28 results on '"Khuntirat B"'
Search Results
2. Characterization of Orientia tsutsugamushi Isolated from Wild-Caught Rodents and Chiggers in Northern Thailand
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KHUNTIRAT, B., LERDTHUSNEE, K., LEEPITAKRAT, W., KENGLUECHA, A., WONGKALASIN, K., MONKANNA, T., MUNGVIRIYA, S., JONES, J. W., and COLEMAN, R. E.
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- 2003
3. Scrub Typhus: Vector Competence of Leptotrombidium chiangraiensis Chiggers and Transmission Efficacy and Isolation of Orientia tsutsugamushi
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LERDTHUSNEE, K., KHUNTIRAT, B., LEEPITAKRAT, W., TANSKUL, P., MONKANNA, T., KHLAIMANEE, N., INLAO, I., KENGLUECHA, A., MUNGVIRIYA, S., CHANDRANOI, K., KRAIROJANANAN, P., BODHIDATTA, D., RODKWAMTHOOK, W., PHULSUKSOMBATI, D., SANGJUN, N., WATCHARAPICHAT, P., JONES, J. W., and COLEMAN, R. E.
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- 2003
4. Pandemic influenza A (H1N1) virus infections among villagers living in rural Thailand
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Khuntirat, B., primary, Yoon, I.-K., additional, Krueger, W., additional, Chittaganrnpitch, M., additional, Supawat, K., additional, Blair, P., additional, Putnam, S.D., additional, Gibbons, R.V., additional, Sawanpanyalert, P., additional, Heil, G.L., additional, Friary, J.A., additional, and Gray, G.C., additional
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- 2012
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5. Evidence for Subclinical Avian Influenza Virus Infections Among Rural Thai Villagers
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Khuntirat, B. P., primary, Yoon, I.-K., additional, Blair, P. J., additional, Krueger, W. S., additional, Chittaganpitch, M., additional, Putnam, S. D., additional, Supawat, K., additional, Gibbons, R. V., additional, Pattamadilok, S., additional, Sawanpanyalert, P., additional, Heil, G. L., additional, Friary, J. A., additional, Capuano, A. W., additional, and Gray, G. C., additional
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- 2011
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6. Molecular evolution and intragenic recombination of the merozoite surface protein MSP-3α from the malaria parasitePlasmodium vivaxin Thailand
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MASCORRO, C. N., primary, ZHAO, K., additional, KHUNTIRAT, B., additional, SATTABONGKOT, J., additional, YAN, G., additional, ESCALANTE, A. A., additional, and CUI, L., additional
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- 2005
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7. Scrub Typhus
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LERDTHUSNEE, K., primary, KHUNTIRAT, B., additional, LEEPITAKRAT, W., additional, TANSKUL, P., additional, MONKANNA, T., additional, KHLAIMANEE, N., additional, INLAO, I., additional, KENGLUECHA, A., additional, MUNGVIRIYA, S., additional, CHANDRANOI, K., additional, KRAIROJANANAN, P., additional, BODHIDATTA, D., additional, RODKWAMTHOOK, W., additional, PHULSUKSOMBATI, D., additional, SANGJUN, N., additional, WATCHARAPICHAT, P., additional, JONES, J. W., additional, and COLEMAN, R. E., additional
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- 2003
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8. B16 PCR Detection of Orientia tsutsugamushi (a pathogen of scrub typhus) from Tissue Samples and Chiggers of Wild Caught Rodents in Thailand
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LERDTHUSNEE, K., primary, KHUNTIRAT, B., additional, KENGLUECHA, A., additional, LEEPITAKRAT, W., additional, MONKANNA, T., additional, MUNGVIRIYA, S., additional, CHANDRANOI, K., additional, and COLEMAN, R.E., additional
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- 2002
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9. Characterization of Orientia tsutsugamushiIsolated from Wild-Caught Rodents and Chiggers in Northern Thailand
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KHUNTIRAT, B., LERDTHUSNEE, K., LEEPITAKRAT, W., KENGLUECHA, A., WONGKALASIN, K., MONKANNA, T., MUNGVIRIYA, S., JONES, J. W., and COLEMAN, R. E.
- Abstract
We previously reported Orientia tsutsugamushidetection from tissue samples (kidney, liver, spleen, and whole blood) of 12 wild-caught rodents from Chiangrai Province, northern Thailand. Of the 30 chiggers individually removed from scrub typhus-infected rodents, 2 were found positive for O. tsutsugamushi. We further characterized the O. tsutsugamushidetected from these rodents and chiggers by RFLP using three different enzyme digestions. All 14 O. tsutsugamushisamples (12 from tissue samples and 2 from chiggers) showed different digestion patterns when compared to those of reference strains (Karp, Kato, and Gilliam). Interestingly, nine RFLP profiles were observed from these 14 samples suggesting the presence of high genetic diversity of O. tsutsugamushiin this area. Furthermore, one sample displayed the same RFLP pattern as that of O. tsutsugamushimild resistant strain previously isolated from scrub typhus patient in Chiangrai. Of the two samples from positive chiggers, only one was found to have a similar RFLP pattern to that of its host rodent. DNA sequencing of the entire 56 kDa genome of these O. tsutsugamushisamples is in progress.
