317 results on '"Kromann P"'
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2. “I felt like a little kind of jolt of energy in my chest”: embodiment in learning in continuing professional development for general practitioners
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Vestergaard, Stense Kromann and Risor, Torsten
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- 2024
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3. BLOOM: A 176B-Parameter Open-Access Multilingual Language Model
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Workshop, BigScience, Scao, Teven Le, Fan, Angela, Akiki, Christopher, Pavlick, Ellie, Ilić, Suzana, Hesslow, Daniel, Castagné, Roman, Luccioni, Alexandra Sasha, Yvon, François, Gallé, Matthias, Tow, Jonathan, Rush, Alexander M., Biderman, Stella, Webson, Albert, Ammanamanchi, Pawan Sasanka, Wang, Thomas, Sagot, Benoît, Muennighoff, Niklas, del Moral, Albert Villanova, Ruwase, Olatunji, Bawden, Rachel, Bekman, Stas, McMillan-Major, Angelina, Beltagy, Iz, Nguyen, Huu, Saulnier, Lucile, Tan, Samson, Suarez, Pedro Ortiz, Sanh, Victor, Laurençon, Hugo, Jernite, Yacine, Launay, Julien, Mitchell, Margaret, Raffel, Colin, Gokaslan, Aaron, Simhi, Adi, Soroa, Aitor, Aji, Alham Fikri, Alfassy, Amit, Rogers, Anna, Nitzav, Ariel Kreisberg, Xu, Canwen, Mou, Chenghao, Emezue, Chris, Klamm, Christopher, Leong, Colin, van Strien, Daniel, Adelani, David Ifeoluwa, Radev, Dragomir, Ponferrada, Eduardo González, Levkovizh, Efrat, Kim, Ethan, Natan, Eyal Bar, De Toni, Francesco, Dupont, Gérard, Kruszewski, Germán, Pistilli, Giada, Elsahar, Hady, Benyamina, Hamza, Tran, Hieu, Yu, Ian, Abdulmumin, Idris, Johnson, Isaac, Gonzalez-Dios, Itziar, de la Rosa, Javier, Chim, Jenny, Dodge, Jesse, Zhu, Jian, Chang, Jonathan, Frohberg, Jörg, Tobing, Joseph, Bhattacharjee, Joydeep, Almubarak, Khalid, Chen, Kimbo, Lo, Kyle, Von Werra, Leandro, Weber, Leon, Phan, Long, allal, Loubna Ben, Tanguy, Ludovic, Dey, Manan, Muñoz, Manuel Romero, Masoud, Maraim, Grandury, María, Šaško, Mario, Huang, Max, Coavoux, Maximin, Singh, Mayank, Jiang, Mike Tian-Jian, Vu, Minh Chien, Jauhar, Mohammad A., Ghaleb, Mustafa, Subramani, Nishant, Kassner, Nora, Khamis, Nurulaqilla, Nguyen, Olivier, Espejel, Omar, de Gibert, Ona, Villegas, Paulo, Henderson, Peter, Colombo, Pierre, Amuok, Priscilla, Lhoest, Quentin, Harliman, Rheza, Bommasani, Rishi, López, Roberto Luis, Ribeiro, Rui, Osei, Salomey, Pyysalo, Sampo, Nagel, Sebastian, Bose, Shamik, Muhammad, Shamsuddeen Hassan, Sharma, Shanya, Longpre, Shayne, Nikpoor, Somaieh, Silberberg, Stanislav, Pai, Suhas, Zink, Sydney, Torrent, Tiago Timponi, Schick, Timo, Thrush, Tristan, Danchev, Valentin, Nikoulina, Vassilina, Laippala, Veronika, Lepercq, Violette, Prabhu, Vrinda, Alyafeai, Zaid, Talat, Zeerak, Raja, Arun, Heinzerling, Benjamin, Si, Chenglei, Taşar, Davut Emre, Salesky, Elizabeth, Mielke, Sabrina J., Lee, Wilson Y., Sharma, Abheesht, Santilli, Andrea, Chaffin, Antoine, Stiegler, Arnaud, Datta, Debajyoti, Szczechla, Eliza, Chhablani, Gunjan, Wang, Han, Pandey, Harshit, Strobelt, Hendrik, Fries, Jason Alan, Rozen, Jos, Gao, Leo, Sutawika, Lintang, Bari, M Saiful, Al-shaibani, Maged S., Manica, Matteo, Nayak, Nihal, Teehan, Ryan, Albanie, Samuel, Shen, Sheng, Ben-David, Srulik, Bach, Stephen H., Kim, Taewoon, Bers, Tali, Fevry, Thibault, Neeraj, Trishala, Thakker, Urmish, Raunak, Vikas, Tang, Xiangru, Yong, Zheng-Xin, Sun, Zhiqing, Brody, Shaked, Uri, Yallow, Tojarieh, Hadar, Roberts, Adam, Chung, Hyung Won, Tae, Jaesung, Phang, Jason, Press, Ofir, Li, Conglong, Narayanan, Deepak, Bourfoune, Hatim, Casper, Jared, Rasley, Jeff, Ryabinin, Max, Mishra, Mayank, Zhang, Minjia, Shoeybi, Mohammad, Peyrounette, Myriam, Patry, Nicolas, Tazi, Nouamane, Sanseviero, Omar, von Platen, Patrick, Cornette, Pierre, Lavallée, Pierre François, Lacroix, Rémi, Rajbhandari, Samyam, Gandhi, Sanchit, Smith, Shaden, Requena, Stéphane, Patil, Suraj, Dettmers, Tim, Baruwa, Ahmed, Singh, Amanpreet, Cheveleva, Anastasia, Ligozat, Anne-Laure, Subramonian, Arjun, Névéol, Aurélie, Lovering, Charles, Garrette, Dan, Tunuguntla, Deepak, Reiter, Ehud, Taktasheva, Ekaterina, Voloshina, Ekaterina, Bogdanov, Eli, Winata, Genta Indra, Schoelkopf, Hailey, Kalo, Jan-Christoph, Novikova, Jekaterina, Forde, Jessica Zosa, Clive, Jordan, Kasai, Jungo, Kawamura, Ken, Hazan, Liam, Carpuat, Marine, Clinciu, Miruna, Kim, Najoung, Cheng, Newton, Serikov, Oleg, Antverg, Omer, van der Wal, Oskar, Zhang, Rui, Zhang, Ruochen, Gehrmann, Sebastian, Mirkin, Shachar, Pais, Shani, Shavrina, Tatiana, Scialom, Thomas, Yun, Tian, Limisiewicz, Tomasz, Rieser, Verena, Protasov, Vitaly, Mikhailov, Vladislav, Pruksachatkun, Yada, Belinkov, Yonatan, Bamberger, Zachary, Kasner, Zdeněk, Rueda, Alice, Pestana, Amanda, Feizpour, Amir, Khan, Ammar, Faranak, Amy, Santos, Ana, Hevia, Anthony, Unldreaj, Antigona, Aghagol, Arash, Abdollahi, Arezoo, Tammour, Aycha, HajiHosseini, Azadeh, Behroozi, Bahareh, Ajibade, Benjamin, Saxena, Bharat, Ferrandis, Carlos Muñoz, McDuff, Daniel, Contractor, Danish, Lansky, David, David, Davis, Kiela, Douwe, Nguyen, Duong A., Tan, Edward, Baylor, Emi, Ozoani, Ezinwanne, Mirza, Fatima, Ononiwu, Frankline, Rezanejad, Habib, Jones, Hessie, Bhattacharya, Indrani, Solaiman, Irene, Sedenko, Irina, Nejadgholi, Isar, Passmore, Jesse, Seltzer, Josh, Sanz, Julio Bonis, Dutra, Livia, Samagaio, Mairon, Elbadri, Maraim, Mieskes, Margot, Gerchick, Marissa, Akinlolu, Martha, McKenna, Michael, Qiu, Mike, Ghauri, Muhammed, Burynok, Mykola, Abrar, Nafis, Rajani, Nazneen, Elkott, Nour, Fahmy, Nour, Samuel, Olanrewaju, An, Ran, Kromann, Rasmus, Hao, Ryan, Alizadeh, Samira, Shubber, Sarmad, Wang, Silas, Roy, Sourav, Viguier, Sylvain, Le, Thanh, Oyebade, Tobi, Le, Trieu, Yang, Yoyo, Nguyen, Zach, Kashyap, Abhinav Ramesh, Palasciano, Alfredo, Callahan, Alison, Shukla, Anima, Miranda-Escalada, Antonio, Singh, Ayush, Beilharz, Benjamin, Wang, Bo, Brito, Caio, Zhou, Chenxi, Jain, Chirag, Xu, Chuxin, Fourrier, Clémentine, Periñán, Daniel León, Molano, Daniel, Yu, Dian, Manjavacas, Enrique, Barth, Fabio, Fuhrimann, Florian, Altay, Gabriel, Bayrak, Giyaseddin, Burns, Gully, Vrabec, Helena U., Bello, Imane, Dash, Ishani, Kang, Jihyun, Giorgi, John, Golde, Jonas, Posada, Jose David, Sivaraman, Karthik Rangasai, Bulchandani, Lokesh, Liu, Lu, Shinzato, Luisa, de Bykhovetz, Madeleine Hahn, Takeuchi, Maiko, Pàmies, Marc, Castillo, Maria A, Nezhurina, Marianna, Sänger, Mario, Samwald, Matthias, Cullan, Michael, Weinberg, Michael, De Wolf, Michiel, Mihaljcic, Mina, Liu, Minna, Freidank, Moritz, Kang, Myungsun, Seelam, Natasha, Dahlberg, Nathan, Broad, Nicholas Michio, Muellner, Nikolaus, Fung, Pascale, Haller, Patrick, Chandrasekhar, Ramya, Eisenberg, Renata, Martin, Robert, Canalli, Rodrigo, Su, Rosaline, Su, Ruisi, Cahyawijaya, Samuel, Garda, Samuele, Deshmukh, Shlok S, Mishra, Shubhanshu, Kiblawi, Sid, Ott, Simon, Sang-aroonsiri, Sinee, Kumar, Srishti, Schweter, Stefan, Bharati, Sushil, Laud, Tanmay, Gigant, Théo, Kainuma, Tomoya, Kusa, Wojciech, Labrak, Yanis, Bajaj, Yash Shailesh, Venkatraman, Yash, Xu, Yifan, Xu, Yingxin, Xu, Yu, Tan, Zhe, Xie, Zhongli, Ye, Zifan, Bras, Mathilde, Belkada, Younes, and Wolf, Thomas
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Computer Science - Computation and Language - Abstract
Large language models (LLMs) have been shown to be able to perform new tasks based on a few demonstrations or natural language instructions. While these capabilities have led to widespread adoption, most LLMs are developed by resource-rich organizations and are frequently kept from the public. As a step towards democratizing this powerful technology, we present BLOOM, a 176B-parameter open-access language model designed and built thanks to a collaboration of hundreds of researchers. BLOOM is a decoder-only Transformer language model that was trained on the ROOTS corpus, a dataset comprising hundreds of sources in 46 natural and 13 programming languages (59 in total). We find that BLOOM achieves competitive performance on a wide variety of benchmarks, with stronger results after undergoing multitask prompted finetuning. To facilitate future research and applications using LLMs, we publicly release our models and code under the Responsible AI License.
