96 results on '"Kathleen Wood"'
Search Results
2. P581: Multiple mitochondrial DNA deletions in patients with myopathy
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Jing Wang, Ada Chan, James Peterson, Kathleen Wood, Maria Alejandra Diaz-Miranda, Archana Tara, Amy Goldstein, Zarazuela Zolkipli-Cunningham, Elizabeth M. McCormick, Colleen Muraresku, Matthew Dulik, Douglas Wallace, and Marni Falk
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Genetics ,QH426-470 ,Medicine - Published
- 2023
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3. Elucidation of the mechanism of subunit exchange in αB crystallin oligomers
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Rintaro Inoue, Yusuke Sakamaki, Takumi Takata, Kathleen Wood, Ken Morishima, Nobuhiro Sato, Aya Okuda, Masahiro Shimizu, Reiko Urade, Noriko Fujii, and Masaaki Sugiyama
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Medicine ,Science - Abstract
Abstract AlphaB crystallin (αB-crystallin) is a key protein for maintaining the long-term transparency of the eye lens. In the eye lens, αB-crystallin is a “dynamical” oligomer regulated by subunit exchange between the oligomers. To elucidate the unsettled mechanism of subunit exchange in αB-crystallin oligomers, the study was carried out at two different protein concentrations, 28.5 mg/mL (dense sample) and 0.45 mg/mL (dilute sample), through inverse contrast matching small-angle neutron scattering. Interestingly, the exchange rate of the dense sample was the same as that of the dilute sample. From analytical ultracentrifuge measurements, the coexistence of small molecular weight components and oligomers was detected, regardless of the protein concentration. The model proposed that subunit exchange could proceed through the assistance of monomers and other small oligomers; the key mechanism is attaching/detaching monomers and other small oligomers to/from oligomers. Moreover, this model successfully reproduced the experimental results for both dense and dilute solutions. It is concluded that the monomer and other small oligomers attaching/detaching mainly regulates the subunit exchange in αB-crystallin oligomer.
- Published
- 2021
- Full Text
- View/download PDF
4. The Kinetics of Aragonite Formation from Solution via Amorphous Calcium Carbonate
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Simon M. Clark, Vili Grigorova, Bruno Colas, Tamim A. Darwish, Kathleen Wood, Joerg Neuefeind, and Dorrit E. Jacob
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neutron scattering ,X-ray diffraction ,Small Angle Neutron Scattering ,Laser-Ablation Inductively Coupled Plasma Mass Spectrometry ,themo gravimetric analysis ,NOMAD ,Chemistry ,QD1-999 - Abstract
Magnesium doped Amorphous Calcium Carbonate was synthesised from precursor solutions containing varying amounts of calcium, magnesium, H2O and D2O. The Mg/Ca ratio in the resultant Amorphous Calcium Carbonate was found to vary linearly with the Mg/Ca ratio in the precursor solution. All samples crystallised as aragonite. No Mg was found in the final aragonite crystals. Changes in the Mg to Ca ratio were found to only marginally effect nucleation rates but strongly effect crystal growth rates. These results are consistent with a dissolution-reprecipitation model for aragonite formation via an Amorphous Calcium Carbonate intermediate.
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- 2022
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5. Mesoporous metallic rhodium nanoparticles
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Bo Jiang, Cuiling Li, Ömer Dag, Hideki Abe, Toshiaki Takei, Tsubasa Imai, Md. Shahriar A. Hossain, Md. Tofazzal Islam, Kathleen Wood, Joel Henzie, and Yusuke Yamauchi
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Science - Abstract
Mesoporous noble metal nanostructures offer great promise in catalytic applications. Here, Yamauchi and co-workers synthesize mesoporous rhodium nanoparticles using polymeric micelle templates, and report appreciable activities for methanol oxidation and NO remediation.
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- 2017
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6. Defining the 'C' in Community Supported Agriculture
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Jennifer M. Haney, Michael D. Ferguson, Elyzabeth W. Engle, Kathleen Wood, Kyle Olcott, A. E. Luloff, and James C. Finley
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Civic Agriculture ,Community ,Community Supported Agriculture ,CSA ,Satisfaction ,Agriculture ,Human settlements. Communities ,HT51-65 - Abstract
Localized agriculture is theorized to provide socio-environmental benefits to the community while ensuring a livelihood for local farmers. Much of the food systems literature refers to such an arrangement as civic agriculture, which is characterized as promoting community development by strengthening social ties among the various nodes of the localized food system. However, there is little literature that identifies the attributes of community and the specific mechanisms through which community qualities are produced, modeled, or replicated. This study's goal is to identify the meaning of community as used in the phrase "community supported agriculture" (CSA) by asking members and operators of local CSAs how they define community within the context of their membership. On-site interviews were conducted at the produce pick-up locations of four CSA farms in central Pennsylvania, resulting in a convenience sample of 97 CSA members and four operators. The survey instrument utilized open and closed-ended questions to collect information on farmer and member perceptions of their CSA community, motivations to join, and satisfaction with their experiences. The results suggest respondents are highly satisfied with products and services provided through their CSA. However, there are statistically significant differences in satisfaction scores across the four sampled farms. These differences support findings drawn from the open-ended questions indicating these CSA farms varied in member-defined attributes of a CSA community. Farm management practices, level of personal interactions, and other factors appear to have significant effects on CSA members' perception of community.
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- 2016
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7. Unusual phosphatidylcholine lipid phase behavior in the ionic liquid ethylammonium nitrate
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Livia Salvati Manni, Caitlin Davies, Kathleen Wood, Salvatore Assenza, Rob Atkin, and Gregory G. Warr
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Biomaterials ,Colloid and Surface Chemistry ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Published
- 2023
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8. Factors Influencing the Biodegradability of Agro-biopolymer Based Slow or Controlled Release Fertilizer
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Afrinal Firmanda, Farah Fahma, Khaswar Syamsu, Yessie Widya Sari, Lisman Suryanegara, Kathleen Wood, and Yukie Saito
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Environmental Engineering ,Polymers and Plastics ,Materials Chemistry - Published
- 2022
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9. Controlled/slow‐release fertilizer based on cellulose composite and its impact on sustainable agriculture: review
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Afrinal Firmanda, Farah Fahma, Khaswar Syamsu, Lisman Suryanegara, and Kathleen Wood
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Renewable Energy, Sustainability and the Environment ,Bioengineering - Published
- 2022
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10. Ionic group-dependent structure of complex coacervate hydrogels formed by ABA triblock copolymers
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Seyoung Kim, Jung-Min Kim, Kathleen Wood, and Soo-Hyung Choi
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General Chemistry ,Condensed Matter Physics - Abstract
We investigated the effect of ion pairs on the structure of complex coacervate core hydrogels (C3Gs) using small-angle X-ray/neutron scattering. The ratio between ammonium and guanidinium groups modulates both structure and salt-responsiveness of C3Gs as stimuli-responsive materials.