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- 2003
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10. Comparison of PCR and microscopy for the detection of asymptomatic malaria in a Plasmodium falciparum/vivax endemic area in Thailand
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Miller Robert, Zollner Gabriela, Rachapaew Nattawan, Kengluecha Ampornpan, Tippayachai Bousaraporn, Maneechai Nongnuj, Promstaporm Sommai, Sattabongkot Jetsumon, Coleman Russell E, Vaughan Jefferson A, Thimasarn Krongtong, and Khuntirat Benjawan
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Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Objective The main objective of this study was to compare the performance of nested PCR with expert microscopy as a means of detecting Plasmodium parasites during active malaria surveillance in western Thailand. Methods The study was performed from May 2000 to April 2002 in the village of Kong Mong Tha, located in western Thailand. Plasmodium vivax (PV) and Plasmodium falciparum (PF) are the predominant parasite species in this village, followed by Plasmodium malariae (PM) and Plasmodium ovale (PO). Each month, fingerprick blood samples were taken from each participating individual and used to prepare thick and thin blood films and for PCR analysis. Results PCR was sensitive (96%) and specific (98%) for malaria at parasite densities ≥ 500/μl; however, only 18% (47/269) of P. falciparum- and 5% (20/390) of P. vivax-positive films had parasite densities this high. Performance of PCR decreased markedly at parasite densities P. falciparum and 24% for P. vivax at densities Conclusion Although PCR performance appeared poor when compared to microscopy, data indicated that the discrepancy between the two methods resulted from poor performance of microscopy at low parasite densities rather than poor performance of PCR. These data are not unusual when the diagnostic method being evaluated is more sensitive than the reference method. PCR appears to be a useful method for detecting Plasmodium parasites during active malaria surveillance in Thailand.
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- 2006
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11. Absence of neutralizing antibodies against influenza A/H5N1 virus among children in Kamphaeng Phet, Thailand.
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Khuntirat B, Love CS, Buddhari D, Heil GL, Gibbons RV, Rothman AL, Srikiatkhachorn A, Gray GC, and Yoon IK
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- Adolescent, Animals, Child, Child, Preschool, Cohort Studies, Cross Reactions, Female, Humans, Influenza, Human virology, Longitudinal Studies, Male, Neutralization Tests, Prospective Studies, Thailand epidemiology, Time Factors, Antibodies, Neutralizing blood, Antibodies, Viral blood, Asymptomatic Infections epidemiology, Influenza A Virus, H5N1 Subtype immunology, Influenza, Human epidemiology, Influenza, Human immunology
- Abstract
Background: Influenza A/H5N1 actively circulated in Kamphaeng Phet (KPP), Thailand from 2004 to 2006. A prospective longitudinal cohort study of influenza virus infection in 800 adults conducted during 2008-2010 in KPP suggested that subclinical or mild H5N1 infections had occurred among this adult cohort. However, this study was conducted after the peak of H5N1 activity in KPP. Coincidentally, banked serum samples were available from a prospective longitudinal cohort study of primary school children who had undergone active surveillance for febrile illnesses from 2004 to 2007 and lived in the same district of KPP as the adult cohort., Objectives: We sought to investigate whether subclinical or mild H5N1 infections had occurred among KPP residents during the peak of H5N1 activity from 2004 to 2006., Study Design: H5N1 microneutralization (MN) assay was performed on banked serum samples from a prospective longitudinal cohort study of primary school children who had undergone active surveillance for febrile illnesses in KPP. Annual blood samples collected from 2004 to 2006 from 251 children were selected based on the criteria that they lived in villages with documented H5N1 infection., Result: No H5N1 neutralizing antibodies were detected in 753 annual blood samples from 251 children., Conclusion: During 2004-2006, very few subclinical or mild H5N1 infections occurred in KPP. Elevated H5N1 MN titers found in the adult cohort in 2008 were likely due to cross-reactivity from other influenza virus subtypes highlighting the complexities in interpreting influenza serological data., (Published by Elsevier B.V.)
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- 2015
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12. Plasmodium falciparum: genetic diversity and complexity of infections in an isolated village in western Thailand.
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Tanabe K, Zollner G, Vaughan JA, Sattabongkot J, Khuntirat B, Honma H, Mita T, Tsuboi T, and Coleman R
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- Adolescent, Adult, Aged, Aged, 80 and over, Asymptomatic Infections epidemiology, Child, Child, Preschool, Gene Frequency, Genes, Essential, Humans, Infant, Malaria, Falciparum blood, Middle Aged, Plasmodium falciparum isolation & purification, Polymerase Chain Reaction, Polymorphism, Single Nucleotide, Sequence Analysis, Thailand, Young Adult, Antigens, Protozoan genetics, Genetic Variation, Malaria, Falciparum epidemiology, Malaria, Falciparum parasitology, Membrane Proteins genetics, Merozoite Surface Protein 1 genetics, Plasmodium falciparum genetics, Protozoan Proteins genetics
- Abstract
Genetic diversity of Plasmodium falciparum is intimately associated with morbidity, mortality and malaria control strategies. It is therefore imperative to study genetic makeup and population structure of this parasite in endemic areas. In Kong Mong Tha, an isolated village in western Thailand, the majority of P. falciparum infections are asymptomatic. In this study we investigated complexity of infections and single nucleotide polymorphisms (SNPs) in the P. falciparum population of Kong Mong Tha, and compared results with those previously obtained from Mae Sod, in northwestern Thailand, where the majority of infections were symptomatic. Using PCR-based determination of the 5' merozoite surface protein 1 gene (msp1) recombinant types, we found that 39% of 59 P. falciparum isolates from Kong Mong Tha had multiple 5' recombinant types with a mean number of 1.54. These values were much lower than those obtained from Mae Sod: 96% for multiple infections and with a mean number of 3.61. Analysis of full-length sequences of two housekeeping genes, the P-type Ca(2+)-transporting ATPase gene (n=33) plus adenylosuccinate lyase gene (n=33), and three vaccine candidate antigen genes, msp1 (n=26), the circumsporozoite protein gene, csp (n=30) and the apical membrane antigen 1 gene, ama 1 (n=32), revealed that in all of these genes within-population SNP diversity was at similar levels between Kong Mong Tha and Mae Sod, suggesting that the extent of MOI and clinical manifestations of malaria are not strongly associated with genetic diversity. Additionally, we did not detect significant genetic differentiation between the two parasite populations, as estimated by the Wright's fixation index of inter-population variance in allele frequencies, suggesting that gene flow prevented the formation of population structuring. Thus, this study highlights unique features of P. falciparum populations in Thailand. The implications of these finding are discussed., (© 2013.)
