicine ,Surgery ,Ductal carcinoma ,business - Published
- 1999
40. Use of elevated bone turnover to predict bone metastasis
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Kim Leitzel, Suhail M. Ali, Lei Han, Laurence M. Demers, Lois E. Shepherd, Kathleen I. Pritchard, Carolyn F. Wilson, Michael Pollak, Judith-Anne W. Chapman, and Allan Lipton
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,business.industry ,Bone metastasis ,Octreotide ,medicine.disease ,Bone resorption ,Bone remodeling ,Surgery ,Breast cancer ,medicine.anatomical_structure ,N-terminal telopeptide ,Internal medicine ,medicine ,business ,Lymph node ,Tamoxifen ,medicine.drug - Abstract
591 Background: A favorable “soil” has been suggested as an important factor for the growth of cancer cells. In this study, the ability of pretreatment serum beta C-terminal telopeptide (B-CTx) of type I collagen, a marker of bone resorption, to predict breast cancer relapse in bone was investigated in a randomized adjuvant breast cancer trial. Methods: Serum B-CTx concentration (Serum CrossLaps, Nordic Biosciences, Copenhagen, DN) was determined in pretreatment serum from 621 of 667 primary breast cancer patients enrolled in the NCIC CTG MA.14 phase III adjuvant clinical trial of tamoxifen (20 mg po daily, 323 pts.) ± octreotide (90 mg mo. for 2 years, 298 pts.) which has recently had its final analysis. Stratification was by administration of adjuvant chemotherapy, axillary lymph node status, and ER and/or PR status. Recurrence-free survival (RFS) was a secondary endpoint defined as the time from randomization to the time of recurrence of the primary disease alone; the focus here was bone-only recurrenc...
- Published
- 2008
41. NCIC-CTG MA14 Trial: Tamoxifen (tam) vs. tam + octreotide (oct) for adjuvant treatment of stage I or II postmenopausal breast cancer
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Timothy J. Whelan, B. Norris, T. Vandenberg, Kathleen I. Pritchard, Michael Pollak, H. S. Dhaliwal, James E. Krook, Lois E. Shepherd, Carolyn F. Wilson, and Judith-Anne W. Chapman
- Subjects
Oncology ,Gynecology ,Cancer Research ,medicine.medical_specialty ,Randomization ,business.industry ,Proportional hazards model ,medicine.medical_treatment ,Cancer ,Octreotide ,medicine.disease ,Breast cancer ,Internal medicine ,medicine ,Clinical endpoint ,business ,Adjuvant ,Tamoxifen ,medicine.drug - Abstract
532 Background: Our preclinical data (Cancer Res. 54:6334,1994) suggested mechanisms involving insulin/IGF physiology by which a somatostatin analogue + tam combination might be superior to tam alone for adjuvant BC therapy. Methods: In 1996, we began a Phase 3 trial randomizing stage I or II postmenopausal BC patients to tam 20mg daily for 5 yr with or without oct (monthly 90mg depot injection) for 5 yr, later reduced to 2 yr due to concern regarding cholelithiasis. Stratification factors included adjuvant chemotherapy, axillary nodal status, and ER status. Primary endpoint was event-free survival (EFS), defined as time from randomization to recurrence, second malignancy, or death due to any cause, assessed with the adjusted log-rank test statistic and an adjusted step-wise forward Cox regression. Objectives included studies of relevant biomarkers in relation to treatment and outcomes. Results: 667 women were accrued (333 to tam, 334 to tam +oct), with a median follow-up of 7.9 years and 220 events: 112 ...
