103 results on '"KIF6"'
Search Results
2. KIF6 Trp719Arg Genetic Variant Increases Risk for Thoracic Aortic Dissection.
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Velasco, Juan J., Li, Yupeng, Ziganshin, Bulat A., Zafar, Mohammad A., Rizzo, John A., Ma, Deqiong, Zang, Hui, Kalyanasundaram, Asanish, and Elefteriades, John A.
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AORTIC dissection , *THORACIC aneurysms , *GENETIC variation , *DISSECTING aneurysms , *NATURAL history - Abstract
Background: KIF6 (kinesin family member 6), a protein coded by the KIF6 gene, serves an important intracellular function to transport organelles along microtubules. In a pilot study, we found that a common KIF6 Trp719Arg variant increased the propensity of thoracic aortic aneurysms (TAA) to suffer dissection (AD). The present study aims for a definite investigation of the predictive ability of KIF6 719Arg vis à vis AD. Confirmatory findings would enhance natural history prediction in TAA. Methods: 1108 subjects (899 aneurysm and 209 dissection patients) had KIF6 719Arg variant status determined. Results: The 719Arg variant in the KIF6 gene correlated strongly with occurrence of AD. Specifically, KIF6 719Arg positivity (homozygous or heterozygous) was substantially more common in dissectors (69.8%) than non-dissectors (58.5%) (p = 0.003). Odds ratios (OR) for suffering aortic dissection ranged from 1.77 to 1.94 for Arg carriers in various dissection categories. These high OR associations were noted for both ascending and descending aneurysms and for homozygous and heterozygous Arg variant patients. The rate of aortic dissection over time was significantly higher for carriers of the Arg allele (p = 0.004). Additionally, Arg allele carriers were more likely to reach the combined endpoint of dissection or death (p = 0.03). Conclusions: We demonstrate the marked adverse impact of the 719Arg variant of the KIF6 gene on the likelihood that a TAA patient will suffer aortic dissection. Clinical assessment of the variant status of this molecularly important gene may provide a valuable "non-size" criterion to enhance surgical decision making above and beyond the currently used metric of aortic size (diameter). [ABSTRACT FROM AUTHOR]
- Published
- 2023
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3. Motor protein Kif6 regulates cilia motility and polarity in brain ependymal cells.
- Author
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Takagishi M, Yue Y, Gray RS, Verhey KJ, and Wallingford JB
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- Humans, Brain metabolism, Dyneins metabolism, Ependyma, Cilia metabolism, Kinesins metabolism
- Abstract
Motile cilia on ependymal cells that line brain ventricular walls beat in concert to generate a flow of laminar cerebrospinal fluid (CSF). Dyneins and kinesins are ATPase microtubule motor proteins that promote the rhythmic beating of cilia axonemes. Despite common consensus about the importance of axonemal dynein motor proteins, little is known about how kinesin motors contribute to cilia motility. Here, we show that Kif6 is a slow processive motor (12.2±2.0 nm/s) on microtubules in vitro and localizes to both the apical cytoplasm and the axoneme in ependymal cells, although it does not display processive movement in vivo. Using a mouse mutant that models a human Kif6 mutation in a proband displaying macrocephaly, hypotonia and seizures, we found that loss of Kif6 function causes decreased ependymal cilia motility and, subsequently, decreases fluid flow on the surface of brain ventricular walls. Disruption of Kif6 also disrupts orientation of cilia, formation of robust apical actin networks and stabilization of basal bodies at the apical surface. This suggests a role for the Kif6 motor protein in the maintenance of ciliary homeostasis within ependymal cells., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2024. Published by The Company of Biologists Ltd.)
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- 2024
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4. KIF6 Trp719Arg Genetic Variant Increases Risk for Thoracic Aortic Dissection
- Author
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Juan J. Velasco, Yupeng Li, Bulat A. Ziganshin, Mohammad A. Zafar, John A. Rizzo, Deqiong Ma, Hui Zang, Asanish Kalyanasundaram, and John A. Elefteriades
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Genetics ,Genetics (clinical) ,aortic dissection ,KIF6 ,kinesin ,aortic aneurysm ,ascending aorta ,risk prediction - Abstract
Background: KIF6 (kinesin family member 6), a protein coded by the KIF6 gene, serves an important intracellular function to transport organelles along microtubules. In a pilot study, we found that a common KIF6 Trp719Arg variant increased the propensity of thoracic aortic aneurysms (TAA) to suffer dissection (AD). The present study aims for a definite investigation of the predictive ability of KIF6 719Arg vis à vis AD. Confirmatory findings would enhance natural history prediction in TAA. Methods: 1108 subjects (899 aneurysm and 209 dissection patients) had KIF6 719Arg variant status determined. Results: The 719Arg variant in the KIF6 gene correlated strongly with occurrence of AD. Specifically, KIF6 719Arg positivity (homozygous or heterozygous) was substantially more common in dissectors (69.8%) than non-dissectors (58.5%) (p = 0.003). Odds ratios (OR) for suffering aortic dissection ranged from 1.77 to 1.94 for Arg carriers in various dissection categories. These high OR associations were noted for both ascending and descending aneurysms and for homozygous and heterozygous Arg variant patients. The rate of aortic dissection over time was significantly higher for carriers of the Arg allele (p = 0.004). Additionally, Arg allele carriers were more likely to reach the combined endpoint of dissection or death (p = 0.03). Conclusions: We demonstrate the marked adverse impact of the 719Arg variant of the KIF6 gene on the likelihood that a TAA patient will suffer aortic dissection. Clinical assessment of the variant status of this molecularly important gene may provide a valuable “non-size” criterion to enhance surgical decision making above and beyond the currently used metric of aortic size (diameter).
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- 2023
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5. Genotype-Guided Statin Therapy
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Seip, Richard L., Duconge, Jorge, Ruaño, Gualberto, Wu, Alan H. B., editor, and Yeo, Kiang-Teck J., editor
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- 2011
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6. EVALUATION OF THE GENETIC RISKOMETER COMPONENTS KIF6, PALLD, SNX19, MYH15, VAMP8 FOR ISCHEMIC HEART DISEASE WITH SUDDEN CARDIAC DEATH
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V. N. Мaksimov, A. A. Ivanova, P. S. Orlov, S. V. Savchenko, and M. I. Voevoda
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sudden cardiac death ,mononucleotide polymorphism ,riskometer ,gene rs20455 ,kif6 ,rs7439293 ,palld ,rs2298566 ,snx19 ,rs3900940 ,myh15 ,rs1010 ,vamp8 ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Aim. The study of mononucleotide polymorphisms associations rs20455 gene KIF6, rs7439293 gene PALLD, rs2298566 gene SNX19, rs3900940 gene MYH15, rs1010 gene VAMP8, included into the Riskometer of ischemic heart disease of the Celera Corporation (USA), in sudden cardiac death.Material and methods. To the study the group of persons included, died from sudden cardiac death, according to the WHO criteria (n=352, mean age — 53,3±8,9 y.), control group from matched by age and gender from DNA bank of HAPIEE, MONICA studies (n=381, mean age — 53,1±8,3 y.), adolescents group (n=296, mean age — 15,6±0,9 y.). DNA extracted via the phenol-chloroform extraction from myocardium of the dyed due to sudden cardiac death, and from venous blood of controls. Genotyping performed with Real-time PCR method using the Taq-Mancatheters technology (Applied Biosystems).Results. The prevalence of alleles rs7439293 gene PALLD, rs2298566 gene SNX19, rs3900940 gene MYH15 did not statistically significantly differ among the groups. In those died suddenly older than 50 years, there was significant decrease of carriers of GG polymorphism rs20455 gene KIF6 (9,0%) comparing to the controls (17,8%) (р=0,009, OR=0,456, 95% CI 0,256-0,810). In men older 50, died suddenly, there was significant decrease of the carriers of genotype СС (8,0%) (р=0,002, OR=0,328, 95% CI 0,159-0,678) and increase of СТ genotype (49,6%) (р=0,025, OR=1,729, 95% CI 1,084-2,758) polymorphism rs1010 gene VAMP8 comparing to the controls (21,0%, 36,3%, respectively). Conclusion. Polymorphisms rs20455 gene KIF6 and rs1010 gene VAMP8 are associated with sudden cardiac death.
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- 2015
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7. Pharmacogenomic variants affecting efficacy and toxicity of statins in a south Asian population from Sri Lanka.
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Ranasinghe P, Sirisena N, Ariadurai JN, Vishnukanthan T, Thilakarathne S, Anandagoda G, and Dissanayake VH
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- Humans, Pharmacogenomic Variants, Sri Lanka epidemiology, Cytochrome P-450 CYP2C9 genetics, Gene Frequency genetics, Polymorphism, Single Nucleotide genetics, Liver-Specific Organic Anion Transporter 1 genetics, Hydroxymethylglutaryl-CoA Reductase Inhibitors adverse effects
- Abstract
Aim: To describe the diversity of pharmacogenetic variants of statins among Sri Lankans. Materials & methods: Variant data of relevant genes were obtained from an anonymized database of 426 Sri Lankans. Minor allele frequencies (MAFs) were compared with published data from other populations. Results: The MAF of SLCO1B1*5 (rs4149056 [T>C]) was 18.19% (95% CI: 14.53-21.85). MAFs of CYP2C9*2 (rs1799853 [C>T]) and CYP2C9*3 (rs1057910 [A>C]) were 2.58% (95% CI: 1.08-4.08) and 10.30% (95% CI: 7.75-13.61), respectively. MAFs of rs2231142 (G>T) ( ABCG2 ), rs7412 (C>T) ( APOE ) and rs20455 (A>G) ( KIF6 ) variants were 10.68% (95% CI: 7.76-13.60), 3.52% (95% CI: 1.77-5.27) and 50.7% (95% CI: 45.96-55.45), respectively. Compared with western/other Asian populations, rs20455 (A>G), CYP2C9*3 (A>C) and SLCO1B1*5 (T>C) variants were significantly higher in Sri Lankans. Conclusion: Variants that affect efficacy of statins ( KIF6 [rs20455], CYP2C9*3 ) and increase risk of statin-induced myotoxicity ( SLCO1B1*5 and CYP2C9*3 ) were prevalent in higher frequencies among Sri Lankans compared with western populations.
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- 2023
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8. Relationship between Lipid Phenotypes, Overweight, Lipid Lowering Drug Response and KIF6 and HMG-CoA Genotypes in a Subset of the Brisighella Heart Study Population.
- Author
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Angelini, Sabrina, Rosticci, Martina, Massimo, Gianmichele, Musti, Muriel, Ravegnini, Gloria, Consolini, Nicola, Sammarini, Giulia, D’Addato, Sergio, Rizzoli, Elisabetta, Botbayev, Dauren, Borghi, Claudio, Cantelli-Forti, Giorgio, Cicero, Arrigo F., and Hrelia, Patrizia
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HYPERCHOLESTEREMIA , *BLOOD cholesterol , *STATINS (Cardiovascular agents) , *HEART diseases , *HIGH density lipoproteins , *BLOOD lipoproteins - Abstract
The existence of genetic traits might explain the susceptibility to develop hypercholesterolemia and the inter-individual differences in statin response. This study was performed to evaluate whether individuals' polymorphisms in HMG-CoA and KIF6 genes are independently associated with hypercholesterolemia, other lipid-associated traits, and statin response in unselected individuals enrolled in the Brisighella heart study (Survey 2012). A total of 1622 individuals, of which 183 under statin medication, were genotyped for a total of five polymorphisms (KIF6 rs20455, rs9471077, rs9462535; HMG-CoA rs3761740, rs3846662). The relationships between the five loci and clinical characteristics were analyzed. The principal basic parameters calculated on 12 h fasting blood included total cholesterol (TC), High Density Lipoprotein Cholesterol (HDL-C), Low-Density Lipoprotein Cholesterol (LDL-C), and triglycerides (TG). Hypercholesterolemia was defined as a TC >200 mg/dL or use of lipid-lowering medication. 965 individuals were characterized by hypercholesterolemia; these subjects were significantly older (p < 0.001), with body mass index (BMI) and waist circumference significantly higher (p < 0.001) compared to the others. HMG-CoA rs3846662 GG genotype was significantly over-represented in the hypercholesterolemic group (p = 0.030). HMG-CoA rs3846662 genotype was associated with the level of TC and LDL-C. Furthermore, in the same subset of untreated subjects, we observed a significant correlation between the KIF6 rs20455 and HDL-C. KIF6 variants were associated with a significantly lower (rs20455) or higher (rs9471077 and rs9462535) risk of obesity, in males only. No association between responsiveness to statins and the polymorphisms under investigation were observed. Our results showed associations between HMG-CoA rs3846662 and KIF6 rs20455 and lipid phenotypes, which may have an influence on dyslipidemia-related events. Moreover, this represents the first study implicating KIF6 variants with obesity in men, and point to the possible involvement of this genetic locus in the known gender-related differences in coronary artery disease. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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9. Are KIF6 and APOE polymorphisms associated with power and endurance athletes?
