Search

The exploitation of the dramatic negative solvatochromism of the [Ru(bipy)(CN)(4)] moiety (bipy = 2,2'-bipyridine) allows a change in solvent to reverse the direction of photoinduced energy transfer (PEnT) in two related dinuclear complexes. Both dyads consist of a [Ru(bpyam)(2)L(n)](2+) (Ru-bpyam) unit (bpyam = 4,4'-diethylamido-2,2'-bipyridine; L(n) = bis-bipyridyl-based bridging ligand) and a [Ru(L(n))(CN)(4)](2-) (Ru-CN) unit. Both termini have IR-active spectroscopic handles (amide carbonyl or cyanide, respectively) allowing the excited-state dynamics to be studied by time-resolved IR (TRIR) spectroscopy. One dyad (1) contains a relatively rigid exoditopic macrocyclic bis-bipyridyl bridging ligand (L(1)) and the other (2) contains a more flexible bis-bipyridyl bridging ligand with only one covalent linkage between the two bipyridyl binding sites (L(2)). The conformational effects on PEnT rates in these dyads are probed using a combination of luminescence and TRIR studies. In both 1 and 2 in D(2)O it is demonstrated that Ru-CN --> Ru-bpyam PEnT occurs (PEnT time scales were in the range 10 ps-3 ns) because the (3)MLCT energy of the Ru-CN terminus is higher than that of the Ru-bpyam terminus. Changing the solvent from D(2)O to CH(3)CN results in lowering the (3)MLCT energy of the Ru-CN unit below that of the Ru-bpyam unit such that in both dyads a reversal in the direction of PEnT to Ru-bpyam --> Ru-CN (time scales of 10 ps-2 ns) occurs. Complex kinetic behavior results from the presence of a dark (3)MLCT excited state formulated as {(bpyam)(2)Ru(3+)(L(n*-))} and by the presence of multiple conformers in solution which have different Ru...Ru separations giving rise to different energy transfer rates.

Photoinduced relaxation processes of five structurally characterized Pseudomonas aeruginosa Re(I)(CO)(3)(alpha-diimine)(HisX) (X = 83, 107, 109, 124, 126)Cu(II) azurins have been investigated by time-resolved (ps-ns) IR spectroscopy and emission spectroscopy. Crystal structures reveal the presence of Re-azurin dimers and trimers that in two cases (X = 107, 124) involve van der Waals interactions between interdigitated diimine aromatic rings. Time-dependent emission anisotropy measurements confirm that the proteins aggregate in mM solutions (D(2)O, KP(i) buffer, pD = 7.1). Excited-state DFT calculations show that extensive charge redistribution in the Re(I)(CO)(3) --diimine (3)MLCT state occurs: excitation of this (3)MLCT state triggers several relaxation processes in Re-azurins whose kinetics strongly depend on the location of the metallolabel on the protein surface. Relaxation is manifested by dynamic blue shifts of excited-state nu(CO) IR bands that occur with triexponential kinetics: intramolecular vibrational redistribution together with vibrational and solvent relaxation give rise to subps, approximately 2, and 8-20 ps components, while the approximately 10(2) ps kinetics are attributed to displacement (reorientation) of the Re(I)(CO)(3)(phen)(im) unit relative to the peptide chain, which optimizes Coulombic interactions of the Re(I) excited-state electron density with solvated peptide groups. Evidence also suggests that additional segmental movements of Re-bearing beta-strands occur without perturbing the reaction field or interactions with the peptide. Our work demonstrates that time-resolved IR spectroscopy and emission anisotropy of Re(I) carbonyl-diimine complexes are powerful probes of molecular dynamics at or around the surfaces of proteins and protein-protein interfacial regions.

The photochemistry of (η6-C6H6)M(CO)3 (M = Cr or Mo) is described. Photolysis with λexc. > 300 nm of (η6-C6H6)Cr(CO)3 in low-temperature matrixes containing CO produced the CO-loss product, while lower energy photolysis (λexc. > 400 nm) produced Cr(CO)6. Pulsed photolysis (λexc. = 400 nm) of (η6-C6H6)Cr(CO)3 in n-heptane solution at room temperature produced an excited-state species (1966 and 1888 cm−1) that decays over 150 ps to (η6-C6H6)Cr(CO)2(n-heptane) (70%) and (η6-C6H6)Cr(CO)3 (30%). Pulsed photolysis (λexc. = 266 nm) of (η6-C6H6)Cr(CO)3 in n-heptane produced bands assigned to (η6-C6H6)Cr(CO)2(n-heptane) (1930 and 1870 cm−1) within 1 ps. These bands increase with a rate identical to the rate of decay of the excited-state species and the rate of recovery of (η6-C6H6)Cr(CO)3. Photolysis of (η6-C6H6)Mo(CO)3 at 400 nm produced an excited-state species (1996 and 1898 cm−1) and traces of (η6-C6H6)Mo(CO)2(n-heptane) within 1 ps. For the chromium system CO-loss can occur following excitation at both 400 and 266 nm via an avoided crossing of a MACT (metal-to-arene charge transfer) and MCCT/LF (metal-to-carbonyl charge transfer/ligand field) states. This leads to an unusually slow CO-loss following excitation with 400 nm light. Rapid CO-loss is observed following 266 nm excitation because of direct population of the MCCT/LF state. The quantum yield for CO-loss in the chromium system decreases with increasing excitation energy because of the competing population of a high-energy unreactive MACT state. For the molydenum system CO-loss is a minor process for 400 nm excitation, and an unreactive MACT state is evident from the TRIR spectra. A higher quantum yield for CO-loss is observed following 266 nm excitation through both direct population of the MCCT/LF state and production of a vibrationally excited reactive MACT state. This results in the quantum yield for CO-loss increasing with increasing excitation energy.

