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3. Lexicographic Product vs $\mathbb Q$-perfect and $\mathbb H$-perfect Pseudo Effect Algebras

Author

Dvurecenskij, A. and Kolarik, M.

Subjects
Mathematical Physics, 03G12
Abstract

We study the Riesz Decomposition Property types of the lexicographic product of two po-groups. Then we apply them to the study of pseudo effect algebras which can be decomposed to a comparable system of non-void slices indexed by some subgroup of real numbers. Finally, we present their representation by the lexicographic product.

Published
2013

6. In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed.

Author

Tanaka, E., Tanada, K., Hosoe, T., Shrestha, B., Kolařík, M., and Liu, M.

Subjects
SCIENTIFIC literature, DNA sequencing, SPECIES
Abstract

Claviceps (Clavicipitaceae, Hypocreales) was erected in 1853, although ergotism had been well-known for a much longer time. By 2000, about 70 taxa had been described in Claviceps, of which eight species and six varieties were based on Japanese type or authentic specimens. Most of these Japanese Claviceps taxa are based on lost specimens or have invalid names, which means many species practically exist only in the scientific literature. The ambiguous identities of these species have hindered taxonomic resolution of the genus Claviceps. Consequently, we sought and collected more than 300 fresh specimens in search of the lost Japanese ergots. Multilocus phylogenetic analyses based on DNA sequences from LSU, TEF-1a, TUB2, Mcm7, and RPB2 revealed the phylogenetic relationships between the Japanese specimens and known Claviceps spp., as well as the presence of biogeographic patterns. Based on the phylogenetic analysis, host range and morphology, we re-evaluated Japanese Claviceps and recognised at least 21 species in Japan. Here we characterised 14 previously described taxa and designated neo-, lecto- and epi-types for C. bothriochloae, C. imperatae, C. litoralis, C. microspora, C. panicoidearum and C. yanagawaensis. Two varieties were elevated to species rank with designated neotypes, i.e. C. agropyri and C. kawatanii. Six new species, C. miscanthicola, C. oplismeni, C. palustris, C. phragmitis, C. sasae and C. tandae were proposed and described. [ABSTRACT FROM AUTHOR]

Published
2023
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11. Wild rodents harbour high diversity of Arthroderma.

Author

Moulíková, Š., Kolařík, M., Lorch, J. M., Kolarczyková, D., Hubka, V., and Čmoková, A.

Subjects
*RODENTS, *DERMATOPHYTES, *DATA mining, *DATABASES, *REPTILES, *BATS
Abstract

Arthroderma is the most diverse genus of dermatophytes, and its natural reservoir is considered to be soil enriched by keratin sources. During a study on the diversity of dermatophytes in wild small rodents in the Czech Republic, we isolated several strains of Arthroderma. To explore the diversity and ecological significance of these isolates from rodents (n = 29), we characterised the strains genetically (i.e., sequenced ITS, tubb and tef1a), morphologically, physiologically, and by conducting mating experiments. We then compared the rodent-derived strains to existing ITS sequence data from GenBank and the GlobalFungi Database to further investigate biogeography and the association of Arthroderma species with different types of environments. In total, eight Arthroderma species were isolated from rodents, including four previously described species (A. crocatum, A. cuniculi, A. curreyi, A. quadrifidum) and four new species proposed herein, i.e., A. rodenticum, A. simile, A. zoogenum and A. psychrophilum. The geographical distribution of these newly described species was not restricted to the Czech Republic nor rodents. Additional isolates were obtained from bats and other mammals, reptiles, and soil from Europe, North America, and Asia. Data mining showed that the genus has a diverse ecology, with some lineages occurring relatively frequently in soil, whereas others appeared to be more closely associated with live animals, as we observed in A. rodenticum. Low numbers of sequence reads ascribed to Arthroderma in soil show that the genus is rare in this environment, which supports the hypothesis that Arthroderma spp. are not soil generalists but rather strongly associated with animals and keratin debris. This is the first study to utilise existing metabarcoding data to assess biogeographical, ecological, and diversity patterns in dermatophytes. [ABSTRACT FROM AUTHOR]

Published
2023
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13. Host-driven subspeciation in the hedgehog fungus,Trichophyton erinacei, an emerging cause of human dermatophytosis

Author

Čmoková, A., primary, Kolařík, M., additional, Guillot, J., additional, Risco-Castillo, V., additional, Cabañes, F.J., additional, Nenoff, P., additional, Uhrlaß, S., additional, Dobiáš, R., additional, Mallátová, N., additional, Yaguchi, T., additional, Kano, R., additional, Kuklová, I., additional, Lysková, P., additional, Mencl, K., additional, Hamal, P., additional, Peano, A., additional, and Hubka, V., additional

Published
2022
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14. A monograph of Aspergillus section Candidi

Author

Glässnerová, K., primary, Sklenář, F., additional, Jurjević, Ž, additional, Houbraken, J., additional, Yaguchi, T., additional, Visagie, C.M., additional, Gené, J., additional, Siqueira, J.P.Z., additional, Kubátová, A., additional, Kolařík, M., additional, and Hubka, V., additional

Published
2022
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15. Taxonomy of AspergillusseriesVersicolores: species reduction and lessons learned about intraspecific variability

Author

Sklenář, F., primary, Glässnerová, K., additional, Jurjević, Ž., additional, Houbraken, J., additional, Samson, R.A., additional, Visagie, C.M., additional, Yilmaz, N., additional, Gené, J., additional, Cano, J., additional, Chen, A.J., additional, Nováková, A., additional, Yaguchi, T., additional, Kolařík, M., additional, and Hubka, V., additional

Published
2022
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16. Fungal Planet 1043 – 29 June 2020

Author

Crous, P.W., Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., de A. Santiago, A.L.C.M., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., Groenewald, J.Z., Crous, Pedro W., Groenewald, Johannes Z., Wingfield, Michael J., Roets, Francois, Swart, Wijnand J., Akulov, Alex, Smith, Jason, Lombard, Lorenzo, Wainhouse, Matt, Douglas, Brian, Denman, Sandra, Johnston, Peter R., Jurjević, Željko, Kolařík, Miroslav, Hubka, Vit, Suwannasai, Nuttika, Martín, María P., Phosri, Cherdchai, Whalley, Anthony J.S., Pitt, John I., Lacey, Ernest, Gilchrist, Cameron L.M., Chooi, Yit-Heng, Figueiredo, Cristiane Nascimento, Sales, Lucas Souza, Andrade, Jackeline Pereira, Figueiredo, Yasmim Freitas, De Souza, Jorge Teodoro, Lacey, Heather J., Hocking, Ailsa D., de L. Oliveira, Renan, Ferreira, Renato J., Lúcio, Paulo Sérgio Marinho, Baseia, Iuri G., Glushakova, Anna M., Tomashevskaya, Maria A., Kachalkin, Aleksey V., Maciá-Vicente, Jose G., Gil-Durán, Carlos, Levicán, Gloria, Chávez, Renato, Sanhueza, Loreto, Ferrer, Alonso, Dima, Bálint, Semwal, Kamal C., Papp, Viktor, Brandrud, Tor Erik, Bhatt, Vinod K., Garrido-Benavent, Isaac, Ballarà, Josep, Liimatainen, Kare, Mahiques, Rafael, Pintos, Ángel, González, Marta, Alvarado, Pablo, Rubio, Enrique, Shuttleworth, Lucas A., Lewis, Alex, Gorton, Caroline, Pérez-Sierra, Ana, Thao, Le Dinh, Hien, Le Thu, Van Liem, Nguyen, Thanh, Ha Minh, Khanh, Tran Ngoc, Saitta, Alessandro, Tedersoo, Leho, Otsing, Eveli, Paz-Conde, Aurelia, Kiss, Levente, Vaghefi, Niloofar, Dearnaley, John D.W., Kelly, Lisa, Bransgrove, Kaylene, Rodríguez-Andrade, Ernesto, Cano-Lira, José F., Stchigel, Alberto M., de Freitas Neto, Julimar F., Sousa, Julieth O., Ovrebo, Clark L., Lee, Hyang Burm, Lim, Hyo Jin, de A. Santiago, André Luiz C.M, Nicolli, Camila Primieri, Carmo, Filipe Sandin, Inácio, Carlos Antonio, Marbach, Phellippe Arthur Santos, Kučera, Viktor, Fedosova, Anna G., Sochorová, Zuzana, Sochor, Michal, Pankratov, Timofey A., Reinoso-Fuentealba, Cintia, Bianchinotti, M. Virginia, Lebel, Teresa, Tegart, Lachlan, Verbeken, Annemieke, Gorczak, Michał, Kisło, Kamil, Wrzosek, Marta, Kruse, Julia, Shivas, Roger G., McTaggart, Alistair R., Lyons, Michael N., Dovana, Francesco, Voyron, Samuele, Vizzini, Alfredo, Ferisin, Giuliano, Raventós, Fernando Esteve, Guard, Frances E., Barrett, Matthew D., Farid, Arian, Smith, Matthew E., Lock, Claire, Vitelli, Joseph S., Holdom, David, Tan, Yu Pei, Kušan, Ivana, Matočec, Neven, Pošta, Ana, Tkalčec, Zdenko, Mešić, Armin, Valenzuela-Lopez, Nicomedes, Guarro, Josep, Čmoková, Adéla, Gonçalves, Micael F.M., Alves, Artur, Spetik, Milan, Berraf-Tebbal, Akila, Eichmeier, Ales, andZcaron, Jurjeviandcacute, eljko, Kučerová, Ivana, Kubátová, Alena, Gibas, Connie F.C., Hamal, Petr, Prencipe, Simona, Spadaro, Davide, Houbraken, Jos, Zapata, Mario, Asenjo, Claudia, Gutiérrez, Mónica, Burgess, Treena I., Abad, Z. Gloria, Kiyashko, Anna, Magaña-Dueñas, Viridiana, Rodríguez, Antonio, Navarro-Ródenas, Alfonso, Arenas, Francisco, Guarnizo, Angel Luigi, Morte, Asunción, Berná, Luis Miguel, Paños, Angela, Muñoz-Mohedano, Justo M., Hunter, Gavin C., Zeil-Rolfe, Isabel, Morin, Louise, Jourdan, Mireille, Venzhik, Aleksandra S., Kapitonov, Vladimir I., and Malysheva, Ekaterina F.

Subjects
ITS nrDNA barcodes, LSU, Fungal Planet description sheets, systematics, new taxa, Research Article
Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects’ frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocephalacria septentrionalis as endophyte from Cladonia rangiferina, Vishniacozyma phoenicis from dates fruit, Volvariella paludosa from swamp. Slovenia, Mallocybe crassivelata on soil. South Africa, Beltraniella podocarpi, Hamatocanthoscypha podocarpi, Coleophoma podocarpi and Nothoseiridium podocarpi (incl. Nothoseiridium gen. nov.) from leaves of Podocarpus latifolius, Gyrothrix encephalarti from leaves of Encephalartos sp., Paraphyton cutaneum from skin of human patient, Phacidiella alsophilae from leaves of Alsophila capensis, and Satchmopsis metrosideri on leaf litter of Metrosideros excelsa. Spain, Cladophialophora cabanerensis from soil, Cortinarius paezii on soil, Cylindrium magnoliae from leaves of Magnolia grandiflora, Trichophoma cylindrospora (incl. Trichophoma gen. nov.) from plant debris, Tuber alcaracense in calcareus soil, Tuber buendiae in calcareus soil. Thailand, Annulohypoxylon spougei on corticated wood, Poaceascoma filiforme from leaves of unknown Poaceae. UK, Dendrostoma luteum on branch lesions of Castanea sativa, Ypsilina buttingtonensis from heartwood of Quercus sp. Ukraine, Myrmecridium phragmiticola from leaves of Phragmites australis. USA, Absidia pararepens from air, Juncomyces californiensis (incl. Juncomyces gen. nov.) from leaves of Juncus effusus, Montagnula cylindrospora from a human skin sample, Muriphila oklahomaensis (incl. Muriphila gen. nov.) on outside wall of alcohol distillery, Neofabraea eucalyptorum from leaves of Eucalyptus macrandra, Diabolocovidia claustri (incl. Diabolocovidia gen. nov.) from leaves of Serenoa repens, Paecilomyces penicilliformis from air, Pseudopezicula betulae from leaves of leaf spots of Populus tremuloides. Vietnam, Diaporthe durionigena on branches of Durio zibethinus and Roridomyces pseudoirritans on rotten wood. Morphological and culture characteristics are supported by DNA barcodes.

Published
2020

17. Host-driven subspeciation in the hedgehog fungus, Trichophyton erinacei, an emerging cause of human dermatophytosis

Author

Čmoková, A., Kolařík, M., Guillot, J., Risco-Castillo, V., Cabañes, F.J., Nenoff, P., Uhrlaß, S., Dobiáš, R., Mallátová, N., Yaguchi, T., Kano, R., Kuklová, I., Lysková, P., Mencl, K., Hamal, P., Peano, A., Hubka, V., Čmoková, A., Kolařík, M., Guillot, J., Risco-Castillo, V., Cabañes, F.J., Nenoff, P., Uhrlaß, S., Dobiáš, R., Mallátová, N., Yaguchi, T., Kano, R., Kuklová, I., Lysková, P., Mencl, K., Hamal, P., Peano, A., and Hubka, V.

Abstract

Trichophyton erinacei is a main cause of dermatophytosis in hedgehogs and is increasingly reported from human infections worldwide. This pathogen was originally described in the European hedgehog (Erinaceus europaeus) but is also frequently found in the African four-toed hedgehog (Atelerix albiventris), a popular pet animal worldwide. Little is known about the taxonomy and population genetics of this pathogen despite its increasing importance in clinical practice. Notably, whether there are different populations or even cryptic species associated with different hosts or geographic regions is not known. To answer these questions, we collected 161 isolates, performed phylogenetic and population-genetic analyses, determined mating-type, and characterised morphology and physiology. Multigene phylogeny and microsatellite analysis supported T. erinacei as a monophyletic species, in contrast to highly incongruent single-gene phylogenies. Two main subpopulations, one specific mainly to Atelerix and second to Erinaceus hosts, were identified inside T. erinacei, and slight differences in the size of microconidia and antifungal susceptibilities were observed among them. Although the process of speciation into two lineages is ongoing in T. erinacei, there is still gene flow between these populations. Thus, we present T. erinacei as a single species, with notable intraspecies variability in genotype and phenotype. The data from wild hedgehogs indicated that sexual reproduction in T. erinacei and de novo infection of hedgehogs from soil are probably rare events and that clonal horizontal spread strongly dominates. The molecular typing approach used in this study represents a suitable tool for further epidemiological surveillance of this emerging pathogen in both animals and humans. The results of this study also highlighted the need to use a multigene phylogeny ideally in combination with other independent molecular markers to understand the species boundaries of dermatophytes.