- Author
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Kinga Humińska-Lisowska, Agnieszka Maciejewska-Skrendo, Paweł Cięszczyk, Monika Michałowska-Sawczyn, M-J Nancy Laguette, Jakub Chycki, Agata Leońska-Duniec, Alison V. September, Marek Sawczuk, Grzegorz Trybek, Krzysztof Ficek, Mariusz Kaczmarczyk, and Bartosz Wojciechowicz
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Apolipoprotein E ,biology ,business.industry ,Athletes ,Cardiovascular health ,Physical Therapy, Sports Therapy and Rehabilitation ,Context (language use) ,General Medicine ,biology.organism_classification ,Bioinformatics ,KIF6 ,Medicine ,lipids (amino acids, peptides, and proteins) ,Orthopedics and Sports Medicine ,business ,Genetic association - Abstract
Genetic polymorphisms within physiologically relevant KIF6 and APOE genes were examined in the context of athletic performance. KIF6 and ApoE are involved in cardiovascular health, modulation of li...
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- 2020
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10. Association of KIF6 Variant with Lipid Level and Angiographic Coronary Artery Disease Events Risk in the Han Chinese Population
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Ge Wu, Gui-Bin Li, and Bin Dai
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KIF6 ,rs20455 ,cardiovascular risk ,plasma lipoprotein level ,Han populations ,Organic chemistry ,QD241-441 - Abstract
KIF6 is a class of molecular motor from the kinesin superfamily. Recently, multiple large studies consisting mainly of Europeans have shown that KIF6 Trp719Arg SNP may be a new predictive factor for coronary artery disease (CAD) event risk. The allelic frequency distribution of rs20455 is different in various populations, yet studies among the Han population, one of the largest ethnic groups in the World, have not been conducted. This study is aimed to evaluate the association of KIF6 Trp719Arg variant with angiographic CAD and serum lipid levels in the Han population from northern China. In this case-controlled study, peripheral blood samples were collected from 356 patients and 568 controls of Han Chinese origin. Genotyping was performed by a high-resolution melting curve. The impact of rs20455 on CAD and non-fatal MI was evaluated in a dominant genetic model with stepwise multiple regression analysis. There were no significant differences of genotypes and allele frequency between angiographic CAD and control groups (p > 0.05); however, that of MI and non-MI subgroups were significant differences (p < 0.05). After adjusting for significant risk factors, angiographic CAD risk was not significantly increased in 719Arg allele carriers compared with non-carriers. Further analysis revealed that the non-fatal MI risk and triglyceride levels were significantly higher in 719Arg allele carriers than non-carriers. In conclusion, KIF6 719Arg allele was not an independent risk factor for angiographic CAD susceptibility in Han populations from northern China. However, it was associated with a significantly higher TG level, which may indicate an increased myocardial infarction risk in angiographic CAD patients.
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- 2012
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11. MassARRAY multigene screening combined with LDL-C and sdLDL-C detection for more favorable outcomes in type 2 diabetes mellitus therapy
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Junhong Wang, Yuanyuan Zhang, Xiaoyu Zhao, Cheng Xu, Yong Tian, Xiangguang Luo, Ziying Yao, Yanxiao Liu, and Xinjun Wang
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Apolipoprotein E ,Male ,lcsh:Internal medicine ,medicine.medical_specialty ,Statin ,lcsh:QH426-470 ,endocrine system diseases ,MassARRAY ,medicine.drug_class ,030204 cardiovascular system & hematology ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Pharmacotherapy ,Internal medicine ,Type 2 diabetes mellitus ,Genetics ,medicine ,Humans ,030212 general & internal medicine ,lcsh:RC31-1245 ,LDL-C ,CYP2C9 ,Genetics (clinical) ,Heterozygous mutation ,biology ,business.industry ,Liver-Specific Organic Anion Transporter 1 ,Type 2 Diabetes Mellitus ,nutritional and metabolic diseases ,Cholesterol, LDL ,Middle Aged ,Cardiovascular disease ,lcsh:Genetics ,Diabetes Mellitus, Type 2 ,KIF6 ,biology.protein ,lipids (amino acids, peptides, and proteins) ,SdLDL-C ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,SLCO1B1 ,business ,Research Article - Abstract
Background To determine the clinical value of multigene polymorphisms, LDL-C and sdLDL-C on T2DM therapy. Methods In total, 352 T2DM patients before and after treatment and 48 healthy individuals were enrolled in this study. LDL-C and sdLDL-C were detected in 352 T2DM patients and 48 healthy individuals by Quantimetrix Lipoprint System. The 11 gene polymorphisms—HTR3B (rs2276307, A > G), APOE (rs7412, c.526C > T), APOE (rs429358, c.388 T > C), CYP2C9*3 (rs1057910, c.1075A > C), KIF6 (rs20455, c.2155 T > C), HMGCR (rs17238540, T > G), HMGCR (rs17244841, A > T), ABCB1 (rs2032582, A > C/T), HTR7 (rs1935349, C > T), SLCO1B1 (rs4149056, c.521 T > C), and CETP (rs708272, G > A)—were screened in these 352 T2DM patients by the Agena Bioscience MassARRAY system before therapy. Results Genetic polymorphisms associated with T2DM and statin effects in pretreatment patients were detected, then results showed that all 11 genes had heterozygous mutation, and 7 genes had homozygous mutation in 352 T2DM patients, more specifically reflected that these gene polymorphisms were common in Chinese T2DM patients. LDL-C and sdLDL-C were detected before and after treatment, sdLDL mainly existed in T2DM patients, and T2DM patients had higher mean levels of sdLDL-C than healthy people. After pharmacotherapy, the coincidence rates of decreases in LDL-C and sdLDL-C levels were 88.35% (311/352) and 84.09% (296/352), consistent with patients in remission. Conclusions Gene polymorphisms related to pharmacotherapy were common in Chinese T2DM patients. And the expression of LDL-C and sdLDL-C was consistent with the T2DM disease course. Combined multigene screening before therapy and LDL-C and sdLDL-C detection before and after therapy could better assist T2DM treatment.
- Published
- 2021
12. Impact of KIF6 Polymorphism rs20455 on Coronary Heart Disease Risk and Effectiveness of Statin Therapy in 100 Patients from Southern Iran.
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Hamidizadeh, Leila, Baghdad Abadi, Reza Haji Hosseini, Babaee Baigi, Mohammad Ali, Dastsooz, Hassan, Nejhad, Ali Khazaei, and Fardaei, Majid
- Subjects
- *
STATINS (Cardiovascular agents) , *CHI-squared test , *CONFIDENCE intervals , *CORONARY disease , *FISHER exact test , *GENETIC polymorphisms , *POLYMERASE chain reaction , *QUESTIONNAIRES , *RESEARCH funding , *T-test (Statistics) , *LOGISTIC regression analysis , *TREATMENT effectiveness , *CASE-control method , *DATA analysis software , *DESCRIPTIVE statistics , *ODDS ratio , *GENETICS - Abstract
Background: The purpose of this study was to investigate the association between Trp719Arg (rs20455) and Coronary Heart Disease (CHD), and also Coronary Heart Disease reduction in individuals with this SNP during statin therapy in southern Iran. It has been shown that rs20455, which could affect the function of kinesin protein, is associated with Coronary Heart Disease and could be an effective factor for patients who take statin therapy. Methods: Patients and control individuals were genotyped for rs20455 Single Nucleotide Polymorphism (SNP) using ARMS PCR (Amplification Refractory Mutation System Polymerase Chain Reaction) and RFLP (Restriction Fragment Length Polymorphism) analysis. The effect of kinesin family member 6 (KIF6) on statin therapy was also examined among patients who had a history of one or two heart attacks. Results: It was found that rs20455 had a significant association with Coronary Heart Disease (Odds Ratio [OR] 3.17, 95% Confidence Interval [CI] 1.68 to 5.98). In addition, statin therapy was more effective in rs20455 carriers than non-carriers, with 80% of the carriers showed positive response to this treatment. Conclusions: Trp 719Arg have an effect on development of Coronary Heart Disease but it is very useful for statin therapy. Overall, individuals with this Single Nucleotide Polymorphism can take statin therapy to prevent the catastrophic consequences of Coronary Heart Disease. [ABSTRACT FROM AUTHOR]
- Published
- 2015
13. Association between KIF6 rs20455 polymorphism and the risk of coronary heart disease (CHD): a pooled analysis of 50 individual studies including 40,059 cases and 64,032 controls
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Hejian Song, Yan Li, and Zhen Chen
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0301 basic medicine ,medicine.medical_specialty ,Heterozygote ,Endocrinology, Diabetes and Metabolism ,Clinical Biochemistry ,Gene Expression ,Kinesins ,Subgroup analysis ,Coronary Disease ,030204 cardiovascular system & hematology ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Gene Frequency ,Risk Factors ,Internal medicine ,medicine ,Odds Ratio ,Humans ,Polymorphism ,Allele frequency ,lcsh:RC620-627 ,Alleles ,Models, Genetic ,business.industry ,Research ,Biochemistry (medical) ,Homozygote ,Case-control study ,Odds ratio ,Publication bias ,Confidence interval ,3. Good health ,Coronary heart disease ,Meta-analysis ,lcsh:Nutritional diseases. Deficiency diseases ,030104 developmental biology ,Case-Control Studies ,KIF6 rs20455 ,KIF6 ,business ,Publication Bias - Abstract
Background The KIF6 rs20455 polymorphism has been verified as an important genetic factor of coronary heart disease (CHD), but with controversial results. The aim of this study was to explore the association between KIF6 rs20455 polymorphism and susceptibility to CHD. Methods All eligible studies were identified by searching Medline (mainly PubMed), EMBASE, the Web of Science, Cochrane Collaboration Database, Chinese National Knowledge Infrastructure, Wanfang Database and China Biological Medicine up to October 5, 2016.Odds ratios (ORs) with 95% confidence interval (CI) were used to explore the association between KIF6 rs20455 polymorphism and CHD risk. Begg’s and Egger’s tests were used to examine the publication bias. Subgroup analysis and sensitivity analysis were performed to test the reliability and stability of the results. All the analyses were carried out by Stata 12.0 software. Results A total of 28 publications including 50 individual studies were analyzed in this present work. There are no significant association found between KIF6 rs20455 polymorphism and CHD risk (Homozygote model: OR = 1.007, 95% CI =0.952–1.066, P = 0.801; Heterozygote model: OR = 1.009, 95% CI = 0.968–1.052, P = 0.636; Dominant model: OR = 1.007, 95% CI = 0.966–1.048, P = 0.753; Recessive model: OR = 0.989, 95% CI = 0.943–1.037, P = 0.655; Allele comparison model: OR = 1.00, 95% CI = 0.971–1.030, P = 0.988). Furthermore, subgroup analyses were performed by ethnicity, source of control. Conclusions Our result suggests that KIF6 rs20455 polymorphism may not be associated with CHD susceptibility. However, additional very well-designed large-scale studies are warranted to confirm our results.