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- 2015
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13. Dengue virus neutralizing antibody levels associated with protection from infection in thai cluster studies.
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Buddhari D, Aldstadt J, Endy TP, Srikiatkhachorn A, Thaisomboonsuk B, Klungthong C, Nisalak A, Khuntirat B, Jarman RG, Fernandez S, Thomas SJ, Scott TW, Rothman AL, and Yoon IK
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- Adolescent, Adult, Antibodies, Neutralizing immunology, Antibodies, Viral immunology, Child, Child, Preschool, Cluster Analysis, Cohort Studies, Dengue epidemiology, Dengue Virus classification, Disease Susceptibility immunology, Disease Susceptibility virology, Enzyme-Linked Immunosorbent Assay, Female, Humans, Infant, Longitudinal Studies, Male, Neutralization Tests, Polymerase Chain Reaction, Prospective Studies, Thailand epidemiology, Viral Plaque Assay, Antibodies, Neutralizing blood, Antibodies, Viral blood, Dengue immunology, Dengue Virus immunology
- Abstract
Background: Long-term homologous and temporary heterologous protection from dengue virus (DENV) infection may be mediated by neutralizing antibodies. However, neutralizing antibody titers (NTs) have not been clearly associated with protection from infection., Methodology/principal Findings: Data from two geographic cluster studies conducted in Kamphaeng Phet, Thailand were used for this analysis. In the first study (2004-2007), cluster investigations of 100-meter radius were triggered by DENV-infected index cases from a concurrent prospective cohort. Subjects between 6 months and 15 years old were evaluated for DENV infection at days 0 and 15 by DENV PCR and IgM ELISA. In the second study (2009-2012), clusters of 200-meter radius were triggered by DENV-infected index cases admitted to the provincial hospital. Subjects of any age ≥6 months were evaluated for DENV infection at days 0 and 14. In both studies, subjects who were DENV PCR positive at day 14/15 were considered to have been "susceptible" on day 0. Comparison subjects from houses in which someone had documented DENV infection, but the subject remained DENV negative at days 0 and 14/15, were considered "non-susceptible." Day 0 samples were presumed to be from just before virus exposure, and underwent plaque reduction neutralization testing (PRNT). Seventeen "susceptible" (six DENV-1, five DENV-2, and six DENV-4), and 32 "non-susceptible" (13 exposed to DENV-1, 10 DENV-2, and 9 DENV-4) subjects were evaluated. Comparing subjects exposed to the same serotype, receiver operating characteristic (ROC) curves identified homotypic PRNT titers of 11, 323 and 16 for DENV-1, -2 and -4, respectively, to differentiate "susceptible" from "non-susceptible" subjects., Conclusions/significance: PRNT titers were associated with protection from infection by DENV-1, -2 and -4. Protective NTs appeared to be serotype-dependent and may be higher for DENV-2 than other serotypes. These findings are relevant for both dengue epidemiology studies and vaccine development efforts.
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- 2014
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14. High rate of A(H1N1)pdm09 infections among rural Thai villagers, 2009-2010.
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Khuntirat B, Yoon IK, Chittaganpitch M, Krueger WS, Supawat K, Blair PJ, Putnam SD, Gibbons RV, Buddhari D, Sawanpanyalert P, Heil GL, Friary JA, and Gray GC
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- Adolescent, Adult, Aged, Asymptomatic Infections, Child, Child, Preschool, Family Characteristics, Female, Hemagglutination Inhibition Tests, Humans, Incidence, Infant, Influenza A Virus, H1N1 Subtype physiology, Influenza, Human physiopathology, Influenza, Human transmission, Male, Middle Aged, Prospective Studies, Rural Population, Thailand epidemiology, Influenza A Virus, H1N1 Subtype pathogenicity, Influenza, Human epidemiology, Pandemics
- Abstract
Background: Pandemic influenza A(H1N1)pdm09 emerged in Thailand in 2009. A prospective longitudinal adult cohort and household transmission study of influenza-like illness (ILI) was ongoing in rural Thailand at the time of emergence. Symptomatic and subclinical A(H1N1)pdm09 infection rates in the cohort and among household members were evaluated., Methods: A cohort of 800 Thai adults underwent active community-based surveillance for ILI from 2008-2010. Acute respiratory samples from ILI episodes were tested for A(H1N1)pdm09 by qRT-PCR; acute and 60-day convalescent blood samples were tested by A(H1N1)pdm09 hemagglutination inhibition assay (HI). Enrollment, 12-month and 24-month follow-up blood samples were tested for A(H1N1)pdm09 seroconversion by HI. Household members of influenza A-infected cohort subjects with ILI were enrolled in household transmission investigations in which day 0 and 60 blood samples and acute respiratory samples were tested by either qRT-PCR or HI for A(H1N1)pdm09. Seroconversion between annual blood samples without A(H1N1)pdm09-positive ILI was considered as subclinical infection., Results: The 2-yr cumulative incidence of A(H1N1)pdm09 infection in the cohort in 2009/2010 was 10.8% (84/781) with an annual incidence of 1.2% in 2009 and 9.7% in 2010; 83.3% of infections were subclinical (50% in 2009 and 85.9% in 2010). The 2-yr cumulative incidence was lowest (5%) in adults born ≤ 1957. The A(H1N1)pdm09 secondary attack rate among household contacts was 47.2% (17/36); 47.1% of these infections were subclinical. The highest A(H1N1)pdm09 secondary attack rate among household contacts (70.6%, 12/17) occurred among children born between 1990 and 2003., Conclusion: Subclinical A(H1N1)pdm09 infections in Thai adults occurred frequently and accounted for a greater proportion of all A(H1N1)pdm09 infections than previously estimated. The role of subclinical infections in A(H1N1)pdm09 transmission has important implications in formulating strategies to predict and prevent the spread of A(H1N1)pdm09 and other influenza virus strains.