The dyad RuLRe contains (Re(bpy)(CO)3Cl) and (Ru(bpy)(bpyam)2)2+ termini (bpy = 2,2'-bipyridine; bpyam = 4,4'-diethylamido-2,2'-bipyridine) separated by a flexible ethylene spacer. Luminescence studies reveal the expected Re --Ru photoinduced energy transfer, with partial quenching of Re(I)-based triplet metal-to-ligand charge-transfer (3MLCT) luminescence and consequent sensitization of the Ru(II)-based 3MLCT luminescence, which has a component with a grow-in lifetime of 0.76 (+/-0.2) ns. The presence of IR-active spectroscopic handles on both termini [CO ligands directly attached to Re(I) and amide carbonyl substituents on the bpy ligands coordinated to Ru(II)] allowed the excited-state dynamics to be studied by time-resolved IR (TRIR) spectroscopy in much more detail than allowed by luminescence methods. A combination of picosecond- and nanosecond-time-scale TRIR studies revealed the presence of at least three distinct Re --Ru energy-transfer processes, with lifetimes of ca. 20 ps and 1 and 13 ns. This complex behavior occurs because of a combination of two different Ru-based 3MLCT states (Ru --L and Ru --bpyam), which are sensitized by energy transfer from the Re(I) donor at different rates; and the presence of at least two conformers of the flexible molecule RuLRe, which have different Re...Ru separations.

Excited-state dynamics of [Re(Etpy)(CO)3(bpy)]+ was studied in three imidazolium ionic liquids by time-resolved IR and emission spectroscopy on the picosecond to nanosecond time scale. Low-lying excited states were characterized by TD-DFT calculations, which also provided molecular dipole moment vectors in the relevant electronic states. TRIR spectra in ionic liquids show initial populations of two excited states: predominantly bpy-localized 3IL and 3MLCT, characterized by nu(CO) bands shifted to lower and higher frequencies, respectively, relative to the ground state. Internal conversion of 3IL to the lowest triplet 3MLCT occurred on a time scale commensurate with solvent relaxation. The nu(CO) IR bands of the 3MLCT state undergo a dynamic shift to higher wavenumbers during relaxation. Its three-exponential kinetics were determined and attributed to vibrational cooling (units of picoseconds), energy dissipation to the bulk solvent (tens of picoseconds), and solvent relaxation, the lifetime of which increases with increasing viscosity: [EMIM]BF4 (330 ps)[BMIM]BF4 (470 ps)[BMIM]PF6 (1570 ps). Time-resolved phosphorescence spectra in [BMIM]PF6 show a approximately 2 ns drop in intensity due to the 3IL --3MLCT conversion and a dynamic Stokes shift to lower energies with a lifetime decreasing from 1.8 ns at 21 degrees C to 1.1 ns at 37 degrees C, due to decreasing viscosity of the ionic liquid. It is proposed that solvent relaxation predominantly involves collective translational motions of ions. It drives the 3IL --3MLCT conversion, increases charge reorganization in the lowest excited-state 3MLCT, and affects vibrational anharmonic coupling, which together cause the dynamic shift of excited-state IR bands. TRIR spectroscopy of carbonyl-diimine complexes emerges as a new way to investigate various aspects of solvation dynamics, while the use of slowly relaxing ionic liquids offers new insight into the photophysics of Re(I) carbonyl polypyridyls.

The structural dynamics following photoexcitation of a photosensing BLUF (blue light sensing using FAD) domain protein have been investigated by ultrafast transient infrared spectroscopy. Specifically, the transcriptional antirepressor AppA from Rhodobacter sphaeroides has been studied in the light and dark adapted forms and in photoactive and inactive mutants W104F and Q63L. A transient absorption has been observed at 1666 cm(-1) which is a marker mode for the photoactive state of the protein. This instantaneously formed transient is tentatively assigned to a vibrational mode of a protein residue modified through its interaction with the excited state of the chromophore. A plausible candidate consistent with the mutant studies is the carbonyl stretch of the Q63 amide side chain. These results suggest that modification of the strength of protein chromophore H-bonded interactions is the primary step in the BLUF domain photocycle. No new species were observed to be formed during the first nanosecond. Measurement of the ultrafast ground state recovery showed that the excited state of light adapted AppA is strongly quenched compared to the dark adapted state. It is proposed that the reorganization which occurs to form the signaling state is favorable to electron-transfer quenching.