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- 2022
4. Pulmonary diffusing capacity for carbon monoxide and nitric oxide after COVID‐19: A prospective cohort study (the SECURe study)
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Anna Agnes Lytzen, Thora Wesenberg Helt, Jan Christensen, Thomas Kromann Lund, Anna Kalhauge, Frederikke Falkencrone Rönsholt, Daria Podlekavera, Elisabeth Arndal, Anne‐Mette Lebech, Birgitte Hanel, Terese L. Katzenstein, Ronan M. G. Berg, and Jann Mortensen
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diffusion ,long COVID ,SARS‐CoV‐2 ,Physiology ,QP1-981 - Abstract
Abstract Many patients exhibit persistently reduced pulmonary diffusing capacity after coronavirus disease 2019 (COVID‐19). In this study, dual test gas diffusing capacity for carbon monoxide and nitric oxide (DL,CO,NO) metrics and their relationship to disease severity and physical performance were examined in patients who previously had COVID‐19. An initial cohort of 148 patients diagnosed with COVID‐19 of all severities between March 2020 and March 2021 had a DL,CO,NO measurement performed using the single‐breath method at 5.7 months follow‐up. All patients with at least one abnormal DL,CO,NO metric (n = 87) were revaluated at 12.5 months follow‐up. The DL,CO,NO was used to provide the pulmonary diffusing capacity for nitric oxide (DL,NO), the pulmonary diffusing capacity for carbon monoxide (DL,CO,5s), the alveolar–capillary membrane diffusing capacity and the pulmonary capillary blood volume. At both 5.7 and 12.5 months, physical performance was assessed using a 30 s sit‐to‐stand test and the 6 min walk test. Approximately 60% of patients exhibited a severity‐dependent decline in at least one DL,CO,NO metric at 5.7 months follow‐up. At 12.5 months, both DL,NO and DL,CO,5s had returned towards normal but still remained abnormal in two‐thirds of the patients. Concurrently, improvements in physical performance were observed, but with no apparent relationship to any DL,CO,NO metric. The severity‐dependent decline in DL,NO and DL,CO observed at 5.7 months after COVID‐19 appears to be reduced consistently at 12.5 months follow‐up in the majority of patients, despite marked improvements in physical performance.
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- 2024
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5. Maximal respiratory pressure after COVID‐19 compared with reference material in healthy adults: A prospective cohort study (The SECURe study)
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Thora Wesenberg Helt, Jan Christensen, Ronan M. G. Berg, Thomas Kromann Lund, Anna Kalhauge, Frederikke Rönsholt, Daria Podlekareva, Elisabeth Arndal, Flemming Madsen, Mathias Munkholm, Birgitte Hanel, Anne‐Mette Lebech, Terese Lea Katzenstein, and Jann Mortensen
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COVID‐19 ,DALFUMAT ,respiratory muscle strength, reference values, SECURe ,Physiology ,QP1-981 - Abstract
Abstract After COVID‐19 long term respiratory symptoms and reduced lung function including maximal inspiratory pressure (MIP) and maximal expiratory pressure (MEP) have been reported. However, no studies have looked at MIP and MEP in all disease groups and the reference materials collection methods differ substantially. We aimed to determine MIP and MEP in individuals after COVID‐19 infection with different disease severity using reference material of healthy control group obtained using the same standardized method. Patients with COVID‐19 were included March 2020–March 2021 at Rigshospitalet, Denmark. MIP and MEP were measured using microRPM. Predicted MIP and MEP were calculated using reference material obtained from 298 healthy adults aged 18–97 years using the same method. In SECURe, 145 participants were measured median 5 months after COVID‐19 diagnosis and of these 16% had reduced MIP and/or MEP. There was reduced spirometry and total lung capacity, but not reduced diffusion capacity in those with abnormal MIP and/or MEP compared with normal MIP and MEP. Of those with reduced MIP and/or MEP at 5 months, 80% still had reduced MIP and/or MEP at 12 months follow‐up. In conclusion, few have reduced MIP and/or MEP 5 months after COVID‐19 and little improvement was seen over time.
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- 2024
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6. Cratering of Soil by Impinging Jets of Gas, with Application to Landing Rockets on Planetary Surfaces
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Metzger, Philip T., Vu, Bruce T., Taylor, D. E., Kromann, M. J., Fuchs, M., Yutko, B., Dokos, Adam, Immer, Christopher D., Lane, John E., Dunkel, M. B., Donahue, Carly M., and Latta III, Robert C.
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Astrophysics - Earth and Planetary Astrophysics ,Condensed Matter - Statistical Mechanics ,Physics - Fluid Dynamics - Abstract
Several physical mechanisms are involved in excavating granular materials beneath a vertical jet of gas. These occur, for example, beneath the exhaust plume of a rocket landing on the soil of the Moon or Mars. A series of experiments and simulations have been performed to provide a detailed view of the complex gas/soil interactions. Measurements have also been taken from the Apollo lunar landing videos and from photographs of the resulting terrain, and these help to demonstrate how the interactions extrapolate into the lunar environment. It is important to understand these processes at a fundamental level to support the on-going design of higher-fidelity numerical simulations and larger-scale experiments. These are needed to enable future lunar exploration wherein multiple hardware assets will be placed on the Moon within short distances of one another. The high-velocity spray of soil from landing spacecraft must be accurately predicted and controlled lest it erosively damage the surrounding hardware., Comment: 6 pages, 5 figures
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- 2021
7. Actualisatie teeltvoorschriften wratziekte : Inventarisatie expert-kennis op basis van interviews
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Peters, R., primary and Kromann, P., additional
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- 2024
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8. Availability and use of Standards in vaccine development
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Avumegah, Michael Selorm, Mattiuzzo, Giada, Särnefält, Anna, Page, Mark, Makar, Karen, Lathey, Janet, Kim, June, Yimer, Solomon Abebe, Craig, Danielle, Knezevic, Ivana, Bernasconi, Valentina, Kristiansen, Paul A., and Kromann, Ingrid
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- 2023
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9. Size matters in telomere biology disorders ‒ expanding phenotypic spectrum in patients with long or short telomeres
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Byrjalsen, Anna, Brainin, Anna Engell, Lund, Thomas Kromann, Andersen, Mette Klarskov, and Jelsig, Anne Marie
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- 2023
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10. Availability and use of Standards in vaccine development
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Michael Selorm Avumegah, Giada Mattiuzzo, Anna Särnefält, Mark Page, Karen Makar, Janet Lathey, June Kim, Solomon Abebe Yimer, Danielle Craig, Ivana Knezevic, Valentina Bernasconi, Paul A. Kristiansen, and Ingrid Kromann
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Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Reference materials are critical in assay development for calibrating and assessing their suitability. The devasting nature of the COVID-19 pandemic and subsequent proliferation of vaccine platforms and technologies has meant that there is even a greater need for standards for immunoassay development, which are critical to assess and compare vaccines’ responses. Equally important are the standards needed to control the vaccine manufacturing processes. Standardized vaccine characterization assays throughout process development are essential for a successful Chemistry, Manufacturing and Controls (CMC) strategy. In this perspective paper, we advocate for reference material incorporation into assays and their calibration to International Standards from preclinical vaccine development through control testing and provide insight into why this is necessary. We also provide information on the availability of WHO international antibody standards for CEPI-priority pathogens.