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- 2018
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14. Sensitive SNP Detection of KIF6 Gene by Quantum Dot-DNA Conjugate Probe-Based Assay.
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Li, Min, Wang, Na, Zang, Wenqiao, Ma, Yunyun, Mao, Hongju, and Zhao, Guoqiang
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QUANTUM dots , *DNA probes , *BIOCONJUGATES , *BIOLOGICAL assay , *FLUORESCENCE , *SINGLE nucleotide polymorphisms , *LIGAND exchange reactions , *GENE amplification - Abstract
In recent years, quantum dots (QDs) have been widely used in numerous biological processes and bio-analysis as novel fluorescence indicators. In the study, we developed a quantum dot-based bio-barcode amplification in combination with a Taq DNA ligase approach for the rapid detection of a polymorphism in kinesin-like protein 6 gene (KIF6), which significantly enhances the sensitivity. A ligand-exchange reaction was performed to prepare MPA-functionalized water-soluble QDs. The amine-modified oligonucleotides were coupled to QDs surface to form functional QDs-DNA conjugates. Meanwhile, the surface of gold nanoparticles (AuNPs) was modified with both the detection probe and bio-barcode oligonucleotides. Then, the amine-modified capture DNAs were immobilized onto the chip, followed by the addition of the modified AuNPs to the modified chip surface to form sandwiched hybridization. When the capture DNA and detection probe were perfectly matched to target DNA (KIF6), Taq DNA ligase in the solution would link the gap between the two strands, resulting in a covalent linkage. The preprepared QDs-DNA conjugation was subsequently added into the system to eventually form the fluorescence assembly. There was a good linear relationship between the target DNA (KIF6) concentration (1pM to 1fM) and ΔG of spot on chip. The ΔG of single base mismatch group was far less than that of completely complementary group. The method of QD-based bio-barcode amplification can provide a detection limit with low fM sensitivity for the detection of KIF6 DNA samples. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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15. KIF6 719Arg Allele is Associated with Statin Effects on Cholesterol Levels in Amnestic Mild Cognitive Impairment and Alzheimer's Disease Patients.
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Sabbagh, Marwan, Malek-Ahmadi, Michael, Levenson, Ian, and Sparks, D. Larry
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STATINS (Cardiovascular agents) , *ANTILIPEMIC agents , *APOLIPOPROTEIN E , *ANTICHOLESTEREMIC agents , *MILD cognitive impairment - Abstract
KIF6 719Arg allele carriers are thought to have a greater lipid lowering response from statin therapy than non-carriers. Given the continued interest in the relationship between cholesterol, statin use, amnestic mild cognitive impairment (aMCI), and Alzheimer's disease (AD), investigating the role of KIF6 719Arg carrier status in these relationships may be of importance. Data from 86 patients (36 aMCI, 50 AD) with an average age of 76.87 ± 8.22 years were used for this study. Total cholesterol (TC), low density lipoprotein (LDL), high density lipoprotein (HDL), and triglycerides were the outcome variables. 719Arg carriers taking statins had significantly lower TC (p < 0.001) and LDL (p < 0.001) levels than 719Arg carriers not taking statins. In addition, 719Arg carriers not taking statins had significantly higher TC (p = 0.004) and LDL (p < 0.001) than 719Arg non-carriers taking statins. Additional analyses indicated that ApoE ℇ4 carrier status and statin use interaction is also associated with lower TC (p = 0.04), but not LDL (p = 0.06). The interaction between 719Arg and ApoE ℇ4 carrier status on TC and LDL was not significant. This study is the first to demonstrate an association between lower cholesterol levels and statin use among KIF6 719Arg allele carriers with aMCI and AD. Accounting for 719Arg carrier status may be important in future studies investigating the link between cholesterol and AD and also for AD and aMCI clinical trials using statins as a treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2013
16. Statin Pharmacogenomics: Opportunities to Improve Patient Outcomes and Healthcare Costs with Genetic Testing.
- Author
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Canestaro, William J., Brooks, David G., Chaplin, Donald, Choudhry, Niteesh K., Lawler, Elizabeth, Martell, Lori, Brennan, Troyen, and Wassman, E. Robert
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STATINS (Cardiovascular agents) , *HYDROXYMETHYLGLUTARYL coenzyme A reductases , *PHARMACOGENOMICS , *HUMAN chromosome abnormality diagnosis , *HEALTH outcome assessment - Abstract
HMG-CoA reductase inhibitors, commonly known as statins, are some of the most widely prescribed medications worldwide and have been shown to be effective at lowering cholesterol in numerous long-term prospective trials, yet there are significant limitations to their use. First, patients receiving statin therapy have relatively low levels of medication adherence compared with other drug classes. Next, numerous statin formulations are available, each with its own unique safety and efficacy profile, and it may be unclear to prescribers which treatment is optimal for their patients. Finally, statins have class-wide side effects of myopathy and rhabdomyolysis that have resulted in a product recall and dosage limitations. Recent evidence suggests that two genomic markers, KIF6 and SLCO1B1, may inform the therapy choice of patients initiating statins. Given the prevalence of statin usage, their potential health advantages and their overall cost to the healthcare system, there could be significant clinical benefit from creating personalized treatment regimens. Ultimately, if this approach is effective it may encourage higher OPEN ACCESS adoption of generic statins when appropriate, promote adherence, lower rates of myopathy, and overall achieve higher value cardiovascular care. This paper will review the evidence for personalized prescribing of statins via KIF6 and SLCO1B1 and consider some of the implications for testing these markers as part of routine clinical care. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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17. The 719Arg Variant of KIF6 and Cardiovascular Outcomes in Statin-Treated, Stable Coronary Patients of the Treating to New Targets and Incremental Decrease in End Points Through Aggressive Lipid-Lowering Prospective Studies.
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Arsenault, Benoit J., Boekholdt, S. Matthijs, Hovingh, G. Kees, Hyde, Craig L., DeMicco, David A., Chatterjee, Aurobindo, Barter, Philip, Deedwania, Prakash, Waters, David D., LaRosa, John C., Pedersen, Terje R., and Kastelein, John J. P.
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STATINS (Cardiovascular agents) ,CORONARY disease ,DIAGNOSIS ,CORONARY arteries ,ALLELES ,PATIENTS ,DISEASES - Abstract
The article discusses a study to determine if patients with stable coronary artery disease carrying the KIF6 719Arg allele are at an increased risk of future events and whether they obtain more benefit from high-dose statin therapy.The occurrence of major cardiovascular events (MCVE) was chosen as primary outcome measure. It concludes that carriers of the KIF6 719 Arg allele were not at increased cardiovascular risk and have no consistent cardiovascular benefit from high-dose statin therapy. INSET: CLINICAL PERSPECTIVE.
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- 2012
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18. Lack of association between the Trp719Arg polymorphism in kinesin-like protein-6 and cardiovascular risk and efficacy of atorvastatin among subjects with diabetes on dialysis: The 4D study
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Hoffmann, Michael M., März, Winfried, Genser, Bernd, Drechsler, Christiane, and Wanner, Christoph
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CARDIOVASCULAR diseases risk factors , *GENETIC polymorphisms , *KINESIN , *HEMODIALYSIS , *DNA , *TYPE 2 diabetes , *ATORVASTATIN - Abstract
Abstract: Aims: We investigated whether KIF6 Trp719Arg genotypes affect cardiovascular outcomes and efficacy of statin therapy in patients with type 2 diabetes mellitus undergoing hemodialysis. Methods and results: We conducted a post hoc analysis of the 4D-study, a randomized trial including 1255 patients. Patients were randomly assigned to double-blind treatment with either 20mg of atorvastatin (n =619) or placebo (n =636) once daily and followed for 4 years (median). DNA was available for 1232 patients and we assessed KIF6 Trp719Arg genotypes by PCR and subsequent restriction digest. Carriers of the Arg719 allele showed no increased prevalence of cardiovascular disease. The incidence of cardiac death, MI, and stroke did not differ across KIF6 genotypes, irrespective of whether the patients were treated with atorvastatin or not. Conclusion: In patients with type 2 diabetes mellitus on hemodialysis, KIF6 Trp719Arg genotypes were not associated with adverse cardiovascular outcomes during follow-up or with the efficacy of atorvastatin therapy. [Copyright &y& Elsevier]
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- 2011
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19. No Impact of KIF6 Genotype on Vascular Risk and Statin Response Among 18,348 Randomized Patients in the Heart Protection Study
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Hopewell, Jemma C., Parish, Sarah, Clarke, Robert, Armitage, Jane, Bowman, Louise, Hager, Jorg, Lathrop, Mark, and Collins, Rory
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CARDIOVASCULAR diseases risk factors , *STATINS (Cardiovascular agents) , *GENETIC polymorphisms , *PLACEBOS , *MYOCARDIAL infarction , *LOW density lipoproteins , *PHARMACOGENOMICS , *CONFIDENCE intervals - Abstract
Objectives: The aim of this study was to test the effects of the KIF6 Trp719Arg polymorphism (rs20455) on vascular risk and response to statin therapy in 18,348 participants from the Heart Protection Study. Background: There have been claims that noncarriers of the KIF6 719Arg variant receive little benefit from statin therapy. Screening for this genetic variant is now being used to influence statin use. Methods: Participants received 40 mg simvastatin daily for 4 to 6 weeks before being randomly allocated 40 mg simvastatin daily or placebo for 5 years. Major coronary event was pre-defined as coronary death or nonfatal myocardial infarction, and major vascular event was pre-defined as major coronary event plus revascularization or stroke. Results: The KIF6 genotype was not significantly associated, among placebo-allocated participants, with the risks of incident major vascular events, major coronary events, revascularizations, or strokes. Overall, 40 mg simvastatin daily produced a 42% reduction in low-density lipoprotein cholesterol, which did not differ significantly by KIF6 719Arg carrier status (p = 0.51). Proportional reductions in the risk of major vascular events with statin therapy were similar (interaction p = 0.70) and highly significant across KIF6 genotypes: 23% (95% confidence interval: 16% to 29%; p = 5.3 × 10−10) in carriers (Arg/Arg or Trp/Arg), and 24% (95% confidence interval: 17% to 31%; p = 4.6 × 10−9) in noncarriers (Trp/Trp). A similar lack of interaction was observed for major coronary events, revascularizations, and strokes considered separately. Conclusions: Statin therapy significantly reduces the incidence of coronary and other major vascular events to a similar extent, irrespective of KIF6 genotype. Consequently, the use of KIF6 genotyping to guide statin therapy is not warranted. (Heart Protection Study; ISRCTN48489393) [ABSTRACT FROM AUTHOR]
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- 2011
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20. Lack of Association Between the Trp719Arg Polymorphism in Kinesin-Like Protein-6 and Coronary Artery Disease in 19 Case-Control Studies
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Assimes, Themistocles L., Hólm, Hilma, Kathiresan, Sekar, Reilly, Muredach P., Thorleifsson, Gudmar, Voight, Benjamin F., Erdmann, Jeanette, Willenborg, Christina, Vaidya, Dhananjay, Xie, Changchun, Patterson, Chris C., Morgan, Thomas M., Burnett, Mary Susan, Li, Mingyao, Hlatky, Mark A., Knowles, Joshua W., Thompson, John R., Absher, Devin, Iribarren, Carlos, and Go, Alan
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CORONARY disease , *GENETIC polymorphisms , *KINESIN , *MYOCARDIAL infarction , *REGRESSION analysis , *CASE-control method , *CONFIDENCE intervals , *GENETIC carriers , *GENETICS - Abstract