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- 2022
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11. Assessing tongue samples from mortalities as additional PRRSV and IAV-S surveillance on protected nursery and finishing sites
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Dylan Wulfekuhle, Kathleen Wood, Jeff Okones, Gustavo Silva, and Marjorie Schleper
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- 2023
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12. Solute Clustering During Natural Ageing in Al-Cu-(Sc)-(Zr) Alloys
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Lu Jiang, Kathleen Wood, Anna Sokolova, Robert Knott, Timothy Langan, and Thomas Dorin
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- 2023
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13. Technical considerations for small-angle neutron scattering from biological macromolecules in solution: Cross sections, contrasts, instrument setup and measurement
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Zuzanna, Pietras, Kathleen, Wood, Andrew E, Whitten, and Cy M, Jeffries
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Neutrons ,Neutron Diffraction ,Macromolecular Substances ,Scattering, Small Angle ,Hydrogen - Abstract
Small angle scattering affords an approach to evaluate the structure of dilute populations of macromolecules in solution where the measured scattering intensities relate to the distribution of scattering-pair distances within each macromolecule. When small angle neutron scattering (SANS) with contrast variation is employed, additional structural information can be obtained regarding the internal organization of biomacromolecule complexes and assemblies. The technique allows for the components of assemblies to be selectively 'matched in' and 'matched out' of the scattering profiles due to the different ways the isotopes of hydrogen-protium
- Published
- 2022
14. A round-robin approach provides a detailed assessment of biomolecular small-angle scattering data reproducibility and yields consensus curves for benchmarking
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Jill Trewhella, Patrice Vachette, Jan Bierma, Clement Blanchet, Emre Brookes, Srinivas Chakravarthy, Leonie Chatzimagas, Thomas E. Cleveland, Nathan Cowieson, Ben Crossett, Anthony P. Duff, Daniel Franke, Frank Gabel, Richard E. Gillilan, Melissa Graewert, Alexander Grishaev, J. Mitchell Guss, Michal Hammel, Jesse Hopkins, Qingqui Huang, Jochen S. Hub, Greg L. Hura, Thomas C. Irving, Cy Michael Jeffries, Cheol Jeong, Nigel Kirby, Susan Krueger, Anne Martel, Tsutomu Matsui, Na Li, Javier Pérez, Lionel Porcar, Thierry Prangé, Ivan Rajkovic, Mattia Rocco, Daniel J. Rosenberg, Timothy M. Ryan, Soenke Seifert, Hiroshi Sekiguchi, Dmitri Svergun, Susana Teixeira, Aurelien Thureau, Thomas M. Weiss, Andrew E. Whitten, Kathleen Wood, and Xiaobing Zuo
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Benchmarking ,Consensus ,X-Ray Diffraction ,Structural Biology ,Scattering, Small Angle ,Solvents ,Reproducibility of Results ,Proteins ,ddc:530 - Abstract
Acta crystallographica / Section D 78(11), 1315 - 1336 (2022). doi:10.1107/S2059798322009184, Through an expansive international effort that involved data collection on 12 small-angle X-ray scattering (SAXS) and four small-angle neutron scattering (SANS) instruments, 171 SAXS and 76 SANS measurements for five proteins (ribonuclease A, lysozyme, xylanase, urate oxidase and xylose isomerase) were acquired. From these data, the solvent-subtracted protein scattering profiles were shown to be reproducible, with the caveat that an additive constant adjustment was required to account for small errors in solvent subtraction. Further, the major features of the obtained consensus SAXS data over the q measurement range 0$^{–1}$ Å$^{–1}$ are consistent with theoretical prediction. The inherently lower statistical precision for SANS limited the reliably measured q-range to 2.2 Å$^{–1}$ showed good mutual agreement, affirming that this region has interpretable features for structural modelling. SAS measurements with inline size-exclusion chromatography (SEC) proved to be generally superior for eliminating sample heterogeneity, but with unavoidable sample dilution during column elution, while batch SAS data collected at higher concentrations and for longer times provided superior statistical precision. Careful merging of data measured using inline SEC and batch modes, or low- and high-concentration data from batch measurements, was successful in eliminating small amounts of aggregate or interparticle interference from the scattering while providing improved statistical precision overall for the benchmarking data set., Published by Wiley, Bognor Regis
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- 2022
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15. First electrochemical synthesis of mesoporous RhNi alloy films for an alkali-mediated hydrogen evolution reaction
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Andrew E. Whitten, Joel Henzie, Jongbeom Na, Hyunsoo Lim, Anya J.E. Yago, Kathleen Wood, Yusuke Yamauchi, Kenya Kani, and Md. Shahriar A. Hossain
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Tafel equation ,Materials science ,Renewable Energy, Sustainability and the Environment ,Alloy ,02 engineering and technology ,General Chemistry ,Overpotential ,engineering.material ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Electrocatalyst ,Electrochemistry ,01 natural sciences ,Redox ,0104 chemical sciences ,Metal ,Chemical engineering ,visual_art ,visual_art.visual_art_medium ,engineering ,General Materials Science ,0210 nano-technology ,Mesoporous material - Abstract
Synthesizing mesoporous alloys composed of metals with divergent reactivities and standard redox potentials (E0) is challenging because the kinetics of metal deposition is totally different. Herein, we report the first method to generate mesoporous RhNi alloy films via electrochemical co-deposition using self-assembled micelle templates. The concentration of Rh precursor (Rh3+) is crucial to control reaction kinetics and morphology because Rh deposition is the trigger of Ni co-deposition. The ratio of Rh3+ : Ni2+ (in the precursor) can be altered to generate different alloy compositions, and the impact of pH and deposition potentials is also investigated. We examine the mesoporous RhNi films as electrocatalytic electrodes for the hydrogen evolution reaction (HER). Ni-doping serves to enhance the HER performance of the mesoporous films, and the 1 : 1 alloy (mesoporous Rh49Ni51 film) shows the best performance with the overpotential of 59 mV @ 10 mA cm−2 and Tafel slope of 67 mV dec−1. The insight gained here will enable researchers to experiment with different noble-transition metal alloys to generate better porous electrodes for electrocatalysis.
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- 2021
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16. Phosphorus- and Nitrogen-Doped Carbon Nanosheets Constructed with Monolayered Mesoporous Architectures
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Jing Tang, Jiacheng Zhao, Haibo Tan, Xingtao Xu, Wei Xia, Yingji Zhao, Kathleen Wood, Yoshiyuki Sugahara, and Yusuke Yamauchi
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Materials science ,Graphene ,General Chemical Engineering ,Phosphorus ,Oxide ,chemistry.chemical_element ,Substrate (chemistry) ,Nitrogen doped ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,3. Good health ,0104 chemical sciences ,law.invention ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,law ,Materials Chemistry ,Copolymer ,0210 nano-technology ,Mesoporous material ,Carbon - Abstract
Two-dimensional (2D) sandwich-structured phosphorus- and nitrogen-doped mesoporous carbon nanosheets have been synthesized by using graphene oxide (GO) as the substrate, triblock copolymer F127 mic...
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- 2020
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17. Decagram scale production of deuterated mineral oil and polydecene as solvents for polymer studies in neutron scattering
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Tamim A. Darwish, Marina Cagnes, Kazuki Mita, Mizuki Kishimoto, Mitchell A. Klenner, and Kathleen Wood
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chemistry.chemical_classification ,Materials science ,Polymers and Plastics ,Organic Chemistry ,Analytical chemistry ,Theta solvent ,Bioengineering ,Polymer ,Polyethylene ,Neutron scattering ,Biochemistry ,Small-angle neutron scattering ,Solvent ,chemistry.chemical_compound ,chemistry ,Deuterium ,medicine ,Mineral oil ,medicine.drug - Abstract
Decagram scale syntheses of deuterated mineral oil (d-MO) and poly(1-decene) (d-PD) were achieved by direct catalytic hydrothermal H/D exchange reaction in D2O. Nuclear magnetic resonance (NMR), mass density and small angle neutron scattering (SANS) analyses collectively revealed deuteration ratios of 54 ± 12% and 88 ± 4% for d-MO and d-PD, respectively. Further SANS analyses of polyethylene (PE) dissolved in d-MO revealed that the oil behaved as a theta solvent at temperatures of 100 and 120 °C, based on assessments of the radii of gyration and mass-fractal dimensions in the PE coils. These results suggest that PE chains in d-MO likely adopt the same coiled molecular conformations as those reported for PE in the molten state. This approach of deuterating the oil solvent, in lieu of the polymer analyte, may have far reaching applications for the SANS assessments of oil additives in polymer materials. Additionally, such deuterated oils are expected to exhibit improved stability and oxidative resistance, which will benefit many applications given the ubiquitous use of mineral oil in industry.
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- 2020
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18. Investigation of vesicular lesions in pigs with unknown causative agents
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Ethan Aljets, Haiyan Huang, Ganwu Li, Pablo Piñeyro, Kathleen Wood, Laura Bradner, Chris Rademacher, Phillip Gauger, Rodger Main, and Jianqiang Zhang
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- 2022
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19. I see blisters, now what? A swine practitioner’s perspective on foreign animal disease investigations
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Kathleen Wood
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- 2022
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20. Polycation radius of gyration in a polymeric ionic liquid (PIL): the PIL melt is not a theta solvent
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Lucas N. Wong, Seamus D. Jones, Kathleen Wood, Liliana de Campo, Tamim Darwish, Michael Moir, Hua Li, Rachel A. Segalman, Gregory G. Warr, and Rob Atkin
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General Physics and Astronomy ,Physical and Theoretical Chemistry - Abstract
The conformation of the polycation in the prototypical polymeric ionic liquid (PIL) poly(3-methyl-1-aminopropylimidazolylacrylamide) bis(trifluoromethylsulfonyl)imide (poly(3MAPIm)TFSI) was probed using small-angle neutron scattering (SANS) and ultra-small-angle neutron scattering (USANS) at 25 °C and 80 °C. Poly(3MAPIm)TFSI contains microvoids which lead to intense low
- Published
- 2022
21. Production and characterisation of modularly deuterated UBE2D1-Ub conjugate by small angle neutron and X-ray scattering
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Zuzanna Pietras, Anthony P. Duff, Vivian Morad, Kathleen Wood, Cy M. Jeffries, and Maria Sunnerhagen
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Models, Molecular ,Neutrons ,Ubiquitin ,X-Rays ,Ubiquitin-Conjugating Enzymes ,Scattering, Small Angle ,Biophysics ,General Medicine ,Protein conjugation ,Protein deuteration ,Small angle neutron scattering ,Small angle X-ray scattering ,Ubiquitination ,Biofysik - Abstract
This structural study exploits the possibility to use modular protein deuteration to facilitate the study of ubiquitin signalling, transfer, and modification. A protein conjugation reaction is used to combine protonated E2 enzyme with deuterated ubiquitin for small angle X-ray and neutron scattering with neutron contrast variation. The combined biomolecules stay as a monodisperse system during data collection in both protonated and deuterated buffers indicating long stability of the E2-Ub conjugate. With multiphase ab initio shape restoration and rigid body modelling, we reconstructed the shape of a E2-Ub-conjugated complex of UBE2D1 linked to ubiquitin via an isopeptide bond. Solution X-ray and neutron scattering data for this E2-Ub conjugate in the absence of E3 jointly indicate an ensemble of open and backbent states, with a preference for the latter in solution. The approach of combining protonated and labelled proteins can be used for solution studies to assess localization and movement of ubiquitin and could be widely applied to modular Ub systems in general. Funding Agencies|Swedish Foundation for Strategic Research within the national graduate school SwedNess [GSn15-0008]; Swedish Research Council (VR) [2018-04392]; Linkoping University
- Published
- 2022
22. Enhanced Precipitation Kinetics in Non-Stretched Al-Cu-Li-Mg-Ag-(Sc)-(Zr) Alloys
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Lu Jiang, Katrin Mester, Robert Knott, Kathleen Wood, Anna Sokolova, Timothy Langan, Matthew Barnett, and Thomas Dorin
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History ,Polymers and Plastics ,Mechanics of Materials ,Mechanical Engineering ,Metals and Alloys ,General Materials Science ,Business and International Management ,Condensed Matter Physics ,Industrial and Manufacturing Engineering - Published
- 2022
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23. Small-Angle Neutron Scattering of Liposomes: Sample Preparation to Simple Modeling
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Kathleen, Wood
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Neutrons ,Neutron Diffraction ,Lipid Bilayers ,Liposomes ,Scattering, Small Angle ,Scattering, Radiation - Abstract
Small-angle scattering (SAS) is a technique commonly used in the soft matter sciences to characterize the structure of molecules self-assembling in solution. As such, it is suitable to study preparations of homogeneous liposomes to extract simple structural parameters such as radius and lipid bilayer thickness in solution. Here, we describe the preparation of liposomes for small-angle neutron scattering via extrusion and present the simplest way the resulting data can be modeled.