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- 2023
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11. Size matters in telomere biology disorders ‒ expanding phenotypic spectrum in patients with long or short telomeres
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Anna Byrjalsen, Anna Engell Brainin, Thomas Kromann Lund, Mette Klarskov Andersen, and Anne Marie Jelsig
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Telomere biology disorders ,Lung fibrosis ,Cancer predisposition ,Long telomeres ,Short telomeres ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Genetics ,QH426-470 - Abstract
Abstract The end of each chromosome consists of a DNA region termed the telomeres. The telomeres serve as a protective shield against degradation of the coding DNA sequence, as the DNA strand inevitably ‒ with each cell division ‒ is shortened. Inherited genetic variants cause telomere biology disorders when located in genes (e.g. DKC1, RTEL1, TERC, TERT) playing a role in the function and maintenance of the telomeres. Subsequently patients with telomere biology disorders associated with both too short or too long telomeres have been recognized. Patients with telomere biology disorders associated with short telomeres are at increased risk of dyskeratosis congenita (nail dystrophy, oral leukoplakia, and hyper- or hypo-pigmentation of the skin), pulmonary fibrosis, hematologic disease (ranging from cytopenia to leukemia) and in rare cases very severe multiorgan manifestations and early death. Patients with telomere biology disorders associated with too long telomeres have in recent years been found to confer an increased risk of melanoma and chronic lymphocytic leukemia. Despite this, many patients have an apparently isolated manifestation rendering telomere biology disorders most likely underdiagnosed. The complexity of telomere biology disorders and many causative genes makes it difficult to design a surveillance program which will ensure identification of early onset disease manifestation without overtreatment.
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- 2023
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12. Clinical Characteristics and Management of Children and Adults with Neurofibromatosis Type 1 and Plexiform Neurofibromas in Denmark: A Nationwide Study
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Ejerskov, Cecilie, Farholt, Stense, Nielsen, Flemming Secher Kromann, Berg, Ingunn, Thomasen, Stine Bogetofte, Udupi, Aparna, Ågesen, Trude, de Fine Licht, Sofie, and Handrup, Mette Møller
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- 2023
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13. Renin–angiotensin–system inhibitors and the risk of exacerbations in chronic obstructive pulmonary disease: a nationwide registry study
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Pradeesh Sivapalan, Rikke Sørensen, Josefin Eklöf, Jens-Ulrik Stæhr Jensen, Tor Biering-Sørensen, Lars Pedersen, Ole Hilberg, Tobias Wirenfeldt Klausen, Caroline Hedsund, Frida Vilstrup, Christian Kjer Heerfordt, Peter Kamstrup, Shailesh Kolekar, Thomas Kromann Lund, and Kristoffer Grundtvig Skaarup
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Medicine ,Diseases of the respiratory system ,RC705-779 - Abstract
Objective The renin–angiotensin system (RAS) has been shown to play a role in the pathogenesis of chronic obstructive pulmonary disease (COPD) because of the inflammatory properties of the system. Many patients with COPD use RAS-inhibiting (RASi) treatment. The aim was to determine the association between treatment with RASi and the risk of acute exacerbations and mortality in patients with severe COPD.Methods Active comparator analysis by propensity-score matching. Data were collected in Danish national registries, containing complete information on health data, prescriptions, hospital admissions and outpatient clinic visits. Patients with COPD (n=38 862) were matched by propensity score on known predictors of the outcome. One group was exposed to RASi treatment (cases) and the other was exposed to bendroflumethiazide as an active comparator in the primary analysis.Results The use of RASi was associated with a reduced risk of exacerbations or death in the active comparator analysis at 12 months follow-up (HR 0.86, 95% CI 0.78 to 0.95). Similar results were evident in a sensitivity analysis of the propensity-score-matched population (HR 0.89, 95% CI 0.83 to 0.94) and in an adjusted Cox proportional hazards model (HR 0.93, 95% CI 0.89 to 0.98).Conclusion In the current study, we found that the use of RASi treatment was associated with a consistently lower risk of acute exacerbations and death in patients with COPD. Explanations to these findings include real effect, uncontrolled biases, and—less likely—chance findings.
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- 2023
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14. Incidence and severity of SARS-CoV-2 infection in lung transplant recipients in the Omicron era
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Neval Ete Wareham, Sebastian Rask Hamm, Regitze Hertz Liebermann, Dina Leth Møller, Laurids Brandt Laursen-Keldorff, Andreas Runge Poulsen, Thomas Kromann Lund, Kristine Jensen, Hans Henrik L. Schultz, Michael Perch, and Susanne Dam Nielsen
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lung transplantation ,COVID-19 ,SARS-CoV-2 ,Omicron ,Surgery ,RD1-811 ,Specialties of internal medicine ,RC581-951 - Abstract
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection may cause serious illness in lung transplant recipients. We aimed to investigate incidence and severity of SARS-CoV-2 infection in lung transplant recipients in the Omicron era. We conducted a retrospective study investigating COVID-19 incidence and outcomes among lung transplant recipients between December 27, 2021, and October 31, 2022, in Denmark. We performed COX regression analysis of potential risk factors with hospitalization as an endpoint. Among 236 included patients, 108 had a first positive SARS-CoV-2 polymerase chain reaction during a total of 133 person-years of follow-up, resulting in an incidence rate of 813 per 1000 person-years (95% confidence intervals (CI) 670–977). The cumulative incidence of hospitalization was 24.1% (95% CI 26-32.1) and admission to the intensive care unit was 3.7% (95% CI 0.1–6.3). The 30-day mortality of recipients with a SARS-CoV-2 infection was 0.9% (95% CI 0–2.7). We found that the incidence rate of patients with SARS-CoV-2 infection was markedly higher, whereas the mortality rate was lower in the omicron era compared to earlier reports for lung transplant recipients conducted in the delta era. On the other hand, a substantial proportion of patients were hospitalized, suggesting a continuous impact on this patient population.
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- 2023
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15. Clinical Characteristics and Management of Children and Adults with Neurofibromatosis Type 1 and Plexiform Neurofibromas in Denmark: A Nationwide Study
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Cecilie Ejerskov, Stense Farholt, Flemming Secher Kromann Nielsen, Ingunn Berg, Stine Bogetofte Thomasen, Aparna Udupi, Trude Ågesen, Sofie de Fine Licht, and Mette Møller Handrup
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Epidemiology ,Malignant peripheral nerve sheath tumour ,Neurofibromatosis type 1 ,Plexiform neurofibromas ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Introduction Plexiform neurofibromas (PN) are benign nerve sheath tumours that are a frequent and potentially debilitating complication in patients with neurofibromatosis type 1 (NF1). The objective of this study was to describe the natural history of PN in children, adolescents and adults with NF1. Methods This was a nationwide, longitudinal cohort study of patients with NF1 under observation at the two national centres of NF1 expertise in Denmark between 2000 and 2020. Patient and clinical characteristics were documented from individual medical records. Results A total of 1099 patients with NF1 were included. Overall, 12% (35/296) of paediatric patients and 21% (172/803) of adult patients had ≥ 1 large PN (≥ 3 cm). Approximately half of patients with a large PN had ≥ 1 symptomatic PN. The most frequent symptoms were pain, neurological deficits, cosmetic issues, disfigurement, compression, increased psychosocial burden and vision loss. Clinical evaluations of PN size were available for 40 PN in 34 paediatric patients and 191 PN in 159 adult patients with large PN. Surgery (complete resection or debulking) was performed in 38% (15/40) of PN in paediatric patients and 45% (86/191) in adult patients. In addition, 35% of PN in paediatric patients and 33% in adult patients were inoperable. In a subgroup analysis, the overall PN size increased 1.06-fold per year. Malignant peripheral nerve sheath tumours (MPNST) were diagnosed in 21 patients (two paediatric and 19 adult patients). Conclusions This study shows that PN are common, their size and prevalence increase with age, many are often inoperable and pain and other symptoms are frequently associated. The results highlight the severe sequelae and unmet need for alternatives to analgesia and surgery in patients with PN.