Objectives: We sought to replicate the association between the kinesin-like protein 6 (KIF6) Trp719Arg polymorphism (rs20455), and clinical coronary artery disease (CAD). Background: Recent prospective studies suggest that carriers of the 719Arg allele in KIF6 are at increased risk of clinical CAD compared with noncarriers. Methods: The KIF6 Trp719Arg polymorphism (rs20455) was genotyped in 19 case-control studies of nonfatal CAD either as part of a genome-wide association study or in a formal attempt to replicate the initial positive reports. Results: A total of 17,000 cases and 39,369 controls of European descent as well as a modest number of South Asians, African Americans, Hispanics, East Asians, and admixed cases and controls were successfully genotyped. None of the 19 studies demonstrated an increased risk of CAD in carriers of the 719Arg allele compared with noncarriers. Regression analyses and fixed-effects meta-analyses ruled out with high degree of confidence an increase of ≥2% in the risk of CAD among European 719Arg carriers. We also observed no increase in the risk of CAD among 719Arg carriers in the subset of Europeans with early-onset disease (younger than 50 years of age for men and younger than 60 years of age for women) compared with similarly aged controls as well as all non-European subgroups. Conclusions: The KIF6 Trp719Arg polymorphism was not associated with the risk of clinical CAD in this large replication study. [Copyright &y& Elsevier]
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- 2010
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21. Investigation of KIF6 Trp719Arg gene polymorphism in a case-control study of coronary artery disease and non-fatal myocardial infarction in the Eastern Province of Saudi Arabia
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Rudaynah A. Alali, Mohammed Almansori, Abdullah M. Alshehri, Chittibabu Vatte, Shahanas Chathoth, Fahad Al-Muhanna, Amein K. Al-Ali, Folkert W. Asselbergs, Cyril Cyrus, and Awatif N. Al-Nafaie
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0301 basic medicine ,Adult ,Male ,Pathology ,medicine.medical_specialty ,Heart disease ,Myocardial Infarction ,Saudi Arabia ,Kinesins ,lcsh:Medicine ,macromolecular substances ,Coronary Artery Disease ,030204 cardiovascular system & hematology ,Research Support ,Polymorphism, Single Nucleotide ,Coronary artery disease ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Journal Article ,Medicine ,Humans ,Genetic Predisposition to Disease ,Myocardial infarction ,cardiovascular diseases ,Allele ,Prospective cohort study ,Non-U.S. Gov't ,Alleles ,Aged ,business.industry ,Research Support, Non-U.S. Gov't ,lcsh:R ,Case-control study ,General Medicine ,Middle Aged ,medicine.disease ,030104 developmental biology ,Case-Control Studies ,Mutation ,KIF6 ,Female ,Gene polymorphism ,business - Abstract
BACKGROUND: Kinesin-like protein 6 (KIF6), a member of the kinesin superfamily, is involved in intracellular transport. A few prospective studies have shown the KIF6 variant Trp719Arg (rs20455) to be associated with coronary artery disease (CAD) in Caucasian populations. However, recent genome-wide association studies on CAD have not proven these associations. OBJECTIVES: Since the role of KIF6 719Arg allele in other ethnic populations is largely unknown, we sought to determine whether the KIF6 719Arg allele is associated with CAD in an ethnic population of Saudi Arabia. DESIGN: Case-control study. SETTING: CAD patients and control subjects from King Fahd Hospital of the University, Al-Khobar, Saudi Arabia. PATIENTS AND METHODS: The study population included angiographically defined CAD patients (n=1002) and controls (n=984) with a normal electrocardiogram. MAIN OUTCOME MEASURE(S): Association of KIF6 Trp719Arg mutation with CAD. RESULTS: The KIF6 Trp719Arg polymorphism was not associated with CAD (OR 0.976, 95% CI 0.861–1.105; P=.704). In addition, KIF6 Trp719Arg polymorphism showed a lack of association even in stratified myocardial infarction patients (n=802) (OR 1.006, 95% CI 0.881–1.148; P=.929) in comparison to controls. CONCLUSIONS: The absence of Trp719Arg polymorphism association with CAD and CAD in stratified myocardial infarction cases indicates that the polymorphism is not associated with an increased risk among CAD patients from the Eastern Province of Saudi Arabia. Further studies in different provinces are required to unravel biological mechanisms underlying CAD in patients from Saudi Arabia. LIMITATIONS: Unavailability of data on statin usage among the patient population.
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- 2016
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22. Impact of the 719Arg Variant of KIF6 and Major Cardiovascular Events on Patients who Received Statins: A Systematic Review and Meta-Analysis
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Guangyan Mu, Shuqing Chen, Xia Zhao, Zhuo Zhang, Yimin Cui, Shuang Zhou, Qian Xiang, and Qiufen Xie
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0301 basic medicine ,medicine.medical_specialty ,Kinesins ,Cochrane Library ,Arginine ,01 natural sciences ,03 medical and health sciences ,Risk Factors ,Internal medicine ,Drug Discovery ,medicine ,Humans ,cardiovascular diseases ,Pharmacology ,Polymorphism, Genetic ,business.industry ,Incidence (epidemiology) ,Genetic Variation ,Odds ratio ,Confidence interval ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,030104 developmental biology ,Cardiovascular Diseases ,Meta-analysis ,Relative risk ,KIF6 ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business ,Mace - Abstract
Purpose: The purpose of this study was to determine the relationship between Kinesin like protein 6 (KIF6) gene Trp719Arg and major cardiovascular events (MACEs) risk in subjects who received statin therapy. Methods: PubMed, EmBase, and the Cochrane Library were searched from inception through September 2017. The selected studies evaluated the association of Trp719Arg with MACEs in individuals who received statins. Relative risk (RR) and 95% confidence interval (CI) were used to evaluate the effect of statin therapy on MACEs in subjects carrying polymorphisms, and the odds ratio (OR) and 95% CI were used to evaluate the relationship between Trp719Arg and MACE risk in individuals who received statins, using the random-effects model. Results: Seven studies were included (N=48,885). Overall, we found that statin therapy significantly reduced the risk for MACEs in subjects carrying ArgArg (RR: 0.79; 95% CI: 0.69-0.90; P=0.001), ArgTrp (RR: 0.71; 95% CI: 0.60 -0.83; P Conclusions: Statin therapy significantly reduced the risk for MACEs in subjects carrier specific KIF6 gene Trp719Arg polymorphisms. Further, subjects carrying ArgTrp or ArgArg+ArgTrp had a greater incidence of MACEs as compared with TrpTrp when they received statins.
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- 2018
23. Relationship between Lipid Phenotypes, Overweight, Lipid Lowering Drug Response and KIF6 and HMG-CoA Genotypes in a Subset of the Brisighella Heart Study Population
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Martina Rosticci, Giulia Sammarini, Gloria Ravegnini, Patrizia Hrelia, Arrigo F G Cicero, Claudio Borghi, Sergio D'Addato, Nicola Consolini, Muriel Assunta Musti, Dauren Botbayev, Giorgio Cantelli-Forti, Sabrina Angelini, Elisabetta Rizzoli, Gianmichele Massimo, Angelini, Sabrina, Rosticci, Martina, Massimo, Gianmichele, Musti, Muriel, Ravegnini, Gloria, Consolini, Nicola, Sammarini, Giulia, Dâ addato, Sergio, Rizzoli, Elisabetta, Botbayev, Dauren, Borghi, Claudio, Cantelli-Forti, Giorgio, Cicero, Arrigo F., and Hrelia, Patrizia
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0301 basic medicine ,Male ,Kinesins ,030204 cardiovascular system & hematology ,Catalysi ,Body Mass Index ,lcsh:Chemistry ,chemistry.chemical_compound ,0302 clinical medicine ,High-density lipoprotein ,Medicine ,lcsh:QH301-705.5 ,Spectroscopy ,Aged, 80 and over ,biology ,hypercholesterolemia ,Computer Science Applications1707 Computer Vision and Pattern Recognition ,General Medicine ,Middle Aged ,Brisighella heart study ,waist circumference ,Lipids ,Computer Science Applications ,HMG-CoA ,KIF6 ,polymorphisms ,Phenotype ,HMG-CoA reductase ,Population study ,Female ,lipids (amino acids, peptides, and proteins) ,Adult ,medicine.medical_specialty ,Statin ,Genotype ,medicine.drug_class ,Catalysis ,Article ,Inorganic Chemistry ,03 medical and health sciences ,Young Adult ,Internal medicine ,Humans ,Genetic Predisposition to Disease ,Obesity ,Polymorphism ,Physical and Theoretical Chemistry ,Molecular Biology ,Aged ,Demography ,business.industry ,Cholesterol ,Organic Chemistry ,Overweight ,medicine.disease ,030104 developmental biology ,Endocrinology ,chemistry ,lcsh:Biology (General) ,lcsh:QD1-999 ,Genetic Loci ,biology.protein ,Acyl Coenzyme A ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business ,Body mass index - Abstract
The existence of genetic traits might explain the susceptibility to develop hypercholesterolemia and the inter-individual differences in statin response. This study was performed to evaluate whether individuals’ polymorphisms in HMG-CoA and KIF6 genes are independently associated with hypercholesterolemia, other lipid-associated traits, and statin response in unselected individuals enrolled in the Brisighella heart study (Survey 2012). A total of 1622 individuals, of which 183 under statin medication, were genotyped for a total of five polymorphisms (KIF6 rs20455, rs9471077, rs9462535; HMG-CoA rs3761740, rs3846662). The relationships between the five loci and clinical characteristics were analyzed. The principal basic parameters calculated on 12 h fasting blood included total cholesterol (TC), High Density Lipoprotein Cholesterol (HDL-C), Low-Density Lipoprotein Cholesterol (LDL-C), and triglycerides (TG). Hypercholesterolemia was defined as a TC >200 mg/dL or use of lipid-lowering medication. 965 individuals were characterized by hypercholesterolemia; these subjects were significantly older (p < 0.001), with body mass index (BMI) and waist circumference significantly higher (p < 0.001) compared to the others. HMG-CoA rs3846662 GG genotype was significantly over-represented in the hypercholesterolemic group (p = 0.030). HMG-CoA rs3846662 genotype was associated with the level of TC and LDL-C. Furthermore, in the same subset of untreated subjects, we observed a significant correlation between the KIF6 rs20455 and HDL-C. KIF6 variants were associated with a significantly lower (rs20455) or higher (rs9471077 and rs9462535) risk of obesity, in males only. No association between responsiveness to statins and the polymorphisms under investigation were observed. Our results showed associations between HMG-CoA rs3846662 and KIF6 rs20455 and lipid phenotypes, which may have an influence on dyslipidemia-related events. Moreover, this represents the first study implicating KIF6 variants with obesity in men, and point to the possible involvement of this genetic locus in the known gender-related differences in coronary artery disease.
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- 2017
24. Final amendment: A plausible explanation for in silico reporting of erroneous MET gene expression in tumor-educated platelets (TEP) intended for 'liquid biopsy' of non-small cell lung carcinoma still refutes the TEP-study
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Sandeep Chakraborty
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Genetics ,Chromosome 7 (human) ,Exon ,In silico ,KIF6 ,Cancer research ,Carcinoma ,medicine ,Biology ,Liquid biopsy ,medicine.disease ,Lung cancer ,Gene - Abstract
Final amendment noteThis paper had proposed a plausible way for detecting large quantities of MET, which the authors have clarified was not done :the possible explanation proposed for this erroneous MET gene expression does bypass the filtering step we perform in the data processing pipeline, i.e. selection of intron-spanning reads, as can be read in the main text” comments in http://www.biorxiv.org/content/early/2017/07/02/146134, where a continuing critique of the TEP study continues. Please consider this pre-print closed.Original abstractThe reported over-expression of MET genes in non-small cell lung carcinoma (NSCLC) from an analysis of the RNA-seq data from tumor-educated platelets (TEP), intended to supplement existing ‘liquid biopsy’ techniques [1], has been refuted recently (http://biorxiv.org/content/early/2017/06/05/146134, not peer-reviewed). The MET proto-oncogene (Accid:NG 008996.1, RefSeqGene LRG 662 on chromosome 7, METwithintrons) encodes 21 exons resulting in a 6710 bps MET gene (Accid: NM 001127500.2, METonlyexons). METwithintrons has multiple matches in the RNA-seq derived reads of lung cancer samples (for example: SRR1982756.11853382). Unfortunately, these are non-specific sequences in the intronic regions, matching to multiple genes on different chromosomes with 100% identity (KIF6 on chr6, COL6A6 on chr3, MYO16 on chr13, etc. for SRR1982756.11853382). In contrast, METonlyexons has few matches in the reads, if at all [2]. However, even RNA-seq from healthy donors have similar matches for METwithintrons so the computation behind the over-expression statistic remains obscure, even if METwithintrons was used as the search gene. In summary, this work re-iterates the lack of reproducibility in the bioinformatic analysis that establishes TEP as a possible source for “liquid biopsy”.
