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A data-constrained state estimate of the southern California Current System (CCS) is presented and compared with withheld California Cooperative Oceanic Fisheries Investigations (CalCOFI) data and assimilated glider data over 2007–17. The objective of this comparison is to assess the ability of the California State Estimate (CASE) to reproduce the key physical features of the CCS mean state, annual cycles, and interannual variability along the three sections of the California Underwater Glider Network (CUGN). The assessment focuses on several oceanic metrics deemed most important for characterizing physical variability in the CCS: 50-m potential temperature, 80-m salinity, and 26 kg m−3 isopycnal depth and salinity. In the time mean, the CASE reproduces large-scale thermohaline and circulation structures, including observed temperature gradients, shoaling isopycnals, and the locations and magnitudes of the equatorward California Current and poleward California Undercurrent. With respect to the annual cycle, the CASE captures the phase and, to a lesser extent, the magnitude of upper-ocean warming and stratification from late summer to early fall and of isopycnal heave during springtime upwelling. The CASE also realistically captures near-surface diapycnal mixing during upwelling season and the semiannual cycle of the California Undercurrent. In terms of interannual variability, the most pronounced signals are the persistent warming and downwelling anomalies of 2014–16 and a positive isopycnal salinity anomaly that peaked with the 2015–16 El Niño.

Autonomous underwater gliders offer the possibility of sustained observation of the coastal ocean. Since 2006 Spray underwater gliders in the California Underwater Glider Network (CUGN) have surveyed along California Cooperative Oceanic Fisheries Investigations (CalCOFI) lines 66.7, 80.0, and 90.0, constituting the world’s longest sustained glider network, to our knowledge. In this network, gliders dive between the surface and 500 m, completing a cycle in 3 h and covering 3 km in that time. Sections extend 350–500 km offshore and take 2–3 weeks to occupy. Measured variables include pressure, temperature, salinity, and depth-average velocity. The CUGN has amassed over 10,000 glider-days, covering over 210,000 km with over 95,000 dives. These data are used to produce a climatology whose products are for each variable a mean field, an annual cycle, and the anomaly from the annual cycle. The analysis includes a weighted least-squares fit to derive the mean and annual cycle, and an objective map to produce the anomaly. The final results are variables on rectangular grids in depth, distance offshore, and time. The mean fields are finely resolved sections across the main flows in the California Current System, including the poleward California Undercurrent and the equatorward California Current. The annual cycle shows a phase change from the surface to the thermocline, reflecting the effects of air/sea fluxes at the surface and upwelling in the thermocline. The interannual anomalies are examined with an emphasis on climate events of the last ten years including the 2009–2010 El Nino, the 2010–2011 La Nina, the warm anomaly of 2014–2015, and the 2015–2016 El Nino.

The 2015–2016 El Nino is by some measures one of the strongest on record, comparable to the 1982–1983 and 1997–1998 events that triggered widespread ecosystem change in the northeast Pacific. Here we describe impacts of the 2015–2016 El Nino on the California Current System (CCS) and place them in historical context using a regional ocean model and underwater glider observations. Impacts on the physical state of the CCS are weaker than expected based on tropical sea surface temperature anomalies; temperature and density fields reflect persistence of multiyear anomalies more than El Nino. While we anticipate El Nino-related impacts on spring/summer 2016 productivity to be similarly weak, their combination with preexisting anomalous conditions likely means continued low phytoplankton biomass. This study highlights the need for regional metrics of El Nino's effects and demonstrates the potential to assess these effects before the upwelling season, when altered ecosystem functioning is most apparent.

Large-scale patterns of positive temperature anomalies persisted throughout the surface waters of the North Pacific Ocean during 2014–2015. In the Southern California Current System, measurements by our sustained network of underwater gliders reveal the coastal effects of the recent warming. Regional upper ocean temperature anomalies were greatest since the initiation of the glider network in 2006. Additional observed physical anomalies included a depressed thermocline, high stratification, and freshening; induced biological consequences included changes in the vertical distribution of chlorophyll fluorescence. Contemporaneous surface heat flux and wind strength perturbations suggest that local anomalous atmospheric forcing caused the unusual oceanic conditions.