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- 2022
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16. In vivo models of Escherichia coli infection in poultry
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Sofie Kromann and Henrik Elvang Jensen
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Animal models ,APEC ,Colibacillosis ,E. coli ,Experimental models ,Infection models ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Escherichia coli represents a significant challenge to the poultry industry due to compromised animal welfare, vast productivity losses, elevated mortality, and increased use of antimicrobial compounds. Therefore, effective preventive strategies and insight into the pathogenesis and disease mechanisms of colibacillosis are essential to secure a healthy poultry production. Consequently, discriminative in vivo models of colibacillosis are prerequisite tools for evaluating e.g., preventive measures, exploring novel treatments and understanding disease development. Numerous models of colibacillosis are applied for experimental studies in poultry. Yet, few studies provide a proper characterisation of the model enabling other authors to reproduce experiments or use the model in general. The present paper provides a literature review on avian in vivo models of primary colibacillosis.
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- 2022
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17. The effect of an integrated care intervention of multidisciplinary mental health treatment and employment services for trauma-affected refugees: study protocol for a randomised controlled trial
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Maja Bruhn, Henriette Laugesen, Matilde Kromann-Larsen, Cathrine Selnes Trevino, Lene Eplov, Carsten Hjorthøj, and Jessica Carlsson
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Refugee ,Trauma ,Post-traumatic stress disorder ,PTSD ,Cross-sectoral ,Integrated care ,Medicine (General) ,R5-920 - Abstract
Abstract Background The complexity of past trauma and ongoing post-migration stressors challenges the existing mental health treatment for trauma-affected refugees. Therefore, interventions are needed to accommodate these complex challenges in mental health treatment. This study examines the effect of an add-on integrated care intervention compared to treatment as usual (TAU) for trauma-affected refugees in a randomised controlled trial (RCT). Methods The study is carried out at a Danish outpatient clinic and will include 197 treatment-seeking refugees with post-traumatic stress disorder (PTSD) who are unemployed and affiliated with municipal employment services. Mental health TAU comprises 10 sessions with a medical doctor (pharmacological treatment and psychoeducation) and 16–20 sessions with a psychologist (manual-based cognitive behavioural therapy) for a period of 8 to 12 months. The add-on intervention strengthens coordination between mental health treatment and employment interventions with three cross-sectoral collaborative meetings during the mental health treatment. The integrated care intervention draws attention to the bidirectional impact of mental health problems and post-migration stressors and focuses on cross-sectoral shared plans. The primary outcome is functioning, measured by WHODAS 2.0, the interviewer-administered 12-item version, with secondary outcomes measuring quality of life, mental health symptoms, and post-migration stressors. Discussion The RCT is novel in intervention design for trauma-affected refugees and will bring forward new perspectives and knowledge of integrated care interventions for trauma-affected refugees. The integrated care intervention is expected to reduce post-migration stressors that negatively affect the treatment of trauma-related mental health problems, thereby improving preconditions for enhanced treatment outcomes. The intervention builds on existing practices in the Danish healthcare and employment sectors, which ensures high scalability and sustainability for future practices. Trial registration ClinicalTrials.gov Identifier: NCT04244864 , registered 28 January 2020. Protocol version: 17 September 2022, version 2.
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- 2022
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18. Interference based optical instrument for high-throughput characterization of nanoparticles in complex biofluids
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Kovsted Carl Emil Schøier, Li Yingchao, Kristiansen Lasse Pærgård, Frisvad Jeppe Revall, Botha Jaco, and Kromann Emil Boye
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extracellular vesicles ,light scattering ,label-free ,Microbiology ,QR1-502 ,Physiology ,QP1-981 ,Zoology ,QL1-991 - Published
- 2024
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19. Empirical corrections and pair interaction energies in the fragment molecular orbital method
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Fedorov, Dmitri G., Kromann, Jimmy C., and Jensen, Jan H.
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Physics - Chemical Physics - Abstract
The energy and analytic gradient are developed for FMO combined with the Hartree-Fock method augmented with three empirical corrections (HF-3c). The auxiliary basis set approach to FMO is extended to perform pair interaction energy decomposition analysis. The FMO accuracy is evaluated for several typical systems including 3 proteins. Pair interaction energies computed with different approaches in FMO are compared for a water cluster and protein-ligand complexes., Comment: Revised version accepted in Chemical Physics Letters
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- 2018
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20. Longitudinal study on background lesions in broiler breeder flocks and their progeny, and genomic characterisation of Escherichia coli
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Sofie Kromann, Sharmin Baig, Marc Stegger, Rikke Heidemann Olsen, Anders Miki Bojesen, Henrik Elvang Jensen, and Ida Thøfner
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Mortality ,pathology ,antimicrobial resistance ,Escherichia coli ,colibacillosis ,whole-genome sequencing ,Veterinary medicine ,SF600-1100 - Abstract
Abstract In broiler breeders, background mortality is rarely addressed, however, it represents the death of a vast number of birds, a constant productivity loss, welfare concerns and it might affect chick quality. The study aimed to unveil lesions leading to mortality in a study population perceived as healthy, combined with whole-genome sequencing (WGS) of Escherichia coli, a well-known contributor to disease problems in poultry. Broiler breeders (n = 340) originating from three distinct, putative healthy flocks and their progeny (n = 154) were subjected to a comprehensive post-mortem examination, bacteriological sampling, and sequencing of 77 E. coli isolates. Productivity data confirmed an exemplary health status of the enrolled flocks, and post-mortem examination further verified the absence of general disease problems. Among the submitted broiler breeders, exudative peritonitis (31.2%) was the most frequent lesion linked to infectious disease, whereas airsacculitis, pericarditis, perihepatitis, and salpingitis occurred in 18.5%, 3.5%, 3.8% and 17%, respectively. Yolksacculitis occurred in 15.6% of the broilers, whilst pericarditis, perihepatitis and peritonitis were diagnosed in 9.7%, 7.1% and 9.1%, respectively. WGS revealed a diverse population where ST95 dominated the population retrieved from broiler breeders, whereas ST10 was highly prevalent among broilers. Both lineages could be isolated from extraintestinal sites of birds without lesions indicative of infection. In general, the genetic diversity within flocks was comparable to the diversity between farms, and the overall occurrence of resistance markers was low. In conclusion, a comprehensive insight into lesions associated with background mortality is presented, together with a vast diversity of E. coli isolated from extraintestinal sites during a non-outbreak situation.
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- 2022
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21. Preoperative blood pressure targets and effect on hemodynamics in pheochromocytoma and paraganglioma
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Randi Ugleholdt, Åse Krogh Rasmussen, Pernille A H Haderslev, Bjarne Kromann-Andersen, and Claus Larsen Feltoft
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blood pressure target ,hemodynamics ,pheochromocytoma ,phenoxybenzamine ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Patients with pheochromocytoma and paraganglioma (PPGL) are treated with α-adrenoceptor antagonists to improve peroperative hemodynamics. However, preoperative blood pressure targets differ between institutions. We retrospectively compared per- and postoperative hemodynamics in 30 patients with PPGL that were pretreated with phenoxybenzamine aiming at different blood pressure targets at two separate endocrine departments. All patients were subsequently undergoing laparoscopic surgery at Department of Urology, Herlev University hospital. Fourteen patients were treated targeting to symptomatic and significant orthostatic hypotension and 16 patients to a seated blood pressure below 130/80 mmHg. As a control group, we included 34 patients undergoing laparoscopic adrenalectomy for other reasons. The group titrated to orthostatic hypotension required a higher dose of phenoxybenzamine to achieve the blood pressure target. This group had less intraoperative systolic and diastolic blood pressure fluctuation (Mann–Whitney U test; P < 0.05) and less periods with heart rate above 100 b.p.m. (Mann–Whitney U test; P = 0.04) as compared to the group with a preoperative blood pressure target below 130/80 mmHg. Peroperative use of intravenous fluids were similar between the two groups, but postoperatively more intravenous fluids were administered in the group with a target of ortostatism. Overall, the control group was more hemodynamic stable as compared to either group treated for PPGL. We conclude that phenoxybenzamine pretreatment targeting ortostatic hypotension may improve peroperative hemodynamic stability but causes a higher postoperative requirement for intravenous fluids. Overall, PPGL surgery is related to greater hemodynamic instability compared to adrenalectomy for other reasons.