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- 2014
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15. Prospective study of avian influenza virus infections among rural Thai villagers.
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Krueger WS, Khuntirat B, Yoon IK, Blair PJ, Chittagarnpitch M, Putnam SD, Supawat K, Gibbons RV, Bhuddari D, Pattamadilok S, Sawanpanyalert P, Heil GL, and Gray GC
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- Animals, Asymptomatic Infections, Birds, Cross Reactions, Female, Humans, Incidence, Influenza in Birds epidemiology, Influenza in Birds transmission, Influenza, Human blood, Influenza, Human immunology, Influenza, Human transmission, Male, Middle Aged, Prospective Studies, Rural Population, Thailand epidemiology, Antibodies, Viral blood, Influenza A Virus, H5N1 Subtype isolation & purification, Influenza A Virus, H9N2 Subtype isolation & purification, Influenza, Human epidemiology, Reassortant Viruses isolation & purification
- Abstract
Background: In 2008, 800 rural Thai adults living within Kamphaeng Phet Province were enrolled in a prospective cohort study of zoonotic influenza transmission. Serological analyses of enrollment sera suggested this cohort had experienced subclinical avian influenza virus (AIV) infections with H9N2 and H5N1 viruses., Methods: After enrollment, participants were contacted weekly for 24 mos for acute influenza-like illnesses (ILI). Cohort members confirmed to have influenza A infections were enrolled with their household contacts in a family transmission study involving paired sera and respiratory swab collections. Cohort members also provided sera at 12 and 24 months after enrollment. Serologic and real-time RT-PCR assays were performed against avian, swine, and human influenza viruses., Results: Over the 2 yrs of follow-up, 81 ILI investigations in the cohort were conducted; 31 (38%) were identified as influenza A infections by qRT-PCR. Eighty-three household contacts were enrolled; 12 (14%) reported ILIs, and 11 (92%) of those were identified as influenza infections. A number of subjects were found to have slightly elevated antibodies against avian-like A/Hong Kong/1073/1999(H9N2) virus: 21 subjects (2.7%) at 12-months and 40 subjects (5.1%) at 24-months. Among these, two largely asymptomatic acute infections with H9N2 virus were detected by >4-fold increases in annual serologic titers (final titers 1:80). While controlling for age and influenza vaccine receipt, moderate poultry exposure was significantly associated with elevated H9N2 titers (adjusted OR = 2.3; 95% CI, 1.04-5.2) at the 24-month encounter. One subject had an elevated titer (1:20) against H5N1 during follow-up., Conclusions: From 2008-10, evidence for AIV infections was sparse among this rural population. Subclinical H9N2 AIV infections likely occurred, but serological results were confounded by antibody cross-reactions. There is a critical need for improved serological diagnostics to more accurately detect subclinical AIV infections in humans.
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- 2013
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16. Effect of temperature on laboratory reared Anopheles dirus Peyton and Harrison and Anopheles sawadwongporni Rattanarithikul and Green.
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Phasomkusolsil S, Lerdthusnee K, Khuntirat B, Kongtak W, Pantuwatana K, and Murphy JR
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- Animals, Animals, Laboratory, Body Size, Female, Fertility, Male, Temperature, Thailand, Anopheles growth & development
- Abstract
Investigations have shown that female mosquitoes with a larger body size (determined by wing length) exhibit higher feeding rates and greater fecundity relative to smaller mosquitoes. In this study, Anopheles dirus and An. sawadwongporni were reared in the laboratory at two different temperatures (23 degrees C and 30 degrees C). Effects of the rearing temperature on body size, fecundity, and larval development period were examined by measuring wing length, adult body weight at emergence, the number of eggs produced and the length of time from the first to the fourth instar. Rearing temperature had a direct effect on body size, fecundity and larval development period for both species. Mosquitoes of both species reared at 23 degrees C were larger in body size, experienced prolonged development and produced a larger clutch of eggs relative to mosquitoes reared at 30 degrees C. However, there was no temperature effect on egg hatching rate and sex ratio.
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- 2011
17. Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis.