Published
2022
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18. Fungal Planet description sheets: 1383–1435

Author

Crous, P.W. (Pedro Willem), Boers, J., Holdom, D.G., Osieck, (Eduard R.), Steinrucken, T.V., Tan, Y.P., Vitelli, J.S., Shivas, R.G., Barrett, M.D., Boxshall, A.-G. (Amelia-Grace), Broadbridge, J., Larsson, E., Lebel, T., Pinruan, U., Sommai, S., Alvarado, P., Bonito, G., Decock, C.A., De la Peña-Lastra, S., Delgado, G., Houbraken, J., Maciá-Vicente, J.G., Raja, H.A., Rigueiro-Rodríguez, A., Rodríguez, A., Wingfield, M.J., Adams, S.J., Akulov, A., AL-Hidmi, T., Antonín, V. (Vladimír), Arauzo, S., Arenas, F., Armada, F., Aylward, J., Bellanger, J.-M., Berraf-Tebbal, A., Bidaud, A., Boccardo, F., Cabero, J., Calledda, F., Corriol, G., Crane, J.L., Dearnaley, J.D.W., Dima, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Fine, M., Ganzert, L., Garcia, D., Torres-Garcia, D., Gené, J., Gutiérrez, A., Iglesias, P., Istel, Ł., Jangsantear, P., Jansen, G.M. (Gerrit), Jeppson, M., Karun, N.C., Karich, A., Khamsuntorn, P., Kokkonen, K., Kolařík, M., Kubátová, A., Labuda, R., Lagashetti, A.C., Lifshitz, N., Linde, C., Loizides, M., Luangsa-ard, J.J. (Janet), Lueangjaroenkit, P., Mahadevakumar, S., Mahamedi, A.E., Malloch, D.W., Marincowitz, S., Mateos, A., Moreau, P.-A. (Pierre-Arthur), Miller, A.N., Molia, A., Morte, A., Navarro-Ródenas, A., Nebesářová, J., Nigrone, E., Nuthan, B.R., Oberlies, N.H., Pepori, A.L., Rämä, T., Rapley, D., Reschke, K., Robicheau, B.M., Roets, F., Roux, J., Saavedra, M., Sakolrak, B., Santini, A., Ševčíková, H., Singh, P.N., Singh, S.K., Somrithipol, S., Spetik, M., Sridhar, K.R., Starink-Willemse, M., Taylor, V.A., Iperen, A.L. van, Vauras, J., Walker, A.K., Wingfield, B.D., Yarden, O., Cooke, A.W., Manners, A.G., Pegg, K.G., Groenewald, J.Z., Crous, P.W. (Pedro Willem), Boers, J., Holdom, D.G., Osieck, (Eduard R.), Steinrucken, T.V., Tan, Y.P., Vitelli, J.S., Shivas, R.G., Barrett, M.D., Boxshall, A.-G. (Amelia-Grace), Broadbridge, J., Larsson, E., Lebel, T., Pinruan, U., Sommai, S., Alvarado, P., Bonito, G., Decock, C.A., De la Peña-Lastra, S., Delgado, G., Houbraken, J., Maciá-Vicente, J.G., Raja, H.A., Rigueiro-Rodríguez, A., Rodríguez, A., Wingfield, M.J., Adams, S.J., Akulov, A., AL-Hidmi, T., Antonín, V. (Vladimír), Arauzo, S., Arenas, F., Armada, F., Aylward, J., Bellanger, J.-M., Berraf-Tebbal, A., Bidaud, A., Boccardo, F., Cabero, J., Calledda, F., Corriol, G., Crane, J.L., Dearnaley, J.D.W., Dima, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Fine, M., Ganzert, L., Garcia, D., Torres-Garcia, D., Gené, J., Gutiérrez, A., Iglesias, P., Istel, Ł., Jangsantear, P., Jansen, G.M. (Gerrit), Jeppson, M., Karun, N.C., Karich, A., Khamsuntorn, P., Kokkonen, K., Kolařík, M., Kubátová, A., Labuda, R., Lagashetti, A.C., Lifshitz, N., Linde, C., Loizides, M., Luangsa-ard, J.J. (Janet), Lueangjaroenkit, P., Mahadevakumar, S., Mahamedi, A.E., Malloch, D.W., Marincowitz, S., Mateos, A., Moreau, P.-A. (Pierre-Arthur), Miller, A.N., Molia, A., Morte, A., Navarro-Ródenas, A., Nebesářová, J., Nigrone, E., Nuthan, B.R., Oberlies, N.H., Pepori, A.L., Rämä, T., Rapley, D., Reschke, K., Robicheau, B.M., Roets, F., Roux, J., Saavedra, M., Sakolrak, B., Santini, A., Ševčíková, H., Singh, P.N., Singh, S.K., Somrithipol, S., Spetik, M., Sridhar, K.R., Starink-Willemse, M., Taylor, V.A., Iperen, A.L. van, Vauras, J., Walker, A.K., Wingfield, B.D., Yarden, O., Cooke, A.W., Manners, A.G., Pegg, K.G., and Groenewald, J.Z.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Australia, Agaricus albofoetidus, Agaricus aureoelephanti and Agaricus parviumbrus on soil, Fusarium ramsdenii from stem cankers of Araucaria cunninghamii, Keissleriella sporoboli from stem of Sporobolus natalensis, Leptosphaerulina queenslandica and Pestalotiopsis chiaroscuro from leaves of Sporobolus natalensis, Serendipita petricolae as endophyte from roots of Eriochilus petricola, Stagonospora tauntonensis from stem of Sporobolus natalensis, Teratosphaeria carnegiei from leaves of Eucalyptus grandis × E. camaldulensis and Wongia ficherai from roots of Eragrostis curvula. Canada, Lulworthia fundyensis from intertidal wood and Newbrunswickomyces abietophilus (incl. Newbrunswickomyces gen. nov.) on buds of Abies balsamea. Czech Republic, Geosmithia funiculosa from a bark beetle gallery on Ulmus minor and Neoherpotrichiella juglandicola (incl. Neoherpotrichiella gen. nov.) from wood of Juglans regia. France, Aspergillus rouenensis and Neoacrodontium gallica (incl. Neoacrodontium gen. nov.) from bore dust of Xestobium rufovillosum feeding on Quercus wood, Endoradiciella communis (incl. Endoradiciella gen. nov.) endophytic in roots of Microthlaspi perfoliatum and Entoloma simulans on soil. India, Amanita konajensis on soil and Keithomyces indicus from soil. Israel, Microascus rothbergiorum from Stylophora pistillata. Italy, Calonarius ligusticus on soil. Netherlands, Appendopyricularia juncicola (incl. Appendopyricularia gen. nov.), Eriospora juncicola and Tetraploa juncicola on dead culms of Juncus effusus, Gonatophragmium physciae on Physcia caesia and Paracosmospora physciae (incl. Paracosmospora gen. nov.) on Physcia tenella, Myrmecridium phragmitigenum on dead culm of Phragmites australis, Neochalara lolae on stems of Pteridium aquilinum, Niesslia nieuwwulvenica on dead culm of undetermined Poaceae, Nothodevriesia narthecii (incl. Nothodevriesia gen. nov.) on dead leav

Published
2022
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21. Fungal Planet 953 – 18 December 2019

Author

Crous, P.W., Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsaard, J., Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., De la Peña-Lastra, S., García, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E., Malysheva, V., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamčík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araújo, R.V.B., Bordallo, J.J., Boufleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., Caboň, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., de Castro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, H.C., Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L.V., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I., Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massola, N.S., Mata, M., Miller, A.N., Mongkolsamrit, S., Moreau, P.-A., Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó., Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklenář, F., Smith, J.A., Sousa, J.O., Souza, H.G., De Souza, J.T., Švec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., van Iperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, Ž., Groenewald, J.Z., Crous, Pedro W., van Iperen, Arien L., Groenewald, Johannes Z., Thangavel, Raja, Carnegie, Angus J., Wingfield, Michael J., Roux, Jolanda, Jurjević, Željko, Roets, Francois, Swart, Wijnand J., Smith, Jason A., Lombard, Lorenzo, Moreno, Gabriel, Carlavilla, Juan Ramón, Manjón, José Luis, Bellanger, Jean-Michel, Olariaga, Ibai, Giang, Pham Thi Ha, Alexandrova, Alina V., Morozova, Olga V., Rodrigues, Ana C.M., Baseia, Iuri G., Martín, María P., De la Peña-Lastra, Saúl, Alvarado, Pablo, Requejo, Óscar, Tanchaud, Patrice, Eyssartier, Guillaume, Jargeat, Patricia, Gryta, Hervé, Gil-Durán, Carlos, Chávez, Renato, Vaca, Inmaculada, Loizides, Michael, Moreau, Pierre-Arthur, Zapata, Mario, Palma, María Antonieta, Aninat, María José, Piontelli, Eduardo, Luangsa-ard, Jennifer, Tasanathai, Kanoksri, Noisripoom, Wasana, Hywel-Jones, Nigel, Mongkolsamrit, Suchada, Luangsa-ard, Janet Jennifer, Himaman, Winanda, Garcia, Daniel Torres, Guarro, Josep, Gené, Josepa, Petters-Vandresen, Desirrê Alexia Lourenço, Galli-Terasawa, Lygia Vitória, Terasawa, Francisco, Glienke, Chirlei, Araújo, Ruane V.B., Silva, Bianca D.B., Sousa, Julieth O., Zamora, Juan Carlos, Dios, Maria Martha, Caffot, María Luciana Hernández, Domínguez, Laura S., Kiss, Levente, Vaghefi, Niloofar, Németh, Márk Z., Miller, Andrew N., Fournier, Jacques, Nóbrega, Thaisa F., Ferreira, Bruno W., Barreto, Robert W., Evans, Harry C., Delgat, Lynn, Verbeken, Annemieke, Lodge, D. Jean, Thanakitpipattana, Donnaya, Visagie, Cobus M., Rong, Isabel H., Andrade, Jackeline Pereira, Marbach, Phellippe Arthur Santos, De Souza, Jorge Teodoro, Malysheva, Ekaterina, Malysheva, Vera, Deschuyteneer, Daniel, Heykoop, Michel, Mata, Milagro, Rea, Abigail E., Smyth, Christopher W., Overton, Barrie E., Sewall, Brent J., Smith, Matthew E., Mujic, Alija, Bolin, Jason, Bessette, Arleen, Bessette, Alan, Kiran, Munazza, Khalid, Abdul Nasir, Khan, Junaid, Adamčík, Slavomír, Caboň, Miroslav, Liu, Fang, Cai, Lei, Tanney, Joey B., Seifert, Keith A., Baroncelli, Riccardo, Cafà, Giovanni, de Castro, Renata Rebellato Linhares, Boufleur, Thais, Junior, Nelson Sidnei Massola, Yilmaz, Neriman, Nováková, Alena, Švec, Karel, Sklenář, František, Kolařík, Miroslav, Kubátová, Alena, Rodríguez, Antonio, Navarro-Ródenas, Alfonso, Morte, Asunción, Cabero, Julio, Luque, Diego, Gonçalves, Micael F.M., Alves, Artur, Bordallo, Juan Julián, Pham, Thi Ha Giang, Popov, Eugene S., Iturrieta-González, Isabel, García, Dania, Ivanushkina, Nataliya E., Kochkina, Galina A., Vasilenko, Oleg V., and Ozerskaya, Svetlana M.