This paper reports time-resolved infrared (TRIR) spectroscopic studies on a series of weakly luminescent or nonluminescent 2,2'-bipyrimidine-based complexes to probe their electronic structure and the dynamic behavior of their excited states on the picosecond and nanosecond time scales. The complexes are mononuclear [Re(CO)3Cl(bpm)] (1), [Ru(CN)4(bpm)]2- (2), and [Ru(bpyam)2(bpm)]2+ (3) [bpm=2,2'-bipyrimidine; bpyam=2,2'-bipyridine-4,4'-(CONEt2)2] and their homodinuclear analogues [{Re(CO)3Cl}2(mu-bpm)] (4), [{Ru(CN)4}2(mu-bpm)]2- (5), and [{Ru(bpyam)2}2(mu-bpm)]4+ (6). Complex 1 shows the characteristic shift of the three nu(CO) bands to higher energy in the Re--bpm triplet metal-to-ligand charge-transfer (3MLCT) state, which has a lifetime of 1.2 ns. In contrast, the dinuclear complex 4 shows nu(CO) transient bands to both higher and lower energy than the ground state indicative of, on the IR time scale, an asymmetric excited state [(OC)3ClReI(bpm*-)ReII(CO)3Cl] whose lifetime is 46 ps. The cyanoruthenate complexes 2 and 5 show comparable behavior, with a shift of the nu(CN) bands to higher energy in the excited state for mononuclear 2 but two sets of transient bands-one to higher energy and one to lower energy-in dinuclear 5, consistent with an asymmetric charge distribution [(NC)4RuII(bpm*-)RuIII(CN)4]4- in the 3MLCT state. These cyanoruthenate complexes have much longer lifetimes in D2O compared with CH3CN, viz., 250 ps and 3.4 ns for 2 and 65 ps and 1.2 ns for 5 in CH3CN and D2O, respectively. In complex 3, both higher-energy Ru--bpyam and lower-energy Ru--bpm 3MLCT states are formed following 400 nm excitation; the former decays rapidly (tau=6-7 ps) to the latter, and the subsequent decay of the Ru--bpm 3MLCT state occurs with a lifetime of 60 or 97 ns in D2O or CH3CN, respectively. Similar behavior is shown by dinuclear 6 in both D2O and CH3CN, with initial interconversion from the Ru--bpyam to the Ru--bpm 3MLCT state occurring with tau approximately 7 ps and the resultant Ru--bpm 3MLCT state decaying on the nanosecond time scale.

The spectroscopic characterisation of a series of [Ru(LL)(CN)(4)](2-) complexes, where LL = 1,10-phenanthroline (phen) and its methyl- and phenyl-substituted derivatives and several deuteriated isotopologues are reported. The optical and vibrational properties of these complexes are compared with that of the series of 2,2'-bipyridine (bipy) derivatives and analogous [Ru(LL)(3)](2+) complexes. It has been demonstrated that substitution at the 4,4' positions of bipy and 4,7-positions of phen by electron donating (CH3) and withdrawing (C6H5, COO-) groups induces a pronounced blue and red shift, respectively, in the lowest energy (MLCT)-M-1 absorption band of [Ru(LL)(CN)(4)](2-). The energy of the emission originating from the (MLCT)-M-3 excited state is found to be dependant on the nature of the vibrational modes of the aromatic rings and the electron donating and/or withdrawing properties of the substituents. Single-mode Franck-Condon analysis indicates that methyl substitution leads to a significant increase in the Huang-Rhys factor (S-M), while phenyl substitution results in a decrease in S-M for both series (bipy and phen) of complexes. The rate of non-radiative (k(nr)) and radiative decay (k(ph)) to the ground state and the parameters of thermally activated deactivation pathways (A(4th), Delta E-4th and A(dd), Delta E-dd) were estimated from the temperature dependence of luminescence quantum yields and lifetimes. It has been demonstrated that the non-radiative decay rate and the temperature dependent decay processes are more efficient for bipy complexes than for phen derivatives due to the rigidity of the latter ligand.

The photoreactions of the Pr ground state of cyanobacterial phytochrome Cph1 from Synechocystis PCC 6803 have been investigated by picosecond time-resolved mid-infrared spectroscopy at ambient temperature. With femtosecond excitation of the Pr state at 640 nm, the photoisomerized Lumi-R product state is generated with kinetics and associated difference spectra indicative of vibrational cooling with tau(1) = 3 ps time constant and excited state decay with tau(1) = 3 ps, tau(2) = 14 ps, and tau(3) = 134 ps time constants. The Lumi-R state is characterized by downshifted absorption of three C=C modes assigned to C(15)=C(16), C(4)=C(6), and a delocalized C=C mode, in addition to the downshifted C(19)=O mode. The Lumi-R minus Pr difference spectrum is indicative of global restructuring of the chromophore on the ultrafast timescale, which is discussed in light of C(15) Z/E photoisomerization in addition to changes near C(5), which could be low bond order torsional angle changes.