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- 2022
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22. Assessment of automated assays for serum amyloid A, haptoglobin (PIT54) and basic biochemistry in broiler breeders experimentally infected with Escherichia coli
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Sofie Kromann, Rikke Heidemann Olsen, Anders Miki Bojesen, Henrik Elvang Jensen, and Ida Thøfner
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Blood biochemistry ,biomarker ,acute phase protein ,serum amyloid A ,haptoglobin ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Biomarkers of inflammation are valuable tools for health status evaluation in numerous species. However, in poultry, methods for measuring acute phase proteins (APP) are sparse and rely on manual laboratory labour reserving these parameters mainly for research studies with APP as a focus point. To extend the use of APP beyond tightly focused research studies, blood from experimentally infected and control hens was analysed using equipment available in many veterinary clinics in order to identify easily accessible biomarkers of infection. Blood samples from broiler breeders (n = 30) inoculated intratracheally with either Escherichia coli or sterile vehicle were randomly selected at 2, 4 and 7 days post-infection (dpi) and subjected to biochemical analysis. Samples for bacteriological testing were collected, and all animals were subjected to a full necropsy for disease confirmation. Significantly higher levels of serum amyloid A were evident in the infected birds at 2 and 4 dpi (p
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- 2022
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23. Longitudinal study on background lesions in broiler breeder flocks and their progeny, and genomic characterisation of Escherichia coli
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Kromann, Sofie, Baig, Sharmin, Stegger, Marc, Olsen, Rikke Heidemann, Bojesen, Anders Miki, Jensen, Henrik Elvang, and Thøfner, Ida
- Published
- 2022
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- View/download PDF
24. Assessment of automated assays for serum amyloid A, haptoglobin (PIT54) and basic biochemistry in broiler breeders experimentally infected with Escherichia coli
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Kromann, Sofie, Olsen, Rikke Heidemann, Bojesen, Anders Miki, Jensen, Henrik Elvang, and Thøfner, Ida
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- 2022
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25. The effect of an integrated care intervention of multidisciplinary mental health treatment and employment services for trauma-affected refugees: study protocol for a randomised controlled trial
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Bruhn, Maja, Laugesen, Henriette, Kromann-Larsen, Matilde, Trevino, Cathrine Selnes, Eplov, Lene, Hjorthøj, Carsten, and Carlsson, Jessica
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- 2022
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26. Agroecological settings and seed recycling account only partially for potato seed degeneration in Ecuador
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Navarrete, Israel, López, Victoria, Andrade-Piedra, Jorge L., Almekinders, Conny J. M., Kromann, Peter, and Struik, Paul C.
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- 2022
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27. In vivo models of Escherichia coli infection in poultry
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Kromann, Sofie and Jensen, Henrik Elvang
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- 2022
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28. Falls and fractures associated with type 2 diabetic polyneuropathy: A cross‐sectional nationwide questionnaire study
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Karolina Snopek Khan, Diana Hedevang Christensen, Sia Kromann Nicolaisen, Sandra Sif Gylfadottir, Troels Staehelin Jensen, Jens Steen Nielsen, Reimar Wernich Thomsen, and Henning Andersen
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Diabetic polyneuropathy ,Falls ,Fractures ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Abstract Aims/Introduction To examine the prevalence of falls and fractures, and the association with symptoms of diabetic polyneuropathy (DPN) in patients with recently diagnosed type 2 diabetes. Materials and Methods A detailed questionnaire on neuropathy symptoms and falls was sent to 6,726 patients enrolled in the Danish Center for Strategic Research in Type 2 Diabetes cohort (median age 65 years, diabetes duration 4.6 years). Complete data on fractures and patient characteristics were ascertained from population‐based health registries. We defined possible DPN as a score ≥4 on the Michigan Neuropathy Screening Instruments questionnaire. Using Poisson regression analyses, we estimated the adjusted prevalence ratio (aPR) of falls and fractures, comparing patients with and without DPN. Results In total, 5,359 patients (80%) answered the questions on the Michigan Neuropathy Screening Instruments questionnaire and falls. Within the year preceding the questionnaire response, 17% (n = 933) reported at least one fall and 1.4% (n = 76) suffered from a fracture. The prevalence ratio of falls was substantially increased in patients with possible DPN compared with those without (aPR 2.33, 95% confidence interval [CI] 2.06–2.63). The prevalence ratio increased with the number of falls from aPR 1.51 (95% CI 1.22–1.89) for one fall to aPR 5.89 (95% CI 3.84–9.05) for four or more falls within the preceding year. Possible DPN was associated with a slightly although non‐significantly increased risk of fractures (aPR 1.32, 95% CI 0.75–2.33). Conclusions Patients with recently diagnosed type 2 diabetes and symptoms of DPN had a highly increased risk of falling. These results emphasize the need for preventive interventions to reduce fall risk among patients with type 2 diabetes and possible DPN.
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- 2021
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29. Development of an aerogenous Escherichia coli infection model in adult broiler breeders
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Sofie Kromann, Rikke Heidemann Olsen, Anders Miki Bojesen, Henrik Elvang Jensen, and Ida Thøfner
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Medicine ,Science - Abstract
Abstract Escherichia coli constitutes an immense challenge to the poultry industry due to its devastating effect on productivity, mortality, and carcass condemnations. To aid future studies on disease mechanisms and interventions, an aerogenous infection model was established in adult broiler breeders. Hens (n = 120) were randomly allocated into six groups receiving either aerosolised E. coli or vehicle, or intratracheal E. coli or vehicle. Replication of aerosol inoculation was performed on distinct days. Alternating euthanasia time points were predetermined in order to evaluate the progression of the disease. All animals were thoroughly necropsied, and bacteriological samples were collected as well as tissues for histopathology. Birds inoculated with E. coli exhibited clinical signs and developed characteristic gross and histopathological lesions of colibacillosis, including splenic fibrinoid necrosis, folliculitis, polyserositis and impaction of parabronchi with fibrinoheterophilic exudate and necrotic debris, as well as positive in situ localisation of intralesional E. coli by immunohistochemistry. This study presents a successful development of a discriminative colibacillosis model through aerosol inoculation of adult broiler breeders. Gross and histopathological lesions characteristic of colibacillosis were established in two independent experiments.
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- 2021
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30. The Potato of the Future: Opportunities and Challenges in Sustainable Agri-food Systems
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Devaux, André, Goffart, Jean-Pierre, Kromann, Peter, Andrade-Piedra, Jorge, Polar, Vivian, and Hareau, Guy
- Published
- 2021
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31. Ungeperspektiver på læringsfællesskaber i FGU
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Ida Schwartz, Lene Kullen Hansen, Morten Kromann Nielsen, and Tilde Mardahl-Hansen
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FGU, social udsathed, ungdomsuddannelse, læringsfællesskaber, ungeperspektiver, inklusion ,Theory and practice of education ,LB5-3640 - Abstract
Resumé FGU er en relativt ny uddannelse skabt for at understøtte, at unge i udsatte positioner kommer videre fra folkeskole til uddannelse eller arbejde. FGU modtager elever med forskellige negative erfaringer for deltagelse i skole eller uddannelse. Der er knyttet store uddannelsespolitiske ambitioner til FGU-uddannelsen om at skabe læringsfællesskaber, der kan rumme elever med mange forskellige forudsætninger. Artiklen tager afsæt i et teoretisk begreb om læring gennem social deltagelse og sætter gennem analyser af unges perspektiver på deres deltagelse i en FGU-uddannelse fokus på, hvordan unge (igen) kommer i ’position som lærende sociale deltagere’. Der tages udgangspunkt i en forståelse af social udsathed som situeret i komplekse sociale sammenhænge, hvor ikke mindst uddannelsesmæssige deltagelsesbetingelser spiller ind. Dermed anlægges et syn på social udsathed som en livssituation i stadig forandring afhængig af skiftende sociale betingelser. Artiklen analyserer, hvordan unge tillægger skolelivets fællesskaber, læringsaktiviteter og egen indflydelse betydning. En kontekstuel tilgang knytter udsathed til positioner i social praksis og det skærper et blik for, hvordan unge overskrider oplevelser af personlig usikkerhed og sårbarhed gennem aktiv medskabelse af de uddannelsesmæssige læringsfællesskaber, de er en del af. Abstract Learning Communities seen from the Perspectives of Young Adults FGU is a relatively new education which was created for the purpose of supporting young people in exposed positions in their further path – from lower secondary school to education or work. FGU receives students with various negative experiences from school or educational participation. The FGU education is linked with considerable education-policy ambitions with respect to the creation of learning communities capable of embracing students of many different educational backgrounds. The article takes a theoretical concept on learning through social participation as its point of departure and, by way of analyses of young people’s perspectives on their participation in the FGU education, it focuses on how young people can (once again) be brought into ‘position as learning social participants’. The point of departure is an understanding of social vulnerability as situated in complex social contexts in which not least educational participation relations come into play. From a theoretical perspective on learning through social participation, the article analyses how young people will attach meaning to school-life communities, learning activities and their own influence. A contextual understanding of vulnerability which, linked with positions within social practice, offers a prospect of how young people have the possibilities of exceeding personal experiences of insecurity and vulnerability through contributing to the communities of school life.