Subjects
ITS nrDNA barcodes, LSU, Fungal Planet description sheets, systematics, new taxa, Research Article
Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Apenidiella antarctica from permafrost, Cladosporium fildesense from an unidentified marine sponge. Argentina, Geastrum wrightii on humus in mixed forest. Australia, Golovinomyces glandulariae on Glandularia aristigera, Neoanungitea eucalyptorum on leaves of Eucalyptus grandis, Teratosphaeria corymbiicola on leaves of Corymbia ficifolia, Xylaria eucalypti on leaves of Eucalyptus radiata. Brazil, Bovista psammophila on soil, Fusarium awaxy on rotten stalks of Zea mays, Geastrum lanuginosum on leaf litter covered soil, Hermetothecium mikaniae-micranthae (incl. Hermetothecium gen. nov.) on Mikania micrantha, Penicillium reconvexovelosoi in soil, Stagonosporopsis vannaccii from pod of Glycine max. British Virgin Isles, Lactifluus guanensis on soil. Canada, Sorocybe oblongispora on resin of Picea rubens. Chile, Colletotrichum roseum on leaves of Lapageria rosea. China, Setophoma caverna from carbonatite in Karst cave. Colombia, Lareunionomyces eucalypticola on leaves of Eucalyptus grandis. Costa Rica, Psathyrella pivae on wood. Cyprus, Clavulina iris on calcareous substrate. France, Chromosera ambigua and Clavulina iris var. occidentalis on soil. French West Indies, Helminthosphaeria hispidissima on dead wood. Guatemala, Talaromyces guatemalensis in soil. Malaysia, Neotracylla pini (incl. Tracyllales ord. nov. and Neotracylla gen. nov.) and Vermiculariopsiella pini on needles of Pinus tecunumanii. New Zealand, Neoconiothyrium viticola on stems of Vitis vinifera, Parafenestella pittospori on Pittosporum tenuifolium, Pilidium novae-zelandiae on Phoenix sp. Pakistan, Russula quercus-floribundae on forest floor. Portugal, Trichoderma aestuarinum from saline water. Russia, Pluteus liliputianus on fallen branch of deciduous tree, Pluteus spurius on decaying deciduous wood or soil. South Africa, Alloconiothyrium encephalarti, Phyllosticta encephalarticola and Neothyrostroma encephalarti (incl. Neothyrostroma gen. nov.) on leaves of Encephalartos sp., Chalara eucalypticola on leaf spots of Eucalyptus grandis × urophylla, Clypeosphaeria oleae on leaves of Olea capensis, Cylindrocladiella postalofficium on leaf litter of Sideroxylon inerme, Cylindromonium eugeniicola (incl. Cylindromonium gen. nov.) on leaf litter of Eugenia capensis, Cyphellophora goniomatis on leaves of Gonioma kamassi, Nothodactylaria nephrolepidis (incl. Nothodactylaria gen. nov. and Nothodactylariaceae fam. nov.) on leaves of Nephrolepis exaltata, Falcocladium eucalypti and Gyrothrix eucalypti on leaves of Eucalyptus sp., Gyrothrix oleae on leaves of Olea capensis subsp. macrocarpa, Harzia metrosideri on leaf litter of Metrosideros sp., Hippopotamyces phragmitis (incl. Hippopotamyces gen. nov.) on leaves of Phragmites australis, Lectera philenopterae on Philenoptera violacea, Leptosillia mayteni on leaves of Maytenus heterophylla, Lithohypha aloicola and Neoplatysporoides aloes on leaves of Aloe sp., Millesimomyces rhoicissi (incl. Millesimomyces gen. nov.) on leaves of Rhoicissus digitata, Neodevriesia strelitziicola on leaf litter of Strelitzia nicolai, Neokirramyces syzygii (incl. Neokirramyces gen. nov.) on leaf spots of Syzygium sp., Nothoramichloridium perseae (incl. Nothoramichloridium gen. nov. and Anungitiomycetaceae fam. nov.) on leaves of Persea americana, Paramycosphaerella watsoniae on leaf spots of Watsonia sp., Penicillium cuddlyae from dog food, Podocarpomyces knysnanus (incl. Podocarpomyces gen. nov.) on leaves of Podocarpus falcatus, Pseudocercospora heteropyxidicola on leaf spots of Heteropyxis natalensis, Pseudopenidiella podocarpi, Scolecobasidium podocarpi and Ceramothyrium podocarpicola on leaves of Podocarpus latifolius, Scolecobasidium blechni on leaves of Blechnum capense, Stomiopeltis syzygii on leaves of Syzygium chordatum, Strelitziomyces knysnanus (incl. Strelitziomyces gen. nov.) on leaves of Strelitzia alba, Talaromyces clemensii from rotting wood in goldmine, Verrucocladosporium visseri on Carpobrotus edulis. Spain, Boletopsis mediterraneensis on soil, Calycina cortegadensisi on a living twig of Castanea sativa, Emmonsiellopsis tuberculata in fluvial sediments, Mollisia cortegadensis on dead attached twig of Quercus robur, Psathyrella ovispora on soil, Pseudobeltrania lauri on leaf litter of Laurus azorica, Terfezia dunensis in soil, Tuber lucentum in soil, Venturia submersa on submerged plant debris. Thailand, Cordyceps jakajanicola on cicada nymph, Cordyceps kuiburiensis on spider, Distoseptispora caricis on leaves of Carex sp., Ophiocordyceps khonkaenensis on cicada nymph. USA, Cytosporella juncicola and Davidiellomyces juncicola on culms of Juncus effusus, Monochaetia massachusettsianum from air sample, Neohelicomyces melaleucae and Periconia neobrittanica on leaves of Melaleuca styphelioides × lanceolata, Pseudocamarosporium eucalypti on leaves of Eucalyptus sp., Pseudogymnoascus lindneri from sediment in a mine, Pseudogymnoascus turneri from sediment in a railroad tunnel, Pulchroboletus sclerotiorum on soil, Zygosporium pseudomasonii on leaf of Serenoa repens. Vietnam, Boletus candidissimus and Veloporphyrellus vulpinus on soil. Morphological and culture characteristics are supported by DNA barcodes.

Published
2019

26. Polyporus tubaeformis (Basidiomycota, Polyporaceae) – identity, ecology and distribution in the Czech Republic, Austria, Slovakia and Ukraine

Author

Holec, Jan, Vampola, Petr, Kout, Jiří, Beran, M, Krisai-Greilhuber, I, Hahn, C, and Kolařík, M

Subjects
Bohemian Forest, Fungi, sequences, DNA, the Alps, the Carpathians
Abstract

Records of Polyporus tubaeformis are newly reported from the Czech Republic, Austria, Slovakia, and Ukraine. They originate from mountains at the elevation 750–1250 m a.s.l., namely Bohemian Forest, Northern Limestone Alps, Western and Eastern Carpathians. The habitats are a) steep rocky slopes above glacial lakes grown by natural montane Norway spruce forests with admixed Betula and Sorbus and b) valleys of montane brooks grown by shrubs or scattered mixed or spruce forests. Common features of the habitats are their near-natural to natural character, relatively cold climate and high air humidity and/or soil moisture. Basidiomata were found on wood or woody stems of broadleaved trees or shrubs: Alnus incana, Rubus idaeus, Rubus sp., Salix sp., Sorbus aucuparia, and Sorbus sp. Our data confirm P. tubaeformis as a species having predominantly boreal-montane distribution in Europe. Our collections belong to the European population of P. tubaeformis, which differs from the North American one in the ITS rDNA barcode. The separate species status of P. tubaeformis and Picipes subtubaeformis was confirmed by differences in ITS and LSU rDNA sequences. The revision of available molecular data showed that materials reported as P. tubaeformis from Japan represent other species. Consequently, records from temperate China and Russian Far East should be revised using molecular data.

Published
2021

27. Re-examination of species limits in Aspergillus section Flavipedes using advanced species delimitation methods and description of four new species

Author

Jurjević, Ž., primary, Houbraken, J., additional, Sklenář, F., additional, Kolařík, M., additional, Arendrup, M.C., additional, Jørgensen, K.M., additional, Siqueira, J.P.Z., additional, Gené, J., additional, Yaguchi, T., additional, Ezekiel, C.N., additional, Silva Pereira, C., additional, and Hubka, V., additional

Published
2021
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29. Draft genome sequence of Quambalaria eucalypti

Author

Wingfield, Brenda D., Liu, Miao, Nguyen, Hai D.T., Lane, Frances A., Morgan, Seamus W., De Vos, Lieschen, Wilken, P. Markus, Duong, Tuan A., Aylward, Janneke, Coetzee, Martin P.A., Dadej, Kasia, De Beer, Z. Wilhelm, Findlay, Wendy, Havenga, Minette, Kolařík, Miroslav, Menzies, Jim G., Naidoo, Kershney, Pochopski, Olivia, Shoukouhi, Parivash, Santana, Quentin C., Seifert, Keith A., Soal, Nicole, Steenkamp, Emma T., Tatham, Catherine T., van der Nest, Margriet A., Wingfield, Michael J., Nguyen, H.D.T., Findlay, W., Dadej, K., Pochopski, O., Shoukouhi, P., Menzies, J.G., Seifert, K.A., Kolařík, M., Liu, M., De Vos, L., Santana, Q.C., Wingfield, M.J., Wingfield, B.D., Steenkamp, E.T., Coetzee, M.P.A., Morgan, S.W., Duong, T. A., Coetzee, M., De Beer, Z.W., Lane, F.A., Tatham, C.T., Aylward, J., Havenga, M., Wilken, P.M., Duong, T.A., van der Nest, M.A., Soal, N., Naidoo, K., and de Beer, Z.W.

Subjects
Eucalyptus, pine pitch canker, chromosome numbers, Poaceae, Article, ergotism
Abstract

This genome announcement includes draft genomes from Claviceps purpurea s.lat., including C. arundinis, C. humidiphila and C. cf. spartinae. The draft genomes of Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, all three important eucalyptus pathogens, are presented. The insect associate Grosmannia galeiformis is also described. The pine pathogen genome of Fusarium circinatum has been assembled into pseudomolecules, based on additional sequence data and by harnessing the known synteny within the Fusarium fujikuroi species complex. This new assembly of the F. circinatum genome provides 12 pseudomolecules that correspond to the haploid chromosome number of F. circinatum. These are comparable to other chromosomal assemblies within the FFSC and will enable more robust genomic comparisons within this species complex.

Published
2018

33. Fungal Planet description sheets: 1042–1111

Author

Crous, P.W., primary, Wingfield, M.J., additional, Chooi, Y.-H., additional, Gilchrist, C.L.M., additional, Lacey, E., additional, Pitt, J.I., additional, Roets, F., additional, Swart, W.J., additional, Cano-Lira, J.F., additional, Valenzuela-Lopez, N., additional, Hubka, V., additional, Shivas, R.G., additional, Stchigel, A.M., additional, Holdom, D.G., additional, Jurjević, Ž., additional, Kachalkin, A.V., additional, Lebel, T., additional, Lock, C., additional, Martín, M.P., additional, Tan, Y.P., additional, Tomashevskaya, M.A., additional, Vitelli, J.S., additional, Baseia, I.G., additional, Bhatt, V.K., additional, Brandrud, T.E., additional, De Souza, J.T., additional, Dima, B., additional, Lacey, H.J., additional, Lombard, L., additional, Johnston, P.R., additional, Morte, A., additional, Papp, V., additional, Rodríguez, A., additional, Rodríguez-Andrade, E., additional, Semwal, K.C., additional, Tegart, L., additional, Abad, Z.G., additional, Akulov, A., additional, Alvarado, P., additional, Alves, A., additional, Andrade, J.P., additional, Arenas, F., additional, Asenjo, C., additional, Ballarà, J., additional, Barrett, M.D., additional, Berná, L.M., additional, Berraf-Tebbal, A., additional, Bianchinotti, M.V., additional, Bransgrove, K., additional, Burgess, T.I., additional, Carmo, F.S., additional, Chávez, R., additional, Čmoková, A., additional, Dearnaley, J.D.W., additional, Santiago, A.L.C.M. de A., additional, Freitas-Neto, J.F., additional, Denman, S., additional, Douglas, B., additional, Dovana, F., additional, Eichmeier, A., additional, Esteve-Raventós, F., additional, Farid, A., additional, Fedosova, A.G., additional, Ferisin, G., additional, Ferreira, R.J., additional, Ferrer, A., additional, Figueiredo, C.N., additional, Figueiredo, Y.F., additional, Reinoso-Fuentealba, C.G., additional, Garrido-Benavent, I., additional, Cañete-Gibas, C.F., additional, Gil-Durán, C., additional, Glushakova, A.M., additional, Gonçalves, M.F.M., additional, González, M., additional, Gorczak, M., additional, Gorton, C., additional, Guard, F.E., additional, Guarnizo, A.L., additional, Guarro, J., additional, Gutiérrez, M., additional, Hamal, P., additional, Hien, L.T., additional, Hocking, A.D., additional, Houbraken, J., additional, Hunter, G.C., additional, Inácio, C.A., additional, Jourdan, M., additional, Kapitonov, V.I., additional, Kelly, L., additional, Khanh, T.N., additional, Kisło, K., additional, Kiss, L., additional, Kiyashko, A., additional, Kolařík, M., additional, Kruse, J., additional, Kubátová, A., additional, Kučera, V., additional, Kučerová, I., additional, Kušan, I., additional, Lee, H.B., additional, Levicán, G., additional, Lewis, A., additional, Liem, N.V., additional, Liimatainen, K., additional, Lim, H.J., additional, Lyons, M.N., additional, Maciá-Vicente, J.G., additional, Magaña-Dueñas, V., additional, Mahiques, R., additional, Malysheva, E.F., additional, Marbach, P.A.S., additional, Marinho, P., additional, Matočec, N., additional, McTaggart, A.R., additional, Mešić, A., additional, Morin, L., additional, Muñoz-Mohedano, J.M., additional, Navarro-Ródenas, A., additional, Nicolli, C.P., additional, Oliveira, R.L., additional, Otsing, E., additional, Ovrebo, C.L., additional, Pankratov, T.A., additional, Paños, A., additional, Paz-Conde, A., additional, Pérez-Sierra, A., additional, Phosri, C., additional, Pintos, Á., additional, Pošta, A., additional, Prencipe, S., additional, Rubio, E., additional, Saitta, A., additional, Sales, L.S., additional, Sanhueza, L., additional, Shuttleworth, L.A., additional, Smith, J., additional, Smith, M.E., additional, Spadaro, D., additional, Spetik, M., additional, Sochor, M., additional, Sochorová, Z., additional, Sousa, J.O., additional, Suwannasai, N., additional, Tedersoo, L., additional, Thanh, H.M., additional, Thao, L.D., additional, Tkalčec, Z., additional, Vaghefi, N., additional, Venzhik, A.S., additional, Verbeken, A., additional, Vizzini, A., additional, Voyron, S., additional, Wainhouse, M., additional, Whalley, A.J.S., additional, Wrzosek, M., additional, Zapata, M., additional, Zeil-Rolfe, I., additional, and Groenewald, J.Z., additional

Published
2020
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34. Fungal Planet description sheets: 1042–1111

Author

Crous, P.W., Wingfield, M.J., Chooi, Y-H, Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., Groenewald, J.Z., Crous, P.W., Wingfield, M.J., Chooi, Y-H, Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., and Groenewald, J.Z.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects' frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocepha

Published
2020

35. Fungal Planet description sheets: 1042–1111

Author

Crous, P.W. (Pedro Willem), Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, (Tor Erik), De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Gloria Abad, Z., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., Groenewald, J.Z., Crous, P.W. (Pedro Willem), Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, (Tor Erik), De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Gloria Abad, Z., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., and Groenewald, J.Z.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects’ frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocepha

Published
2020
Full Text
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36. Fungal Planet 402 – 4 July 2016