- Published
- 2021
24. Small-Angle Neutron Scattering of Liposomes: Sample Preparation to Simple Modeling
- Author
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Kathleen Wood
- Subjects
Physics::Biological Physics ,Liposome ,Materials science ,Scattering ,Sample preparation ,Soft matter ,Physics::Chemical Physics ,Neutron scattering ,Small-angle scattering ,Lipid bilayer ,Molecular physics ,Small-angle neutron scattering - Abstract
Small-angle scattering (SAS) is a technique commonly used in the soft matter sciences to characterize the structure of molecules self-assembling in solution. As such, it is suitable to study preparations of homogeneous liposomes to extract simple structural parameters such as radius and lipid bilayer thickness in solution. Here, we describe the preparation of liposomes for small-angle neutron scattering via extrusion and present the simplest way the resulting data can be modeled.
- Published
- 2021
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25. eP313: Too few or too many? Variant reporting burden and diagnostic comparisons of an extensive gene panel with exome-sequencing in immunodeficiency
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Erfan Aref-Eshghi, Kajia Cao, Weixuan Fu, Kathleen Wood, Nancy Spinner, Matthew Dulik, Laura Conlin, Jing Wang, and Minjie Luo
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Genetics (clinical) - Published
- 2022
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26. Nanoarchitectured peroxidase-mimetic nanozymes: mesoporous nanocrystalline α- or γ-iron oxide?
- Author
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Nam-Trung Nguyen, Parasuraman Selvam, Motasim Billah, Jeonghun Kim, Yusuf Valentino Kaneti, Mostafa Kamal Masud, Abdulmohsen Ali Alshehri, Yusuke Yamauchi, Yousef Gamaan Alghamidi, Kathleen Wood, Shahriar A. Hossain, Mohammad J.A. Shiddiky, Rajesh Kumar Parsapur, Khalid Ahmed Alzahrani, and Murugulla Adharvanachari
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Biomedical Engineering ,Iron oxide ,Nanoparticle ,Nanotechnology ,Biosensing Techniques ,02 engineering and technology ,010402 general chemistry ,Ferric Compounds ,01 natural sciences ,chemistry.chemical_compound ,Biomimetics ,General Materials Science ,Detection limit ,biology ,Chemistry ,Chromogenic ,General Chemistry ,General Medicine ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Glucose ,Catalytic oxidation ,biology.protein ,Nanoparticles ,0210 nano-technology ,Mesoporous material ,Oxidation-Reduction ,Biosensor ,Peroxidase - Abstract
Nanozymes (nanoparticles with enzyme-like properties) have attracted considerable attention in recent years owing to their intrinsic enzyme-like properties and broad application in the fields of ELISA based immunoassay and biosensing. Herein, we systematically investigate the influence of crystal phases (γ-Fe2O3 and α-Fe2O3) of mesoporous iron oxide (IO) on their peroxidase mimetic activity. In addition, we have also demonstrated the applicability of these mesoporous IOs as nanozymes for detecting the glucose biomarker with a limit of detection (LOD) of 0.9 μM. Mesoporous γ-Fe2O3 shows high nanozyme activities (and magnetism) toward the catalytic oxidation of chromogenic substances, such as 3,3',5,5'-tetramethylbenzidine (TMB) and 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid)-ABTS, as well as for the colourimetric detection of glucose, compared to that of α-Fe2O3. We believe that this in-depth study of crystal structure based nanozyme activity will guide designing highly effective nanozymes based on iron oxide nanostructures for chemical sensing, biosensing and environmental remediation.
- Published
- 2019
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27. Elucidation of the mechanism of subunit exchange in αB crystallin oligomers
- Author
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Reiko Urade, Nobuhiro Sato, Masaaki Sugiyama, Takumi Takata, Yusuke Sakamaki, Noriko Fujii, Kathleen Wood, Ken Morishima, Aya Okuda, Rintaro Inoue, and Masahiro Shimizu
- Subjects
0301 basic medicine ,Science ,Protein subunit ,Biophysics ,Neutron scattering ,Oligomer ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Alphab crystallin ,Eye lens ,Multidisciplinary ,αb crystallin ,Biological techniques ,eye diseases ,030104 developmental biology ,Monomer ,chemistry ,Medicine ,sense organs ,Ultracentrifuge ,030217 neurology & neurosurgery - Abstract
AlphaB crystallin (αB-crystallin) is a key protein for maintaining the long-term transparency of the eye lens. In the eye lens, αB-crystallin is a “dynamical” oligomer regulated by subunit exchange between the oligomers. To elucidate the unsettled mechanism of subunit exchange in αB-crystallin oligomers, the study was carried out at two different protein concentrations, 28.5 mg/mL (dense sample) and 0.45 mg/mL (dilute sample), through inverse contrast matching small-angle neutron scattering. Interestingly, the exchange rate of the dense sample was the same as that of the dilute sample. From analytical ultracentrifuge measurements, the coexistence of small molecular weight components and oligomers was detected, regardless of the protein concentration. The model proposed that subunit exchange could proceed through the assistance of monomers and other small oligomers; the key mechanism is attaching/detaching monomers and other small oligomers to/from oligomers. Moreover, this model successfully reproduced the experimental results for both dense and dilute solutions. It is concluded that the monomer and other small oligomers attaching/detaching mainly regulates the subunit exchange in αB-crystallin oligomer.