Ultrafast time-resolved infrared (TRIR) spectra of flavin adenine dinucleotide (FAD) and the anion of lumiflavin (Lf-) are described. Ground-state recovery and excited-state decay of FAD reveal a common dominant ultrafast relaxation and a minor slower component. The Lf- transient lacks a fast component. No intermediate species are observed, suggesting that the quenching mechanism is internal conversion promoted by interaction of the adenine and isoalloxazine rings in FAD. Modes are assigned, and the potential for extension of the TRIR method to photoactive proteins is discussed.

We report the first transcutaneous Raman spectrum of human bone in vivo obtained at skin-safe laser illumination levels. The spectrum of thumb distal phalanx was obtained using spatially offset Raman spectroscopy (SORS), which provides chemically specific information on deep layers of human tissue, well beyond the reach of existing comparative approaches. The spectroscopy is based on collecting Raman spectra away from the point of laser illumination using concentric rings of optical fibers. As a generic analytical tool this approach paves the way for a range of uses including disease diagnosis, noninvasive probing of pharmaceutical products, biofilms, catalysts, paints, and in dermatological applications.

The vibrational and photophysical properties of mononuclear ruthenium(II) and ruthenium(III) polypyridyl complexes based on the, ligands 2-(5-(pyridin-2"-yl)-1'H-1',2',4'-triaz-3'-yl)-thiophene, 2-(5-(pyrazin-2"-yl)-1'H-1',2,4-triaz-3'-yl)-thiophene, are reported. The effect of the introduction of the non-innocent thiophene group on the properties of the triazole based ruthenium(II) complex is examined. The pH sensitive 1,2,4-triazole group, although influenced by the electron withdrawing nature of the thiophene group, does not facilitate excited state interaction of the thiophene and Ru(II) centre. Deuteriation and DFT calculations are employed to enable a deeper understanding of the interaction between the two redox-active centres and rationalise the difference between the extent of ground and excited state interaction in this simple dyad. The results obtained provide considerable evidence in support of earlier studies examining differences in ground and excited state interaction in multinuclear thiophene-bridged systems, in particular with respect to HOMO- and LUMO- mediated superexchange interaction processes. (C) 2004 Elsevier B.V. All rights reserved.

The synthesis, characterization, and electrochemical, photophysical, and photochemical properties of the binuclear compounds [(Ru(H-8-bpy)(2))(2)((Metr)(2)Pz)](PF6)(2) (1) and [(Ru(D-8-bpy)(2))(2)((Metr)(2)Pz)](PF6)(2) (2), where bpy is 2,2'-bipyridine and H-2(Metr)(2)Pz is the planar ligand 2,5-bis(5'-methyl-4'H-[1,2,4]triaz-3'-yl)-pyrazine, are reported. Electrochemical and spectro-electrochemical investigations indicate that the ground-state interaction between each metal center is predominantly electrostatic and in the mixed-valence form only a low level of ground-state delocalization is present. Resonance Raman, transient, and time-resolved spectroscopies enable a detailed assignment to be made of the excited-state photophysical properties of the complexes. Deuteriation is employed to both facilitate spectroscopic characterization and investigate the nature of the lowest excited states.

Time-resolved infrared spectroscopy was used to probe the photochemistry of three (μ(2)-alkyne)Co(2)(CO)(6) complexes. The data indicate the formation of a triplet diradical species, with lifetimes in the range 38-71 ps. Theoretical calculations support these experimental findings. No evidence for the CO loss species, (μ(2)-alkyne)Co(2)(CO)(5), was observed, and this is rationalized by the low quantum yield for this process at the excitation wavelengths used.

Photoinduced Fe-to-bpy charge transfer in [{Cp(dppe)Fe}(mu-C[triple bond]CC[triple bond]N){Re(CO)(3)(bpy)}]PF(6) has been observed by ps-TRIR spectroscopy, supported by UV-Vis/IR spectroelectrochemistry and DFT calculations.

The femto- and picosecond time resolved spectroscopy of (eta(6)-cis-stilbene)Cr(CO)(3) provides evidence for three optically accessible excited states one leading to cis-trans isomerisation of the coordinated stilbene ligand and another which results in a slow release of CO.

Two blue absorbing and emitting mutants (S65G/T203V/E222Q and S65T at pH 5.5) of the green fluorescent protein (GFP) have been investigated through ultrafast time resolved infra-red (TRIR) and fluorescence spectroscopy. In these mutants, in which the excited state proton transfer reaction observed in wild type GFP has been blocked, the photophysics are dominated by the neutral A state. It was found that the A* excited state lifetime is short, indicating that it is relatively less stabilised in the protein matrix than the anionic form. However, the lifetime of the A* state can be increased through modifications to the protein structure. The TRIR spectra show that a large shifts in protein vibrational modes on excitation of the A* state occurs in both these GFP mutants. This is ascribed to a change in H-bonding interactions between the protein matrix and the excited state.