Author

Crous, P.W., Wingfield, M.J., Richardson, D.M., Le Roux, J.J., Strasberg, D., Edwards, J., Roets, F., Hubka, V., Taylor, P.W.J., Heykoop, M., Martín, M.P., Moreno, G., Sutton, D.A., Wiederhold, N.P., Barnes, C.W., Carlavilla, J.R., Gené, J., Giraldo, A., Guarnaccia, V., Guarro, J., Hernández-Restrepo, M., Kolařík, M., Manjón, J.L., Pascoe, I.G., Popov, E.S., Sandoval-Denis, M., Woudenberg, J.H.C., Acharya, K., Alexandrova, A.V., Alvarado, P., Barbosa, R.N., Baseia, I.G., Blanchette, R.A., Boekhout, T., Burgess, T.I., Cano-Lira, J.F., Čmoková, A., Dimitrov, R.A., Dyakov, M.Yu., Dueñas, M., Dutta, A.K., Esteve-Raventós, F., Fedosova, A.G., Fournier, J., Gamboa, P., Gouliamova, D.E., Grebenc, T., Groenewald, M., Hanse, B., Hardy, G.E.St.J., Held, B.W., Jurjević, Ž., Kaewgrajang, T., Latha, K.P.D., Lombard, L., Luangsa-ard, J.J., Lysková, P., Mallátová, N., Manimohan, P., Miller, A.N., Mirabolfathy, M., Morozova, O.V., Obodai, M., Oliveira, N.T., Ordóñez, M.E., Otto, E.C., Paloi, S., Peterson, S.W., Phosri, C., Roux, J., Salazar, W.A., Sánchez, A., Sarria, G.A., Shin, H.-D., Silva, B.D.B., Silva, G.A., Smith, M.Th., Souza-Motta, C.M., Stchigel, A.M., Stoilova-Disheva, M.M., Sulzbacher, M.A., Telleria, M.T., Toapanta, C., Traba, J.M., Valenzuela-Lopez, N., Watling, R., Groenewald, J.Z., Crous, Pedro W., Groenewald, Johannes Z., Shin, Hyeon-Dong, Edwards, Jacqueline, Taylor, Paul W.J., Wingfield, Michael J., Guarnaccia, Vadimiro, Le Roux, Johannes J., Richardson, David M., Strasberg, Dominique, Pascoe, Ian G., Roets, Francois, Lombard, Lorenzo, Roux, Jolanda, Woudenberg, Joyce H.C., Mirabolfathy, Mansoureh, Hanse, Bram, Jurjević, Željko, Hubka, Vit, Peterson, Stephen W., Čmoková, Adéla, Lysková, Pavlína, Kolařík, Miroslav, Mallátová, Naïa, Martín, María P., Dueñas, Margarita, Telleria, M. Teresa, Silva, Bianca D.B., Baseia, Iuri G., Sulzbacher, Marcelo A., Grebenc, Tine, Otto, Eric C., Blanchette, Robert A., Held, Benjamin W., Barnes, Charles W., Obodai, Mary, Fedosova, Anna G., Popov, Eugene S., Sandoval-Denis, Marcelo, Gené, Josepa, Guarro, Josep, Sutton, Deanna A., Wiederhold, Nathan P., Kaewgrajang, Tharnrat, Phosri, Cherdchai, Watling, Roy, Moreno, Gabriel, Carlavilla, Juan Ramón, Heykoop, Michel, Manjón, José Luis, Gouliamova, Dilnora E., Stoilova-Disheva, Margarita M., Dimitrov, Roumen A., Smith, Maudy Th., Groenewald, Marizeth, Valenzuela-Lopez, Nicomedes, Stchigel, Alberto M., Cano-Lira, José F., Morozova, Olga V., Alexandrova, Alina V., Dyakov, Maxim Yu., Esteve-Raventós, Fernando, Alvarado, Pablo, Traba, José María, Hernández-Restrepo, Margarita, Sarria, Greicy Andrea, Salazar, Washington A., Ordóñez, Maria E., Toapanta, Cristina, Gamboa, Paul, Barbosa, Renan N., Silva, Gladstone A., Oliveira, Neiva T., Souza-Motta, Cristina M., Boekhout, Teun, Paloi, Soumitra, Dutta, Arun Kumar, Acharya, Krishnendu, Latha, K.P. Deepna, Manimohan, Patinjareveettil, Giraldo, Alejandra, Luangsa-ard, J. Jennifer, Burgess, Treena I., Hardy, Giles E.St.J., Miller, Andrew N., and Fournier, Jacques

Subjects
LSU, Fungal Planet description sheets, novel fungal species, ITS DNA barcodes, systematics, Research Article
Abstract

Novel species of fungi described in the present study include the following from Australia: Vermiculariopsiella eucalypti, Mulderomyces natalis (incl. Mulderomyces gen. nov.), Fusicladium paraamoenum, Neotrimmatostroma paraexcentricum, and Pseudophloeospora eucalyptorum on leaves of Eucalyptus spp., Anungitea grevilleae (on leaves of Grevillea sp.), Pyrenochaeta acaciae (on leaves of Acacia sp.), and Brunneocarpos banksiae (incl. Brunneocarpos gen. nov.) on cones of Banksia attenuata. Novel foliicolous taxa from South Africa include Neosulcatispora strelitziae (on Strelitzia nicolai), Colletotrichum ledebouriae (on Ledebouria floridunda), Cylindrosympodioides brabejum (incl. Cylindrosympodioides gen. nov.) on Brabejum stellatifolium, Sclerostagonospora ericae (on Erica sp.), Setophoma cyperi (on Cyperus sphaerocephala), and Phaeosphaeria breonadiae (on Breonadia microcephala). Novelties described from Robben Island (South Africa) include Wojnowiciella cissampeli and Diaporthe cissampeli (both on Cissampelos capensis), Phaeotheca salicorniae (on Salicornia meyeriana), Paracylindrocarpon aloicola (incl. Paracylindrocarpon gen. nov.) on Aloe sp., and Libertasomyces myopori (incl. Libertasomyces gen. nov.) on Myoporum serratum. Several novelties are recorded from La Réunion (France), namely Phaeosphaeriopsis agapanthi (on Agapanthus sp.), Roussoella solani (on Solanum mauritianum), Vermiculariopsiella acaciae (on Acacia heterophylla), Dothiorella acacicola (on Acacia mearnsii), Chalara clidemiae (on Clidemia hirta), Cytospora tibouchinae (on Tibouchina semidecandra), Diaporthe ocoteae (on Ocotea obtusata), Castanediella eucalypticola, Phaeophleospora eucalypticola and Fusicladium eucalypticola (on Eucalyptus robusta), Lareunionomyces syzygii (incl. Lareunionomyces gen. nov.) and Parawiesneriomyces syzygii (incl. Parawiesneriomyces gen. nov.) on leaves of Syzygium jambos. Novel taxa from the USA include Meristemomyces arctostaphylos (on Arctostaphylos patula), Ochroconis dracaenae (on Dracaena reflexa), Rasamsonia columbiensis (air of a hotel conference room), Paecilomyces tabacinus (on Nicotiana tabacum), Toxicocladosporium hominis (from human broncoalveolar lavage fluid), Nothophoma macrospora (from respiratory secretion of a patient with pneumonia), and Penidiellopsis radicularis (incl. Penidiellopsis gen. nov.) from a human nail. Novel taxa described from Malaysia include Prosopidicola albizziae (on Albizzia falcataria), Proxipyricularia asari (on Asarum sp.), Diaporthe passifloricola (on Passiflora foetida), Paramycoleptodiscus albizziae (incl. Paramycoleptodiscus gen. nov.) on Albizzia falcataria, and Malaysiasca phaii (incl. Malaysiasca gen. nov.) on Phaius reflexipetalus. Two species are newly described from human patients in the Czech Republic, namely Microascus longicollis (from toenails of patient with suspected onychomycosis), and Chrysosporium echinulatum (from sole skin of patient). Furthermore, Alternaria quercicola is described on leaves of Quercus brantii (Iran), Stemphylium beticola on leaves of Beta vulgaris (The Netherlands), Scleroderma capeverdeanum on soil (Cape Verde Islands), Scleroderma dunensis on soil, and Blastobotrys meliponae from bee honey (Brazil), Ganoderma mbrekobenum on angiosperms (Ghana), Geoglossum raitviirii and Entoloma kruticianum on soil (Russia), Priceomyces vitoshaensis on Pterostichus melas (Carabidae) (Bulgaria) is the only one for which the family is listed, Ganoderma ecuadoriense on decaying wood (Ecuador), Thyrostroma cornicola on Cornus officinalis (Korea), Cercophora vinosa on decorticated branch of Salix sp. (France), Coprinus pinetorum, Coprinus littoralis and Xerocomellus poederi on soil (Spain). Two new genera from Colombia include Helminthosporiella and Uwemyces on leaves of Elaeis oleifera. Two species are described from India, namely Russula intervenosa (ectomycorrhizal with Shorea robusta), and Crinipellis odorata (on bark of Mytragyna parviflora). Novelties from Thailand include Cyphellophora gamsii (on leaf litter), Pisolithus aureosericeus and Corynascus citrinus (on soil). Two species are newly described from Citrus in Italy, namely Dendryphiella paravinosa on Citrus sinensis, and Ramularia citricola on Citrus floridana. Morphological and culture characteristics along with ITS nrDNA barcodes are provided for all taxa.

Published
2016

38. Fungal Planet 725 – 13 July 2018

Author

Crous, P.W., Wingfield, M.J., Burgess, T.I., Hardy, G.E.St.J., Gené, J., Guarro, J., Baseia, I.G., García, D., Gusmão, L.F.P., Souza-Motta, C.M., Thangavel, R., Adamčík, S., Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., de Oliveira, R.J.V., Ercole, E., Hubka, V., Iturrieta-González, I., Kubátová, A., Martín, M.P., Moreau, P.-A., Morte, A., Ordoñez, M.E., Rodríguez, A., Stchigel, A.M., Vizzini, A., Abdollahzadeh, J., Abreu, V.P., Adamčíková, K., Albuquerque, G.M.R., Alexandrova, A.V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R.N., Bellanger, J.-M., Bezerra, J.L., Cabral, T.S., Caboň, M., Caicedo, E., Cantillo, T., Carnegie, A.J., Carmo, L.T., Castañeda-Ruiz, R.F., Clement, C.R., Čmoková, A., Conceição, L.B., Cruz, R.H.S.F., Damm, U., da Silva, B.D.B., da Silva, G.A., da Silva, R.M.F., de A. Santiago, A.L.C.M., de Oliveira, L.F., de Souza, C.A.F., Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C.R., Fournier, J., Gibertoni, T.B., Hosaka, K., Iturriaga, T., Jadan, M., Jany, J.-L., Jurjević, Ž., Kolařík, M., Kušan, I., Landell, M.F., Leite Cordeiro, T.R., Lima, D.X., Loizides, M., Luo, S., Machado, A.R., Madrid, H., Magalhães, O.M.C., Marinho, P., Matočec, N., Mešić, A., Miller, A.N., Morozova, O.V., Neves, R.P., Nonaka, K., Nováková, A., Oberlies, N.H., Oliveira-Filho, J.R.C., Oliveira, T.G.L., Papp, V., Pereira, O.L., Perrone, G., Peterson, S.W., Pham, T.H.G., Raja, H.A., Raudabaugh, D.B., Řehulka, J., Rodríguez-Andrade, E., Saba, M., Schauflerová, A., Shivas, R.G., Simonini, G., Siqueira, J.P.Z., Sousa, J.O., Stajsic, V., Svetasheva, T., Tan, Y.P., Tkalčec, Z., Ullah, S., Valente, P., Valenzuela-Lopez, N., Abrinbana, M., Viana Marques, D.A., Wong, P.T.W., Xavier de Lima, V., Groenewald, J.Z., Giang, Pham Thi Ha, Alexandrova, Alina V., Morozova, Olga V., Valenzuela-Lopez, Nicomedes, Stchigel, Alberto M., Guarro, Josep, Cano-Lira, José F., Nováková, Alena, Kolařík, Miroslav, Siqueira, João Paulo Zen, Gené, Josepa, García, Dania, de Oliveira, Luiz F., Viana Marques, Daniela de A., Barbosa, Renan N., Albuquerque, Greicilene M.R., Souza-Motta, Cristina M., Vizzini, Alfredo, Ercole, Enrico, Svetasheva, Tatyana, Simonini, Giampaolo, Iturrieta-González, Isabel, Damm, Ulrike, Crous, Pedro W., Luo, Shuming, Dong, Gina, Wong, Percy T.W., Mešić, Armin, Tkalčec, Zdenko, Kušan, Ivana, Matočec, Neven, Jadan, Margita, Oliveira, Thays G.L., Bezerra, Jadson D.P., Machado, Alexandre R., Magalhães, Oliane M.C., Rodríguez-Andrade, Ernesto, Ordoñez, Maria E., Barili, Alessio, Barnes, Charles W., Madrid, Hugo, de Lima, Vitor Xavier, Oliveira-Filho, José Ribamar C., Gibertoni, Tatiana B., Sousa, Julieth O., da Silva, Bianca D.B., Marinho, Paulo, Martín, María P., Baseia, Iuri G., Loizides, Michael, Moreau, Pierre-Arthur, Bellanger, Jean-Michel, Raudabaugh, Daniel B., Iturriaga, Teresa, Miller, Andrew N., Hubka, Vit, Kubátová, Alena, Nonaka, Kenichi, Čmoková, Adéla, Řehulka, Jiří, Schauflerová, Adéla, Déniel, Franck, Jany, Jean-Luc, Raja, Huzefa A., Oberlies, Nicholas H., Fournier, Jacques, Adamčík, Slavomír, Adamčíková, Katarína, Duarte, Eduardo Álvarez, Conceição, Lucas B., Gusmão, Luís F.P., Castañeda-Ruiz, Rafael F., Abreu, Vanessa P., Pereira, Olinto L., de Souza, Carlos A.F., Leite Cordeiro, Thalline R., Lima, Diogo X., de Oliveira, Rafael J.V., de A. Santiago, André Luiz C.M., Cruz, Rhudson H.S.F., Gusmão, Luis F.P., Carmo, Luana T., Dima, Bálint, Papp, Viktor, da Silva, Rejane M.F., Bezerra, José L., da Silva, Gladstone A., Félix, Ciro R., Landell, Melissa F., Valente, Patricia, Neves, Rejane P., Cantillo, Taimy, Caboň, Miroslav, Saba, Malka, Ullah, Sadiq, Caicedo, Erika, Jurjević, Željko, Peterson, Stephen W., Perrone, Giancarlo, Julián Bordallo, Juan, Rodríguez, Antonio, Morte, Asunción, Stajsic, Val, Tan, Yu Pei, Edwards, Jacqueline, Shivas, Roger G., Bordallo, Juan Julián, Cabral, Tiara S., Clement, Charles R., Hosaka, Kentaro, Abrinbana, Masoud, Abdollahzadeh, Jafar, Groenewald, Johannes Z., Wingfield, Michael J., Burgess, Treena I., Hardy, Giles E.St.J., Thangavel, Raja, Carnegie, Angus J., Armstrong-Cho, Cheryl, Banniza, Sabine, Westerdijk Fungal Biodiversity Institute, Westerdijk Fungal Biodiversity Institute - Evolutionary Phytopathology, Russian Academy of Sciences, Russian Science Foundation, Universidade de Pernambuco, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco, Fundação de Amparo à Pesquisa do Estado de São Paulo Minas Gerais, Instituto Chico Mendes de Conservação da Biodiversidade (Brasil), Fundação Cultural Palmares, Secretaría de Educación Superior, Ciencia, Tecnología e Innovación (Ecuador), Pontificia Universidad Católica del Ecuador, Comisión Nacional de Investigación Científica y Tecnológica (Chile), Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), Charles University (Czech Republic), Ministry of Health of the Czech Republic, Slovak-American Foundation, VEGA Agency (Slovakia), Higher Education Commission (Pakistan), Ministry of Education, Youth and Sports (Czech Republic), European Commission, Fundación Séneca, Ministerio de Economía y Competitividad (España), Pennsylvania Department of Conservation and Natural Resources, Mycological Society of America, University of Illinois, Ministry of Agriculture (Government of Saskatchewan, Canada), Western Grains Research Foundation, Herb, Spice and Specialty Agriculture Association (Canada), Saskatchewan Crop Insurance Corporation, Martín, María P. [0000-0002-1235-4418], Martín, María P., and Naturalis journals & series