- Published
- 2021
- Full Text
- View/download PDF
28. De Novo Variants in CNOT1, a Central Component of the CCR4-NOT Complex Involved in Gene Expression and RNA and Protein Stability, Cause Neurodevelopmental Delay
- Author
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Paul Kruszka, Sreehari Kalvakuri, Austin Larson, Dong Li, Inge van Outersterp, Florence Demurger, Ian Hayes, F. Lucy Raymond, Lauren J. Massingham, Claudia A. L. Ruivenkamp, Ian D. Krantz, Kendra Brunet, Nicole Revencu, Maaike Vreeburg, Donatella Milani, Tjitske Kleefstra, Lisenka E.L.M. Vissers, Maximilian Muenke, Sinje Geuer, Candace Gamble, Rolf Bodmer, Hanka Venselaar, Elke de Boer, Sarina G. Kant, Dilys Weijers, Arjan P.M. de Brouwer, Machteld M. Oud, Maria Iascone, Christopher C. Griffith, Frédéric Tran Mau-Them, Karin Weiss, Megan T. Cho, Ayesha Ahmad, James A. Bartley, Nina Powell Hamilton, Lenika De Simone, George E. Hoganson, Lucie Evenepoel, Simone Kersten, Daniel L. Polla, Himanshu Goel, Antonio Vitobello, Rachel Fisher, Arthur Sorlin, Sébastien Moutton, Myrthe van den Born, Hilary J. Vernon, Michael Kwint, Kaitlyn Burns, Anna Ruiz, Kirsty McWalter, Jenny Morton, Jennifer Schwab, Elizabeth J. Bhoj, Philippe Christophe, Hans van Bokhoven, Elisabeth Gabau, Kimberly M. Nugent, Jill R. Murrell, Thierry Billette de Villemeur, Kathleen Wood, Alexandra Afenjar, Amber Begtrup, Chanika Phornphutkul, Sarah E. Raible, Melde Witmond, Perrine Charles, Claudia Soler-Alfonso, D. Isum Ward, Marjolaine Willems, Boris Keren, Julian Delanne, UCL - SSS/IREC/SLUC - Pôle St.-Luc, UCL - (SLuc) Centre de génétique médicale UCL, Clinical Genetics, Klinische Genetica, RS: GROW - R4 - Reproductive and Perinatal Medicine, and MUMC+: DA KG Polikliniek (9)
- Subjects
Male ,DYRK1A ,Developmental Disabilities ,lnfectious Diseases and Global Health Radboud Institute for Molecular Life Sciences [Radboudumc 4] ,Gene Expression ,de novo mutations ,Haploinsufficiency ,0302 clinical medicine ,Gene expression ,Nuclear Receptor Subfamily 4, Group A, Member 2 ,Genetics (clinical) ,Genetics ,0303 health sciences ,Gene knockdown ,repressor ,neurodevelopment ,Protein Stability ,CCR4-NOT complex ,Phenotype ,developmental delay ,intellectual disability ,Drosophila ,deadenylase complex ,Female ,regulators ,Heterozygote ,Receptors, CCR4 ,Biology ,Nervous System Malformations ,03 medical and health sciences ,Report ,genomics ,Humans ,Gene ,Alleles ,030304 developmental biology ,Neurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7] ,Genetic Variation ,Protein ubiquitination ,Renal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11] ,Neurodevelopmental Disorders ,SUBUNIT ,RNA ,CNOT1 ,Nanomedicine Radboud Institute for Molecular Life Sciences [Radboudumc 19] ,exome sequencing ,030217 neurology & neurosurgery ,Transcription Factors - Abstract
Contains fulltext : 220423.pdf (Publisher’s version ) (Closed access) CNOT1 is a member of the CCR4-NOT complex, which is a master regulator, orchestrating gene expression, RNA deadenylation, and protein ubiquitination. We report on 39 individuals with heterozygous de novo CNOT1 variants, including missense, splice site, and nonsense variants, who present with a clinical spectrum of intellectual disability, motor delay, speech delay, seizures, hypotonia, and behavioral problems. To link CNOT1 dysfunction to the neurodevelopmental phenotype observed, we generated variant-specific Drosophila models, which showed learning and memory defects upon CNOT1 knockdown. Introduction of human wild-type CNOT1 was able to rescue this phenotype, whereas mutants could not or only partially, supporting our hypothesis that CNOT1 impairment results in neurodevelopmental delay. Furthermore, the genetic interaction with autism-spectrum genes, such as ASH1L, DYRK1A, MED13, and SHANK3, was impaired in our Drosophila models. Molecular characterization of CNOT1 variants revealed normal CNOT1 expression levels, with both mutant and wild-type alleles expressed at similar levels. Analysis of protein-protein interactions with other members indicated that the CCR4-NOT complex remained intact. An integrated omics approach of patient-derived genomics and transcriptomics data suggested only minimal effects on endonucleolytic nonsense-mediated mRNA decay components, suggesting that de novo CNOT1 variants are likely haploinsufficient hypomorph or neomorph, rather than dominant negative. In summary, we provide strong evidence that de novo CNOT1 variants cause neurodevelopmental delay with a wide range of additional co-morbidities. Whereas the underlying pathophysiological mechanism warrants further analysis, our data demonstrate an essential and central role of the CCR4-NOT complex in human brain development.
- Published
- 2020
29. The effect of molybdenum on interphase precipitation at 700 °C in a strip-cast low-carbon niobium steel
- Author
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Nicole Stanford, Peter Hodgson, Kathleen Wood, Ross K. W. Marceau, Lu Jiang, Thomas Dorin, Jiang, Lu, Marceau, Ross KW, Dorin, Thomas, Wood, Kathleen, Hodgson, Peter D, and Stanford, Nicole
- Subjects
Materials science ,Alloy ,Niobium ,Nucleation ,chemistry.chemical_element ,02 engineering and technology ,Atom probe ,engineering.material ,01 natural sciences ,law.invention ,law ,high strength ,0103 physical sciences ,General Materials Science ,Composite material ,010302 applied physics ,interphase molybdenum ,Precipitation (chemistry) ,Mechanical Engineering ,technology, industry, and agriculture ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,chemistry ,Mechanics of Materials ,Molybdenum ,Volume fraction ,engineering ,Interphase ,0210 nano-technology ,clustering - Abstract
The effect of Mo on the clustering and interphase precipitation occurring during phase transformation has been investigated in a strip-cast low-carbon steel containing Nb. In this work, isothermal coiling treatments were performed at 700 °C for various times to form interphase precipitates. Transmission electron microscopy (TEM), small-angle neutron scattering (SANS) and atom probe tomography (APT) results show that the addition of Mo increases the number density and volume fraction of clusters and interphase precipitates but has a negligible effect on their size, and overall provides for greater strengthening in the Mo-containing alloy. APT analysis shows that the interphase precipitates are composed of Nb, C and N in both alloys. The segregation of Mo is also observed in the interphase precipitates in the Mo-containing alloy, which is believed to relieve the lattice misfit between the precipitate and the matrix. It is proposed that the reduced lattice misfit allows for precipitate nucleation to occur more easily in the Mo-containing alloy Refereed/Peer-reviewed
- Published
- 2020
30. eP328: Establishing droplet digital PCR method for assessing mitochondrial DNA content in muscle
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Ada Chan, Kathleen Wood, Jorune Balciuniene, Juliana Troiani, Heather Pearce, and Jing Wang
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Genetics (clinical) - Published
- 2022
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31. Mesoporous Metallic Iridium Nanosheets
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Bo Jiang, Yusuke Yamauchi, Kenya Kani, Joel Henzie, Alan E. Rowan, Andrew E. Whitten, Kathleen Wood, Yanna Guo, and Jeonghun Kim
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Nanostructure ,chemistry.chemical_element ,Nanotechnology ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,Metal ,Colloid and Surface Chemistry ,Thermal transport ,chemistry ,visual_art ,visual_art.visual_art_medium ,Iridium ,0210 nano-technology ,Mesoporous material - Abstract
Two-dimensional (2D) metals are an emerging class of nanostructures that have attracted enormous research interest due to their unusual electronic and thermal transport properties. Adding mesopores in the plane of ultrathin 2D metals is the next big step in manipulating these structures because increasing their surface area improves the utilization of the material and the availability of active sites. Here, we report a novel synthetic strategy to prepare an unprecedented type of 2D mesoporous metallic iridium (Ir) nanosheet. Mesoporous Ir nanosheets can be synthesized with close-packed assemblies of diblock copolymer (poly-(ethylene oxide)- b-polystyrene, PEO- b-PS) micelles aligned in the 2D plane of the nanosheets. This novel synthetic route opens a new dimension of control in the synthesis of 2D metals, enabling new kinds of mesoporous architectures with abundant catalytically active sites. Because of their unique structural features, the mesoporous metallic Ir nanosheets exhibit a high electrocatalytic activity toward the oxygen evolution reaction (OER) in acidic solution as compared to commercially available catalysts.
- Published
- 2018
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32. Atom probe tomography data analysis procedure for precipitate and cluster identification in a Ti-Mo steel
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Thomas Dorin, Peter Hodgson, Kathleen Wood, Sharmistha Dhara, Ross K. W. Marceau, and Ilana Timokhina
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010302 applied physics ,Multidisciplinary ,Materials science ,Field (physics) ,Materials Science ,Magnification ,02 engineering and technology ,Atom probe ,021001 nanoscience & nanotechnology ,lcsh:Computer applications to medicine. Medical informatics ,01 natural sciences ,Evaporation (deposition) ,Molecular physics ,Carbide ,law.invention ,Matrix (mathematics) ,law ,0103 physical sciences ,Mass spectrum ,Cluster (physics) ,lcsh:R858-859.7 ,0210 nano-technology ,lcsh:Science (General) ,lcsh:Q1-390 - Abstract
An atom probe tomography data analysis procedure for identification of particles in a Ti-Mo steel is presented. This procedure has been used to characterise both carbide precipitates (larger particles) and solute clusters (smaller particles), as reported in an accompanying Mater. Sci. Eng. A paper [1]. Particles were identified using the maximum separation method (cluster-finding algorithm) after resolving peak overlaps at several locations in the mass spectrum. The cluster-finding algorithm was applied to the data in a two-stage process to properly identify particles having a bimodal size distribution. Furthermore, possible misidentification of matrix atoms (mainly Fe) due to the local magnification effect (from the difference in field evaporation potential between the matrix and precipitates) has been resolved using an atomic density approach, comparing that measured experimentally using APT to the theoretical density of both the matrix and particles.