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- 2022
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32. A novel physiological role for ARF1 in the formation of bidirectional tubules from the Golgi
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Bottanelli, Francesca, Kilian, Nicole, Ernst, Andreas M, Rivera-Molina, Felix, Schroeder, Lena K, Kromann, Emil B, Lessard, Mark D, Erdmann, Roman S, Schepartz, Alanna, Baddeley, David, Bewersdorf, Joerg, Toomre, Derek, and Rothman, James E
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Genetics ,Biotechnology ,ADP-Ribosylation Factor 1 ,COP-Coated Vesicles ,Clathrin ,Coat Protein Complex I ,GTP Phosphohydrolases ,Golgi Apparatus ,Guanosine Triphosphate ,HeLa Cells ,Humans ,Hydrolysis ,Intracellular Membranes ,Hela Cells ,Medical and Health Sciences ,Developmental Biology ,Biochemistry and cell biology - Abstract
Capitalizing on CRISPR/Cas9 gene-editing techniques and super-resolution nanoscopy, we explore the role of the small GTPase ARF1 in mediating transport steps at the Golgi. Besides its well-established role in generating COPI vesicles, we find that ARF1 is also involved in the formation of long (∼3 µm), thin (∼110 nm diameter) tubular carriers. The anterograde and retrograde tubular carriers are both largely free of the classical Golgi coat proteins coatomer (COPI) and clathrin. Instead, they contain ARF1 along their entire length at a density estimated to be in the range of close packing. Experiments using a mutant form of ARF1 affecting GTP hydrolysis suggest that ARF1[GTP] is functionally required for the tubules to form. Dynamic confocal and stimulated emission depletion imaging shows that ARF1-rich tubular compartments fall into two distinct classes containing 1) anterograde cargoes and clathrin clusters or 2) retrograde cargoes and coatomer clusters.
- Published
- 2017
33. Actualisatie teeltvoorschriften wratziekte : Inventarisatie expert-kennis op basis van interviews
- Author
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Peters, R., Kromann, P., Peters, R., and Kromann, P.
- Abstract
Het huidige teeltvoorschrift voor wratziekte stamt uit 1990. In deze teeltvoorschriften staat onder andere dat voor wratziekte pathotype 18 een zogenaamd wratziekte-kerngebied moet worden ingericht met een radius van 1 km. Verschillende ontwikkelingen hebben aanleiding gegeven om te overwegen of het teeltvoorschrift voor wratziekte (en in het bijzonder de 1 km radius regel) geactualiseerd dient te worden. Deze ontwikkelingen zijn de volgende: (1) Toegenomen gebruik van groenbemesters/rustgewassen, (2) weinig (partieel resistente rassen tegen nieuw pathotype 38, (3) nieuwe Europese richtlijn quarantaineorganismen (Uitvoeringsverordening (EU) 2022/1195) welke specifiek stelt dat een bufferzone dient te worden ingesteld gebaseerd op de wetenschappelijke kennis van de biologie van het organisme. In recente jaren (2018/2019) is veel moleculair (genetisch) onderzoek verricht aan Synchytrium endobioticum, de veroorzaker van wratziekte. Zo is de genetische diversiteit en populatiestructuur, alswel als een aantal avirulentie- (Avr) en resistentie- (R) genen in kaart gebracht. Hieruit blijkt onder meer dat door selectiedruk de virulente van wratziekte-isolaten kan toenemen, en dat op basis van de mogelijke combinaties van virulentiegenen er veel meer mogelijke pathotypen zijn dan de momenteel gehanteerde 40. Op het vlak van moleculaire detectie wordt er gewerkt aan moleculaire pathotypering (het bepalen van het pathotype op basis van genetische informatie. Hiervoor wordt onder andere samengewerkt met een Canadese onderzoeksgroep op het gebied van een ‘machine learning tool’, die het moleculair pathotyperen op termijn zal vergemakkelijken. Kortom, er is in recente jaren veel moleculair onderzoek verricht aan wratziekte waardoor er veel kennis over het organisme is bijgekomen. Met name voor moleculaire detectie en pathotypering blijft dit type onderzoek echter nodig om ook in de toekomst wratziekte het hoofd te kunnen bieden. Wat betreft de verspreiding van wratziekte via aarda
- Published
- 2024
34. Inzicht in advisering voor gewasbescherming en de loskoppeling van advies en verkoop van gewasbeschermingsmiddelen : Resultaten van internationale vragenlijst
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Costaz, T., Kromann, P., Costaz, T., and Kromann, P.
- Published
- 2024
35. Digital Health Interventions for Musculoskeletal Pain Conditions: Systematic Review and Meta-analysis of Randomized Controlled Trials
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Pim Peter Valentijn, Liza Tymchenko, Teddy Jacobson, Jakob Kromann, Claus W Biermann, Mohamed Atef AlMoslemany, and Rosa Ymkje Arends
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundDigital health solutions can provide populations with musculoskeletal pain with high-reach, low-cost, easily accessible, and scalable patient education and self-management interventions that meet the time and resource restrictions. ObjectiveThe main objective of this study was to determine the effectiveness of digital health interventions for people with musculoskeletal pain conditions (ie, low back pain, neck pain, shoulder pain, knee pain, elbow pain, ankle pain, and whiplash). MethodsA systematic review and meta-analysis was conducted. We searched PubMed and Cochrane Central Register of Controlled Trials (from 1974 to August 2021) and selected randomized controlled trials of digital health interventions in the target population of patients with musculoskeletal pain with a minimum follow-up of 1 month. A total of 2 researchers independently screened and extracted the data. ResultsA total of 56 eligible studies were included covering 9359 participants, with a mean follow-up of 25 (SD 15.48) weeks. In moderate-quality evidence, digital health interventions had a small effect on pain (standardized mean difference [SMD] 0.19, 95% CI 0.06-0.32), disability (SMD 0.14, 95% CI 0.03-0.25), quality of life (SMD 0.22, 95% CI 0.07-0.36), emotional functioning (SMD 0.24, 95% CI 0.12-0.35), and self-management (SMD 0.14, 95% CI 0.05-0.24). ConclusionsModerate-quality evidence supports the conclusion that digital health interventions are effective in reducing pain and improving functioning and self-management of musculoskeletal pain conditions. Low-quality evidence indicates that digital health interventions can improve the quality of life and global treatment. Little research has been conducted on the influence of digital health on expenses, knowledge, overall improvement, range of motion, muscle strength, and implementation fidelity. Trial RegistrationPROSPERO CRD42022307504; https://tinyurl.com/2cd25hus
- Published
- 2022
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36. Alternative Rooting Methods for Medicinal Cannabis Cultivation in Denmark—Preliminary Results
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Bruno Trevenzoli Favero, Jacob Kromann Salomonsen, and Henrik Lütken
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C. sativa ,chimeric ,Rhizobium rhizogenes ,root ,rooting phenotype ,WinRhizo ,Botany ,QK1-989 - Abstract
Cannabis sativa L. is typically propagated through micropropagation or vegetative cuttings, but the use of root-inducing hormones, such as indole-3-butyric acid (IBA), is not allowed for growing medicinal cannabis in Denmark. This study examined alternative rooting treatments, including Rhizobium rhizogenes inoculation, water-only as well as IBA treatments, in eight cannabis cultivars. PCR on root tissue suggested that 19% of R. rhizogenes-inoculated cuttings were transformed. These were derived from “Herijuana”, “Wild Thailand”, “Motherlode Kush”, and “Bruce Banner”, indicating a variation in cultivar susceptibility toward R. rhizogenes. A 100% rooting success was achieved regardless of cultivar and treatment, suggesting that alternative rooting agents are not required for efficient vegetative propagation. However, rooted cuttings differed in shoot morphology with improved shoot growth in cuttings treated with R. rhizogenes (195 ± 7 mm) or water (185 ± 7 mm) while inhibited shoot growth under IBA treatment (123 ± 6 mm). This could have advantageous economic implications should cuttings not treated with hormone reach maturity faster than those exposed to the hormone, thereby contributing to completing a full growing cycle more effectively. IBA exposure increased root length, root dry weight, and root/shoot dry weight ratio compared to cuttings treated with R. rhizogenes or water but simultaneously inhibited shoot growth compared to these.
- Published
- 2023
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37. Ultra-High Resolution 3D Imaging of Whole Cells.