A combined experimental and theoretical study is presented of several ligand addition reactions of the triplet fragments (3)Fe(CO)(4) and (3)Fe(CO)(3) formed upon photolysis of Fe(CO)(5). Experimental data are provided for reactions in liquid n-heptane and in supercritical Xe (scXe) and Ar (scAr). Measurement of the temperature dependence of the rate of decay of (3)Fe(CO)(4) to produce (1)Fe(CO)(4)L (L = heptane or Xe) shows that these reactions have significant activation energies of 5.2 (+/-0.2) and 7.1 (+/-0.5) kcal mol(-1) respectively. Nonadiabatic transition state theory is used to predict rate constants for ligand addition, based on density functional theory calculations of singlet and triplet potential energy surfaces. On the basis of these results a new mechanism (spin-crossover followed by ligand addition) is proposed for these spin forbidden reactions that gives good agreement with the new experimental results as well as with earlier gas-phase measurements of some addition rate constants. The theoretical work accounts for the different reaction order observed in the gas phase and in some condensed phase experiments. The reaction of (3)Fe(CO)(4) with H(2) cannot be easily probed in n-heptane since conversion to (1)Fe(CO)(4)(heptane) dominates. scAr doped with H(2) provides a unique environment to monitor this reaction--Ar cannot be added to form (1)Fe(CO)(4)Ar, and H(2) addition is observed instead. Again theory accounts for the reactivity and also explains the difference between the very small activation energy measured for H(2) addition in the gas phase (Wang, W. et al. J. Am. Chem. Soc. 1996, 118, 8654) and the larger values obtained here for heptane and Xe addition in solution.

Time-resolved infrared vibrational spectroscopy is a structurally sensitive probe of the excited-state properties of matter. The technique has found many applications in the study of molecules in dilute solution phase but has rarely been applied to crystalline samples. We report on the use of a sensitive pump–probe time-resolved infrared spectrometer and sample handling techniques for studies of the ultrafast excited-state dynamics of crystalline materials. The charge transfer excited states of crystalline metal carbonyls and the proton transfer of dihydroxyquinones are presented and compared with the solution phase.

The mechanism of blue light sensing in the photoactive protein AppA is investigated by transient infra-red spectroscopy. Modes associated with the flavin excited state and perturbation of the protein are detected.

A combination of picosecond time-resolved infrared spectroscopy, picosecond transient absorption spectroscopy, and nanosecond flash photolysis was used to elucidate the nature and dynamics of a manifold of the lowest excited states in Pt(phen-NDI)Cl 2 ( 1), where NDI = strongly electron accepting 1,4,5,8-naphthalene-diimide group. 1 is the first example of a Pt (II)-diimine-diimide dyad. UV/vis/IR spectroelectrochemistry and EPR studies of electrochemically generated anions confirmed that the lowest unoccupied molecular orbital (LUMO) in this system is localized on the NDI acceptor group. The lowest allowed electronic transition in Pt(phen-NDI)Cl 2 is charge-transfer-to-diimine of a largely Pt--phen metal-to-ligand charge-transfer (MLCT) character. Excitation of 1 in the 355-395 nm range initiates a series of processes which involve excited states with the lifetimes of 0.9 ps ( (1)NDI*), 3 ps ( (3)MLCT), 19 ps (vibrational cooling of "hot" (3)NDI and of "hot" NDI ground state), and 520 mus ( (3)NDI). Excitation of 1 with 395 nm femtosecond laser pulses populates independently the (1)MLCT and the (1)NDI* excited states. A thermodynamically possible decay of the initially populated (1)MLCT to the charge-transfer-to-NDI excited state, [Pt (III)(phen-NDI (-*))Cl 2], is not observed. This finding could be explained by an ultrafast ISC of the (1)MLCT to the (3)MLCT state which lies about 0.4 eV lower in energy than [Pt (III)(phen-NDI (-*))Cl 2]. The predominant decay pathway of the (3)MLCT is a back electron transfer process with approximately 3 ps lifetime, which also causes partial population of the vibrationally hot ground state of the NDI fragment. The decay of the (1)NDI* state in 1 populates vibrationally hot ground state of the NDI, as well as vibrationally hot (3)NDI. The latter relaxes to form (3)NDI state, that is, [Pt(phen- (3)NDI)Cl 2]*, which possesses a remarkably long lifetime for a Pt (II) complex in fluid solution of 520 mus. The IR signature of this excited state includes the nu(CO) bands at 1607 and 1647 cm (-1), which are shifted considerably to lower energies if compared to their ground-state counterparts. The assignment of the vibrational bands is supported by the density-functional theory calculations in CH 2Cl 2. Pt(phen-NDI)Cl 2 acts as a modest photosensitizer of singlet oxygen.