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Han ET, Watanabe R, Sattabongkot J, Khuntirat B, Sirichaisinthop J, Iriko H, Jin L, Takeo S, and Tsuboi T
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- Animals, Base Sequence, Blood parasitology, DNA, Protozoan genetics, DNA, Ribosomal genetics, Humans, Molecular Sequence Data, Polymerase Chain Reaction methods, RNA, Ribosomal, 18S genetics, Sensitivity and Specificity, Malaria diagnosis, Malaria parasitology, Nucleic Acid Amplification Techniques methods, Plasmodium classification, Plasmodium isolation & purification
- Abstract
Loop-mediated isothermal amplification (LAMP), a novel nucleic acid amplification method, was developed for the clinical detection of four species of human malaria parasites: Plasmodium falciparum, P. vivax, P. malariae, and P. ovale. We evaluated the sensitivity and specificity of LAMP in comparison with the results of microscopic examination and nested PCR. LAMP showed a detection limit (analytical sensitivity) of 10 copies of the target 18S rRNA genes for P. malariae and P. ovale and 100 copies for the genus Plasmodium, P. falciparum, and P. vivax. LAMP detected malaria parasites in 67 of 68 microscopically positive blood samples (sensitivity, 98.5%) and 3 of 53 microscopically negative samples (specificity, 94.3%), in good agreement with the results of nested PCR. The LAMP reactions yielded results within about 26 min, on average, for detection of the genus Plasmodium, 32 min for P. falciparum, 31 min for P. vivax, 35 min for P. malariae, and 36 min for P. ovale. Accordingly, in comparison to the results obtained by microscopy, LAMP had a similar sensitivity and a greater specificity and LAMP yielded results similar to those of nested PCR in a shorter turnaround time. Because it can be performed with a simple technology, i.e., with heat-treated blood as the template, reaction in a water bath, and inspection of the results by the naked eye because of the use of a fluorescent dye, LAMP may provide a simple and reliable test for routine screening for malaria parasites in both clinical laboratories and malaria clinics in areas where malaria is endemic.
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- 2007
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18. Comparison of PCR and microscopy for the detection of asymptomatic malaria in a Plasmodium falciparum/vivax endemic area in Thailand.
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Coleman RE, Sattabongkot J, Promstaporm S, Maneechai N, Tippayachai B, Kengluecha A, Rachapaew N, Zollner G, Miller RS, Vaughan JA, Thimasarn K, and Khuntirat B
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- Adolescent, Adult, Aged, Aged, 80 and over, Animals, Child, Child, Preschool, Female, Humans, Infant, Malaria, Falciparum parasitology, Malaria, Vivax parasitology, Male, Middle Aged, Plasmodium falciparum genetics, Plasmodium vivax genetics, Sensitivity and Specificity, Thailand, Malaria, Falciparum diagnosis, Malaria, Vivax diagnosis, Microscopy, Polarization methods, Plasmodium falciparum isolation & purification, Plasmodium vivax isolation & purification, Polymerase Chain Reaction methods
- Abstract
Objective: The main objective of this study was to compare the performance of nested PCR with expert microscopy as a means of detecting Plasmodium parasites during active malaria surveillance in western Thailand., Methods: The study was performed from May 2000 to April 2002 in the village of Kong Mong Tha, located in western Thailand. Plasmodium vivax (PV) and Plasmodium falciparum (PF) are the predominant parasite species in this village, followed by Plasmodium malariae (PM) and Plasmodium ovale (PO). Each month, fingerprick blood samples were taken from each participating individual and used to prepare thick and thin blood films and for PCR analysis., Results: PCR was sensitive (96%) and specific (98%) for malaria at parasite densities > or = 500/microl; however, only 18% (47/269) of P. falciparum- and 5% (20/390) of P. vivax-positive films had parasite densities this high. Performance of PCR decreased markedly at parasite densities <500/microl, with sensitivity of only 20% for P. falciparum and 24% for P. vivax at densities <100 parasites/microl., Conclusion: Although PCR performance appeared poor when compared to microscopy, data indicated that the discrepancy between the two methods resulted from poor performance of microscopy at low parasite densities rather than poor performance of PCR. These data are not unusual when the diagnostic method being evaluated is more sensitive than the reference method. PCR appears to be a useful method for detecting Plasmodium parasites during active malaria surveillance in Thailand.
- Published
- 2006
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19. Gene discovery in Plasmodium vivax through sequencing of ESTs from mixed blood stages.
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Cui L, Fan Q, Hu Y, Karamycheva SA, Quackenbush J, Khuntirat B, Sattabongkot J, and Carlton JM
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- Animals, DNA, Complementary genetics, DNA, Protozoan genetics, Expressed Sequence Tags, Gene Library, Humans, Malaria, Vivax parasitology, Molecular Sequence Data, Genes, Protozoan, Plasmodium vivax genetics
- Abstract
Despite the significance of Plasmodium vivax as the most widespread human malaria parasite and a major public health problem, gene expression in this parasite is poorly understood. To accelerate gene discovery and facilitate the annotation phase of the P. vivax genome project, we have undertaken a transcriptome approach to study gene expression in the mixed blood stages of a P. vivax field isolate. Using a cDNA library constructed from purified blood stages, we have obtained single-pass sequences for approximately 21,500 expressed sequence tags (ESTs), the largest number of transcript tags obtained so far for this species. Cluster analysis revealed that the library is highly redundant, resulting in 5407 clusters. Clustered ESTs were searched against public protein databases for functional annotation, and more than one-third showed a significant match, the majority of these to Plasmodium falciparum proteins. The most abundant clusters were to genes encoding ribosomal proteins and proteins involved in metabolism, consistent with the predominance of trophozoites in the field isolate sample. In spite of the scarcity of other parasite stages in the field isolate, we could identify genes that are expressed in rings, schizonts and gametocytes. This study should facilitate our understanding of the gene expression in P. vivax asexual stages and provide valuable data for gene prediction and annotation of the P. vivax genome sequence.
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- 2005
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20. Comparison of artificial membrane feeding with direct skin feeding to estimate the infectiousness of Plasmodium vivax gametocyte carriers to mosquitoes.