Subjects
0301 basic medicine, ITS nrDNA barcodes, LSU, ITS nrDNA barcodes, LSU, new taxa, systematics, biology, Fungal Planet description sheets: 716–784, Eucalyptus obliqua, Eucalyptus sieberi, Eucalyptus maidenii, 030108 mycology & parasitology, Plant litter, biology.organism_classification, Eucalyptus, Corynespora, New taxa, Systematics, Eucalyptus pellita, 03 medical and health sciences, Botany, Elaeocarpus, Ecology, Evolution, Behavior and Systematics, Research Article
Abstract

Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetopsina eucalypti on Eucalyptus leaf litter, Colletotrichum cobbittiense from Cordyline stricta × C. australis hybrid, Cyanodermella banksiae on Banksia ericifolia subsp. macrantha, Discosia macrozamiae on Macrozamia miquelii, Elsinoë banksiigena on Banksia marginata, Elsinoë elaeocarpi on Elaeocarpus sp., Elsinoë leucopogonis on Leucopogon sp., Helminthosporium livistonae on Livistona australis, Idriellomyces eucalypti (incl. Idriellomyces gen. nov.) on Eucalyptus obliqua, Lareunionomyces eucalypti on Eucalyptus sp., Myrotheciomyces corymbiae (incl. Myrotheciomyces gen. nov., Myrotheciomycetaceae fam. nov.), Neolauriomyces eucalypti (incl. Neolauriomyces gen. nov., Neolauriomycetaceae fam. nov.) on Eucalyptus sp., Nullicamyces eucalypti (incl. Nullicamyces gen. nov.) on Eucalyptus leaf litter, Oidiodendron eucalypti on Eucalyptus maidenii, Paracladophialophora cyperacearum (incl. Paracladophialophoraceae fam. nov.) and Periconia cyperacearum on leaves of Cyperaceae, Porodiplodia livistonae (incl. Porodiplodia gen. nov., Porodiplodiaceae fam. nov.) on Livistona australis, Sporidesmium melaleucae (incl. Sporidesmiales ord. nov.) on Melaleuca sp., Teratosphaeria sieberi on Eucalyptus sieberi, Thecaphora australiensis in capsules of a variant of Oxalis exilis. Brazil, Aspergillus serratalhadensis from soil, Diaporthe pseudoinconspicua from Poincianella pyramidalis, Fomitiporella pertenuis on dead wood, Geastrum magnosporum on soil, Marquesius aquaticus (incl. Marquesius gen. nov.) from submerged decaying twig and leaves of unidentified plant, Mastigosporella pigmentata from leaves of Qualea parviflorae, Mucor souzae from soil, Mycocalia aquaphila on decaying wood from tidal detritus, Preussia citrullina as endophyte from leaves of Citrullus lanatus, Queiroziella brasiliensis (incl. Queiroziella gen. nov.) as epiphytic yeast on leaves of Portea leptantha, Quixadomyces cearensis (incl. Quixadomyces gen. nov.) on decaying bark, Xylophallus clavatus on rotten wood., Canada, Didymella cari on Carum carvi and Coriandrum sativum. Chile, Araucasphaeria foliorum (incl. Araucasphaeria gen. nov.) on Araucaria araucana, Aspergillus tumidus from soil, Lomentospora valparaisensis from soil. Colombia, Corynespora pseudocassiicola on Byrsonima sp., Eucalyptostroma eucalyptorum on Eucalyptus pellita, Neometulocladosporiella eucalypti (incl. Neometulocladosporiella gen. nov.) on Eucalyptus grandis × urophylla, Tracylla eucalypti (incl. Tracyllaceae fam. nov., Tracyllalales ord. nov.) on Eucalyptus urophylla. Cyprus, Gyromitra anthracobia (incl. Gyromitra subg. Pseudoverpa) on burned soil. Czech Republic, Lecanicillium restrictum from the surface of the wooden barrel, Lecanicillium testudineum from scales of Trachemys scripta elegans. Ecuador, Entoloma yanacolor and Saproamanita quitensis on soil. France, Lentithecium carbonneanum from submerged decorticated Populus branch. Hungary, Pleuromyces hungaricus (incl. Pleuromyces gen. nov.) from a large Fagus sylvatica log. Iran, Zymoseptoria crescenta on Aegilops triuncialis. Malaysia, Ochroconis musicola on Musa sp. Mexico, Cladosporium michoacanense from soil. New Zealand , Acrodontium metrosideri on Metrosideros excelsa, Polynema podocarpi on Podocarpus totara, Pseudoarthrographis phlogis (incl. Pseudoarthrographis gen. nov.) on Phlox subulata. Nigeria, Coprinopsis afrocinerea on soil. Pakistan, Russula mansehraensis on soil under Pinus roxburghii. Russia, Baorangia alexandri on soil in deciduous forests with Quercus mongolica. South Africa, Didymocyrtis brachylaenae on Brachylaena discolor. Spain, Alfaria dactylis from fruit of Phoenix dactylifera, Dothiora infuscans from a blackened wall, Exophiala nidicola from the nest of an unidentified bird, Matsushimaea monilioides from soil, Terfezia morenoi on soil. United Arab Emirates, Tirmania honrubiae on soil. USA, Arxotrichum wyomingense (incl. Arxotrichum gen. nov.) from soil, Hongkongmyces snookiorum from submerged detritus from a fresh water fen, Leratiomyces tesquorum from soil, Talaromyces tabacinus on leaves of Nicotiana tabacum. Vietnam, Afroboletus vietnamensis on soil in an evergreen tropical forest, Colletotrichum condaoense from Ipomoea pes-caprae. Morphological and culture characteristics along with DNA barcodes are provided., The study of Olga V. Morozova and Tatiana Yu. Svetasheva was carried out within the framework of an institutional research project of the Komarov Botanical Institute RAS ‘Biodiversity and spatial structure of fungi and myxomycetes communities in natural and anthropogenic ecosystems’ (АААА-А18-118031290108-6) using equipment of its Core Facility Center ‘Cell and Molecular Technologies in Plant Science’. Alina V. Alexandrova acknowledges financial support from the Russian Science Foundation (project N 14-50-00029)., Daniela de A. Viana Marques acknowledges Universidade de Pernambuco for financial support. Jan Borovička is thanked for providing the Portuguese collection of Baorangia emileorum and its ITS and LSU sequences, and Alessia Tatti for sending the Sardinian collections of B. emileorum. Taimy Cantillo, Luis F.P. Gusmão, Luana T. do Carmo, Lucas B. Conceição, Julieth O. Sousa, Luiz F. de Oliveira, Renan N. Barbosa, Rhudson H.S.F. Cruz, André L.C.M. de A. Santiago, Carlos A.F. de Souza, Diogo X. Lima, Rafael J.V. de Oliveira and Thalline R.L. Cordeiro, Olinto L. Pereira, Rejane M.F. Silva, Rafael J.V. Oliveira, José L. Bezerra, Gladstone A. Silva Ciro R. Félix, Melissa F. Landell, Thays G.L. Oliveira, Jadson D.P. Bezerra, Alexandre R. Machado, Cristina M. Souza-Motta and Oliane M. C. Magalhães, Tatiana B. Gibertoni, Vitor Xavier de Lima and José R. C. Oliveira-Filho acknowledge financial support and/or scholarships from the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES), the Conselho Nacional do Desenvolvimento Científico e Tecnológico (CNPq) and the Fundação de Amparo à Ciência e Tecnologia de Pernambuco (FACEPE); the Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG), the Instituto Chico Mendes de Conservação da Biodiversidade (ICMBio), Parque Memorial Zumbi dos Palmares and Usina Caeté – Grupo Carlos Lyra and Nordesta AS for suport during field trips., Maria E. Ordoñez and colleagues acknowledge the Secretaria de Educación Superior, Ciencia, Tecnología e Innovación del Ecuador (SENESCYT), Arca de Noé Initiative, and the Pontificia Universidad Católica del Ecuador, project N13415 for financial support. Hugo Madrid was partially funded by Comisión Nacional de Investigación Científica y Tecnológica (CONICYT), Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT), Chile, project no. 11140562. Vit Hubka and colleagues express their gratitude to Marek Kiecoň, Pavel Malík and Tereza Krasnokutská (National Heritage Institute) for providing information on archaeological research; Hana Rajhelová (Silesian University in Opava) and Jitka Koubková (Veterinary Laboratory Labvet) for providing photo documentation and material for mycological examinations; Czechoslovak Microscopy Society for support (CSMS scholarship 2016). The research of V. Hubka was supported by Charles University Research Centre program No. 204069 and the grant of the Czech Ministry of Health (AZV 17-31269A). Alfredo Vizzini and colleagues thank Jan Holec for administering of the loan of European material from PRM herbarium (Prague, Czech Republic). Soňa Jančovičová helped with the line drawings. Jozef Šibík and David Cooper are acknowledged for the support during the field collections in Colorado (USA) that was financed by the Slovak American Foundation., The sequencing of samples was funded by the Slovak national project Vega 02/0018/18. Željko Jurjević acknowledges Filomena Epifani and Sammy Sedky for their excellent technical support. Malka Saba acknowledges the Higher Education Commission (HEC), Islamabad, Pakistan, for financial assistance during field trips in Pakistan and the Slovak national project APVV-15-0210 for sequencing of Russula mansehraensis. The research of Alena Nováková and Miroslav Kolařík was supported by the Ministry of Education, Youth and Sports of the Czech Republic (grant number LO1509). Asunción Morte, Juan Julián Bordallo and Antonio Rodríguez were supported by projects 19484/PI/14 (FEDER and Fundación Séneca - Agencia de Ciencia y Tecnología de la Región de Murcia, Spain) and CGL2016-78946-R (AEI and FEDER, UE); they also thank Aurelio Garcia Blanco, Andries Gouws, Tom de Wet, Ali Hassan and Faisal Abdullab for their observations and assistance with field work. Daniel B. Raudabaugh and colleagues thank the Commonwealth of Pennsylvania, Pennsylvania Department of Conservation and Natural Resources, Pennsylvania Bureau of State Parks, and Black Moshannon State Park for research support, the Mycological Society of America and University of Illinois Urbana-Champaign School of Integrative Biology for financial support, and Michael Woodley for field support. Cheryl Armstrong-Cho and Sabine Banniza acknowledge funding and support by the Saskatchewan Ministry of Agriculture, the Western Grains Research Foundation, the Herb, Spice and Specialty Agriculture Association and the Saskatchewan Crop Insurance Corporation. Shuming Luo and colleagues thank Mui-keng Tan for helpful advice during this study.

Published
2018
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39. Fungal Planet description sheets: 951-1041

Author

Crous, P.W., Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsa-ard, J., Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., De la Peña-Lastra, S., García, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E., Malysheva, V., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamčík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araujo, R.V.B., Bordallo, J.J., Bonfleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., M. Caboň, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., de Castro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, H.C., Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L.V., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I., Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massola Jr, N.S., Mata, M., Miller, A.N., Mongkolsamrit, S., Moreau, P.-A., Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó., Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklenář, F., Smith, J.A., Sousa, J.O., Souza, H.G., De Souza, J.T., Švec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., van Iperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, Ž., Groenewald, J.Z., Crous, P.W., Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsa-ard, J., Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., De la Peña-Lastra, S., García, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E., Malysheva, V., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamčík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araujo, R.V.B., Bordallo, J.J., Bonfleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., M. Caboň, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., de Castro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, H.C., Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L.V., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I., Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massola Jr, N.S., Mata, M., Miller, A.N., Mongkolsamrit, S., Moreau, P.-A., Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó., Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklenář, F., Smith, J.A., Sousa, J.O., Souza, H.G., De Souza, J.T., Švec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., van Iperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, Ž., and Groenewald, J.Z.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Apenidiella antarctica from permafrost, Cladosporium fildesense from an unidentified marine sponge. Argentina, Geastrum wrightii on humus in mixed forest. Australia, Golovinomyces glandulariae on Glandularia aristigera, Neoanungitea eucalyptorum on leaves of Eucalyptus grandis, Teratosphaeria corymbiicola on leaves of Corymbia ficifolia, Xylaria eucalypti on leaves of Eucalyptus radiata. Brazil, Bovista psammophila on soil, Fusarium awaxy on rotten stalks of Zea mays, Geastrum lanuginosum on leaf litter covered soil, Hermetothecium mikaniae-micranthae (incl. Hermetothecium gen. nov.) on Mikania micrantha, Penicillium reconvexovelosoi in soil, Stagonosporopsis vannaccii from pod of Glycine max. British Virgin Isles, Lactifluus guanensis on soil. Canada, Sorocybe oblongispora on resin of Picea rubens. Chile, Colletotrichum roseum on leaves of Lapageria rosea. China, Setophoma caverna from carbonatite in Karst cave. Colombia, Lareunionomyces eucalypticola on leaves of Eucalyptus grandis. Costa Rica, Psathyrella pivae on wood. Cyprus, Clavulina iris on calcareous substrate. France, Chromosera ambigua and Clavulina iris var. occidentalis on soil. French West Indies, Helminthosphaeria hispidissima on dead wood. Guatemala, Talaromyces guatemalensis in soil. Malaysia, Neotracylla pini (incl. Tracyllales ord. nov. and Neotracylla gen. nov.) and Vermiculariopsiella pini on needles of Pinus tecunumanii. New Zealand, Neoconiothyrium viticola on stems of Vitis vinifera