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- 2017
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25. The KIF6 Collapse ⁎ [⁎] Editorials published in the Journal of the American College of Cardiology reflect the views of the authors and do not necessarily represent the views of JACC or the American College of Cardiology.
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Topol, Eric J. and Damani, Samir B.
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- 2010
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26. The polymorphism Trp719Arg in the kinesin-like protein 6 is associated with the presence of late outgrowth endothelial progenitor cells in acute myocardial infarction
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Davani, Siamak, Gozalo, Claire, Gambert, Ségolène, Chalmers, David, Gambert, Philippe, Schiele, François, Kantelip, Jean-Pierre, and Meneveau, Nicolas
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- 2010
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27. Providing patients with pharmacogenetic test results affects adherence to statin therapy: results of the Additional KIF6 Risk Offers Better Adherence to Statins (AKROBATS) trial
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Charland, S L, Agatep, B C, Herrera, V, Schrader, B, Frueh, F W, Ryvkin, M, Shabbeer, J, Devlin, J J, Superko, H R, and Stanek, E J
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- 2014
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28. KIF6 719Arg Carrier Status Association with Homocysteine and C-Reactive Protein in Amnestic Mild Cognitive Impairment and Alzheimer’s Disease Patients
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Marwan N. Sabbagh, Amar Patel, and Michael Malek-Ahmadi
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Apolipoprotein E ,Aging ,Pathology ,medicine.medical_specialty ,Article Subject ,Homocysteine ,Cognitive Neuroscience ,Disease ,lcsh:Geriatrics ,030204 cardiovascular system & hematology ,Logistic regression ,Gastroenterology ,lcsh:RC321-571 ,03 medical and health sciences ,Behavioral Neuroscience ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,Medicine ,Cognitive impairment ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,biology ,business.industry ,Cholesterol ,C-reactive protein ,lcsh:RC952-954.6 ,Neurology ,chemistry ,Clinical Study ,biology.protein ,KIF6 ,Neurology (clinical) ,business ,030217 neurology & neurosurgery - Abstract
Recent research has demonstrated associations between statin use, KIF6 719Arg carrier status, and cholesterol levels and amnestic mild cognitive impairment (aMCI) and Alzheimer’s disease (AD) patients. The association between 719Arg carrier status with homocysteine (tHcy) and c-reactive protein (CRP) levels in aMCI and AD has not been previously investigated. Data from 175 aMCI and AD patients were used for the analysis. 719Arg carriers had significantly lower levels of tHcy than noncarriers (P=0.02). No significant difference in CRP levels between 719Arg carriers and noncarriers was present (P=0.37). Logistic regression yielded no significant effect for 719Arg status on CRP [OR = 1.79 (0.85, 3.83),P=0.13] but did demonstrate a significant effect for tHcy [OR = 0.44 (0.23, 0.83),P=0.01] after adjusting for ApoEε4carrier status, age, gender, and statin use. This study is the first to explore the relationship between KIF6 719Arg carrier status with tHcy and CRP levels. 719Arg carriers were more likely to have normal tHcy levels after adjusting for ApoEε4status, age, gender, and statin use. These results suggest that the KIF6 gene might influence cardiovascular pathways associated with AD.
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- 2013
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29. Statin Pharmacogenomics: Opportunities to Improve Patient Outcomes and Healthcare Costs with Genetic Testing
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Donald Chaplin, Troyen A. Brennan, Lori A. Martell, E. Robert Wassman, Elizabeth Lawler, Niteesh K. Choudhry, David G. Brooks, and William J. Canestaro
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Drug ,medicine.medical_specialty ,Statin ,medicine.drug_class ,media_common.quotation_subject ,MEDLINE ,Alternative medicine ,statins ,adherence ,myopathy ,KIF6 ,SLCO1B1 ,lcsh:Medicine ,Medicine (miscellaneous) ,Pharmacology ,Article ,Health care ,Medicine ,Intensive care medicine ,media_common ,Genetic testing ,medicine.diagnostic_test ,business.industry ,lcsh:R ,Pharmacogenomics ,business - Abstract
HMG-CoA reductase inhibitors, commonly known as statins, are some of the most widely prescribed medications worldwide and have been shown to be effective at lowering cholesterol in numerous long-term prospective trials, yet there are significant limitations to their use. First, patients receiving statin therapy have relatively low levels of medication adherence compared with other drug classes. Next, numerous statin formulations are available, each with its own unique safety and efficacy profile, and it may be unclear to prescribers which treatment is optimal for their patients. Finally, statins have class-wide side effects of myopathy and rhabdomyolysis that have resulted in a product recall and dosage limitations. Recent evidence suggests that two genomic markers, KIF6 and SLCO1B1, may inform the therapy choice of patients initiating statins. Given the prevalence of statin usage, their potential health advantages and their overall cost to the healthcare system, there could be significant clinical benefit from creating personalized treatment regimens. Ultimately, if this approach is effective it may encourage higher adoption of generic statins when appropriate, promote adherence, lower rates of myopathy, and overall achieve higher value cardiovascular care. This paper will review the evidence for personalized prescribing of statins via KIF6 and SLCO1B1 and consider some of the implications for testing these markers as part of routine clinical care.
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- 2012
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30. Association of KIF6 Variant with Lipid Level and Angiographic Coronary Artery Disease Events Risk in the Han Chinese Population
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Gui-Bin Li, Bin Dai, and Ge Wu
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Male ,Kinesins ,Pharmaceutical Science ,Coronary Artery Disease ,030204 cardiovascular system & hematology ,Analytical Chemistry ,Coronary artery disease ,0302 clinical medicine ,Gene Frequency ,Risk Factors ,plasma lipoprotein level ,Drug Discovery ,Medicine ,Myocardial infarction ,Han populations ,rs20455 ,Genetics ,0303 health sciences ,Middle Aged ,Lipids ,3. Good health ,Chemistry (miscellaneous) ,Cardiology ,Molecular Medicine ,Female ,cardiovascular risk ,China ,medicine.medical_specialty ,Genotype ,Lipoproteins ,Polymorphism, Single Nucleotide ,Article ,lcsh:QD241-441 ,03 medical and health sciences ,lcsh:Organic chemistry ,Internal medicine ,Genetic model ,Humans ,Physical and Theoretical Chemistry ,Risk factor ,Allele ,Genotyping ,Allele frequency ,030304 developmental biology ,KIF6 ,business.industry ,Organic Chemistry ,Genetic Variation ,medicine.disease ,business - Abstract
KIF6 is a class of molecular motor from the kinesin superfamily. Recently, multiple large studies consisting mainly of Europeans have shown that KIF6 Trp719Arg SNP may be a new predictive factor for coronary artery disease (CAD) event risk. The allelic frequency distribution of rs20455 is different in various populations, yet studies among the Han population, one of the largest ethnic groups in the World, have not been conducted. This study is aimed to evaluate the association of KIF6 Trp719Arg variant with angiographic CAD and serum lipid levels in the Han population from northern China. In this case-controlled study, peripheral blood samples were collected from 356 patients and 568 controls of Han Chinese origin. Genotyping was performed by a high-resolution melting curve. The impact of rs20455 on CAD and non-fatal MI was evaluated in a dominant genetic model with stepwise multiple regression analysis. There were no significant differences of genotypes and allele frequency between angiographic CAD and control groups (p > 0.05), however, that of MI and non-MI subgroups were significant differences (p 0.05). After adjusting for significant risk factors, angiographic CAD risk was not significantly increased in 719Arg allele carriers compared with non-carriers. Further analysis revealed that the non-fatal MI risk and triglyceride levels were significantly higher in 719Arg allele carriers than non-carriers. In conclusion, KIF6 719Arg allele was not an independent risk factor for angiographic CAD susceptibility in Han populations from northern China. However, it was associated with a significantly higher TG level, which may indicate an increased myocardial infarction risk in angiographic CAD patients.
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- 2012
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31. Gene variants at FTO, 9p21, and 2q36.3 are age-independently associated with myocardial infarction in Czech men
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Věra Adámková, Dana Dlouha, Aleš Linhart, Marie Gebauerová, Michal Vrablík, Jaroslav A. Hubacek, Richard Ceska, Libor Vítek, Gabriela Dostálová, V. Stanek, and Jan Pitha
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0301 basic medicine ,Male ,medicine.medical_specialty ,Aging ,Genotype ,Clinical Biochemistry ,Population ,Myocardial Infarction ,030204 cardiovascular system & hematology ,Biochemistry ,Gastroenterology ,Polymorphism, Single Nucleotide ,Body Mass Index ,03 medical and health sciences ,0302 clinical medicine ,Polymorphism (computer science) ,Risk Factors ,Internal medicine ,Genetic variation ,medicine ,Humans ,Myocardial infarction ,education ,Czech Republic ,education.field_of_study ,business.industry ,Biochemistry (medical) ,Age Factors ,Genetic Variation ,General Medicine ,Middle Aged ,medicine.disease ,Genotype frequency ,030104 developmental biology ,Endocrinology ,Chromosomes, Human, Pair 2 ,KIF6 ,business ,Chromosomes, Human, Pair 9 ,Body mass index - Abstract
Cardiovascular disease (CVD) is a major cause of morbidity and mortality in developed countries. This study aimed to confirm the effect of common putative CVD-associated gene variants (FTO rs17817449, KIF6 rs20455, 9p21 rs10757274 and 2q36.3 rs2943634) on CVD manifestation, and determine whether this effect differs between younger (50 years) and older CVD patients.1191 controls and 1889 MI patients were analyzed. All participants were Caucasian Czech males aged65 years (532 were50 years) who were examined at cardiology clinics in Prague, Czech Republic. Variants of FTO, 9p21, 2q36.3, and KIF-6 were genotyped using PCR-RFLP or TaqMan assay.Variants of FTO (OR 1.48; 95% CI, 1.19-1.84 in a TT vs. GG comparison, p=0.0005); 9p21 (OR 1.74; 95% CI, 1.41-2.14 in an AA vs. GG comparison, p=0.0001); and 2q36.3 (OR 1.34; 95%CI, 1.09-1.65 in an AA vs. +C comparison, p=0.006) were significantly associated with MI in the male Czech population. In contrast, genotype frequencies of KIF-6 (rs20455) were the same in patients and controls (P=1.00). Nearly identical results were observed when a subset of young MI patients (N=532, aged50 years) was analyzed.We confirmed the importance of determining FTO, 9p21, and 2q36.3 variants as part of the genetic determination of MI risk in the Czech male population.