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Sattabongkot J, Maneechai N, Phunkitchar V, Eikarat N, Khuntirat B, Sirichaisinthop J, Burge R, and Coleman RE
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- Adolescent, Adult, Animals, Female, Humans, Insect Vectors parasitology, Insect Vectors physiology, Male, Membranes, Artificial, Middle Aged, Skin, Anopheles parasitology, Anopheles physiology, Feeding Behavior, Malaria, Vivax transmission, Plasmodium vivax pathogenicity
- Abstract
The efficacy of a membrane-feeding apparatus as a means of infecting Anopheles dirus mosquitoes with Plasmodium vivax was compared with direct feeding of mosquitoes on gametocyte carriers. Volunteers participating in the study were symptomatic patients reporting to malaria clinics in western Thailand. Direct mosquito feeds were conducted on 285 P. vivax-infected individuals. Four methods of preparing blood for the membrane-feeding apparatus were evaluated. They included 1) replacement of patient plasma with sera from a P. vivax-naive donor (n = 276), 2) replacement of patient plasma with plasma from a P. vivax-naive donor (n = 83), 3) replacement of patient plasma with that individual's own plasma (n = 80), and 4) whole blood added directly to the feeder (n = 221). Criteria used to compare the different methods included 1) number of feeds infecting mosquitoes, 2) percent of mosquitoes with oocysts, and 3) mean number of oocysts per positive mosquito. For most parameters, the direct- feeding method was not significantly different from methods that replaced patient plasma with sera/plasma from a P. vivax-naive donor. However, direct feeding was more effective than use of whole blood or blood that was reconstituted with the patient's own plasma. These data suggest a possible role of transmission-blocking antibody. The implications towards development of a membrane-feeding assay for the evaluation of candidate transmission-blocking malaria vaccines is discussed.
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- 2003
21. Genetic diversity and multiple infections of Plasmodium vivax malaria in Western Thailand.
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Cui L, Mascorro CN, Fan Q, Rzomp KA, Khuntirat B, Zhou G, Chen H, Yan G, and Sattabongkot J
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- Alleles, Amino Acid Sequence, Animals, Antigens, Protozoan genetics, Base Sequence, Conserved Sequence, Gene Deletion, Gene Frequency, Genetic Markers, Genotype, Humans, Incidence, Malaria, Vivax epidemiology, Phylogeny, Plasmodium vivax classification, Plasmodium vivax isolation & purification, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Prevalence, Protozoan Proteins genetics, Seasons, Sequence Alignment, Thailand epidemiology, Genetic Variation, Malaria, Vivax parasitology, Plasmodium vivax genetics
- Abstract
Using two polymorphic genetic markers, the merozoite surface protein-3alpha (MSP-3alpha) and the circumsporozoite protein (CSP), we investigated the population diversity of Plasmodium vivax in Mae Sod, Thailand from April 2000 through June 2001. Genotyping the parasites isolated from 90 malaria patients attending two local clinics for the dimorphic CSP gene revealed that the majority of the parasites (77%) were the VK210 type. Genotyping the MSP3-alpha gene indicated that P. vivax populations exhibited an equally high level of polymorphism as those from Papua New Guinea, a hyperendemic region. Based on the length of polymerase chain reaction products, three major types of the MSP-3alpha locus were distinguished, with frequencies of 74.8%, 18.7%, and 6.5%, respectively. The 13 alleles distinguished by restriction fragment length polymorphism analysis did not show a significant seasonal variation in frequency. Genotyping the MSP-3alpha and CSP genes showed that 19.3% and 25.6% of the patients had multiple infections, respectively, and the combined rate was 35.6%. Comparisons of MSP-3alpha sequences from nine clones further confirmed the high level of genetic diversity of the parasite and also suggested that geographic isolation may exist. These results strongly indicate that P. vivax populations are highly diverse and multiple clonal infections are common in this malaria-hypoendemic region of Thailand.
- Published
- 2003
- Full Text
- View/download PDF
22. Two types of Plasmodium ovale defined by SSU rRNA have distinct sequences for ookinete surface proteins.
- Author
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Tachibana M, Tsuboi T, Kaneko O, Khuntirat B, and Torii M
- Subjects
- Amino Acid Sequence, Animals, Humans, Malaria parasitology, Molecular Sequence Data, Plasmodium genetics, Polymerase Chain Reaction methods, Protozoan Proteins genetics, Protozoan Proteins metabolism, RNA, Small Nuclear, Sequence Analysis, DNA, Plasmodium classification, Plasmodium growth & development, Protozoan Proteins chemistry, RNA, Protozoan genetics, RNA, Ribosomal genetics
- Published
- 2002
- Full Text
- View/download PDF
23. Naturally occurring mixed infection of Plasmodium vivax VK210 and P. vivax VK247 in anopheles mosquitoes (Diptera: Culicidae) in western Thailand.
- Author
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Coleman RE, Sithiprasasna R, Kankaew P, Kiaattiut C, Ratanawong S, Khuntirat B, and Sattabongkot J
- Subjects
- Animals, Antigens, Protozoan analysis, Antigens, Protozoan immunology, Enzyme-Linked Immunosorbent Assay methods, Plasmodium vivax immunology, Protozoan Proteins analysis, Protozoan Proteins immunology, Thailand, Anopheles parasitology, Plasmodium vivax isolation & purification
- Abstract
We report the natural co-infection of a single Anopheles mosquito with Plasmodium vivax Grassi & Feletti phenotypes VK210 and VK247. In total, 8,452 anopheline mosquitoes collected between June 1999 and July 2001 were tested by ELISA for the presence of circumsporozoite (CS) protein to VK210, VK247, and P. falciparum (Welch) (PF). A total of 29 species was represented; however, the predominant species tested were A. minimus Theobald (4,632), A. sawadwongporni Rattanarithikul & Green (1,248), A. maculatus Theobald (1,201), A. campestris Reid (478), and A. barbirostris Van der Wulp (391). A total of 17 positive mosquitoes was identified by ELISA, and included the following: A. minimus infected with VK210 (5), PF (3), and both VK210 and VK247 (1), A. maculatus infected with VK210 (1), VK247 (1), and both VK210 and VK247 (1), A. campestris infected with VK210 (2), A. sawadwongporni infected with VK247 (1) and PF (1), and A. hodgkini Reid infected with VK247 (1). This is the first report of a single mosquito naturally infected with both VK210 and VK247.