- Published
- 2018
33. QUOKKA, the pinhole small-angle neutron scattering instrument at the OPAL Research Reactor, Australia: design, performance, operation and scientific highlights
- Author
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David Federici, Shane J. Kennedy, Eno Imamovic, Friedl Bartsch, Robert A. Robinson, Christopher J. Garvey, Elliot P. Gilbert, Sungjoong Kim, Douglas Clowes, William A. Hamilton, John C. Osborn, Michael Deura, Peter Baxter, Terry Noakes, David Penny, Tony Lam, Nick Hauser, Kathleen Wood, Merv Perry, Chun-Ming Wu, Peter Abbeywick, Wai Tung Lee, Paolo Imperia, Jamie C. Schulz, Frank Darmann, Warren Brown, Norman Booth, Shane Harrison, Glen Horton, Stewart A Pullen, Norman Xiong, David Mannicke, Mark Lesha, Martin Jones, Jitendra P. Mata, Daniel Bartlett, Philip Hanson, Timothy D’Adam, Jason Christoforidis, Ferdi Franceschini, and Scott Olsen
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Neutron-velocity selector ,Computer science ,business.industry ,Detector ,Context (language use) ,02 engineering and technology ,Neutron scattering ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,0104 chemical sciences ,law.invention ,Lens (optics) ,law ,Neutron ,Pinhole (optics) ,Research reactor ,Aerospace engineering ,0210 nano-technology ,business - Abstract
QUOKKA is a 40 m pinhole small-angle neutron scattering instrument in routine user operation at the OPAL research reactor at the Australian Nuclear Science and Technology Organisation. Operating with a neutron velocity selector enabling variable wavelength, QUOKKA has an adjustable collimation system providing source–sample distances of up to 20 m. Following the large-area sample position, a two-dimensional 1 m2 position-sensitive detector measures neutrons scattered from the sample over a secondary flight path of up to 20 m. Also offering incident beam polarization and analysis capability as well as lens focusing optics, QUOKKA has been designed as a general purpose SANS instrument to conduct research across a broad range of scientific disciplines, from structural biology to magnetism. As it has recently generated its first 100 publications through serving the needs of the domestic and international user communities, it is timely to detail a description of its as-built design, performance and operation as well as its scientific highlights. Scientific examples presented here reflect the Australian context, as do the industrial applications, many combined with innovative and unique sample environments.
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- 2018
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34. Precipitation and clustering in a Ti-Mo steel investigated using atom probe tomography and small-angle neutron scattering
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Thomas Dorin, Sharmistha Dhara, Kathleen Wood, Ross K. W. Marceau, Ilana Timokhina, and Peter Hodgson
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010302 applied physics ,Materials science ,Precipitation (chemistry) ,Mechanical Engineering ,Analytical chemistry ,02 engineering and technology ,Atom probe ,engineering.material ,Neutron scattering ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Small-angle neutron scattering ,law.invention ,Carbide ,Mechanics of Materials ,law ,0103 physical sciences ,Volume fraction ,engineering ,General Materials Science ,Microalloyed steel ,0210 nano-technology ,Chemical composition - Abstract
The isothermal evolution of nanometre-sized precipitates formed in a Ti-Mo microalloyed steel through interphase precipitation has been investigated using atom probe tomography and small-angle neutron scattering. The coiling time and applied strain have been varied to observe the precipitate evolution at a constant coiling temperature of 650 °C, where various evolution parameters such as particle radius, number density, volume fraction and chemical composition have been evaluated and compared. The possibility of early stage solute clustering and its effect on precipitate formation have also been investigated. Clustering of Ti, Mo and C atoms as Ti-C and Mo-C has been observed at the shortest coiling time of 5 min. These clusters are assumed to be precursors to the carbide precipitates observed in the system, which exhibit a metastable composition, containing a carbon fraction (C/Ti+Mo ratio) in the range of 0.2–1. In particles having a Guinier radius > 3 nm, however, the average chemical composition approached the stable MC carbide stoichiometry with Ti/Mo ratio ~2.5 and C/(Ti+Mo) ratio ~0.55. This study reveals that the precipitate coarsening kinetics are very slow, with average particle diameter 10 h) in both the undeformed and deformed conditions. This is believed to be due to the reduction in equilibrium Ti content in the matrix as a result of partial replacement of Ti by Mo (Ti/Mo ratio > 2) in the precipitate lattice, in the presence of excess C in the system.
- Published
- 2018
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35. A tethered bilayer lipid membrane that mimics microbial membranes
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Jakob Andersson, Melanie A. Fuller, Kathleen Wood, Stephen A. Holt, and Ingo Köper
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Lipopolysaccharides ,Gram-negative bacteria ,Surface Properties ,Lipid Bilayers ,General Physics and Astronomy ,02 engineering and technology ,Electric Capacitance ,010402 general chemistry ,01 natural sciences ,Biomimetic Materials ,Scattering, Small Angle ,Monolayer ,Escherichia coli ,Physical and Theoretical Chemistry ,Lipid bilayer ,Chemical Physics ,biology ,Colistin ,Chemistry ,Bilayer ,Vesicle ,Cell Membrane ,021001 nanoscience & nanotechnology ,biology.organism_classification ,0104 chemical sciences ,Neutron Diffraction ,Membrane ,02 Physical Sciences, 03 Chemical Sciences, 09 Engineering ,Membrane protein ,Dielectric Spectroscopy ,Phosphatidylcholines ,Biophysics ,0210 nano-technology ,Bacterial outer membrane - Abstract
A model membrane system has been developed, which mimics the outer membrane of Gram negative bacteria. The structure is based on a tethered monolayer which has been fused with vesicles containing lipopolysaccharide molecules. The effect of the composition of the monolayer and the lipids in the outer layer on the structural and electrical properties of the membrane has been investigated. By using electrochemical impedance spectroscopy as well as neutron scattering techniques, it could be shown that a relatively high tethering density and a small amount of diluting lipids in the outer membrane leaflet leads to the formation of a stable solid supported membrane. The influence of divalent ions on the membrane stability has been probed as well as the interaction of the bilayer with the antibiotic colistin. A number of different architectures were developed, suited to both the study of bacterial membrane proteins and the screening of antimicrobial activity of potential drug candidates.
- Published
- 2018
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36. When Does Old Become Too Old?
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Kathleen Woodward
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Arts in general ,NX1-820 ,Language and Literature - Published
- 2024
37. Subunit dynamics in alpha-crystallin through deuteration-assisted small-angle neutron scattering
- Author
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Rintaro Inoue, Yusuke Sakamaki, Takumi Takata, Ken Morishima, Kathleen Wood, Nobuhiro Sato, Aya Okuda, Masahiro Shimizu, Reiko Urade, Noriko Fujii, and Masaaki Sugiyama
- Subjects
Inorganic Chemistry ,Structural Biology ,General Materials Science ,Physical and Theoretical Chemistry ,Condensed Matter Physics ,Biochemistry - Published
- 2021
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38. Mesoporous metallic rhodium nanoparticles
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Cuiling Li, Joel Henzie, Yusuke Yamauchi, Ömer Dag, Md. Tofazzal Islam, Toshiaki Takei, Hideki Abe, Tsubasa Imai, Kathleen Wood, Bo Jiang, and Md. Shahriar A. Hossain
- Subjects
Poly(methyl methacrylate) ,Reduction (chemistry) ,Surface area ,General Physics and Astronomy ,Nanoparticle ,02 engineering and technology ,01 natural sciences ,Synthesis ,Rrhodium ,Chemical analysis ,Multidisciplinary ,Porous medium ,021001 nanoscience & nanotechnology ,Mesoporous organosilica ,visual_art ,visual_art.visual_art_medium ,Noble metal ,0210 nano-technology ,Materials science ,Science ,chemistry.chemical_element ,engineering.material ,010402 general chemistry ,Article ,Catalysis ,General Biochemistry, Genetics and Molecular Biology ,Rhodium ,Metal ,Oxidation ,Thermal stability ,Reduction ,Methanol ,Crystal structure ,Nitric oxide ,General Chemistry ,Concentration (composition) ,0104 chemical sciences ,Oxygen ,Macrogol ,Chemical engineering ,chemistry ,Concentration (parameters) ,engineering ,Catalyst ,Thermostability ,Mesoporous material ,Controlled study - Abstract
Mesoporous noble metals are an emerging class of cutting-edge nanostructured catalysts due to their abundant exposed active sites and highly accessible surfaces. Although various noble metal (e.g. Pt, Pd and Au) structures have been synthesized by hard- and soft-templating methods, mesoporous rhodium (Rh) nanoparticles have never been generated via chemical reduction, in part due to the relatively high surface energy of rhodium (Rh) metal. Here we describe a simple, scalable route to generate mesoporous Rh by chemical reduction on polymeric micelle templates [poly(ethylene oxide)-b-poly(methyl methacrylate) (PEO-b-PMMA)]. The mesoporous Rh nanoparticles exhibited a ∼2.6 times enhancement for the electrocatalytic oxidation of methanol compared to commercially available Rh catalyst. Surprisingly, the high surface area mesoporous structure of the Rh catalyst was thermally stable up to 400 °C. The combination of high surface area and thermal stability also enables superior catalytic activity for the remediation of nitric oxide (NO) in lean-burn exhaust containing high concentrations of O2., Mesoporous noble metal nanostructures offer great promise in catalytic applications. Here, Yamauchi and co-workers synthesize mesoporous rhodium nanoparticles using polymeric micelle templates, and report appreciable activities for methanol oxidation and NO remediation.