- Published
- 2008
42. Ductal carcinoma in situ of the breast (DCIS) with heterogeneity of nuclear grade: prognostic effects of quantitative nuclear assessment
- Author
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William A. Christens-Barry, Naomi Miller, Yan Yuan, Yuejiao Fu, H. Lavina A. Lickley, Judith-Anne W. Chapman, Jin Qian, and David E. Axelrod
- Subjects
Oncology ,medicine.medical_specialty ,Multivariate statistics ,Cancer Research ,Cell Nucleus Shape ,medicine.medical_treatment ,Breast ductal carcinoma in situ ,Breast Neoplasms ,Kaplan-Meier Estimate ,lcsh:RC254-282 ,Image analysis ,Nuclear grade ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Discriminant function analysis ,Internal medicine ,Genetics ,Image Processing, Computer-Assisted ,Medicine ,Humans ,Neoplasm Invasiveness ,Grading (tumors) ,030304 developmental biology ,Cancer ,Cell Nucleus ,0303 health sciences ,business.industry ,Lumpectomy ,Carcinoma, Ductal, Breast ,Ductal carcinoma ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Prognosis ,030220 oncology & carcinogenesis ,Female ,Radiology ,Neoplasm Recurrence, Local ,business ,Densitometry ,Research Article - Abstract
Background Previously, 50% of patients with breast ductal carcinoma in situ (DCIS) had more than one nuclear grade, and neither worst nor predominant nuclear grade was significantly associated with development of invasive carcinoma. Here, we used image analysis in addition to histologic evaluation to determine if quantification of nuclear features could provide additional prognostic information and hence impact prognostic assessments. Methods Nuclear image features were extracted from about 200 nuclei of each of 80 patients with DCIS who underwent lumpectomy alone, and received no adjuvant systemic therapy. Nuclear images were obtained from 20 representative nuclei per duct, from each of a group of 5 ducts, in two separate fields, for 10 ducts. Reproducibility of image analysis features was determined, as was the ability of features to discriminate between nuclear grades. Patient information was available about clinical factors (age and method of DCIS detection), pathologic factors (DCIS size, nuclear grade, margin size, and amount of parenchymal involvement), and 39 image features (morphology, densitometry, and texture). The prognostic effects of these factors and features on the development of invasive breast cancer were examined with Cox step-wise multivariate regression. Results Duplicate measurements were similar for 89.7% to 97.4% of assessed image features. For the pooled assessment with ~200 nuclei per patient, a discriminant function with one densitometric and two texture features was significantly (p < 0.001) associated with nuclear grading, and provided 78.8% correct jackknifed classification of a patient's nuclear grade. In multivariate assessments, image analysis nuclear features had significant prognostic associations (p ≤ 0.05) with the development of invasive breast cancer. Texture (difference entropy, p < 0.001; contrast, p < 0.001; peak transition probability, p = 0.01), densitometry (range density, p = 0.004), and measured margin (p = 0.05) were associated with development of invasive disease for the pooled data across all ducts. Conclusion Image analysis provided reproducible assessments of nuclear features which quantitated differences in nuclear grading for patients. Quantitative nuclear image features indicated prognostically significant differences in DCIS, and may contribute additional information to prognostic assessments of which patients are likely to develop invasive disease.
- Published
- 2007
43. A Comparison of theX2, −2 LogR, and Multinomial Probability Criteria for Significance Tests When Expected Frequencies are Small
- Author
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Judith-Anne W. Chapman
- Subjects
Statistics and Probability ,Combinatorics ,Multinomial test ,Statistics ,Multinomial distribution ,Statistics, Probability and Uncertainty ,Mathematics - Abstract
The exact multinomial, and exact and χ2 probabilities for χ2 and −2 log R have been compared. The −2 log R χ 2 probabilities are on average closer to the multinomial than are the corresponding χ2 probabilities. The differences between the exact and χ2 probabilities are usually smaller for χ2 than for −2 log R. A pattern was observed among the five types of significance levels, and an explanation was proposed.
- Published
- 1976
44. A Comparison of the X 2 , -2 \Log R, and Multinomial Probability Criteria for Significance Tests when Expected Frequencies Are Small
- Author
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Judith-Anne W. Chapman
- Subjects
Statistics and Probability ,Statistics, Probability and Uncertainty - Published
- 1976
45. Lapatinib or Trastuzumab Plus Taxane Therapy for Human Epidermal Growth Factor Receptor 2-Positive Advanced Breast Cancer: Final Results of NCIC CTG MA.31.
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Gelmon KA, Boyle FM, Kaufman B, Huntsman DG, Manikhas A, Di Leo A, Martin M, Schwartzberg LS, Lemieux J, Aparicio S, Shepherd LE, Dent S, Ellard SL, Tonkin K, Pritchard KI, Whelan TJ, Nomikos D, Nusch A, Coleman RE, Mukai H, Tjulandin S, Khasanov R, Rizel S, Connor AP, Santillana SL, Chapman JA, and Parulekar WR
- Subjects