The paper reports the synthesis, structural characterization, electrochemistry, ultrafast time-resolved infrared (TRIR) and transient absorption (TA) spectroscopy associated with two independent d (8) square planar Pt(II) diimine chromophores, Pt(dnpebpy)Cl 2 ( 1) and Pt(dnpebpy)(C[triple bond]Cnaph) 2 ( 2), where dnpebpy = 4,4'-(CO 2CH 2- (t) Bu) 2-2,2'-bipyridine and CCnaph = naphthylacetylide. The neopentyl ester substitutions provided markedly improved complex solubility relative to the corresponding ethyl ester which facilitates synthetic elaboration as well as spectroscopic investigations. Following 400 nm pulsed laser excitation in CH 2Cl 2, the 23 cm (-1) red shift in the nu C=O vibrations in 1 are representative of a complex displaying a lowest charge-transfer-to-diimine (CT) excited state. The decay kinetics in 1 are composed of two time constants assigned to vibrational cooling of the (3)CT excited-state concomitant with its decay to the ground state (tau = 2.2 +/- 0.4 ps), and to cooling of the formed vibrationally hot ground electronic state (tau = 15.5 +/- 4.0 ps); we note that an assignment of the latter to a ligand field state cannot be excluded. Ultrafast TA data quantitatively support these assignments yielding an excited-state lifetime of 2.7 +/- 0.4 ps for the (3)CT excited-state of 1 and could not detect any longer-lived species. The primary intention of this study was to develop a Pt (II) complex ( 2) bearing dual infrared spectroscopic tags (C[triple bond]C attached to the metal and CO (ester) attached to the diimine ligand) to independently track the movement of charge density in different segments of the molecule following pulsed light excitation. Femtosecond laser excitation of 2 in CH 2Cl 2 at 400 nm simultaneously induces a red-shift in both the nu C=O (-30 cm (-1)) and the nu C[triple bond]C (-61 cm (-1)) vibrations. The TRIR data in 2 are consistent with a charge transfer assignment, and the significant decrease of the energy of the nu C[triple bond]C vibration suggests a considerable contribution from the acetylide ligands in the highest occupied molecular orbital. Therefore, we assign the lowest energy optical transitions in 2 as a combination of metal-to-ligand and ligand-to-ligand charge transfers. The excited-state of 2 is emissive at RT, with an emission maximum at 715 nm, quantum yield of 0.0012, and lifetime of 23 ns.

Energy flow in biological structures often requires submillisecond charge transport over long molecular distances. Kinetics modeling suggests that charge-transfer rates can be greatly enhanced by multistep electron tunneling in which redox-active amino acid side chains act as intermediate donors or acceptors. We report transient optical and infrared spectroscopic experiments that quantify the extent to which an intervening tryptophan residue can facilitate electron transfer between distant metal redox centers in a mutant Pseudomonas aeruginosa azurin. Cu I oxidation by a photoexcited Re I -diimine at position 124 on a histidine(124)-glycine(123)-tryptophan(122)-methionine(121) β strand occurs in a few nanoseconds, fully two orders of magnitude faster than documented for single-step electron tunneling at a 19 angstrom donor-acceptor distance.

The neutral form of the chromophore in wild-type green fluorescent protein (wtGFP) undergoes excited-state proton transfer (ESPT) upon excitation, resulting in characteristic green (508 nm) fluorescence. This ESPT reaction involves a proton relay from the phenol hydroxyl of the chromophore to the ionized side chain of E222, and results in formation of the anionic chromophore in a protein environment optimized for the neutral species (the I* state). Reorientation or replacement of E222, as occurs in the S65T and E222Q GFP mutants, disables the ESPT reaction and results in loss of green emission following excitation of the neutral chromophore. Previously, it has been shown that the introduction of a second mutation (H148D) into S65T GFP allows the recovery of green emission, implying that ESPT is again possible. A similar recovery of green fluorescence is also observed for the E222Q/H148D mutant, suggesting that D148 is the proton acceptor for the ESPT reaction in both double mutants. The mechanism of fluorescence emission following excitation of the neutral chromophore in S65T/H148D and E222Q/H148D has been explored through the use of steady state and ultrafast time-resolved fluorescence and vibrational spectroscopy. The data are contrasted with those of the single mutant S65T GFP. Time-resolved fluorescence studies indicate very rapid (< 1 ps) formation of I* in the double mutants, followed by vibrational cooling on the picosecond time scale. The time-resolved IR difference spectra are markedly different to those of wtGFP or its anionic mutants. In particular, no spectral signatures are apparent in the picosecond IR difference spectra that would correspond to alteration in the ionization state of D148, leading to the proposal that a low-barrier hydrogen bond (LBHB) is present between the phenol hydroxyl of the chromophore and the side chain of D148, with different potential energy surfaces for the ground and excited states. This model is consistent with recent high-resolution structural data in which the distance between the donor and acceptor oxygen atoms is < or = 2.4 A. Importantly, these studies indicate that the hydrogen-bond network in wtGFP can be replaced by a single residue, an observation which, when fully explored, will add to our understanding of the various requirements for proton-transfer reactions within proteins.

We will describe the application of GFP as a testing ground in which to investigate a number of ultrafast reactions in proteins.

Breast calcifications are found in both benign and malignant lesions and their composition can indicate the disease state. Calcium oxalate (dihydrate) (COD) is associated with benign lesions, however calcium hydroxyapatite (HAP) is found mainly in proliferative lesions including carcinoma. The diagnostic practices of mammography and histopathology examine the morphology of the specimen. They can not reliably distinguish between the two types of calcification, which may indicate the presence of a cancerous lesion during mammography. We demonstrate for the first time that Kerr-gated Raman spectroscopy is capable of non-destructive probing of sufficient biochemical information from calcifications buried within tissue, and this information can potentially be used as a first step in identifying the type of lesion. The method uses a picosecond pulsed laser combined with fast temporal gating of Raman scattered light to enable spectra to be collected from a specific depth within scattering media by collecting signals emerging from the sample at a given time delay following the laser pulse. Spectra characteristic of both HAP and COD were obtained at depths of up to 0.96 mm, in both chicken breast and fatty tissue; and normal and cancerous human breast by utilising different time delays. This presents great potential for the use of Raman spectroscopy as an adjunct to mammography in the early diagnosis of breast cancer.