- Published
- 2002
- Full Text
- View/download PDF
24. Adeno-associated virus type 2-mediated gene transfer: role of epidermal growth factor receptor protein tyrosine kinase in transgene expression.
- Author
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Mah C, Qing K, Khuntirat B, Ponnazhagan S, Wang XS, Kube DM, Yoder MC, and Srivastava A
- Subjects
- Cell Line, DNA, Complementary genetics, DNA-Binding Proteins metabolism, Enzyme Inhibitors pharmacology, ErbB Receptors genetics, Genetic Therapy, Genistein pharmacology, Humans, Hydroxyurea pharmacology, Phosphorylation, Transduction, Genetic drug effects, Tyrphostins pharmacology, Dependovirus genetics, ErbB Receptors metabolism, Gene Expression, Gene Transfer Techniques
- Abstract
Adeno-associated virus type 2 (AAV), a single-stranded, DNA-containing, nonpathogenic human parvovirus, has gained attention as a potentially useful vector for human gene therapy. However, the transduction efficiency of AAV vectors varies greatly in different cells and tissues in vitro and in vivo. We have recently documented that a cellular tyrosine phosphoprotein, designated the single-stranded D-sequence-binding protein (ssD-BP), plays an important role in AAV-mediated transgene expression (K. Y. Qing et al., Proc. Natl. Acad. Sci. USA 94:10879-10884, 1997) and that a strong correlation exists between the phosphorylation state of the ssD-BP and AAV transduction efficiency in vitro as well as in vivo (K. Y. Qing et al., J. Virol. 72:1593-1599, 1998). In this report, we document that treatment of cells with specific inhibitors of the epidermal growth factor receptor protein tyrosine kinase (EGF-R PTK) activity, such as tyrphostin, leads to significant augmentation of AAV transduction efficiency, and phosphorylation of the ssD-BP is mediated by the EGF-R PTK. Treatment of cells with EGF results in phosphorylation of the ssD-BP, whereas treatment with tyrphostin causes dephosphorylation of the ssD-BP and consequently leads to increased expression of the transgene. Furthermore, AAV transduction efficiency inversely correlates with expression of the EGF-R in different cell types, and stable transfection of the EGF-R cDNA causes phosphorylation of the ssD-BP, leading to significant inhibition in AAV-mediated transgene expression which can be overcome by the tyrphostin treatment. These data suggest that the PTK activity of the EGF-R is a crucial determinant in the life cycle of AAV and that further studies on the interaction between the EGF-R and the ssD-BP may yield new insights not only into its role in the host cell but also in the successful use of AAV vectors in human gene therapy.
- Published
- 1998
- Full Text
- View/download PDF
25. Characterization of wild-type adeno-associated virus type 2-like particles generated during recombinant viral vector production and strategies for their elimination.
- Author
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Wang XS, Khuntirat B, Qing K, Ponnazhagan S, Kube DM, Zhou S, Dwarki VJ, and Srivastava A
- Subjects
- Base Sequence, Cell Line, Cloning, Molecular, Genome, Viral, Humans, Molecular Sequence Data, Dependovirus genetics, Genetic Vectors, Recombination, Genetic, Virion genetics
- Abstract
The pSub201-pAAV/Ad plasmid cotransfection system was developed to eliminate homologous recombination which leads to generation of the wild-type (wt) adeno-associated virus type 2 (AAV) during recombinant vector production. The extent of contamination with wt AAV has been documented to range between 0.01 and 10%. However, the precise mechanism of generation of the contaminating wt AAV remains unclear. To characterize the wt AAV genomes, recombinant viral stocks were used to infect human 293 cells in the presence of adenovirus. Southern blot analyses of viral replicative DNA intermediates revealed that the contaminating AAV genomes were not authentic wt but rather wt AAV-like sequences derived from recombination between (i) AAV inverted terminal repeats (ITRs) in the recombinant plasmid and (ii) AAV sequences in the helper plasmid. Replicative AAV DNA fragments, isolated following amplification through four successive rounds of amplification in adenovirus-infected 293 cells, were molecularly cloned and subjected to nucleotide sequencing to identify the recombinant junctions. Following sequence analyses of 31 different ends of AAV-like genomes derived from two different recombinant vector stocks, we observed that all recombination events involved 10 nucleotides in the AAV D sequence distal to viral hairpin structures. We have recently documented that the first 10 nucleotides in the D sequence proximal to the AAV hairpin structures are essential for successful replication and encapsidation of the viral genome (X.-S. Wang et al., J. Virol. 71:3077-3082, 1997), and it was noteworthy that in each recombinant junction sequenced, the same 10 nucleotides were retained. We also observed that adenovirus ITRs in the helper plasmid were involved in illegitimate recombination with AAV ITRs, deletions of which significantly reduced the extent of wt AAV-like particles. Furthermore, the combined use of recombinant AAV plasmids lacking the distal 10 nucleotides in the D sequence and helper plasmids lacking the adenovirus ITRs led to complete elimination of replication-competent wt AAV-like particles in recombinant vector stocks. These strategies should be useful in producing clinical-grade AAV vectors suitable for human gene therapy.
- Published
- 1998
- Full Text
- View/download PDF
26. Adeno-associated virus type 2-mediated gene transfer: correlation of tyrosine phosphorylation of the cellular single-stranded D sequence-binding protein with transgene expression in human cells in vitro and murine tissues in vivo.