Published
2019

40. Fungal Planet description sheets: 951–1041

Author

Crous, P.W. (Pedro Willem), Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsa-ard, J.J. (Janet), Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., Delapeña-Lastra, S., Garcia, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E.F., Malysheva, V.F., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araújo, R.V.B., Bordallo, J.J., Boufleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., Cabo, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., Decastro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, (Harry C.), Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I. (Isabel), Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massolajr, N.S., Mata, (M. ), Miller, A.N., Mongkolsamrit, S., Moreau, P.-A. (Pierre-Arthur), Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó, Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklená, F., Smith, J.A., Sousa, J.O., Souza, H.G., Desouza, J.T., Vec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., Vaniperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, ( Ž. ), Groenewald, J.Z., Crous, P.W. (Pedro Willem), Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsa-ard, J.J. (Janet), Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., Delapeña-Lastra, S., Garcia, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E.F., Malysheva, V.F., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araújo, R.V.B., Bordallo, J.J., Boufleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., Cabo, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., Decastro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, (Harry C.), Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I. (Isabel), Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massolajr, N.S., Mata, (M. ), Miller, A.N., Mongkolsamrit, S., Moreau, P.-A. (Pierre-Arthur), Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó, Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklená, F., Smith, J.A., Sousa, J.O., Souza, H.G., Desouza, J.T., Vec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., Vaniperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, ( Ž. ), and Groenewald, J.Z.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Antarctica, Apenidiella antarctica from permafrost, Cladosporium fildesense from an unidentified marine sponge. Argentina, Geastrum wrightii on humus in mixed forest. Australia, Golovinomyces glandulariae on Glandularia aristigera, Neoanungitea eucalyptorum on leaves of Eucalyptus grandis, Teratosphaeria corymbiicola on leaves of Corymbia ficifolia, Xylaria eucalypti on leaves of Eucalyptus radiata. Brazil, Bovista psammophila on soil, Fusarium awaxy on rotten stalks of Zea mays, Geastrum lanuginosum on leaf litter covered soil, Hermetothecium mikaniae-micranthae (incl. Hermetothecium gen. nov.) on Mikania micrantha, Penicillium reconvexovelosoi in soil, Stagonosporopsis vannaccii from pod of Glycine max. British Virgin Isles, Lactifluus guanensis on soil. Canada, Sorocybe oblongispora on resin of Picea rubens. Chile, Colletotrichum roseum on leaves of Lapageria rosea. China, Setophoma caverna from carbonatite in Karst cave. Colombia, Lareunionomyces eucalypticola on leaves of Eucalyptus grandis. Costa Rica, Psathyrella pivae on wood. Cyprus, Clavulina iris on calcareous substrate. France, Chromosera ambigua and Clavulina iris var. occidentalis on soil. French West Indies, Helminthosphaeria hispidissima on dead wood. Guatemala, Talaromyces guatemalensis in soil. Malaysia, Neotracylla pini (incl. Tracyllales ord. nov. and Neotracylla gen. nov.) and Vermiculariopsiella pini on needles of Pinus tecunumanii. New Zealand, Neoconiothyrium viticola on stems of Vitis vinifera, Parafenestella pittospori on Pittosporum tenuifolium, Pilidium novae-zelandiae on Phoenix sp. Pakistan, Russula quercus-floribundae on forest floor. Portugal, Trichoderma aestuarinum from saline water. Russia, Pluteus liliputianus on fallen branch of deciduous tree, Pluteus spurius on decaying deciduous wood or soil. South Africa, Alloconiothyrium encephalarti, Phyllosticta encephalarticola and Neothyrostro

Published
2019
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41. Unravelling species boundaries in theAspergillus viridinutans complex (sectionFumigati): opportunistic human and animal pathogens capable of interspecific hybridization

Author

Hubka, V., primary, Barrs, V., additional, Dudová, Z., additional, Sklenář, F., additional, Kubátová, A., additional, Matsuzawa, T., additional, Yaguchi, T., additional, Horie, Y., additional, Nováková, A., additional, Frisvad, J.C., additional, Talbot, J.J., additional, and Kolařík, M., additional

Published
2018
Full Text
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42. Fungal Planet description sheets: 716–784

Author

Crous, P.W., primary, Wingfield, M.J., additional, Burgess, T.I., additional, Hardy, G.E.St.J., additional, Gené, J., additional, Guarro, J., additional, Baseia, I.G., additional, García, D., additional, Gusmão, L.F.P., additional, Souza-Motta, C.M., additional, Thangavel, R., additional, Adamčík, S., additional, Barili, A., additional, Barnes, C.W., additional, Bezerra, J.D.P., additional, Bordallo, J.J., additional, Cano-Lira, J.F., additional, de Oliveira, R.J.V., additional, Ercole, E., additional, Hubka, V., additional, Iturrieta-González, I., additional, Kubátová, A., additional, Martín, M.P., additional, Moreau, P.-A., additional, Morte, A., additional, Ordoñez, M.E., additional, Rodríguez, A., additional, Stchigel, A.M., additional, Vizzini, A., additional, Abdollahzadeh, J., additional, Abreu, V.P., additional, Adamčíková, K., additional, Albuquerque, G.M.R., additional, Alexandrova, A.V., additional, Álvarez Duarte, E., additional, Armstrong-Cho, C., additional, Banniza, S., additional, Barbosa, R.N., additional, Bellanger, J.-M., additional, Bezerra, J.L., additional, Cabral, T.S., additional, Caboň, M., additional, Caicedo, E., additional, Cantillo, T., additional, Carnegie, A.J., additional, Carmo, L.T., additional, Castañeda-Ruiz, R.F., additional, Clement, C.R., additional, Čmoková, A., additional, Conceição, L.B., additional, Cruz, R.H.S.F., additional, Damm, U., additional, da Silva, B.D.B., additional, da Silva, G.A., additional, da Silva, R.M.F., additional, Santiago, A.L.C.M. de A., additional, de Oliveira, L.F., additional, de Souza, C.A.F., additional, Déniel, F., additional, Dima, B., additional, Dong, G., additional, Edwards, J., additional, Félix, C.R., additional, Fournier, J., additional, Gibertoni, T.B., additional, Hosaka, K., additional, Iturriaga, T., additional, Jadan, M., additional, Jany, J.-L., additional, Jurjević, Ž., additional, Kolařík, M., additional, Kušan, I., additional, Landell, M.F., additional, Leite Cordeiro, T.R., additional, Lima, D.X., additional, Loizides, M., additional, Luo, S., additional, Machado, A.R., additional, Madrid, H., additional, Magalhães, O.M.C., additional, Marinho, P., additional, Matočec, N., additional, Mešić, A., additional, Miller, A.N., additional, Morozova, O.V., additional, Neves, R.P., additional, Nonaka, K., additional, Nováková, A., additional, Oberlies, N.H., additional, Oliveira-Filho, J.R.C., additional, Oliveira, T.G.L., additional, Papp, V., additional, Pereira, O.L., additional, Perrone, G., additional, Peterson, S.W., additional, Pham, T.H.G., additional, and Raja, H.A., additional

Published
2018
Full Text
View/download PDF

43. Fungal Planet description sheets: 716–784

Author

Crous, P.W., Wingfield, M.J., Burgess, T.I., Hardy, G.E.St.J., Gené, J., Guarro, J., Baseia, I.G., Garcia, D., Gusmao, L.F.P., Souza-Motta, C.M., Thangavel, R., Adamčík, S., Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., de Oliveira, R.J.V., Ercole, E., Hubka, V., Iturrieta-González, I., Kubátová, A., Martín, M.P., Moreau, P-A, Morte, A., Ordoñez, M.E., Rodríguez, A., Stchigel, A.M., Vizzini, A., Abdollahzadeh, J., Abreu, V.P, Adamčíková, K., Albuquerque, G.M.R., Alexandrova, A.V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R.N., Bellanger, J-M, Bezerra, J.L., Cabral, T.S., Caboň, M., Caicedo, E., Cantillo, T., Carnegie, A.J., Carmo, L.T., Castañeda-Ruiz, R.F., Clement, C.R., Čmoková, A., Conceição, L.B., Cruz, R.H.S.F., Damm, U., da Silva, B.D.B., da Silva, G.A., da Silva, R.M.F., Santiago, A.L.C.M. de A., de Oliveira, L.F., de Souza, C.A.F., Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C.R., Fournier, J., Gibertoni, T.B., Hosaka, K., Iturriaga, T., Jadan, M., Jany, J-L, Jurjević, Ž., Kolařík, M., Kušan, I., Landell, M.F., Leite Cordeiro, T.R., Lima, D.X., Loizides, M., Luo, S., Machado, A.R., Madrid, H., Magalhães, O.M.C., Marinho, P., Matočec, N., Mešić, A., Miller, A.N., Morozova, O.V., Neves, R.P., Nonaka, K., Nováková, A., Oberlies, N.H., Oliveira-Filho, J.R.C., Oliveira, T.G.L., Papp, V., Pereira, O.L., Perrone, G., Peterson, S.W., Pham, T.H.G., Raja, H.A., Crous, P.W., Wingfield, M.J., Burgess, T.I., Hardy, G.E.St.J., Gené, J., Guarro, J., Baseia, I.G., Garcia, D., Gusmao, L.F.P., Souza-Motta, C.M., Thangavel, R., Adamčík, S., Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., de Oliveira, R.J.V., Ercole, E., Hubka, V., Iturrieta-González, I., Kubátová, A., Martín, M.P., Moreau, P-A, Morte, A., Ordoñez, M.E., Rodríguez, A., Stchigel, A.M., Vizzini, A., Abdollahzadeh, J., Abreu, V.P, Adamčíková, K., Albuquerque, G.M.R., Alexandrova, A.V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R.N., Bellanger, J-M, Bezerra, J.L., Cabral, T.S., Caboň, M., Caicedo, E., Cantillo, T., Carnegie, A.J., Carmo, L.T., Castañeda-Ruiz, R.F., Clement, C.R., Čmoková, A., Conceição, L.B., Cruz, R.H.S.F., Damm, U., da Silva, B.D.B., da Silva, G.A., da Silva, R.M.F., Santiago, A.L.C.M. de A., de Oliveira, L.F., de Souza, C.A.F., Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C.R., Fournier, J., Gibertoni, T.B., Hosaka, K., Iturriaga, T., Jadan, M., Jany, J-L, Jurjević, Ž., Kolařík, M., Kušan, I., Landell, M.F., Leite Cordeiro, T.R., Lima, D.X., Loizides, M., Luo, S., Machado, A.R., Madrid, H., Magalhães, O.M.C., Marinho, P., Matočec, N., Mešić, A., Miller, A.N., Morozova, O.V., Neves, R.P., Nonaka, K., Nováková, A., Oberlies, N.H., Oliveira-Filho, J.R.C., Oliveira, T.G.L., Papp, V., Pereira, O.L., Perrone, G., Peterson, S.W., Pham, T.H.G., and Raja, H.A.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetopsina eucalypti on Eucalyptus leaf litter, Colletotrichum cobbittiense from Cordyline stricta × C. australis hybrid, Cyanodermella banksiae on Banksia ericifolia subsp. macrantha, Discosia macrozamiae on Macrozamia miquelii, Elsinoë banksiigena on Banksia marginata, Elsinoë elaeocarpi on Elaeocarpus sp., Elsinoë leucopogonis on Leucopogon sp., Helminthosporium livistonae on Livistona australis, Idriellomyces eucalypti (incl. Idriellomyces gen. nov.) on Eucalyptus obliqua, Lareunionomyces eucalypti on Eucalyptus sp., Myrotheciomyces corymbiae (incl. Myrotheciomyces gen. nov., Myrotheciomycetaceae fam. nov.), Neolauriomyces eucalypti (incl. Neolauriomyces gen. nov., Neolauriomycetaceae fam. nov.) on Eucalyptus sp., Nullicamyces eucalypti (incl. Nullicamyces gen. nov.) on Eucalyptus leaf litter, Oidiodendron eucalypti on Eucalyptus maidenii, Paracladophialophora cyperacearum (incl. Paracladophialophoraceae fam. nov.) and Periconia cyperacearum on leaves of Cyperaceae, Porodiplodia livistonae (incl. Porodiplodia gen. nov., Porodiplodiaceae fam. nov.) on Livistona australis, Sporidesmium melaleucae (incl. Sporidesmiales ord. nov.) on Melaleuca sp., Teratosphaeria sieberi on Eucalyptus sieberi, Thecaphora australiensis in capsules of a variant of Oxalis exilis. Brazil, Aspergillus serratalhadensis from soil, Diaporthe pseudoinconspicua from Poincianella pyramidalis, Fomitiporella pertenuis on dead wood, Geastrum magnosporum on soil, Marquesius aquaticus (incl. Marquesius gen. nov.) from submerged decaying twig and leaves of unidentified plant, Mastigosporella pigmentata from leaves of Qualea parviflorae, Mucor souzae from soil, Mycocalia aquaphila on decaying wood from tidal detritus, Preussia citrullina as endophyte from leaves of Citrullus lanatus, Queiroziella brasiliensis (incl. Queiroziella gen. nov.) as epiphytic yeast on leaves of Portea leptantha, Quixa

Published
2018

44. Unravelling species boundaries in the Aspergillus viridinutans complex (section Fumigati): opportunistic human and animal pathogens capable of interspecific hybridization

Author

Hubka, V., Barrs, V., Dudová, Z., Sklenář, F., Kubátová, A., Matsuzawa, T., Yaguchi, T., Horie, Y., Nováková, A., Frisvad, J.C., Talbot, J.J., Kolařík, M., Hubka, V., Barrs, V., Dudová, Z., Sklenář, F., Kubátová, A., Matsuzawa, T., Yaguchi, T., Horie, Y., Nováková, A., Frisvad, J.C., Talbot, J.J., and Kolařík, M.