- Published
- 2017
39. The Turks and Caicos Islands
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Kathleen Wood, Alan Logan, and Kathleen Sullivan Sealey
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Fishery ,Marine conservation ,Geography ,geography.geographical_feature_category ,Sea level rise ,Ecosystem ,Coral reef ,Dry climate ,Tourism - Abstract
A small arc of islands in the Tropical Western Atlantic, the Turks, and Caicos Islands faces significant challenges in developing a tourism economy while protecting fragile island ecosystems, particularly fringing and barrier coral reefs. The islands are particularly low lying, with a tropical dry climate; historically this climate was exploited for solar salt production. The Turks and Caicos today rely exclusively on tourism for their economy. Recent large hurricanes and the threat of sea level rise have challenged the existing development and infrastructure of the islands.
- Published
- 2019
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40. Contributors
- Author
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Peter Aastrup, Mohamed M. Abdel-Daim, Jaime A. Aburto, Alicia Acuña, Moisés A. Aguilera, Jahson Alemu, Lotfi Aleya, L. Álvarez-Filip, Sergey V. Alyomov, Rachid Amara, David Amouroux, Pierre Anschutz, Andrés H. Arias, Christos Arvanitidis, Jerald S. Ault, Bolaji Benard Babatunde, Vicente Barros, María Cielo Bazterrica, Béchir Béjaoui, Trine Bekkby, Jacek Bełdowski, Rodolfo C. Bennett, Agnieszka Beszczyńska-Möller, Donna Marie Bilkovic, Ferdinando Boero, David Boertmann, Angel Borja, Alejandro Bortolus, Sandra E. Botté, Luis Bravo, Bernardo R. Broitman, Ernesto Brugnoli, Brenda Burd, JoAnn M. Burkholder, Lawrence B. Cahoon, Sara Calabrese, Yiping Cao, Patricia G. Cardoso, Norving J.T. Cardoza, Xavier Chiappa-Carrara, Brindusa Cristina Chiotoroiu, Tom Christensen, Jorge O. Codignotto, Sarah Cook, Roberto Danovaro, Jean-Claude Dauvin, Antonio M. de Frias Martins, Silvia G. De Marco, Juan Domingo Delgado, Stacy L. Deppeler, Amel Dhib, Mamadou Diop, Cheikh Diop, Marina Dolbeth, Muhammet Duman, Monia El Bour, Rym Ennouri, Cecilia Enríquez, Hüsnü Eronat, Bettina Fach, Melisa D. Fernández Severini, Mouna Fertouna-Bellekhal, Sandra Fiori, James W. Fourqurean, Helene Frigstad, Janne Fritt-Rasmussen, François Galgani, Rafael A. García, R. Garza-Pérez, María Andrea Gavio, Carlos F. Gaymer, Stefan Gelcich, Marcela S. Gerpe, Ferdinand Dumbari Giadom, Erica Giarratano, Mónica Noemí Gil, Judith Gobin, Moncho Gómez-Gesteira, Gongora María Eva Góngora, Shannon Gore, Norman Green, Amy E. Grogan, Valeria A. Guinder, Juan Manuel Gutiérrez, Anders G. Hagen, Christopher Harman, Ioannis Hatzianestis, Kirk J. Havens, Rasmus Hedeholm, Mohamed-Amine Helali, Carl H. Hershner, Kieth Holmes, Jennifer Jackson, Stephen C. Jameson, Kostas Kapiris, Øyvind Kaste, Monika Kędra, Inès Khedhri, Ruy K.P. Kikuchi, Ferah Kocak, Filiz Kucuksezgin, Karol Kuliński, Noelia La Colla, Zelinda M.A.N. Leão, Diego Lirman, Alan Logan, Boris A. López, María Celeste López Abbate, Jerome J. Lorenz, Gustavo Lovrich, Michael A. Mallin, Panagiota Maragou, Jorge E. Marcovecchio, Marino-Tapia Ismael, Maria Virgínia Alves Martins, Karen McLaughlin, Flemming Merkel, Molly M. Mitchell, Azad Mohammed, Terry Mohammed, Vivian Montecino, Alejandro J. Monti, Shelly Moore, Adele K. Morrison, Brian Morton, Anders Mosbech, Pablo Muniz, Andrew Myers, Maite Narvarte, Ana L. Oliva, Marília D.M. Oliveira, Tatyana S. Osadchaya, Achref Othmani, Baghdad Ouddane, Walid Oueslati, Eivind Oug, Panayotis Panayotidis, Vassilis P. Papadopoulos, Vanesa Papiol, Marcela Pascual, Aníbal Pauchard, Alexandra Pavlidou, Giorgos Paximadis, Idil Pazi, Janusz Pempkowiak, Victor Quintino, Nancy N. Rabalais, Marcel Ramos, Miroslav Rangelov, Tania Raymond, Paulo Relvas, Cristóbal Reyes-Hernández, Rodrigo Riera, Frank Rigét, R. Rioja-Nieto, Andrés L. Rivas, Diego H. Rodríguez, José A. Rutllant, Claudio A. Sáez, Dimitris Sakellariou, Baris Salihoglu, Maria Salomidi, Denise M. Sanger, Rui Santos, Ricardo Delfino Schenke, Kenneth Schiff, Kathleen Sullivan Sealey, Alexandra Silva, Nomiki Simboura, Struan R. Smith, Erik Smith, Ronaldo Sousa, Carla V. Spetter, Jonathan S. Stark, Kara Stevens, Beata Szymczycha, Alicia Tagliorette, Martin Thiel, Richard Thomson, Nadezhda Todorova, Tolga Gonul, Lamia Trabelsi, Hilde Trannum, Souad Turki, R. Eugene Turner, Fernando Ugarte, María C. Uyarra, Luis Valdés, Nelson Valdivia, Vasil Vasilev, Natalia Venturini, Tammy Warren, Susse Wegeberg, Stephanie White, Kathleen Wood, Stuart P. Wynne, Cintia Yamashita, Noureddine Zaaboub, Nenibarini Zabbey, Agata Zaborska, Sergia Zalba, and Boutheina Ziadi
- Published
- 2019
- Full Text
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41. Idiopathic Intracranial Hypertension and Multiple Sclerosis
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Anthony Thompson, Kathleen Wood, Nickolas Garson, Charles G. Maitland, Stephanie Figueira, and Brooke Hartenstein
- Subjects
Pseudotumor Cerebri ,Pediatrics ,medicine.medical_specialty ,Multiple Sclerosis ,business.industry ,Incidence ,Multiple sclerosis ,Incidence (epidemiology) ,Headache ,General Medicine ,Visual symptoms ,medicine.disease ,03 medical and health sciences ,0302 clinical medicine ,Neurology ,Humans ,Medicine ,030212 general & internal medicine ,Neurology (clinical) ,Elevated Intracranial Pressure ,business ,030217 neurology & neurosurgery - Abstract
Unexplained elevated intracranial pressure occasionally develops in individuals with Multiple Sclerosis (MS). Visual symptoms and signs are common to both conditions. An awareness of this association is particularly relevant due to the increased incidence of headache in MS and the frequent overlap of symptoms and signs in both conditions.