The complex transient vibrational spectra of wild type (wt) GFP have been assigned through polarization anisotropy measurements on isotopically edited proteins. Protein chromophore interactions modify considerably the vibrational structure, compared to the model chromophore in solution. An excited-state vibrational mode yields information on excited-state electronic structure. The proton relay pathway is characterized in more detail, and the protonation of the remote E222 residue is shown to occur in a concerted step. Modifications to protein vibrational modes are shown to occur following electronic excitation, and the potential for these to act as a trigger to the proton relay reaction is discussed.

Picosecond time-resolved mid-infrared absorption changes of the wild type green fluorescent protein from Aequorea victoria are reported on structural events during the photocycle. Concomitant with rapid H/D transfer following excitation of the neutral A state at 400 nm, a transient signal at 1721/1711 cm(-1) (H/D) developed belonging to protonated glutamate 222, which was definitively assigned using the E222D mutant from the altered proton-transfer kinetics to aspartate in addition to the altered band position and intensity in the spectra. A transient at 1697 cm(-1), assigned to a structural perturbation of glutamine 69, had a H/D kinetic isotope effect of32, showing the conformational dynamics to be sensitive to the active site H/D vibrations. The kinetic data up to 2 ns after excitation in the 1250-1800 cm(-1) region in D2O provided 10 and 75 ps time constants for the excited-state deuteron transfer and the associated A1* - A1 and A2* - A2 difference spectra and showed the radiative intermediate I state vibrations and the transient accumulation of the long-lived ground-state intermediate I2. Assignments of chromophore modes for the A1, A2, and I2 ground states are proposed on the basis of published model compound studies (Esposito, A. P.; Schellenberg, P.; Parson, W. W.; Reid, P. J. J. Mol. Struct. 2001, 569, 25 and He, X.; Bell, A. F.; Tonge, P. J. J. Phys. Chem. B 2002, 106, 6056). Tentative assignments for the singlet-state intermediates A1*, A2*, and I* are discussed. An unexpected and unassigned band that may be a C=C chromophore vibration was observed in the ground state (1665 cm(-1)) as well as in all photocycle intermediates. Optical dumping of the transient I population was achieved using an additional 532 nm pulse and the directly obtained I2 - I* difference spectrum was highly similar to the I2 - I* photocycle spectrum. The pump-dump-probe spectrum differed from the pump-probe photocycle difference spectrum with respect to the intensity of the phenol 1 mode at 1578 cm(-1), suggesting stronger delocalization of the negative charge onto the phenolic ring of the anionic chromophore in the dumped I2 state. Indication for structural heterogeneity of the chromophore, Glu 222, and the chromophore environment was found in the two parallel proton-transfer reactions and their distinct associated ground- and intermediate-state vibrations. Vibrational spectral markers at 1695 cm(-1) assigned to Gln 69, at 1631 cm(-1) belonging to a C=C mode, and at 1354 cm(-1) belonging to a phenolate vibration further indicated the I2 and I* states to be unrelaxed.

Green fluorescent protein (GFP) is highly fluorescent with blue excitation despite the creation of a buried charge resulting from photoionization of the chromophore and neutralization of Glu 222. These major electrostatic rearrangements do not lead to rapid internal conversion processes. A competing phototransformation reaction, which ionizes the chromophore and decarboxylates Glu 222, causes electrostatic and structural changes which are very similar to those in the fluorescence photocycle. The X-ray crystallography and IR spectroscopy of phototransformed GFP provides evidence for relaxations involving protein, chromophore, solvent, and CO 2 . Time-resolved and static infrared spectroscopy and X-ray crystallography to 1.85 A resolution identify structural mechanisms common to phototransformation and to the fluorescence photocycle. A detailed study of the ps time-resolved IR absorption during the fluorescence photocycle has been reported. Through global fitting the species associated difference spectra were determined showing the vibrational response to excited state proton transfer in addition to the transient population of a late ground state photocycle intermediate 'I 2 '. We additionally used pump-dump-probe spectroscopy to dump the deprotonated radiative state 'I*' and directly provide the I 2 -I* difference spectrum, which strongly resembled its photocycle counterpart. We discuss spectral markers that specifically report on structural relaxation during the photocycle which may be compared with structural relaxations in the competing phototransformation reaction.