Abstract

Although Aspergillus fumigatus is the major agent of invasive aspergillosis, an increasing number of infections are caused by its cryptic species, especially A. lentulus and the A. viridinutans species complex (AVSC). Their identification is clinically relevant because of antifungal drug resistance and refractory infections. Species boundaries in the AVSC are unresolved since most species have uniform morphology and produce interspecific hybrids in vitro. Clinical and environmental strains from six continents (n = 110) were characterized by DNA sequencing of four to six loci. Biological compatibilities were tested within and between major phylogenetic clades, and ascospore morphology was characterised. Species delimitation methods based on the multispecies coalescent model (MSC) supported recognition of ten species including one new species. Four species are confirmed opportunistic pathogens; A. udagawae followed by A. felis and A. pseudoviridinutans are known from opportunistic human infections, while A. felis followed by A. udagawae and A. wyomingensis are agents of feline sino-orbital aspergillosis. Recently described human-pathogenic species A. parafelis and A. pseudofelis are synonymized with A. felis and an epitype is designated for A. udagawae. Intraspecific mating assay showed that only a few of the heterothallic species can readily generate sexual morphs in vitro. Interspecific mating assays revealed that five different species combinations were biologically compatible. Hybrid ascospores had atypical surface ornamentation and significantly different dimensions compared to parental species. This suggests that species limits in the AVSC are maintained by both pre- and post-zygotic barriers and these species display a great potential for rapid adaptation and modulation of virulence. This study highlights that a sufficient number of strains representing genetic diversity within a species is essential for meaningful species boundaries delimitation in cryptic spe

Published
2018
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45. Fungal Planet description sheets: 716–784

Author

Crous, P.W. (Pedro Willem), Wingfield, M.J., Burgess, T.I., Hardy, (G.E.St.J. ), Gené, J., Guarro, J., Baseia, I.G., García, D., Gusmão, L.F.P., Souza-Motta, C.M., Rodríguez-Andrade, E., Saba, M., Schauflerová, A., Shivas, R.G., Simonini, G., Siqueira, J.P.Z., Sousa, J.O., Stajsic, V., Svetasheva, T., Tan, Y.P., Thangave, R., Tkalčec, Z., Ullah, S., Valente, P., Valenzuela-Lopez, N., Abrinbana, M., Viana Marques , D.A., Wong, P.T.W., Xavier de Lima, V., Groenewald, J.Z., Adamčík, S. (Slavomír), Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., Oliveira, R.J.V. de, Ercole, E., Hubka, V., Iturrieta-González, I., Kubátová, A., Martín, M.P., Moreau, P.-A. (Pierre-Arthur), Morte, A., Ordoñez, M.E., Rodríguez, A., Stchige, A.M., Vizzini, A., Abdollahzadeh, J., Abreu, V.P., Adamčíková, K., Albuquerque, G.M.R., Alexandrova, A.V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R.N., Bellanger, J.-M., Bezerra, J.L., Cabral , T.S., Caboň, M., Caicedo , E., Cantillo, T., Carnegie, A.J., Carmo, L.T., Castañeda-Ruiz, R.F., Clement, C.R., Čmoková, A., Conceição, L.B., Cruz, (R.H.S.F. ), Damm, U., Silva, (B.D.B. ) da, Silva, G.A. da, Silva, (R.M.F. ) da, Santiago, (A.L.C.M. de A. ), Oliveira, L.F. de, Souza , C.A.F. de, Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C.R., Fournier, J., Gibertoni, T.B., Hosaka, K., Iturriaga M. , T., Jadan, M., Jany, ( J.-L.), Jurjević, Z., Kolařík, M., Kušan, I., Landell, M.F., Leite Cordeiro, T.R., Lima, D.X., Loizides, M., Luo, S., Machado, A.R., Madrid, H., Magalhães, O.M.C., Marinho, P., Matočec, N., Mešić, A., Miller, A.N., Morozova, O.V., Neves , R.P., Nonaka, K., Nováková, A., Oberlies, N.H., Oliveira-Filho, J.R.C., Oliveira, T.G.L., Papp, V., Pereira, O.L., Perrone, G., Peterson, S.W., Pham, T.H.G., Raja, H.A., Raudabaugh, D.B., Řehulka, J., Crous, P.W. (Pedro Willem), Wingfield, M.J., Burgess, T.I., Hardy, (G.E.St.J. ), Gené, J., Guarro, J., Baseia, I.G., García, D., Gusmão, L.F.P., Souza-Motta, C.M., Rodríguez-Andrade, E., Saba, M., Schauflerová, A., Shivas, R.G., Simonini, G., Siqueira, J.P.Z., Sousa, J.O., Stajsic, V., Svetasheva, T., Tan, Y.P., Thangave, R., Tkalčec, Z., Ullah, S., Valente, P., Valenzuela-Lopez, N., Abrinbana, M., Viana Marques , D.A., Wong, P.T.W., Xavier de Lima, V., Groenewald, J.Z., Adamčík, S. (Slavomír), Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., Oliveira, R.J.V. de, Ercole, E., Hubka, V., Iturrieta-González, I., Kubátová, A., Martín, M.P., Moreau, P.-A. (Pierre-Arthur), Morte, A., Ordoñez, M.E., Rodríguez, A., Stchige, A.M., Vizzini, A., Abdollahzadeh, J., Abreu, V.P., Adamčíková, K., Albuquerque, G.M.R., Alexandrova, A.V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R.N., Bellanger, J.-M., Bezerra, J.L., Cabral , T.S., Caboň, M., Caicedo , E., Cantillo, T., Carnegie, A.J., Carmo, L.T., Castañeda-Ruiz, R.F., Clement, C.R., Čmoková, A., Conceição, L.B., Cruz, (R.H.S.F. ), Damm, U., Silva, (B.D.B. ) da, Silva, G.A. da, Silva, (R.M.F. ) da, Santiago, (A.L.C.M. de A. ), Oliveira, L.F. de, Souza , C.A.F. de, Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C.R., Fournier, J., Gibertoni, T.B., Hosaka, K., Iturriaga M. , T., Jadan, M., Jany, ( J.-L.), Jurjević, Z., Kolařík, M., Kušan, I., Landell, M.F., Leite Cordeiro, T.R., Lima, D.X., Loizides, M., Luo, S., Machado, A.R., Madrid, H., Magalhães, O.M.C., Marinho, P., Matočec, N., Mešić, A., Miller, A.N., Morozova, O.V., Neves , R.P., Nonaka, K., Nováková, A., Oberlies, N.H., Oliveira-Filho, J.R.C., Oliveira, T.G.L., Papp, V., Pereira, O.L., Perrone, G., Peterson, S.W., Pham, T.H.G., Raja, H.A., Raudabaugh, D.B., and Řehulka, J.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetopsina eucalypti on Eucalyptus leaf litter, Colletotrichum cobbittiense from Cordyline stricta × C. australis hybrid, Cyanodermella banksiae on Banksia ericifolia subsp. macrantha, Discosia macrozamiae on Macrozamia miquelii, Elsinoë banksiigena on Banksia marginata, Elsinoë elaeocarpi on Elaeocarpus sp., Elsinoë leucopogonis on Leucopogon sp., Helminthosporium livistonae on Livistona australis, Idriellomyces eucalypti (incl. Idriellomyces gen. nov.) on Eucalyptus obliqua, Lareunionomyces eucalypti on Eucalyptus sp., Myrotheciomyces corymbiae (incl. Myrotheciomyces gen. nov., Myrotheciomycetaceae fam. nov.), Neolauriomyces eucalypti (incl. Neolauriomyces gen. nov., Neolauriomycetaceae fam. nov.) on Eucalyptus sp., Nullicamyces eucalypti (incl. Nullicamyces gen. nov.) on Eucalyptus leaf litter, Oidiodendron eucalypti on Eucalyptus maidenii, Paracladophialophora cyperacearum (incl. Paracladophialophoraceae fam. nov.) and Periconia cyperacearum on leaves of Cyperaceae, Porodiplodia livistonae (incl. Porodiplodia gen. nov., Porodiplodiaceae fam. nov.) on Livistona australis, Sporidesmium melaleucae (incl. Sporidesmiales ord. nov.) on Melaleuca sp., Teratosphaeria sieberi on Eucalyptus sieberi, Thecaphora australiensis in capsules of a variant of Oxalis exilis. Brazil, Aspergillus serratalhadensis from soil, Diaporthe pseudoinconspicua from Poincianella pyramidalis, Fomitiporella pertenuis on dead wood, Geastrum magnosporum on soil, Marquesius aquaticus (incl. Marquesius gen. nov.) from submerged decaying twig and leaves of unidentified plant, Mastigosporella pigmentata from leaves of Qualea parviflorae, Mucor souzae from soil, Mycocalia aquaphila on decaying wood from tidal detritus, Preussia citrullina as endophyte from leaves of Citrullus lanatus, Queiroziella brasiliensis (incl. Queiroziella gen. nov.) as epiphytic yeast on leaves of Portea leptantha, Quixa

Published
2018
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46. DNA sequence data as types of fungal taxa

Author

Barreto, R.W., Gerlach, A.D.C.L., Grube, M., Harder, C.B., Jeppesen, T.S., Kirchmair, M., Kiyashko, A., Knapp, D.G., Knudsen, H., Knudsen, K., Knutsson, T., Kolařík, M., Kõljalg, U., Košuthová, A., Koszka, A., Kotiranta, H., Kotkova, V., Koukol, O., Kout, J., Kovács, G.M., Kříž, M., Kruys, Å., Kučera, V., Kudzma, L., Myllys, L., Nagy, I., Nagy, L.G., Neves, M.A., Niemelä, T., Nimis, P.L., Niveiro, N., Noordeloos, M.E., Nordin, A., Noumeur, S.R., Novozhilov, Y., Nuytinck, J., Ohenoja, E., Oliveira Fiuza, P., Orange, A., Ordynets, A., Ortiz-Santana, B., Pacheco, L., Pál-Fám, F., Palacio, M., Palice, Z., Papp, V., Pärtel, K., Pawlowska, J., Paz, A., Peintner, U., Pennycook, S., Liparini Pereira, O., Pérez Daniëls, P., Pérez-De-Gregorio Capella, M.À., Pérez del Amo, C.M., Pérez Gorjón, S., Pérez-Ortega, S., Pérez-Vargas, I., Rubio Casas, L., Rusevska, K., Saar, G., Saar, I., Salcedo, I., Salcedo Martínez, S.M., Salvador Montoya, C.A., Sánchez-Ramírez, S., Sandoval-Sierra, J.V., Tedebrand, J.-O., Tena Lahoz, R., Temina, M., Thell, A., Thines, M., Thor, G., Thüs, H., Tibell, L., Tibell, S., Timdal, E., Tkalčec, Z., Tønsberg, T., Trichies, G., Triebel, D., Tsurykau, A., Tulloss, R.E., Tuovinen, V., Ulloa Sosa, M., Urcelay, C., Valade, F., Valenzuela Garza, R., van den Boom, P., Van Vooren, N., Vasco-Palacios, A.M., Vauras, J., Velasco Santos, J.M., Vellinga, E., Verbeken, A., Vetlesen, P., Vizzini, A., Voglmayr, H., Volobuev, S., von Brackel, W., Barreto, R.W., Gerlach, A.D.C.L., Grube, M., Harder, C.B., Jeppesen, T.S., Kirchmair, M., Kiyashko, A., Knapp, D.G., Knudsen, H., Knudsen, K., Knutsson, T., Kolařík, M., Kõljalg, U., Košuthová, A., Koszka, A., Kotiranta, H., Kotkova, V., Koukol, O., Kout, J., Kovács, G.M., Kříž, M., Kruys, Å., Kučera, V., Kudzma, L., Myllys, L., Nagy, I., Nagy, L.G., Neves, M.A., Niemelä, T., Nimis, P.L., Niveiro, N., Noordeloos, M.E., Nordin, A., Noumeur, S.R., Novozhilov, Y., Nuytinck, J., Ohenoja, E., Oliveira Fiuza, P., Orange, A., Ordynets, A., Ortiz-Santana, B., Pacheco, L., Pál-Fám, F., Palacio, M., Palice, Z., Papp, V., Pärtel, K., Pawlowska, J., Paz, A., Peintner, U., Pennycook, S., Liparini Pereira, O., Pérez Daniëls, P., Pérez-De-Gregorio Capella, M.À., Pérez del Amo, C.M., Pérez Gorjón, S., Pérez-Ortega, S., Pérez-Vargas, I., Rubio Casas, L., Rusevska, K., Saar, G., Saar, I., Salcedo, I., Salcedo Martínez, S.M., Salvador Montoya, C.A., Sánchez-Ramírez, S., Sandoval-Sierra, J.V., Tedebrand, J.-O., Tena Lahoz, R., Temina, M., Thell, A., Thines, M., Thor, G., Thüs, H., Tibell, L., Tibell, S., Timdal, E., Tkalčec, Z., Tønsberg, T., Trichies, G., Triebel, D., Tsurykau, A., Tulloss, R.E., Tuovinen, V., Ulloa Sosa, M., Urcelay, C., Valade, F., Valenzuela Garza, R., van den Boom, P., Van Vooren, N., Vasco-Palacios, A.M., Vauras, J., Velasco Santos, J.M., Vellinga, E., Verbeken, A., Vetlesen, P., Vizzini, A., Voglmayr, H., Volobuev, S., and von Brackel, W.

Abstract

Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11th International Mycological Congress (Puerto Rico, July 2018). We consider various genetic processes affecting the distribution of alleles among taxa and find that alleles may not consistently and uniquely represent the species within which they are contained. Should the proposals be accepted, the meaning of nomenclatural types would change in a fundamental way from physical objects as sources of data to the data themselves. Such changes are conducive to irreproducible science, the potential typification on artefactual data, and massive creation of names with low information content, ultimately causing nomenclatural instability and unnecessary work for future researchers that would stall future explorations of fungal diversity. We conclude that the acceptance of DNA sequences alone as types of names of taxa, under the terms used in the current proposals, is unnecessary and would not solve the problem of naming putative taxa known only from DNA sequences in a scientifically defensible way. As an alternative, we highlight the use of formulas for naming putative taxa (candidate taxa) that do not require any modification of the ICN.