- Published
- 2021
- Full Text
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42. Effect of coiling treatment on microstructural development and precipitate strengthening of a strip cast steel
- Author
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Nicole Stanford, Peter Hodgson, Adam Taylor, Kathleen Wood, Thomas Dorin, Dorin, Thomas, Wood, Kathleen, Taylor, Adam, Hodgson, Peter, and Stanford, Nicole
- Subjects
Materials science ,small angle scattering ,Polymers and Plastics ,02 engineering and technology ,Atom probe ,precipitation ,Lath ,engineering.material ,01 natural sciences ,law.invention ,strip casting ,law ,Ferrite (iron) ,0103 physical sciences ,010302 applied physics ,Supersaturation ,Precipitation (chemistry) ,Metallurgy ,Metals and Alloys ,021001 nanoscience & nanotechnology ,Microstructure ,Small-angle neutron scattering ,Electronic, Optical and Magnetic Materials ,atom probe tomography ,Transmission electron microscopy ,Ceramics and Composites ,engineering ,0210 nano-technology - Abstract
The effect of a simulated coiling treatment on a strip cast Nb-containing steel has been investigated. A lath ferritic supersaturated microstructure was observed in the as-cast condition with no coiling. The microstructure remained lath like during coiling at high temperature (850 °C) and the formation of chemically complex Nb-rich precipitates containing C, N, Si and S was observed. Coiling at an intermediate temperature (700 °C) caused the formation of polygonal ferrite with a dendritic morphology due to chemical micro-segregation. The polygonal ferrite contained Nb(C,N) precipitates. The microstructure remained lath like at the lowest coiling temperature (600 °C). In the latter case the precipitation of Nb-rich clusters was observed, and atom probe tomography revealed them to be ∼85% Fe. Small angle neutron scattering and transmission electron microscopy were used to quantify precipitation kinetics during coiling and the mechanical properties were evaluated with a shear punch apparatus. A yield strength model was developed to describe the observed mechanical behaviour, and this showed that the two largest contributors to strength were the bainitic microstructure and the Nb-rich precipitates. Strategies to further strengthen these materials are suggested. Refereed/Peer-reviewed
- Published
- 2016
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43. Apolipoprotein C-II Adopts Distinct Structures in Complex with Micellar and Submicellar Forms of the Amyloid-Inhibiting Lipid-Mimetic Dodecylphosphocholine
- Author
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Kathleen Wood, Timothy M. Ryan, Duncan J. McGillivray, Cyril C. Curtain, Nigel Kirby, Michael D. W. Griffin, Robert Knott, and Colin L. Masters
- Subjects
Models, Molecular ,0301 basic medicine ,Amyloid ,Apolipoprotein B ,Protein Conformation ,Phosphorylcholine ,Apolipoprotein C-II ,Biophysics ,Peptide ,Protein aggregation ,Micelle ,Protein Aggregates ,03 medical and health sciences ,Protein structure ,Biomimetic Materials ,Micelles ,Lipid Transport ,chemistry.chemical_classification ,biology ,Protein Stability ,Proteins ,Lipids ,3. Good health ,030104 developmental biology ,Biochemistry ,chemistry ,biology.protein ,lipids (amino acids, peptides, and proteins) - Abstract
The formation of amyloid deposits is a common feature of a broad range of diseases, including atherosclerosis, Alzheimer's disease, and Parkinson's disease. The basis and role of amyloid deposition in the pathogenesis of these diseases is still being defined, however an interesting feature of amyloidogenic proteins is that the majority of the pathologically associated proteins are involved in lipid homeostasis, be it in lipid transport, incorporation into membranes, or the regulation of lipid pathways. Thus, amyloid-forming proteins commonly bind lipids, and lipids are generally involved in the proper folding of these proteins. However, understanding of the basis for these lipid-related aspects of amyloidogenesis is lacking. Thus, we have used the apolipoprotein C-II amyloid model system in conjunction with x-ray and neutron scattering analyses to address this problem. Apolipoprotein C-II is a well-studied model system of systemic amyloid fibril formation, with a clear and well-defined pathway for fibril formation, where the effects of lipid interaction are characterized, particularly for the lipid mimetic dodecylphosphocholine. We show that the micellar state of an inhibitory lipid can have a very significant effect on protein conformation, with micelles stabilizing a particular α-helical structure, whereas submicellar lipids stabilize a very different dimeric, α-helical structure. These results indicate that lipids may have an important role in the development and progression of amyloid-related diseases.
- Published
- 2016
- Full Text
- View/download PDF
44. Nanostructured mesoporous gold biosensor for microRNA detection at attomolar level
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Abu Ali Ibn Sina, Tzu-En Lin, Mutasim Billah, Nam-Trung Nguyen, Jeonghun Kim, Kenya Kani, Carlos Salomon, Anant Preet, Andrew E. Whitten, Muhammad J. A. Shiddiky, Yusuke Yamauchi, Mostafa Kamal Masud, Matt Trau, Shahriar A. Hossain, Kathleen Wood, Jongbeom Na, Jungmok You, and Victor Malgras
- Subjects
Biomedical Engineering ,Biophysics ,Nanotechnology ,Biosensing Techniques ,02 engineering and technology ,01 natural sciences ,Limit of Detection ,Electrochemistry ,Electrodes ,Faradaic current ,Chemistry ,010401 analytical chemistry ,Electrochemical Techniques ,General Medicine ,021001 nanoscience & nanotechnology ,Nanostructures ,0104 chemical sciences ,Electrochemical gas sensor ,MicroRNAs ,Linear range ,Electrode ,Nanoarchitectonics ,Gold ,Differential pulse voltammetry ,0210 nano-technology ,Mesoporous material ,Biosensor ,Biotechnology - Abstract
Advances in nanoarchitectonics enable a wide variety of nanostructured electrodes with tunable shapes and surface for constructing sensitive biosensors. Herein we demonstrate the fabrication of a mesoporous gold (Au) biosensor for the specific and sensitive detection of miRNA in a relatively simple and portable manner. The electrocatalytic activity of the mesoporous Au electrode (MPGE) towards the redox reaction of Fe(CN)6]3-/4- expansively examined. Leveraging the electrocatalytic activity and signal enhancement capacity of the MPGE, an ultrasensitive and specific electrochemical sensor was developed for the detection of microRNA (miRNA). The target miRNA from spiked samples is selectively isolated and purified using magnetic bead-capture probe followed by the direct adsorption on the MPGE through direct affinity interaction between miRNA and mesoporous Au surface. The MPGE-bound miRNA is then quantified by differential pulse voltammetry (DPV) using [Fe(CN)6]4-/3- redox system (Faradaic current decrease with reference to the bare MPGE). This method evades the cumbersome PCR (polymerase chain reaction) and enzymatic amplification steps. This is a single-step assay building which can detect a wide dynamic linear range (100 aM to 1 nM) of miRNA with an ultra-low limit detection of 100 aM and present high translational potentiality for the development of high-performance detection tools for clinics.
- Published
- 2020
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45. Electrochemical Synthesis of Mesoporous Architectured Ru Films Using Supramolecular Templates
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Hyunsoo Lim, Kenya Kani, Jongbeom Na, Ömer Dag, Bo Jiang, Yusuke Yamauchi, Md. Shahriar A. Hossain, Joel Henzie, Carlos Salomon, Kathleen Wood, Muhammad Iqbal, Alan E. Rowan, and Dağ, Ömer
- Subjects
Materials science ,Supramolecular templates ,Oxide ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,Electrochemistry ,01 natural sciences ,Redox ,Biomaterials ,chemistry.chemical_compound ,Mesoporous Ru ,Ru oxide ,Supercapacitors ,General Materials Science ,Supercapacitor ,Thermal oxidation ,General Chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Ruthenium ,chemistry ,Chemical engineering ,Electrode ,Mesoporous films ,0210 nano-technology ,Mesoporous material ,Biotechnology - Abstract
The electrochemical synthesis of mesoporous ruthenium (Ru) films using sacrificial self-assembled block polymer micelles templates, and its electrochemical surface oxidation to RuOx is described. Unlike standard methods such as thermal oxidation, the electrochemical oxidation method described here retains the mesoporous structure. Ru oxide materials serve as high-performance supercapacitor electrodes due to their excellent pseudocapacitive behavior. The mesoporous architectured film shows superior specific capacitance (467 F g-1 Ru ) versus a nonporous Ru/RuOx electrode (28 F g-1 Ru ) that is prepared via the same method but omitting the pore-directing polymer. Ultrahigh surface area materials will play an essential role in increasing the capacitance of this class of energy storage devices because the pseudocapacitive redox reaction occurs on the surface of electrodes.
- Published
- 2020
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46. Defining the 'C' in Community Supported Agriculture
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Jennifer Haney, Michael Ferguson, Elyzabeth Engle, Kathleen Wood, Kyle Olcott, A. Luloff, and James Finley
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business.industry ,Field research ,Identity (social science) ,Narrative ,Mythology ,Sociology ,Certification ,Public relations ,Marketing ,business ,Popularity ,Variety (cybernetics) ,Social movement - Abstract
Since the mid-1980s, participants in community supported agriculture (CSA) have promoted, proliferated, and adapted the CSA model, resulting in CSAs gaining popularity as a trusted "brand." They have developed and expanded CSA by pursuing common branding strategies, such as building name recognition, differentiating the brand from other farm and food producers, and developing CSA narratives and mythologies with positive associations that attract advocates. However, CSA has not been branded via a typical centralized, hierarchical process, but rather through the independent, informally organized collective efforts of its farmers and members. With no standardized licensing or certification process (unlike "organic"), CSAs remain liberated from a strict set of allowed practices, yet debates still occur about what constitutes a "real" CSA. Despite the fact that many idealistic promotional claims of CSA have been validated, one glaring weakness is that many CSA farmers still struggle to achieve financial security. The positive brand mythology surrounding CSA has made it difficult for participants to acknowledge and confront this shortcoming. Drawing on qualitative field research and review of archival CSA materials, this paper examines the identity making and branding of CSA. I constructively critique some of the most fundamental aspects of CSA: its constructed image and its actual practice. Through this lens, I ask how the independent, open-source branding has helped or hindered CSA proponents in achieving goals. By focusing on these aspects my hope is that a variety of advocates, academics, farmers, CSA members, and others, can collaborate on developing a positive next era for CSA and its offshoots both within and beyond agriculture and food—projects aimed at strengthening consumer/producer alliances, cooperative practices, and ethically based community economies.