- Author
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Qing K, Khuntirat B, Mah C, Kube DM, Wang XS, Ponnazhagan S, Zhou S, Dwarki VJ, Yoder MC, and Srivastava A
- Subjects
- Animals, Cell Line, Genetic Therapy, HeLa Cells, Humans, Mice, Mice, Transgenic, Mutation, DNA-Binding Proteins genetics, Dependovirus, Gene Transfer Techniques, Genetic Vectors, Ribonucleoproteins genetics
- Abstract
Although the adeno-associated virus type 2 (AAV)-based vector system has gained attention as a potentially useful alternative to the more commonly used retroviral and adenoviral vectors for human gene therapy, the single-stranded nature of the viral genome, and consequently the rate-limiting second-strand viral DNA synthesis, significantly affect its transduction efficiency. We have identified a cellular tyrosine phosphoprotein, designated the single-stranded D sequence-binding protein (ssD-BP), which interacts specifically with the D sequence at the 3' end of the AAV genome and may prevent viral second-strand DNA synthesis in HeLa cells (K. Y. Qing et al., Proc. Natl. Acad. Sci. USA 94:10879-10884, 1997). In the present studies, we examined whether the phosphorylation state of the ssD-BP correlates with the ability of AAV to transduce various established and primary cells in vitro and murine tissues in vivo. The efficiencies of transduction of established human cells by a recombinant AAV vector containing the beta-galactosidase reporter gene were 293 > KB > HeLa, which did not correlate with the levels of AAV infectivity. However, the amounts of dephosphorylated ssD-BP which interacted with the minus-strand D probe were also as follows: 293 > KB > HeLa. Predominantly the phosphorylated form of the ssD-BP was detected in cells of the K562 line, a human erythroleukemia cell line, and in CD34+ primary human hematopoietic progenitor cells; consequently, the efficiencies of AAV-mediated transgene expression were significantly lower in these cells. Murine Sca-1+ lin- primary hematopoietic stem/progenitor cells contained predominantly the dephosphorylated form of the ssD-BP, and these cells could be efficiently transduced by AAV vectors. Dephosphorylation of the ssD-BP also correlated with expression of the adenovirus E4orf6 protein, known to induce AAV gene expression. A deletion mutation in the E4orf6 gene resulted in a failure to catalyze dephosphorylation of the ssD-BP. Extracts prepared from mouse brain, heart, liver, lung, and skeletal-muscle tissues, all of which are known to be highly permissive for AAV-mediated transgene expression, contained predominantly the dephosphorylated form of the ssD-BP. Thus, the efficiency of transduction by AAV vectors correlates well with the extent of the dephosphorylation state of the ssD-BP in vitro as well as in vivo. These data suggest that further studies on the cellular gene that encodes the ssD-BP may promote the successful use of AAV vectors in human gene therapy.
- Published
- 1998
- Full Text
- View/download PDF
27. Altered expression of adenovirus 12 DNA-binding protein but not DNA polymerase during abortive infection of hamster cells.
- Author
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Lucher LA, Khuntirat B, Zhao J, and Angeletti PC
- Subjects
- Adenovirus Early Proteins, Adenoviruses, Human pathogenicity, Amino Acid Sequence, Animals, Cells, Cultured, Chromatography, Affinity, Cricetinae, DNA-Binding Proteins immunology, DNA-Binding Proteins isolation & purification, Genetic Complementation Test, Humans, Molecular Sequence Data, Oncogene Proteins, Viral metabolism, Peptide Fragments immunology, Adenoviruses, Human metabolism, DNA-Binding Proteins biosynthesis, DNA-Directed DNA Polymerase biosynthesis, Gene Expression Regulation, Viral
- Abstract
Replication of human adenovirus type 12 DNA is blocked in abortively infected baby hamster kidney cells. The activity and accumulation of adenovirus 12 DNA polymerase is equivalent in infected hamster and human cell extracts. However, the accumulation of adenovirus type 12 DNA-binding protein is approximately 120-fold lower in extracts from infected hamster cells when compared to infected permissive human cells. This difference in accumulation is not due to replication of viral DNA during productive infection, since this difference is observed in the presence of hydroxyurea. The DNA-binding protein from infected hamster cells retains the ability to bind denatured DNA-cellulose. An adenovirus 5 early region 1 transformed hamster cell line competent to complement the adenovirus 12 DNA replication defect also stimulates accumulation of the DNA-binding protein even when the cells are treated with hydroxyurea. Thus, the reduced expression of the viral DNA-binding protein may play a role in the mechanism of abortive infection of hamster cells by adenovirus 12.
- Published
- 1992
- Full Text
- View/download PDF
28. A microscale analytical batch chromatographic method for detecting soluble viral DNA-binding proteins in crude extracts.
- Author
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Khuntirat B and Lucher LA
- Subjects
- Adenoviruses, Human immunology, Cell Extracts, Cells, Cultured, Cellulose analogs & derivatives, DNA, Electrophoresis, Polyacrylamide Gel, Humans, Immunoblotting, Precipitin Tests, Chromatography methods, DNA-Binding Proteins analysis, Viral Proteins analysis
- Abstract
We describe a micro-method for determining the presence in crude cellular extracts of soluble proteins which can bind to immobilized DNA, using the DNA-binding protein of human adenovirus as an example. Batch chromatography of radiolabeled proteins is performed in microcentrifuge tubes containing 50 microliters packed volume of commercially available denatured calf thymus DNA-cellulose. Eluted single-stranded DNA-binding proteins are then visualized by fluorography following gel electrophoresis. The batch procedure gives yields of adenovirus DNA-binding protein which are comparable to those obtained with a mini-column of similar adsorbent volume. The scale of the procedure makes it convenient for simultaneously analyzing multiple samples.
- Published
- 1990
- Full Text
- View/download PDF
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