Published
2018

47. Fungal Planet description sheets: 716–784

Author

Russian Academy of Sciences, Russian Science Foundation, Universidade de Pernambuco, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco, Fundação de Amparo à Pesquisa do Estado de São Paulo Minas Gerais, Instituto Chico Mendes de Conservação da Biodiversidade (Brasil), Fundação Cultural Palmares, Secretaría de Educación Superior, Ciencia, Tecnología e Innovación (Ecuador), Pontificia Universidad Católica del Ecuador, Comisión Nacional de Investigación Científica y Tecnológica (Chile), Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), Charles University (Czech Republic), Ministry of Health of the Czech Republic, Slovak-American Foundation, VEGA Agency (Slovakia), Higher Education Commission (Pakistan), Ministry of Education, Youth and Sports (Czech Republic), European Commission, Fundación Séneca, Ministerio de Economía y Competitividad (España), Pennsylvania Department of Conservation and Natural Resources, Mycological Society of America, University of Illinois, Ministry of Agriculture (Government of Saskatchewan, Canada), Western Grains Research Foundation, Herb, Spice and Specialty Agriculture Association (Canada), Saskatchewan Crop Insurance Corporation, Martín, María P. [0000-0002-1235-4418], Crous, P. W., Wingfield, M. J., Burgess, T.I., Hardy, G. E. St. J., Gené, J., Guarro, J., Baseia, I.G., García, D., Gusmão, L. F. P., Souza-Motta, C. M., Thangavel, R., Xavier de Lima, V., Groenewald, J. Z., Barili, A., Barnes, C. W., Bezerra, J. D. P., Bordallo, J. J., Cano-Lira, J.F., Oliveira, R. J. V., Ercole, E., Hubka, V., Vizzini, Alfredo, Iturrieta-González, I., Kubátová, A., Martín, María P., Moreau, Pierre-Arthur, Morte, A., Ordoñez, M. E., Rodríguez, A., Stchigel, A. M., Abdollahzadeh, J., Abreu, V. P., Adamčíková, K., Albuquerque, G. M. R., Alexandrova, A. V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R. N., Castañeda-Ruiz, R.F., Bellanger, J.-M., Bezerra, J., Cabral, T. S., Caboň, M., Caicedo, E., Cantillo, T., Carnegie, A. J., Carmo, L. T., Clement, C. R., Čmoková, A., Conceição, L. B., Cruz, R. H. S. F., Damm, U., Silva, Bianca D. B., Silva, G. A., Silva, R. M. F., Santiago, A. L. C. M. de A., Gibertoni, T. B., Oliveira, L. F., Souza, C. A. F., Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C. R., Fournier, J., Hosaka, K., Iturriaga, T., Jadan, M., Jany, J.-L., Jurjević, Željko, Kolařík, M., Kušan, I., Landell, M. F., Leite Cordeiro, T. R., Mešić, A., Lima, D. X., Loizides, M., Luo, S., Machado, A. R., Madrid, H., Magalhães, O. M. C., Marinho, P., Matočec, N., Miller, A. N., Morozova, O. V., Neves, R. P., Nonaka, K., Nováková, A., Oberlies, N. H., Oliveira-Filho, J. R. C., Oliveira, T. G. L., Papp, V., Saba, M., Pereira, O. L., Perrone, G., Peterson, S.W., Pham, T. H. G., Raja, H.A., Raudabaugh, D. B., Řehulka, J., Rodríguez-Andrade, E., Schauflerova, A., Shivas, R. G., Simonini, G., Siqueira, J. P. Z., Sousa, Julieth O., Stajsic, V., Svetasheva, T., Tan, Y. P., Tkalčec, Z., Adamčík, S., Ullah, S., Valente, P., Valenzuela-Lopez, N., Abrinbana, M., Viana Marques, D. A., Wong, P. T. W., Russian Academy of Sciences, Russian Science Foundation, Universidade de Pernambuco, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco, Fundação de Amparo à Pesquisa do Estado de São Paulo Minas Gerais, Instituto Chico Mendes de Conservação da Biodiversidade (Brasil), Fundação Cultural Palmares, Secretaría de Educación Superior, Ciencia, Tecnología e Innovación (Ecuador), Pontificia Universidad Católica del Ecuador, Comisión Nacional de Investigación Científica y Tecnológica (Chile), Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), Charles University (Czech Republic), Ministry of Health of the Czech Republic, Slovak-American Foundation, VEGA Agency (Slovakia), Higher Education Commission (Pakistan), Ministry of Education, Youth and Sports (Czech Republic), European Commission, Fundación Séneca, Ministerio de Economía y Competitividad (España), Pennsylvania Department of Conservation and Natural Resources, Mycological Society of America, University of Illinois, Ministry of Agriculture (Government of Saskatchewan, Canada), Western Grains Research Foundation, Herb, Spice and Specialty Agriculture Association (Canada), Saskatchewan Crop Insurance Corporation, Martín, María P. [0000-0002-1235-4418], Crous, P. W., Wingfield, M. J., Burgess, T.I., Hardy, G. E. St. J., Gené, J., Guarro, J., Baseia, I.G., García, D., Gusmão, L. F. P., Souza-Motta, C. M., Thangavel, R., Xavier de Lima, V., Groenewald, J. Z., Barili, A., Barnes, C. W., Bezerra, J. D. P., Bordallo, J. J., Cano-Lira, J.F., Oliveira, R. J. V., Ercole, E., Hubka, V., Vizzini, Alfredo, Iturrieta-González, I., Kubátová, A., Martín, María P., Moreau, Pierre-Arthur, Morte, A., Ordoñez, M. E., Rodríguez, A., Stchigel, A. M., Abdollahzadeh, J., Abreu, V. P., Adamčíková, K., Albuquerque, G. M. R., Alexandrova, A. V., Álvarez Duarte, E., Armstrong-Cho, C., Banniza, S., Barbosa, R. N., Castañeda-Ruiz, R.F., Bellanger, J.-M., Bezerra, J., Cabral, T. S., Caboň, M., Caicedo, E., Cantillo, T., Carnegie, A. J., Carmo, L. T., Clement, C. R., Čmoková, A., Conceição, L. B., Cruz, R. H. S. F., Damm, U., Silva, Bianca D. B., Silva, G. A., Silva, R. M. F., Santiago, A. L. C. M. de A., Gibertoni, T. B., Oliveira, L. F., Souza, C. A. F., Déniel, F., Dima, B., Dong, G., Edwards, J., Félix, C. R., Fournier, J., Hosaka, K., Iturriaga, T., Jadan, M., Jany, J.-L., Jurjević, Željko, Kolařík, M., Kušan, I., Landell, M. F., Leite Cordeiro, T. R., Mešić, A., Lima, D. X., Loizides, M., Luo, S., Machado, A. R., Madrid, H., Magalhães, O. M. C., Marinho, P., Matočec, N., Miller, A. N., Morozova, O. V., Neves, R. P., Nonaka, K., Nováková, A., Oberlies, N. H., Oliveira-Filho, J. R. C., Oliveira, T. G. L., Papp, V., Saba, M., Pereira, O. L., Perrone, G., Peterson, S.W., Pham, T. H. G., Raja, H.A., Raudabaugh, D. B., Řehulka, J., Rodríguez-Andrade, E., Schauflerova, A., Shivas, R. G., Simonini, G., Siqueira, J. P. Z., Sousa, Julieth O., Stajsic, V., Svetasheva, T., Tan, Y. P., Tkalčec, Z., Adamčík, S., Ullah, S., Valente, P., Valenzuela-Lopez, N., Abrinbana, M., Viana Marques, D. A., and Wong, P. T. W.

Abstract

Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetopsina eucalypti on Eucalyptus leaf litter, Colletotrichum cobbittiense from Cordyline stricta × C. australis hybrid, Cyanodermella banksiae on Banksia ericifolia subsp. macrantha, Discosia macrozamiae on Macrozamia miquelii, Elsinoë banksiigena on Banksia marginata, Elsinoë elaeocarpi on Elaeocarpus sp., Elsinoë leucopogonis on Leucopogon sp., Helminthosporium livistonae on Livistona australis, Idriellomyces eucalypti (incl. Idriellomyces gen. nov.) on Eucalyptus obliqua, Lareunionomyces eucalypti on Eucalyptus sp., Myrotheciomyces corymbiae (incl. Myrotheciomyces gen. nov., Myrotheciomycetaceae fam. nov.), Neolauriomyces eucalypti (incl. Neolauriomyces gen. nov., Neolauriomycetaceae fam. nov.) on Eucalyptus sp., Nullicamyces eucalypti (incl. Nullicamyces gen. nov.) on Eucalyptus leaf litter, Oidiodendron eucalypti on Eucalyptus maidenii, Paracladophialophora cyperacearum (incl. Paracladophialophoraceae fam. nov.) and Periconia cyperacearum on leaves of Cyperaceae, Porodiplodia livistonae (incl. Porodiplodia gen. nov., Porodiplodiaceae fam. nov.) on Livistona australis, Sporidesmium melaleucae (incl. Sporidesmiales ord. nov.) on Melaleuca sp., Teratosphaeria sieberi on Eucalyptus sieberi, Thecaphora australiensis in capsules of a variant of Oxalis exilis. Brazil, Aspergillus serratalhadensis from soil, Diaporthe pseudoinconspicua from Poincianella pyramidalis, Fomitiporella pertenuis on dead wood, Geastrum magnosporum on soil, Marquesius aquaticus (incl. Marquesius gen. nov.) from submerged decaying twig and leaves of unidentified plant, Mastigosporella pigmentata from leaves of Qualea parviflorae, Mucor souzae from soil, Mycocalia aquaphila on decaying wood from tidal detritus, Preussia citrullina as endophyte from leaves of Citrullus lanatus, Queiroziella brasiliensis (incl. Queiroziella gen. nov.) as epiphytic yeast on leaves of Portea leptantha, Quixa, Canada, Didymella cari on Carum carvi and Coriandrum sativum. Chile, Araucasphaeria foliorum (incl. Araucasphaeria gen. nov.) on Araucaria araucana, Aspergillus tumidus from soil, Lomentospora valparaisensis from soil. Colombia, Corynespora pseudocassiicola on Byrsonima sp., Eucalyptostroma eucalyptorum on Eucalyptus pellita, Neometulocladosporiella eucalypti (incl. Neometulocladosporiella gen. nov.) on Eucalyptus grandis × urophylla, Tracylla eucalypti (incl. Tracyllaceae fam. nov., Tracyllalales ord. nov.) on Eucalyptus urophylla. Cyprus, Gyromitra anthracobia (incl. Gyromitra subg. Pseudoverpa) on burned soil. Czech Republic, Lecanicillium restrictum from the surface of the wooden barrel, Lecanicillium testudineum from scales of Trachemys scripta elegans. Ecuador, Entoloma yanacolor and Saproamanita quitensis on soil. France, Lentithecium carbonneanum from submerged decorticated Populus branch. Hungary, Pleuromyces hungaricus (incl. Pleuromyces gen. nov.) from a large Fagus sylvatica log. Iran, Zymoseptoria crescenta on Aegilops triuncialis. Malaysia, Ochroconis musicola on Musa sp. Mexico, Cladosporium michoacanense from soil. New Zealand , Acrodontium metrosideri on Metrosideros excelsa, Polynema podocarpi on Podocarpus totara, Pseudoarthrographis phlogis (incl. Pseudoarthrographis gen. nov.) on Phlox subulata. Nigeria, Coprinopsis afrocinerea on soil. Pakistan, Russula mansehraensis on soil under Pinus roxburghii. Russia, Baorangia alexandri on soil in deciduous forests with Quercus mongolica. South Africa, Didymocyrtis brachylaenae on Brachylaena discolor. Spain, Alfaria dactylis from fruit of Phoenix dactylifera, Dothiora infuscans from a blackened wall, Exophiala nidicola from the nest of an unidentified bird, Matsushimaea monilioides from soil, Terfezia morenoi on soil. United Arab Emirates, Tirmania honrubiae on soil. USA, Arxotrichum wyomingense (incl. Arxotrichum gen. nov.) from soil, Hongkongmyces snookiorum from submerged detritus from a fresh water f

Published
2018

48. Polyphasic data support the splitting of Aspergillus candidus into two species; proposal of Aspergillus dobrogensis sp. nov.

Author

Universitat Rovira i Virgili, Hubka V, Nováková A, Jurjević Z, Sklenář F, Frisvad JC, Houbraken J, Arendrup MC, Jørgensen KM, Siqueira JPZ, Gené J, Kolařík M, Universitat Rovira i Virgili, and Hubka V, Nováková A, Jurjević Z, Sklenář F, Frisvad JC, Houbraken J, Arendrup MC, Jørgensen KM, Siqueira JPZ, Gené J, Kolařík M

Abstract

Aspergillus candidus is a species frequently isolated from stored grain, food, indoor environments, soil and occasionally also from clinical material. Recent bioprospecting studies highlighted the potential of using A. candidus and its relatives in various industrial sectors as a result of their significant production of enzymes and bioactive compounds. A high genetic variability was observed among A. candidus isolates originating from various European countries and the USA, that were mostly isolated from indoor environments, caves and clinical material. The A. candidus sensu lato isolates were characterized by DNA sequencing of four genetic loci, and agreement between molecular species delimitation results, morphological characters and exometabolite spectra were studied. Classical phylogenetic methods (maximum likelihood, Bayesian inference) and species delimitation methods based on the multispecies coalescent model supported recognition of up to three species in A. candidus sensu lato. After evaluation of phenotypic data, a broader species concept was adopted, and only one new species, Aspergillus dobrogensis, was proposed. This species is represented by 22 strains originating from seven countries (ex-type strain CCF 4651T=NRRL 62821T=IBT 32697T=CBS 143370T) and its differentiation from A. candidus is relevant for bioprospecting studies because these species have different exometabolite profiles. Evaluation of the antifungal susceptibility of section Candidi members to six antifungals using the reference EUCAST method showed that all species have low minimum inhibitory concentrations for all tested antifungals. These results suggest applicability of a wide spectrum of antifungal agents for treatment of infections caused by species from section Candidi.

Published
2018

49. Principles of Synthesizing Medical Datasets

Author

Kolárik Michal, Gojdičová Lucia, and Paralič Ján

Subjects
data synthetization, gan, ctgan, Electrical engineering. Electronics. Nuclear engineering, TK1-9971
Abstract

Data in many application domains provide a valuable source for analysis and data-driven decision support. On the other hand, legislative restrictions are provided, especially on personal data and patients’ data in the medical domain. In order to maximize the use of data for decision purposes and comply with legislation, sensitive data needs to be properly anonymized or synthetized. This article contributes to the area of medical records synthesis. We first introduce this topic and present it in a broader context, as well as in terms of methods used and metrics for their evaluation. Based on the related work analysis, we selected CTGAN neural network model for data synthesis and experimentally validated it on three different medical datasets. The results were evaluated both quantitatively by means of selected metrics as well as qualitatively by means of proper visualization techniques. The results showed that in most cases, the synthesized dataset is a very good approximation of the original one, with similar prediction performance.

Published
2022
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