A series of complexes of the type K(2)[Ru(NN)(CN)(4)] has been prepared, in which NN is a diimine ligand, and were investigated for both their structural and photophysical properties. The ligands used (and the abbreviations for the resulting complexes) are 3-(2-pyridyl)pyrazole (Ru-pypz), 2,2'-bipyrimidine (Ru-bpym), 5,5'-dimethyl-2,2'-bipyridine (Ru-dmb), 1-ethyl-2-(2-pyridyl)benzimidazole (Ru-pbe), bidentate 2,2':6',2'''-terpyridine (Ru-tpy). The known complexes with = 2,2'-bipyridine (Ru-bpy) and 1,10-phenathroline (Ru-phen) were also included in this work. A series of crystallographic studies showed that the [Ru(NN)(CN)(4)](2-) complex anions form a range of elaborate coordination networks when crystallised with either K(+) or Ln(3+) cations. The K(+) salts are characterised by a combination of near-linear Ru-CN-K bridges, with the cyanides coordinating to K(+) in the usual 'end-on' mode, and unusual side-on pi-type coordination of cyanide ligands to K(+) ions. With Ln(3+) cations in contrast only Ru-CN-Ln near-linear bridges occurred, affording 1-dimensional helical or diamondoid chains, and 2-dimensional sheets constituted from linked metallamacrocyclic rings. All of the K(2)[Ru(CN)(4)] complexes show a reversible Ru(II)/Ru(III) couple (ca.+0.9 V vs. Ag/AgCl in water), the exception being Ru-tpy whose oxidation is completely irreversible. Luminescence studies in water showed the presence of (3)MLCT-based emission in all cases apart from Ru-bpym with lifetimes of tens/hundreds of nanoseconds. Time-resolved infrared studies showed that in the (3)MLCT excited state the principal C-N stretching vibration shifts to positive energy by ca. 50 cm(-1) as a consequence of the transient oxidation of the metal centre to Ru(III) and the reduction in back-bonding to the cyanide ligands; measurement of transient decay rates allowed measurements of (3)MLCT lifetimes for those complexes which could not be characterised by luminescence spectroscopy. A few complexes were also examined in different solvents (MeCN, dmf) and showed much weaker emission and shorter excited-state lifetimes in these solvents compared to water.

The early picosecond time scale excited-state dynamics of the paradigm tris(2,2'-bipyridyl)Ruthenium(II) ([Ru(bpy)(3)](2+)) and related complexes have been examined by picosecond Kerr-gated time-resolved resonance Raman (ps-TR3) spectroscopy. The evolution of the signature Raman bands of the lowest thermally equilibrated excited(THEXI) state under two-color pump/probe conditions show that this state is not fully populated within several hundred femtoseconds as proposed previously but rather only within the first 20 ps following excitation. In addition to an emission observed within the instrument rise time (tau

The photophysical properties of stacked G-tetrads in diverse systems, including concentrated solutions of 5'-guanosine monophosphate (5'-GMP), polyguanylic acid (poly(G)) and the G-rich oligodeoxynucleotide sequence characteristic of human telomeric DNA, are probed by ps-TRIR and compared to those of the monomeric 5'-GMP.

We have prepared a coherent superposition of the two components of a Fermi resonance in the S1 state of toluene at approximately 460 cm(-1) with a approximately 1 ps laser pulse and monitored time-resolved photoelectron velocity-map images. The photoelectron intensities oscillate with time in a manner that depends on their kinetic energy, even though full vibrational resolution in the cation is not achieved. Analysis of the time-dependent photoelectron spectra enables information on the composition of the S1 wavepacket to be deduced. Such an experiment, in which a whole set of partially dispersed cation vibrational states are detected simultaneously, suggests an efficient method of studying intramolecular vibrational energy redistribution processes in excited states.

The fluorescence photocycle of the green fluorescent protein is functionally dependent on the specific structural protein environment. A direct relationship between equilibrium protein side-chain conformation of glutamate 222 and reactivity is established, particularly the rate of ultrafast proton transfer reactions in the fluorescence photocycle. We show that parallel transformations in the photocycle have a structural origin, and we report on the vibrational properties of responsive amino acids on an ultrafast timescale. Blue excitation of GFP drives two parallel, excited-state deuteron transfer reactions with 10 ps and 75 ps time constants to the buried carboxylic acid side chain of glutamate 222 via a hydrogen-bonding network. Assignment of 1456 cm(-1) and 1441 cm(-1) modes to nu(sym) and assignment of 1564 cm(-1) and 1570 cm(-1) features to nu(asym) of E222 in the 10 ps and 75 ps components, respectively, was possible from the analysis of the transient absorption data of an E222D mutant and was consistent with photoselection measurements. In contrast to the wild-type, measurements of E222D can be described with only one difference spectrum, with the nu(sym) mode at 1435 cm(-1) and the nu(asym) mode at 1567 cm(-1), also correlating a large Deltanu(asym-sym) with slow excited-state proton transfer kinetics. Density Functional Theory calculations and published model compound and theoretical studies relate differences in Deltanu(asym-sym) to the strength and number of hydrogen-bonding interactions that are detected via equilibrium geometry and COO- stretching frequency differences of the carboxylate. The correlation of photocycle kinetics with side-chain conformation of the acceptor suggests that proton transfer from S205 to E222 controls the rate of the overall excited-state proton transfer process, which is consistent with recent theoretical predictions. Photoselection measurements show agreement for localized C=O vibrations of chromophore, Q69, and E222 with Density Functional Theory and ab initio calculations placed in the x-ray geometry and provide their vibrational response in the intermediates in the photocycle.