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Huang, Fang, Sirinakis, George, Allgeyer, Edward S, Schroeder, Lena K, Duim, Whitney C, Kromann, Emil B, Phan, Thomy, Rivera-Molina, Felix E, Myers, Jordan R, Irnov, Irnov, Lessard, Mark, Zhang, Yongdeng, Handel, Mary Ann, Jacobs-Wagner, Christine, Lusk, C Patrick, Rothman, James E, Toomre, Derek, Booth, Martin J, and Bewersdorf, Joerg
- Subjects
Spermatocytes ,Synaptonemal Complex ,COP-Coated Vesicles ,Golgi Apparatus ,Animals ,Mice ,Bacteriophages ,Microscopy ,Fluorescence ,Cytological Techniques ,Male ,Single Molecule Imaging ,Bioengineering ,Underpinning research ,1.1 Normal biological development and functioning ,1.5 Resources and infrastructure (underpinning) ,Generic health relevance ,Biological Sciences ,Medical and Health Sciences ,Developmental Biology - Abstract
Fluorescence nanoscopy, or super-resolution microscopy, has become an important tool in cell biological research. However, because of its usually inferior resolution in the depth direction (50-80 nm) and rapidly deteriorating resolution in thick samples, its practical biological application has been effectively limited to two dimensions and thin samples. Here, we present the development of whole-cell 4Pi single-molecule switching nanoscopy (W-4PiSMSN), an optical nanoscope that allows imaging of three-dimensional (3D) structures at 10- to 20-nm resolution throughout entire mammalian cells. We demonstrate the wide applicability of W-4PiSMSN across diverse research fields by imaging complex molecular architectures ranging from bacteriophages to nuclear pores, cilia, and synaptonemal complexes in large 3D cellular volumes.
- Published
- 2016
38. Two-colour live-cell nanoscale imaging of intracellular targets.
- Author
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Bottanelli, Francesca, Kromann, Emil B, Allgeyer, Edward S, Erdmann, Roman S, Wood Baguley, Stephanie, Sirinakis, George, Schepartz, Alanna, Baddeley, David, Toomre, Derek K, Rothman, James E, and Bewersdorf, Joerg
- Subjects
COS Cells ,Hela Cells ,Animals ,Cercopithecus aethiops ,Humans ,Rhodamines ,Luminescent Proteins ,Microscopy ,Fluorescence ,Nanotechnology ,Heterocyclic Compounds ,4 or More Rings ,Chlorocebus aethiops ,HeLa Cells ,Microscopy ,Fluorescence ,Heterocyclic Compounds ,or More Rings - Abstract
Stimulated emission depletion (STED) nanoscopy allows observations of subcellular dynamics at the nanoscale. Applications have, however, been severely limited by the lack of a versatile STED-compatible two-colour labelling strategy for intracellular targets in living cells. Here we demonstrate a universal labelling method based on the organic, membrane-permeable dyes SiR and ATTO590 as Halo and SNAP substrates. SiR and ATTO590 constitute the first suitable dye pair for two-colour STED imaging in living cells below 50 nm resolution. We show applications with mitochondria, endoplasmic reticulum, plasma membrane and Golgi-localized proteins, and demonstrate continuous acquisition for up to 3 min at 2-s time resolution.
- Published
- 2016
39. Trends in underlying causes of death in solid organ transplant recipients between 2010 and 2020: Using the CLASS method for determining specific causes of death
- Author
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Andreas Søborg, Joanne Reekie, Allan Rasmussen, Caspar Da Cunha-Bang, Finn Gustafsson, Kasper Rossing, Michael Perch, Paul Suno Krohn, Søren Schwartz Sørensen, Thomas Kromann Lund, Vibeke Rømming Sørensen, Christina Ekenberg, Louise Lundgren, Isabelle Paula Lodding, Kasper Sommerlund Moestrup, Jens Lundgren, and Neval Ete Wareham
- Subjects
Medicine ,Science - Abstract
Monitoring specific underlying causes of death in solid organ transplant (SOT) recipients is important in order to identify emerging trends and health challenges. This retrospective cohort study includes all SOT recipients transplanted at Rigshospitalet between January 1st, 2010 and December 31st, 2019. The underlying cause of death was determined using the newly developed Classification of Death Causes after Transplantation (CLASS) method. Cox regression analyses assessed risk factors for all-cause and cause-specific mortality. Of the 1774 SOT recipients included, 299 patients died during a total of 7511 person-years of follow-up (PYFU) with cancer (N = 57, 19%), graft rejection (N = 55, 18%) and infections (N = 52, 17%) being the most frequent causes of death. We observed a lower risk of all-cause death with increasing transplant calendar year (HR 0.91, 95% CI 0.86–0.96 per 1-year increase), alongside death from graft rejection (HR 0.84 per year, 95% CI 0.74–0.95) and death from infections (HR 0.86 per year, 95% CI 0.77–0.97). Further, there was a trend towards lower cumulative incidence of death from cardiovascular disease, graft failure and cancer in more recent years, while death from other organ specific and non-organ specific causes did not decrease. All-cause mortality among SOT recipients has decreased over the past decade, mainly due to a decrease in graft rejection- and infection-related deaths. Conversely, deaths from a broad range of other causes have remained unchanged, suggesting that cause of death among SOT recipients is increasingly diverse and warrants a multidisciplinary effort and attention in the future.
- Published
- 2022
40. Design and Rationale of a Scandinavian Multicenter Randomized Study Evaluating if Once-Daily Tacrolimus Versus Twice-Daily Cyclosporine Reduces the 3-year Incidence of Chronic Lung Allograft Dysfunction After Lung Transplantation (ScanCLAD Study)
- Author
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Dellgren, Göran, Lund, Thomas Kromann, Raivio, Peter, Leuckfeld, Inga, Svahn, Johan, Magnusson, Jesper, and Riise, Gerdt C.
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- 2020
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41. The Molecule Calculator: A web-server for fast quantum mechanics-based estimation of molecular properties
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Jensen, Jan H. and Kromann, Jimmy C.
- Subjects
Physics - Chemical Physics - Abstract
A new web-server called The Molecule Calculator (MolCalc) is presented. The entry page is a molecular editor (JSmol) for interactive molecule building. The resulting structure can then be used to estimate molecular properties such as heats of formation and other thermodynamic properties, vibrational frequencies and vibrational modes, and molecular orbitals and orbital energies. These properties are computed using the GAMESS program at either the RHF/STO-3G (orbitals and orbital energies) or PM3 level of theory (all other properties) in a matter of seconds or minutes depending on the size of the molecule. The results, though approximate, can help students develop a "chemical intuition" about how molecular structure affects molecular properties, without performing the underlying calculations by hand, a near impossible task for all but the simplest chemical systems., Comment: Service is no longer available
- Published
- 2013
42. Development of an aerogenous Escherichia coli infection model in adult broiler breeders
- Author
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Kromann, Sofie, Olsen, Rikke Heidemann, Bojesen, Anders Miki, Jensen, Henrik Elvang, and Thøfner, Ida
- Published
- 2021
- Full Text
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43. Performance of Polyethylene Vapor Barrier Systems in Temperate Climates
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Torben Valdbjørn Rasmussen, Tessa Kvist Hansen, Yvonne Shashoua, Lisbeth M. Ottosen, Louise Green Pedersen, Jens Kromann Nielsen, and Frederik R. Steenstrup
- Subjects
laboratory tests ,vapor barrier systems ,polyethylene ,aging ,virgin PE ,new PE ,Building construction ,TH1-9745 - Abstract
The performance of nine different vapor barrier systems comprising polyethylene (PE) membranes were assessed. The vapor barrier systems comprised membranes of virgin PE, 100% new PE, regenerated PE and multilayered virgin and regenerated PE. Membranes were joined either with tape suited to the individual system or an adhesive base on butyl rubber. The vapor barrier systems were evaluated and compared using standard laboratory tests. Chemical analytical techniques and physicomechanical tests were used. Mechanical properties were assessed using laboratory tests recommended by the harmonized standard EN 1385. Chemical analyses followed standard laboratory protocols performed with specialized equipment and visual examination. Chemical and mechanical properties were determined before and after exposure to an aging regime comprising 168 days at 70 °C in total. The chemical stability of the plastic present in each membrane was further evaluated after an additional exposure to an aging regime comprising 50 days followed by another 30 days at 70 °C. Additional aging indicated chemical changes in the membrane material with time. However, it was not possible to distinguish between aging properties for membranes containing virgin PE, 100% new PE, regenerated PE or multilayered virgin and regenerated PE.