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- 2015
32. Kinesin-Like Protein 6 (KIF6) Polymorphism and the Efficacy of Rosuvastatin in Primary Prevention
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Jean G. MacFadyen, Daniel I. Chasman, Paul M. Ridker, and Robert J. Glynn
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medicine.medical_specialty ,Statin ,business.industry ,medicine.drug_class ,Hazard ratio ,Confidence interval ,Rosuvastatin Calcium ,Endocrinology ,Internal medicine ,JUPITER trial ,Genetics ,medicine ,Clinical endpoint ,KIF6 ,Rosuvastatin ,Cardiology and Cardiovascular Medicine ,business ,Genetics (clinical) ,medicine.drug - Abstract
Background— Hypothesis-generating data raise the possibility that carriers of the kinesin-like protein 6 ( KIF6 ) 719 arginine (Arg) allele preferentially benefit from statin therapy, and, on this basis, a commercial assay for KIF6 has been developed. Methods and Results— In the recently completed JUPITER trial, men and women without prior cardiovascular disease or diabetes who had baseline low-density lipoprotein cholesterol KIF6 719Arg allele on outcomes in this primary prevention trial, both among Caucasian participants and in the trial as a whole. Among 8781 Caucasian trial participants, we observed no increase in vascular event rates among carriers of the KIF6 719Arg allele as compared with noncarriers (hazard ratio, 0.91; 95% confidence interval, 0.66 to 1.26) nor any difference in percent low-density lipoprotein cholesterol reduction with rosuvastatin according to genotype (−52 versus −52 mg/dL, P =0.11). Rosuvastatin allocation was associated with an almost identical reduction in the trial primary end point among carriers (hazard ratio, 0.61; 95% confidence interval, 0.43 to 0.87) as among noncarriers (hazard ratio, 0.59; 95% confidence interval, 0.39 to 0.88) ( P -interaction=0.90). Genotype had no impact on rosuvastatin efficacy in further analyses that included all-cause mortality, in analyses conducted in the total trial cohort that adjusted for race, or in analyses using generalized models of inheritance rather than recessive models. Conclusions— In the large primary prevention JUPITER trial, rosuvastatin was equally effective at reducing cardiovascular event rates among carriers and noncarriers of the KIF6 719Arg allele. Thus, at least for rosuvastatin, there appears to be no clinical utility to screening for KIF6 genotype as a method to determine vascular risk or to predict statin efficacy. Clinical Trial Registration— URL: http://www.clinicaltrials.gov . Unique identifier: NCT00239681.
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- 2011
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33. A Kinesin Family Member 6 Variant Is Associated With Coronary Heart Disease in the Women’s Health Study
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Robert Y. L. Zee, James J. Devlin, Paul M. Ridker, Daniel I. Chasman, Judy Z. Louie, Olga Iakoubova, and Dov Shiffman
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medicine.medical_specialty ,Statin ,Proportional hazards model ,medicine.drug_class ,business.industry ,Hazard ratio ,Single-nucleotide polymorphism ,medicine.disease ,Surgery ,Internal medicine ,Cohort ,medicine ,KIF6 ,Myocardial infarction ,Prospective cohort study ,business ,Cardiology and Cardiovascular Medicine - Abstract
Objectives We asked if carriers of the 719Arg allele of kinesin family member 6 (KIF6) have increased risk of coronary heart disease (CHD) in a cohort of initially healthy Caucasian American women. Background The 719Arg allele of KIF6 (rs20455) has been reported to be associated with increased risk of CHD in a large population-based prospective study, ARIC (Atherosclerosis Risk in Communities), and in the placebo arms of 2 statin trials, CARE (Cholesterol and Recurrent Events) and WOSCOPS (West of Scotland Coronary Prevention Study). However, this KIF6 variant was not specifically investigated in the female subgroup in the ARIC study, and the CARE and WOSCOPS trials included only a small number of female patients. Methods Genotypes of the rs20455 single nucleotide polymorphism (SNP) were determined among 25,283 initially healthy Caucasian women, age 45 years and older, participating in the WHS (Women’s Health Study) who were prospectively followed over a 12-year period for incident cardiovascular events. The risk associated with the 719Arg allele of KIF6 was estimated using Cox proportional hazards models that adjusted for age and traditional risk factors. Results During follow-up, 953 women suffered a first-ever CHD event (myocardial infarction, coronary revascularization, or cardiovascular death) or first-ever ischemic stroke. Compared with noncarriers, carriers of the 719Arg allele had an increased risk of CHD (hazard ratio [HR] = 1.24 [95% confidence interval (CI) 1.04 to 1.46, p = 0.013]) and myocardial infarction (HR = 1.34 [95% CI 1.02 to 1.75, p = 0.034]) but not ischemic stroke. Conclusions Confirming and extending previous reports, carriers of the 719Arg allele of KIF6 have 34% higher risk of myocardial infarction and 24% higher risk of CHD compared with noncarriers among 25,283 women from the WHS.
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- 2008
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34. Polymorphism in KIF6 Gene and Benefit From Statins After Acute Coronary Syndromes
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Todd G. Kirchgessner, Carmen H. Tong, Olga Iakoubova, Marc S. Sabatine, James J. Devlin, Joseph J. Catanese, Christopher P. Cannon, Katy L. Simonsen, Charles M. Rowland, Eugene Braunwald, and Koustubh Ranade
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medicine.medical_specialty ,Acute coronary syndrome ,business.industry ,Atorvastatin ,Prove it ,medicine.disease ,Surgery ,Atorvastatin calcium ,Internal medicine ,medicine ,KIF6 ,Cardiology ,business ,Cardiology and Cardiovascular Medicine ,Gene ,TIMI ,Pravastatin ,medicine.drug - Abstract
Polymorphism in KIF6 Gene and Benefit From Statins After Acute Coronary Syndromes: Results from the PROVE IT-TIMI 22 StudyOlga A. Iakoubova, Marc S. Sabatine, Charles M. Rowland, Carmen H. Tong, Jo...
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- 2008
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35. Association of the Trp719Arg Polymorphism in Kinesin-Like Protein 6 With Myocardial Infarction and Coronary Heart Disease in 2 Prospective Trials
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Carmen H. Tong, Marc A. Pfeffer, Olga Iakoubova, James Shepherd, Frank M. Sacks, Charles M. Rowland, Chris J. Packard, Thomas J. White, Hannia Campos, Dov Shiffman, James J. Devlin, Todd G. Kirchgessner, Eugene Braunwald, Marc S. Sabatine, Bradford A. Young, and Andre R. Arellano
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medicine.medical_specialty ,business.industry ,Proportional hazards model ,Hazard ratio ,Absolute risk reduction ,Odds ratio ,medicine.disease ,Surgery ,Internal medicine ,Cohort ,medicine ,KIF6 ,Myocardial infarction ,Cardiology and Cardiovascular Medicine ,business ,Pravastatin ,medicine.drug - Abstract
Objectives We asked whether 35 genetic polymorphisms, previously found to be associated with cardiovascular disease, were associated with myocardial infarction (MI) in the CARE (Cholesterol and Recurrent Events) trial and with coronary heart disease (CHD) in the WOSCOPS (West of Scotland Coronary Prevention Study) trial and whether the risk associated with these polymorphisms could be reduced by pravastatin treatment. Background Identification of genetic polymorphisms associated with CHD may improve assessment of CHD risk and understanding of disease pathophysiology. Methods We tested the association between genotype and recurrent MI in the CARE study and between genotype and primary CHD in the WOSCOPS trial using regression models that adjusted for conventional risk factors: Cox proportional hazards models for the CARE study and conditional logistic regression models for a nested case-control study of the WOSCOPS trial. Results We found that Trp719Arg (rs20455) in KIF6 was associated with coronary events. KIF6 encodes kinesin-like protein 6, a member of the molecular motor superfamily. In placebo-treated patients, carriers of the KIF6 719Arg allele (59.4% of the CARE trial cohort) had a hazard ratio of 1.50 (95% confidence interval [CI] 1.05 to 2.15) in the CARE trial and an odds ratio of 1.55 (95% CI 1.14 to 2.09) in the WOSCOPS trial. Among carriers, the absolute risk reduction by pravastatin was 4.89% (95% CI 1.81% to 7.97%) in the CARE trial and 5.49% (95% CI 3.52% to 7.46%) in the WOSCOPS trial. Conclusions In both the CARE and the WOSCOPS trials, carriers of the KIF6 719Arg allele had an increased risk of coronary events, and pravastatin treatment substantially reduced that risk.
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- 2008
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36. The Trp719Arg polymorphism of the KIF6 gene and coronary heart disease risk: systematic review and meta-analysis
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David Ruiz-Ramos, María Lilia López-Narváez, Thelma Beatriz González-Castro, Manuel Eduardo Torres-Hernández, Isela Esther Juárez-Rojop, Manuel Alfonso Baños-González, Yazmín Hernández-Díaz, and Carlos Alfonso Tovilla-Zárate
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Candidate gene ,Population ,Myocardial Infarction ,Kinesins ,Coronary Disease ,Biology ,Bioinformatics ,White People ,Risk Factors ,Genetic model ,Genetics ,medicine ,Humans ,Myocardial infarction ,Allele ,education ,Alleles ,Genetic association ,education.field_of_study ,Polymorphism, Genetic ,KIF6 ,Trp719Arg polymorphism ,Research ,General Medicine ,Cardiovascular disease ,medicine.disease ,Meta-analysis ,Systematic review - Abstract
Background Genetic factors play an important role in the pathogenesis of coronary heart disease (CHD). Kinesin-like protein 6 (KIF6) is a new candidate gene for CHD, since it has been identified as a potential risk factor. The aim of this study was to perform a systematic review and meta-analysis of previously published association studies between the Trp719Arg polymorphism of KIF6 and the development of CHD. Methods Studies and abstracts investigating the relationship between the Trp719Arg polymorphism of KIF6 and subsequent risk for development of CHD were reviewed. Electronic search from Pubmed and EBSCO databases was performed between 1993 and 2014 to identify studies that fulfilled the inclusion criteria. To analyze the association we used the models: allelic, additive, dominant and recessive. Moreover, we conducted a sub-analysis by populations using the same four models. Results Twenty-three studies were included in the meta-analysis. The Trp719Arg polymorphism showed a significant association with CHD when the analysis comprised the population with myocardial infarction (MI) and the additive genetic model was used. Moreover, this polymorphism showed a protective association with CHD when the analysis comprised the whole population using the recessive genetic model. Conclusions Our findings indicate that the Trp719Arg polymorphism of the KIF6 gene is an important risk factor for developing MI and that allele 719Arg may have a protective association to present CHD in all populations. PROSPERO registration CRD42015024602. Electronic supplementary material The online version of this article (doi:10.1186/s41065-015-0004-7) contains supplementary material, which is available to authorized users.