- Published
- 2015
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47. Defining the 'C' in community supported agriculture
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Michael D. Ferguson, Jennifer M. Haney, Kathleen Wood, Elyzabeth W. Engle, A. E. Luloff, Kyle Olcott, and James C. Finley
- Subjects
Community Supported Agriculture ,Economics and Econometrics ,media_common.quotation_subject ,Satisfaction ,lcsh:Recreation. Leisure ,lcsh:TX341-641 ,Context (language use) ,Community ,lcsh:GV1-1860 ,lcsh:Home economics ,lcsh:Regional planning ,CSA ,lcsh:Technology ,lcsh:Urban groups. The city. Urban sociology ,lcsh:Agriculture ,lcsh:Social Sciences ,lcsh:HT51-1595 ,Perception ,Materials Chemistry ,Media Technology ,lcsh:HT101-395 ,lcsh:Human ecology. Anthropogeography ,Marketing ,Community development ,lcsh:Environmental sciences ,media_common ,lcsh:GE1-350 ,lcsh:T ,business.industry ,lcsh:S ,lcsh:Geography. Anthropology. Recreation ,lcsh:HT390-395 ,Forestry ,Public relations ,Civic Agriculture ,Livelihood ,lcsh:H ,Interpersonal ties ,lcsh:G ,Agriculture ,lcsh:Communities. Classes. Races ,Food systems ,lcsh:GF1-900 ,business ,Psychology ,lcsh:Nutrition. Foods and food supply ,lcsh:TX1-1110 ,Meaning (linguistics) - Abstract
Localized agriculture is theorized to provide socio-environmental benefits to the community while ensuring a livelihood for local farmers. Much of the food systems literature refers to such an arrangement as civic agriculture, which is characterized as promoting community development by strengthening social ties among the various nodes of the localized food system. However, there is little literature that identifies the attributes of community and the specific mechanisms through which community qualities are produced, modeled, or replicated. This study's goal is to identify the meaning of community as used in the phrase "community supported agriculture" (CSA) by asking members and operators of local CSAs how they define community within the context of their membership. On-site interviews were conducted at the produce pick-up locations of four CSA farms in central Pennsylvania, resulting in a convenience sample of 97 CSA members and four operators. The survey instrument utilized open and closed-ended questions to collect information on farmer and member perceptions of their CSA community, motivations to join, and satisfaction with their experiences. The results suggest respondents are highly satisfied with products and services provided through their CSA. However, there are statistically significant differences in satisfaction scores across the four sampled farms. These differences support findings drawn from the open-ended questions indicating these CSA farms varied in member-defined attributes of a CSA community. Farm management practices, level of personal interactions, and other factors appear to have significant effects on CSA members' perception of community.
- Published
- 2015
- Full Text
- View/download PDF
48. A Haunted Summer
- Author
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Adrianne Kathleen Wood and Adrianne Kathleen Wood
- Subjects
- Paranormal fiction, Private investigators--Fiction
- Abstract
Kristy and Lawrence are a couple who work together as Private Investigators. Kristy is fascinated by the paranormal while Lawrence remains sceptical. She has added psychic skills to her resume which has led to her to being relegated to the role of nanny when she applies for investigative work. She is rescued from this role by a distraught mother, Suzanne, who is convinced her son, Eddy, was murdered. Eddy had died in a house fire, along with a young girl, assumed to be Ashlin, who had been left in charge of the house. Kristy is led deeper into the maze of relationships of Eddy and Ashlin and Eddy's family. Kristy finds Ashlin's journal and is fascinated by her account of a psychic's vision of a young boy and girl dying, in a fire, in a house by the sea. Finally, the case appears to have been wrapped up, at least from sceptical Lawrence's point of view, but following events show all is not as it seems.
- Published
- 2017
49. Effect of Protic Ionic Liquid Nanostructure on Phospholipid Vesicle Formation
- Author
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Rob Atkin, Kathleen Wood, Saffron J. Bryant, and Gregory G. Warr
- Subjects
Liposome ,Nanostructure ,Chemistry ,Bilayer ,Vesicle ,neutron scattering ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,0104 chemical sciences ,030605 - Solution Chemistry [FoR] ,chemistry.chemical_compound ,Differential scanning calorimetry ,Chemical engineering ,Lyotropic liquid crystal ,Ionic liquid ,Organic chemistry ,030304 - Physical Chemistry of Materials [FoR] ,Ethylammonium nitrate ,0210 nano-technology ,ionic liquid - Abstract
The formation of bilayer-based lyotropic liquid crystals and vesicle dispersions by phospholipids in a range of protic ionic liquids has been investigated by polarizing optical microscopy using isothermal penetration scans, differential scanning calorimetry, and small angle X-ray and neutron scattering. The stability and structure of both lamellar phases and vesicle dispersions is found to depend primarily on the underlying amphiphilic nanostructure of the ionic liquid itself. This finding has significant implica-tions for the use of ionic liquids in soft and biological materials and for biopreservation, and demon-strates how vesicle structure and properties can be controlled through selection of cation and anion. For a given ionic liquid, systematic trends in bilayer thickness, chain-melting temperature and enthalpy in-crease with phospholipid acyl chain length, paralleling behaviour in aqueous systems. Australian Research Council, ANSTO, AINSE
- Published
- 2017
50. Continuous mesoporous pd films by electrochemical deposition in nonionic micellar solution
- Author
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Andrew E. Whitten, Victor Malgras, Kathleen Wood, Yusuke Yamauchi, Toshiaki Takei, Muhammad Iqbal, Asep Sugih Nugraha, Ömer Dag, Md. Shahriar A. Hossain, Toru Asahi, Daisuke Baba, Cuiling Li, and Bo Jiang
- Subjects
Digital storage ,General Chemical Engineering ,02 engineering and technology ,Surface active agents ,01 natural sciences ,Micelle ,chemistry.chemical_compound ,Electrolytes ,Materials Chemistry ,Copolymer ,Electrochemistry ,Oxide films ,Micelles ,Polyethylene oxides ,Nanoporous ,Nonionic surfactants ,Electrocatalysts ,021001 nanoscience & nanotechnology ,Mesoporous organosilica ,Metals ,Electrocatalytic activity ,visual_art ,visual_art.visual_art_medium ,Catalyst activity ,0210 nano-technology ,Ethanol oxidation reaction ,Palladium ,Palladium compounds ,Materials science ,Inorganic chemistry ,Mesostructured materials ,Neutron scattering ,Electrochemical deposition ,010402 general chemistry ,Metal ,Ethylene ,Synthetic metals ,Electrodeposition ,Propylene oxide ,Deposition ,Surfactant concentrations ,Electrodes ,Reduction ,Ethylene oxide ,Electrochemical applications ,General Chemistry ,Mesoporous materials ,0104 chemical sciences ,Co-ordination chemistries ,chemistry ,Cross-sectional observations ,Mesoporous material ,Coordination reactions - Abstract
Mesoporous metals that combine catalytic activity and high surface area can provide more opportunities for electrochemical applications. Various synthetic methods, including hard and soft templating, have been developed to prepare mesoporous/nanoporous metals. Micelle assembly, typically involved in soft-templates, is flexible and convenient for such purposes. It is, however, difficult to control, and the ordering is significantly destroyed during the metal deposition process, which is detrimental when it comes to designing precisely mesostructured materials. In the present work, mesoporous Pd films were uniformly electrodeposited using a nonionic surfactant, triblock copolymer poly(ethylene oxide)-b-poly(propylene oxide)-b-poly(ethylene oxide), as a pore-directing agent. The interaction between micelles and metal precursors greatly influences the metal growth and determines the final structure. The water-coordinated species interact with the ethylene oxide moiety of the micelles to effectively drive the Pd(II) species toward the working electrode surface. From small-angle neutron scattering data, it is found that spherical P123 micelles, with an average diameter of ∼14 nm, are formed in the electrolyte, and the addition of Pd ions does not significantly modify their structure, which is the essence of the micelle assembly approach. The uniformly sized mesopores are formed over the entire mesoporous Pd film and have an average pore diameter of 10.9 nm. Cross-sectional observation of the film also shows mesopores spanning continuously from the bottom to the top of the film. The crystallinity, crystal phase, and electronic coordination state of the Pd film are also confirmed. Through this study, it is found that the optimized surfactant concentration and applied deposition potential are the key factors to govern the formation of homogeneous and well-distributed pores over the entire film. Interestingly, the as-prepared mesoporous Pd films exhibit superior electrocatalytic activity toward the ethanol oxidation reaction by fully utilizing the accessible active surface area. Our approach combines electrochemistry with colloidal and coordination chemistry and is widely applicable to other promising metals and alloy electrocatalysts.
- Published
- 2017
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