- Adult, Aged, Antibodies, Monoclonal, Humanized administration & dosage, Breast Neoplasms pathology, Bridged-Ring Compounds administration & dosage, Diarrhea chemically induced, Disease-Free Survival, Drug Administration Schedule, Drug Eruptions etiology, Female, Follow-Up Studies, Humans, International Cooperation, Kaplan-Meier Estimate, Lapatinib, Middle Aged, Neoplasm Staging, Patient Selection, Quality of Life, Quinazolines administration & dosage, Quinazolines adverse effects, Taxoids administration & dosage, Trastuzumab, Treatment Outcome, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Biomarkers, Tumor analysis, Breast Neoplasms chemistry, Breast Neoplasms drug therapy, Receptor, ErbB-2 analysis
- Abstract
Purpose: The efficacy of lapatinib versus trastuzumab combined with taxanes in the first-line setting of human epidermal growth factor receptor 2 (HER2) -positive metastatic breast cancer (BC) is unknown., Patients and Methods: The MA.31 trial compared a combination of first-line anti-HER2 therapy (lapatinib or trastuzumab) and taxane therapy for 24 weeks, followed by the same anti-HER2 monotherapy until progression. Stratification was by prior (neo)adjuvant anti-HER2 therapy, prior (neo)adjuvant taxane, planned taxane, and liver metastases. The primary end point was intention-to-treat (ITT) progression-free survival (PFS), defined as time from random assignment to progression by RECIST (version 1.0) criteria, or death for patients with locally assessed HER2-positive tumors. The primary test statistic was a stratified log-rank test for noninferiority. PFS was also assessed for patients with centrally confirmed HER2-positive tumors., Results: From July 17, 2008, to December 1, 2011, 652 patients were accrued from 21 countries, resulting in 537 patients with centrally confirmed HER2-positive tumors. Median follow-up was 21.5 months. Median ITT PFS was 9.0 months with lapatinib and 11.3 months with trastuzumab. By ITT analysis, PFS was inferior for lapatinib compared with trastuzumab, with a stratified hazard ratio (HR) of 1.37 (95% CI, 1.13 to 1.65; P = .001). In patients with centrally confirmed HER2-positive tumors, median PFS was 9.1 months with lapatinib and 13.6 months with trastuzumab (HR, 1.48; 95% CI, 1.20 to 1.83; P < .001). More grade 3 or 4 diarrhea and rash were observed with lapatinib (P < .001). PFS results were supported by the secondary end point of overall survival, with an ITT HR of 1.28 (95% CI, 0.95 to 1.72; P = .11); in patients with centrally confirmed HER2-positive tumors, the HR was 1.47 (95% CI, 1.03 to 2.09; P = .03)., Conclusion: As first-line therapy for HER2-positive metastatic BC, lapatinib combined with taxane was associated with shorter PFS and more toxicity compared with trastuzumab combined with taxane., (© 2015 by American Society of Clinical Oncology.)
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- 2015
- Full Text
- View/download PDF
46. Treatment-associated musculoskeletal and vasomotor symptoms and relapse-free survival in the NCIC CTG MA.27 adjuvant breast cancer aromatase inhibitor trial.
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Stearns V, Chapman JA, Ma CX, Ellis MJ, Ingle JN, Pritchard KI, Budd GT, Rabaglio M, Sledge GW, Le Maitre A, Kundapur J, Liedke PE, Shepherd LE, and Goss PE
- Subjects
- Adult, Aged, Anastrozole, Androstadienes administration & dosage, Aromatase Inhibitors administration & dosage, Breast Neoplasms surgery, Chemotherapy, Adjuvant, Disease-Free Survival, Female, Hot Flashes chemically induced, Humans, Kaplan-Meier Estimate, Middle Aged, Nitriles administration & dosage, Triazoles administration & dosage, Androstadienes adverse effects, Antineoplastic Agents, Hormonal adverse effects, Aromatase Inhibitors adverse effects, Breast Neoplasms drug therapy, Musculoskeletal System drug effects, Nitriles adverse effects, Triazoles adverse effects, Vasomotor System drug effects
- Abstract
Purpose: Treatment-emergent symptoms with adjuvant tamoxifen and aromatase inhibitors (AIs) have been associated with superior recurrence-free survival (RFS). We hypothesized that MA.27 anastrozole- or exemestane-treated patients with new or worsening vasomotor and/or joint symptoms would have improved RFS., Patients and Methods: MA.27 randomly assigned 7,576 postmenopausal women with breast cancer to 5 years of anastrozole or exemestane. Patient-reported symptoms were collected using the Common Terminology Criteria for Adverse Events version 3.0 at protocol-specified baseline and 6- and 12-month clinical visits. Symptoms were considered present with either vasomotor and/or joint complaints. Associations between symptoms and baseline patient characteristics were examined with χ(2) and Fisher's exact tests. Subsequent effects of new or worsening symptoms on RFS were examined with landmark analyses and stratified univariable and multivariable Cox models. We examined the effects of 3-month symptoms arising from unplanned clinic visits as a result of severe toxicity., Results: Patients were assessable if eligible for the MA.27 trial, received some trial therapy, and had no disease recurrence at the end of a symptom assessment period; 96% of patients (n = 7,306 patients) were included at 6 months, and 96% (n = 7,246) were included at 12 months. Thirty-four percent of patients had baseline symptoms. For patients without baseline symptoms, 25% and 52% had new symptoms by 6 and 12 months, respectively. Neither treatment-emergent nor baseline symptoms significantly impacted RFS (P > .10) in patients with or without baseline symptoms., Conclusion: In MA.27, anastrozole or exemestane treatment-emergent symptoms were not associated with improved RFS. Women should be supported through treatment and encouraged to remain on their AI regardless of their symptoms., (© 2014 by American Society of Clinical Oncology.)
- Published
- 2015
- Full Text
- View/download PDF
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