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- 2015
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37. Genotyping and meta-analysis of KIF6 Trp719Arg polymorphism in South Indian Coronary Artery Disease patients: A case-control study
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Durairajpandian Vishnuprabu, Subramanian Geetha, Arasambattu Kannan Munirajan, Nitish R. Mahapatra, and Lakkakula V.K.S. Bhaskar
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systolic blood pressure ,genotype ,polymerase chain reaction ,Coronary Artery Disease ,Bioinformatics ,single nucleotide polymorphism ,Polymorphism (computer science) ,TaqMan genotyping ,middle aged ,Genotype ,heart rate ,Medicine ,angiography ,restriction fragment length polymorphism ,Genetics (clinical) ,South Indian population ,rs20455 ,education.field_of_study ,kif6 gene ,adult ,Indian ,female ,genotyping technique ,priority journal ,risk factor ,medicine.medical_specialty ,hypertension ,alcohol consumption ,heart infarction ,Population ,DNA sequence ,SNP ,gene frequency ,smoking ,Article ,male ,Internal medicine ,Genetics ,controlled study ,human ,gene ,education ,Genotyping ,KIF6 ,business.industry ,diastolic blood pressure ,Case-control study ,Odds ratio ,case control study ,DNA isolation ,major clinical study ,Genotype frequency ,Myocardial infarction ,age ,business ,meta analysis - Abstract
The KIF6 719Arg allele is an interesting genomic variant widely screened in various populations and is reported to be associated with the risk of Coronary Artery Disease (CAD) and statin treatment outcome. Recent population based clinical studies and large-scale meta-analyses pondered over the role of 719Arg variant in CAD risk and treatment response. We screened the KIF6 Trp719Arg polymorphism (rs20455) in south Indian CAD patients in a case–control approach. A total of 1042 samples (510 CAD patients and 532 controls) were screened for the KIF6 Trp719Arg SNP by TaqMan SNP genotyping assay, followed by meta-analysis of the genotype data of non-Europeans reports. The 719Arg risk genotype (GG) was observed in 29.6% of CAD cases and in 30.1% of controls with an odds ratio (OR) of 1.07 (95% CI: 0.76–1.50), p value = 0.709. No significant difference in the genotype frequency was observed between CAD and controls in both dominant model (AG + GG vs AA) and allelic model (719Arg vs 719Trp) with an OR of 1.11 (p = 0.491) and 1.03 (p = 0.767), respectively. The covariate analysis indicated that smoking & alcohol consumption increased the risk for MI among CAD patients. Meta-analysis showed that the KIF6 719Arg allele is not associated with CAD risk in both fixed effect (p = 0.515, OR = 1.023, 95% CI = 0.956–1.094) and random effect (p = 0.547, OR = 1.022, 95% CI = 0.953–1.096). The symmetrical shape of the Egger's funnel plots revealed that there is no publication bias. These results suggest that there is no association of KIF6 719Arg allele with CAD risk in South Indian population and the meta-analysis confirms the same among non-European population., Highlights • First study to screen for KIF6Trp719Arg SNP in south Indian population • KIF6Arg variant is not a risk factor for south Indian CAD patients. • Meta-analysis showed no association of KIF6Arg allele in non-European CAD populations. • Smoking and alcoholic status were strong risk factors for MI; whereas KIF6 status is not.
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- 2015
38. 1A.11: ASSOCIATION OF KIF6 AND HMGCR LOCI WITH CARDIOMETABOLIC PHENOTYPES AND RESPONSE TO STATIN THERAPY IN THE BRISIGHELLA COHORT
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Elisabetta Rizzoli, Martina Rosticci, Chiara Scapoli, Inga Prokopenko, Arrigo Fg Cicero, Claudio Borghi, Gianmichele Massimo, Sabrina Angelini, Marina Giovannini, Reedik Mägi, Natalia Pervjakova, Krista Fischer, Letizia Marullo, Sergio D'Addato, Rosticci, M, Marullo, L, Cicero, A F G, Magi, R, Fischer, K, Pervjakova, N, D'Addato, S, Rizzoli, E, Massimo, G, Giovannini, M, Angelini, S, Scapoli, C, Prokopenko, I, and Borghi, C
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Oncology ,Genetics ,medicine.medical_specialty ,Physiology ,business.industry ,cardiovascular ,statin ,Disease ,Phenotype ,NO ,HMGcr loci ,Chronic disease ,Internal medicine ,Cohort ,Internal Medicine ,medicine ,KIF6 ,lipids (amino acids, peptides, and proteins) ,cardiovascular diseases ,Statin therapy ,KIF6 gene ,Cardiology and Cardiovascular Medicine ,business - Abstract
OBJECTIVE:Cardiovascular disease (CVD) represents the most common and lethal chronic disease worldwide. Lipids levels are the strongest risk factors for CVD and this is demonstrated by the fact that lipid-lowering statin therapy is largely used to prevent CVD. The role of the KIF6 gene in response to the statin therapy is controversial, and the biological mechanism through which it may act is still unknown.We investigated the role of KIF6 locus variants alone and their interaction with the well-established lipid locus at HMGCR in the variability of metabolic traits and in response to statin therapy in an Italian sample. DESIGN AND METHOD:We genotyped two intronic rs20455, rs9462535 and a coding rs9471077 within the KIF6 gene, as well as two non-coding rs3761740 and rs3846662 at HMGCR. We tested the association of these SNPs with 19 cardiometabolic phenotypes and lipid-lowering therapy response in a sample of 1645 individuals from the Brisighella cohort (BC). RESULTS: Established rs3846662 (Willer et al, Nat Gen 2013) at HMGCR is associated (P = 8.5x10-4) with LDL cholesterol (LDL-C) in BC. We did not find any significant association of KIF6 variants with response to statin therapy. We observe a locus-wide significant association at KIF6 between rs9471077 and APOB levels and rs20455 and HDL-C (P less than 0.001). rs3761740 at HMGCR showed an effect on systolic and diastolic blood pressure (SBP/DBP, P less than 0.007), which however wasn't significant after multiple testing correction. CONCLUSIONS: This is the first genetic study reported for Brisighella cohort, which confirms association with LDL-C at HMGCR locus. We noticed an effect of KIF6 variants on APOB and HDL-C, while we don't observe any effect on statin therapy. The study sample is relatively small to discover a common variant effect and might still be due to chance; therefore, we are seeking for replication in additional cohorts. These findings, if confirmed, might contribute to development of approaches for stratified patient care.
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- 2015
39. Association of USF1 and APOA5 polymorphisms with Familial Combined Hyperlipidemia in an Italian population
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Marco Gentile, Maria Nicoletta D'Agostino, Antonietta D'Angelo, Maria Donata Di Taranto, Gennaro Marotta, Paolo Rubba, Antonino Staiano, Elena Bloise, Giuliana Fortunato, Alberto Morgante, DI TARANTO, MARIA DONATA, Staiano, A, D'Agostino, MARIA NICOLETTA, D'Angelo, A, Bloise, E, Morgante, A, Marotta, Gennaro, Gentile, M, Rubba, PAOLO OSVALDO FEDERICO, and Fortunato, Giuliana
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Apolipoprotein E ,Adult ,Male ,medicine.medical_specialty ,Apolipoprotein B ,Familial combined hyperlipidemia ,Upstream stimulatory factor 1 (USF1) ,European Continental Ancestry Group ,Upstream Stimulatory Factor ,USF1 ,Hyperlipidemia, Familial Combined ,Single-nucleotide polymorphism ,Genetic Association Studie ,Polymorphism, Single Nucleotide ,Triglyceride ,White People ,Body Mass Index ,Single nucleotide polymorphism (SNP) ,Internal medicine ,medicine ,SNP ,Humans ,Genetic Predisposition to Disease ,Molecular Biology ,Genetic Association Studies ,Triglycerides ,Apolipoproteins A ,Genetics ,Apolipoprotein A-V (APOA5) ,biology ,PCSK9 ,Case-control study ,Cell Biology ,Middle Aged ,Endocrinology ,Italy ,Apolipoprotein A-V ,Case-Control Studies ,biology.protein ,KIF6 ,Upstream Stimulatory Factors ,lipids (amino acids, peptides, and proteins) ,Female ,Case-Control Studie ,Human - Abstract
Background Familial combined hyperlipidemia (FCH) is a polygenic and multifactorial disease characterized by a variable phenotype showing increased levels of triglycerides and/or cholesterol. The aim of this study was to identify single nucleotides (SNPs) in lipid-related genes associated with FCH. Methods and results Twenty SNPs in lipid-related genes were studied in 142 control subjects and 165 FCH patients after excluding patients with mutations in the LDLR gene and patients with the E2/E2 genotype of APOE. In particular, we studied the 9996G > A (rs2073658) and 11235C > T (rs3737787) variants in the Upstream Stimulatory Factor 1 gene (USF1), and the −1131T > C (rs662799) and S19W (rs3135506) variants in the Apolipoprotein A-V gene (APOA5). We found that the frequencies of these variants differed between patients and controls and that are associated with different lipid profiles. At multivariate logistic regression SNP S19W in APOA5 remained significantly associated with FCH independently of age, sex, BMI, cholesterol and triglycerides. Conclusions Our results show that the USF1 and APOA5 polymorphisms are associated with FCH and that the S19W SNP in the APOA5 gene is associated to the disease independently of total cholesterol, triglycerides and BMI. However, more extensive studies including other SNPs such as rs2516839 in USF1, are required.
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- 2015
40. Novel KIF6 Polymorphism Increases Susceptibility to Type 2 Diabetes Mellitus and Coronary Heart Disease in Han Chinese Men
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Gui-Bin Li, Dong-Qing Zhang, Bin Dai, and Ge Wu
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Blood Glucose ,Male ,medicine.medical_specialty ,Han chinese ,China ,Article Subject ,endocrine system diseases ,Endocrinology, Diabetes and Metabolism ,Kinesins ,Coronary Disease ,Biology ,Real-Time Polymerase Chain Reaction ,lcsh:Diseases of the endocrine glands. Clinical endocrinology ,Endocrinology ,Sex Factors ,Asian People ,Gene Frequency ,Risk Factors ,Internal medicine ,medicine ,Humans ,Genetic Predisposition to Disease ,Allele ,Genotyping ,Allele frequency ,Triglycerides ,Aged ,lcsh:RC648-665 ,Polymorphism, Genetic ,Cholesterol, HDL ,Case-control study ,Type 2 Diabetes Mellitus ,nutritional and metabolic diseases ,Lipid metabolism ,Middle Aged ,Phenotype ,Diabetes Mellitus, Type 2 ,Case-Control Studies ,KIF6 ,Female ,Biomarkers ,Research Article - Abstract
Objectives. The effect of theKIF6polymorphism Trp719Arg on the risk of T2DM and T2DM with CHD remains unclear.Methods. 946 unrelated subjects of Han Chinese origin were recruited, comprising 346 controls, 312 T2DM, and 288 T2DM + CHD patients. Genotyping was performed by high-resolution melting curve analysis using real-time qPCR. The impact of the variant on T2DM/T2DM + CHD and gene-sex interaction were evaluated by stepwise multiple regression analysis.Results. The frequencies of the Trp719 allele in T2DM and T2DM + CHD patients were similar to the control group, whereas significantly increased 719Arg allele frequencies were observed in male T2DM and T2DM + CHD patients compared with the corresponding control group. Further sex partition analysis revealed that only male 719Arg allele carriers had approximately 3-fold and 5-fold higher risk of T2DM and T2DM + CHD, respectively, than noncarriers. There was also a significant association between carriers and higher TG and lower HDL-C levels.Conclusion. The KIF6 719Arg allele may increase the risk of T2DM and T2DM + CHD only in Han Chinese men by modulating lipid metabolism, especially with regard to TG and HDL.
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- 2014
41. [PP.30.09] KIF6 GENE POLYMORPHISM IS ASSOCIATED WITH ARTERIAL RESISTANCE AND ATHEROSCLEROSIS IN PATIENTS WITH HYPERTENSION
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D A Zateyshchikov, M. Kochkina, L. Minushkina, O. Koroleva, N. Selezneva, and A. Nikitin
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Arterial resistance ,medicine.medical_specialty ,Physiology ,business.industry ,Internal medicine ,Internal Medicine ,KIF6 ,Medicine ,In patient ,Gene polymorphism ,Cardiology and Cardiovascular Medicine ,business ,Gastroenterology - Published
- 2017
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42. The KIF6Collapse⁎⁎Editorials published in the Journal of the American College of Cardiologyreflect the views of the authors and do not necessarily represent the views of JACCor the American College of Cardiology
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Topol, Eric J. and Damani, Samir B.
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kinesin-like protein 6 ,KIF6 ,myocardial infarction ,Cardiology and Cardiovascular Medicine ,coronary artery disease ,polymorphism - Published
- 2010
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43. The Collapse
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Eric J. Topol and Samir Damani
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Coronary artery disease ,medicine.medical_specialty ,Polymorphism (computer science) ,business.industry ,Internal medicine ,Cardiology ,medicine ,KIF6 ,Myocardial infarction ,Cardiology and Cardiovascular Medicine ,medicine.disease ,business - Published
- 2010
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44. P1–249: KIF6 719Arg carrier status association with homocysteine and C‐reactive protein in mild cognitive impairment and Alzheimer's disease
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Marwan N. Sabbagh and Michael Malek-Ahmadi
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medicine.medical_specialty ,biology ,Homocysteine ,Epidemiology ,business.industry ,Health Policy ,C-reactive protein ,Disease ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Endocrinology ,Developmental Neuroscience ,chemistry ,Internal medicine ,biology.protein ,KIF6 ,Carrier status ,Medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,Association (psychology) ,business ,Cognitive impairment - Published
- 2013
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45. Review of the cost effectiveness of pharmacogenetic-guided treatment of hypercholesterolaemia
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Michael J. Sorich, Michael D. Wiese, Brita Pekarsky, Rebekah O'Shea, Sorich, Michael J, Wiese, Michael D, O'Shea, Rebekah L, and Pekarsky, Brita
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medicine.medical_specialty ,cholesterol ester transfer proteins ,organic anion transporters ,Genotype ,Cost effectiveness ,genotype ,Cost-Benefit Analysis ,Hypercholesterolemia ,MEDLINE ,Kinesins ,Organic Anion Transporters ,Peptidyl-Dipeptidase A ,kinesin ,Pharmacotherapy ,Cholesterylester transfer protein ,medicine ,Humans ,humans ,Intensive care medicine ,pharmacogenetics ,Pharmacology ,Health economics ,hypercholesterolemia ,biology ,business.industry ,Liver-Specific Organic Anion Transporter 1 ,cost-benefit analysis ,Health Policy ,Anticholesteremic Agents ,Public Health, Environmental and Occupational Health ,Reproducibility of Results ,Cholesterol Ester Transfer Proteins ,peptidyl-dipeptidase A ,Pharmacogenetics ,anticholesteremic agents ,biology.protein ,Physical therapy ,KIF6 ,lipids (amino acids, peptides, and proteins) ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business ,SLCO1B1 ,hydroxymethylglutaryl-CoA reductase inhibitors - Abstract
Hypercholesterolaemia is a highly prevalent condition that has major health and cost implications for society. Pharmacotherapy is an important and effective treatment modality for hypercholesterolaemia, with 3-hydroxy-3-methylglutaryl coenzyme A reductase inhibitors ('statins') the most commonly used class of drugs. Over the past decade, there has been intensive research to identify pharmacogenetic markers to guide treatment of hypercholesterolaemia. This study aimed to review the evidence of incremental cost, effect and cost effectiveness of pharmacogenetic-guided treatment of hypercholesterolaemia. Finally, the economic context of the market for diagnostic tests (is it competitive or is there market power?) and the practicality of large-scale screening programmes to inform prescribing in a complex and varied market may limit the generalizability of the results of the specific CEAs to policy outcomes. The genotype of solute carrier organic anion transporter family member 1B1 (SLCO1B1) has recently been associated with increased risk of muscle toxicity with statin therapy and the review identified that exploration of cost effectiveness of this pharmacogenetic marker is likely warranted. Three cost-effectiveness analyses (CEAs) were identified that studied the value of screening for genotypes of angiotensin I converting enzyme (ACE), cholesteryl ester transfer protein (CETP), and kinesin family member 6 (KIF6) prior to initiating statin therapy. For all three CEAs, a major limitation identified was the reproducibility of the evidence supporting the clinical effect of screening for the pharmacogenetic marker. Associated issues included the uncertain value of pharmacogenetic markers over or in addition to existing approaches for monitoring lipid levels, and the lack of evidence to assess the effectiveness of alternative therapeutic options for individuals identified as poor responders to statin therapy. Refereed/Peer-reviewed
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- 2013
46. No evidence for cardiac dysfunction in Kif6 mutant mice
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Allan Lawrie, Sheila E. Francis, Loes P. C. Hoebers, Barbara Ciani, Roy Milner, Abdul G. Hameed, Andrew J. Grierson, and Ellen J. Bennett
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Cardiac function curve ,medicine.medical_specialty ,Pathology ,Anatomy and Physiology ,Mouse ,Mutant ,Myocardial Infarction ,Kinesins ,lcsh:Medicine ,Biology ,medicine.disease_cause ,Cardiovascular ,Cardiovascular System ,Molecular Genetics ,Mice ,Model Organisms ,Internal medicine ,medicine ,Genetics ,Animals ,Humans ,Myocardial infarction ,lcsh:Science ,Heart Failure ,Clinical Genetics ,Mutation ,Multidisciplinary ,lcsh:R ,Heart ,Animal Models ,medicine.disease ,Phenotype ,Lipids ,Mice, Mutant Strains ,Cardiovascular physiology ,Endocrinology ,Ageing ,Echocardiography ,Genetics of Disease ,KIF6 ,cardiovascular system ,Medicine ,lcsh:Q ,Research Article - Abstract
A KIF6 variant in man has been reported to be associated with adverse cardiovascular outcomes after myocardial infarction.\ud No clear biological or physiological data exist for Kif6. We sought to investigate the impact of a deleterious KIF6 mutation on\ud cardiac function in mice. Kif6 mutant mice were generated and verified. Cardiac function was assessed by serial\ud echocardiography at baseline, after ageing and after exercise. Lipid levels were also measured. No discernable adverse lipid\ud or cardiac phenotype was detected in Kif6 mutant mice. These data suggest that dysfunction of Kif6 is linked to other more\ud complex biological/biochemical parameters or is unlikely to be of material consequence in cardiac function.
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- 2013
47. Providing patients with pharmacogenetic test results affects adherence to statin therapy: results of the Additional KIF6 Risk Offers Better Adherence to Statins (AKROBATS) trial
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V. Herrera, J Shabbeer, B Schrader, Barnabie C Agatep, E J Stanek, Felix W. Frueh, James J. Devlin, Scott L. Charland, M Ryvkin, and H R Superko
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Male ,medicine.medical_specialty ,Statin ,medicine.drug_class ,Pharmacology ,Direct communication ,Persistence (computer science) ,Internal medicine ,Genetics ,medicine ,Humans ,Aged ,business.industry ,Middle Aged ,Confidence interval ,Pharmacogenetics ,KIF6 ,Molecular Medicine ,Patient Compliance ,Female ,Statin therapy ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business ,Pharmacogenetic Test - Abstract
Despite the clinical benefit of statin therapy and the numerous strategies used to improve adherence, no strategy has used direct communication of genetic test results to the patient as an adherence and persistence motivator. We investigated in a real-world setting the effect of a process of providing KIF6 test results and risk information directly to 647 tested patients on 6-month statin adherence (proportion of days covered (PDC)) and persistence compared with concurrent non-tested matched controls. Adjusted 6-month statin PDC was significantly greater in tested patients: 0.77 (95% confidence interval (CI) 0.72-0.82) vs controls 0.68 (95% CI 0.63-0.73), P
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- 2012
48. KIF6 719Arg allele is associated with statin effects on cholesterol levels in amnestic mild cognitive impairment and Alzheimer's disease patients
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D. Larry Sparks, Ian Levenson, Michael Malek-Ahmadi, and Marwan N. Sabbagh
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Male ,medicine.medical_specialty ,Statin ,medicine.drug_class ,Kinesins ,Disease ,Arginine ,Article ,chemistry.chemical_compound ,High-density lipoprotein ,Alzheimer Disease ,Internal medicine ,medicine ,Humans ,Cognitive Dysfunction ,Allele ,Alleles ,Aged ,Aged, 80 and over ,Cholesterol ,business.industry ,General Neuroscience ,General Medicine ,Middle Aged ,medicine.disease ,Psychiatry and Mental health ,Clinical Psychology ,Endocrinology ,chemistry ,Low-density lipoprotein ,KIF6 ,lipids (amino acids, peptides, and proteins) ,Female ,Amnesia ,Geriatrics and Gerontology ,Alzheimer's disease ,Hydroxymethylglutaryl-CoA Reductase Inhibitors ,business - Abstract
KIF6 719Arg allele carriers are thought to have a greater lipid lowering response from statin therapy than non-carriers. Given the continued interest in the relationship between cholesterol, statin use, amnestic mild cognitive impairment (aMCI), and Alzheimer’s disease (AD) investigating the role of KIF6 719Arg carrier status in these relationships may be of importance. Data from 86 patients (36 aMCI, 50 AD) with an average age of 76.87±8.22 years were used for this study. Total cholesterol (TC), low density lipoprotein (LDL), high density lipoprotein (HDL), and triglycerides were the outcome variables. 719Arg carriers taking statins had significantly lower TC (p < .001) and LDL (p < .001) levels than 719Arg carriers not taking statins. In addition, 719Arg carriers not taking statins had significantly higher TC (p = .004) and LDL (p < .001) than 719Arg non-carriers taking statins. Additional analyses indicated that ApoE e4 carrier status and statin use interaction is also associated with lower TC (p = .04), but not LDL (p = .06). The interaction between 719Arg and ApoE e4 carrier status on TC and LDL was not significant. This study is the first to demonstrate an association between lower cholesterol levels and statin use among KIF6 719Arg allele carriers with aMCI and AD. Accounting for 719Arg carrier status may be important in future studies investigating the link between cholesterol and AD and also for AD and aMCI clinical trials using statins as a treatment.
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- 2012
49. P2‐385: KIF6 719Arg allele predicts statin responsiveness in amnestic mild cognitive impairment and Alzheimer's disease patients
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Michael Malek-Ahmadi, Marwan N. Sabbagh, Ian Levenson, and Larry Sparks
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medicine.medical_specialty ,Statin ,Epidemiology ,medicine.drug_class ,business.industry ,Health Policy ,Disease ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Quality of life (healthcare) ,Developmental Neuroscience ,Respite care ,Interim ,medicine ,KIF6 ,Neurology (clinical) ,Club ,Geriatrics and Gerontology ,Cognitive impairment ,business ,Psychiatry - Abstract
assistant. At the end of the day, club staff return participants to their respective units at individualized times to ease transition to existing milieu. There is a two-week trial period upon admission to the program followed by weekly monitoring to assure participants meet the criteria of the Club. For some residents, it is an interim solution to disruptive behaviors on their home unit; for others, it is long-term placement. In rare cases, it is respite for a resident that is a victim of aggressive behavior. Discharge criteria from the Club setting include behavior that is dangerous to other residents or staff, lack of participation or benefit from therapeutic structure, and/or medical needs that cannot be met in the Club setting. Results: Although data is preliminary, there are many documented benefits from this approach including reduced incidents of aggressive behavior and a decreased need for psychoactive medications. Other advantages include an increase in normal sleep patterns, reduced falls and hospitalizations, as well as, improvement in the overall quality of life through a more structured activities program. Conclusions: Not only do the residents themselves benefit from temporary or ongoing management in this setting, but the therapeutic milieu of the facility overall is enhanced.
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- 2012
- Full Text
- View/download PDF
50. PATIENT KNOWLEDGE OF PHARMACOGENETIC INFORMATION IMPROVES ADHERENCE TO STATIN THERAPY: RESULTS OF THE ADDITIONAL KIF6 RISK OFFERS BETTER ADHERENCE TO STATINS (AKROBATS) TRIAL
- Author
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S.L. Charland, H. Superko, Robert S. Epstein, Barnabie C Agatep, James Devlin, Eric J. Stanek, Felix W. Frueh, and V. Herrera
- Subjects
Novel technique ,medicine.medical_specialty ,Statin ,business.industry ,medicine.drug_class ,Intervention (counseling) ,Physical therapy ,KIF6 ,Medicine ,Patient communication ,Statin therapy ,business ,Cardiology and Cardiovascular Medicine ,Pharmacogenetics - Abstract
Numerous strategies to improve statin adherence have been evaluated; however, none have utilized direct patient communication of genetic information as a motivator. This trial is the first to evaluate this novel technique. AKROBATS ([NCT01068834][1]) was a prospective, nonrandomized intervention
- Published
- 2012
- Full Text
- View/download PDF
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