- Published
- 2022
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44. Correction to: The Potato of the Future: Opportunities and Challenges in Sustainable Agri-food Systems
- Author
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Devaux, André, Goffart, Jean-Pierre, Kromann, Peter, Andrade-Piedra, Jorge, Polar, Vivian, and Hareau, Guy
- Published
- 2022
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45. WHAT-IF: an open-source decision support tool for water infrastructure investment planning within the water–energy–food–climate nexus
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R. Payet-Burin, M. Kromann, S. Pereira-Cardenal, K. M. Strzepek, and P. Bauer-Gottwein
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
Water infrastructure investment planning must consider the interdependencies within the water–energy–food nexus. Moreover, uncertain future climate, evolving socio-economic context, and stakeholders with conflicting interests, lead to a highly complex decision problem. Therefore, there is a need for decision support tools to objectively determine the value of investments, considering the impacts on different groups of actors, and the risks linked to uncertainties. We present a new open-source hydro-economic optimization model, incorporating in a holistic framework, representations of the water, agriculture, and power systems. The model represents the joint development of nexus-related infrastructure and policies and evaluates their economic impact, as well as the risks linked to uncertainties in future climate and socio-economic development. We apply the methodology in the Zambezi River basin, a major African basin shared by eight countries, in which multiple investment opportunities exist, including new hydropower plants, new or resized reservoirs, development of irrigation agriculture, and investments into the power grid. We show that it is crucial to consider the links between the different systems when evaluating the impacts of climate change and socio-economic development, which will ultimately influence investment decisions. We find that climate change could induce economic losses of up to USD 2.3 billion per year in the current system. We show that the value of the hydropower development plan is sensitive to future fuel prices, carbon pricing policies, the capital cost of solar technologies, and climate change. Similarly, we show that the value of the irrigation development plan is sensitive to the evolution of crop yields, world market crop prices, and climate change. Finally, we evaluate the opportunity costs of restoring the natural floods in the Zambezi Delta; we find limited economic trade-offs under the current climate, but major trade-offs with irrigation and hydropower generation under the driest climate change scenario.
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- 2019
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46. In vitro synergy of sertraline and tetracycline cannot be reproduced in pigs orally challenged with a tetracycline resistant Escherichia coli
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Sofie Kromann, Anna Hvidtfeldt, Mette Boye, Dorte Bratbo Sørensen, Steffen Jørgensen, Jens Peter Nielsen, and Rikke Heidemann Olsen
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Antimicrobial resistance ,Tetracycline ,Sertraline ,Synergy ,Pigs ,E. coli ,Microbiology ,QR1-502 - Abstract
Abstract Background Antimicrobial helper-compounds may reverse antimicrobial resistance. Sertraline, a antidepressant drug, has been suggested as a tetracycline helper-compound. Tetracycline is the preferred antimicrobial for treatment of enteric diseases in pigs. This study is the first to evaluate the potency of sertraline as a tetracycline adjuvant in pigs. Methods Forty-eight nursery pigs were divided into four treatment groups: Tetracycline, sertraline, tetracycline/sertraline or un-medicated control. Fecal and ileal samples were obtained before treatment, 48 h and nine days after five days of treatment, respectively. Colony forming units (CFU) of tetracycline resistant coliforms in each sample (ileal or fecal) and CFU of an orally inoculated tetracycline-resistant strain of Escherichia coli were determined at each sampling point. The microbiome of fecal and ileal and samples was analyzed by sequencing of the 16S V3-V4 region. Results The results did not provide evidence that sertraline in combination with tetracycline has any impact on tetracycline resistant bacteria in either fecal or ileum samples, while in the tetracycline treated group of pigs, an increase in the prevalence of a tetracycline resistant indicator strain of Escherichia coli shortly after ended five-day treatment was observed. The ileal samples obtained shortly after ended treatment showed treatment-associated changes in the composition of the microbiota in the groups of pigs treated with tetracycline (+/−) sertraline. While tetracycline treatment increased the abundance in the reads of E. coli, sertraline/tetracycline treatment led to increased abundances of Streptococcus spp. and decreased abundances of Lactobacillus spp. However, all observed differences (on CFU counts and microbiota composition) between groups shortly after treatment had diminished in less than two weeks after last treatment day. Conclusions Sertraline (+/−) tetracycline treatment did not reduce the long-term level of tetracycline-resistant bacteria in the feces or small intestine contents of piglets compared to the un-medicated control group of pigs. The result of this study reflects the importance of in vivo studies for confirmation of the antimicrobial helper-compound potential of an in vitro active compound.
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- 2019
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47. Nexus vs. Silo Investment Planning Under Uncertainty
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Raphaël Payet-Burin, Mikkel Kromann, Silvio Pereira-Cardenal, Kenneth Marc Strzepek, and Peter Bauer-Gottwein
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water-energy-food nexus ,planning ,infrastructure ,uncertainty ,robust decision making ,hydroeconomic ,Environmental technology. Sanitary engineering ,TD1-1066 - Abstract
Water, energy, and agricultural infrastructure investments have important inter-relations fulfilling potentially competing objectives. When shaping investment plans, decision makers need to evaluate those interactions and the associated uncertainties. We compare planning infrastructure under uncertainty with an integrated water-energy-food nexus framework and with sector-centered (silo) frameworks. We use WHAT-IF, an open-source hydroeconomic decision support tool with a holistic representation of the power and agriculture sectors. The tool is applied to an illustrative synthetic case and to a complex planning problem in the Zambezi River Basin involving reservoirs, hydropower, irrigation, transmission lines and power plant investments. In the synthetic case, the nexus framework selects investments that generate more synergies across sectors. In sector-centered frameworks, the value of investments that impact multiple sectors (like hydropower, bioenergy, and desalinization) are under- or overestimated. Furthermore, the nexus framework identifies risks related to uncertainties that are not linked to the investments respective sectors. In the Zambezi river case, we find that most investments are mainly sensitive to parameters related to their respective sectors, and that financial parameters like discount rate, capital costs or carbon taxes are driving the feasibility of investments. However, trade-offs between water for irrigation and water for hydropower are important; ignoring trade-offs in silo frameworks increases the irrigation expansion that is perceived as beneficial by 22% compared to a nexus framework that considers irrigation and hydropower jointly. Planning in a nexus framework is expected to be particularly important when projects and uncertainties can considerably affect the current equilibrium.
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- 2021
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48. First reported case of Doyne honeycomb retinal dystrophy (Malattia Leventinese/autosomal dominant drusen) in Scandinavia
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Inger Norlyk Sheyanth, Ihab Bishara Lolas, Henrik Okkels, Ligor Pradeep Kiruparajan, Søren Kromann Abildgaard, and Michael Bjørn Petersen
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Doyne honeycomb retinal dystrophy ,EFEMP1 ,Malattia leventinese ,Genetics ,QH426-470 - Abstract
Abstract Background Doyne honeycomb retinal dystrophy (DHRD)/malattia leventinese (ML) is an autosomal dominant, progressive retinal disorder characterized by massive central retinal drusen often partly coalescent forming a characteristic honeycomb‐like pattern. Debut of vision loss often occurs in early to mid‐adulthood, and the degree varies. A single variant in EFEMP1: c.1033C>T (R345W) has been identified as the cause in all cases. Methods Following DNA isolation, exome sequencing was performed in seven genes associated with flecked retina. Direct sequencing was used for variant verification. Results We report the first Scandinavian case of molecular genetically verified DHRD/ML: a 57‐year‐old woman debuting with vision loss and metamorphopsia. On both eyes, ophthalmological findings included massive hard drusen in the macular region and nasal to the optic disc as well as macular hyperpigmentation. Secondary choroidal neovascularizations were identified on both eyes, and anti‐vascular endothelial growth factor was administered, without effect. Conclusion Molecular genetic investigation revealed heterozygosity for the known pathogenic missense variant in EFEMP1: c.1033C>T (R345W) previously reported in relation to DHRD/ML. Family history revealed no other cases of similar visual impairment suggesting a de novo mutation. Furthermore, there was no correlation between the unique DHRD/ML haplotypes reported in the literature and our patient.
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- 2021
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49. A Cross-Country Report on 'The State of Play of Regulated Professions, as Defined by Council Directive 92/51/EEC, in the Candidate Countries of Central and Eastern Europe.' Professional Qualifications.
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Kromann, Winkler
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This document examines the state of regulated professions, as defined by Council of the European Communities Directive 92/51/EEC, in those Central and Eastern European countries that are candidates for admission into the European Union. The introduction discusses Council Directive 92/51/EEC, previous directives, and the national case studies on regulated professions on which this report is based. Chapters 2-4 review the following aspects of the directive's implementation: (1) scope of Council Directive 92/51/EEC (categories of regulated professions and activities in the candidate countries and the directive's scope in relation to other directives); (2) levels of the general system directives (division of professions into levels, bridges between levels, attestation of competence); and (3) ways of implementing the directive (vertical versus horizontal approaches, candidate countries' legislative framework, current regulations on foreigners' access and bilateral agreements). The following aspects of the directive's administration are discussed in chapters 5-8: role of the competent authorities; role of the national coordinator; general trends; and recommendations regarding European Training Foundation contributions to future activities. Appended are a description of the model of implementation of the general system for mutual recognition of qualification papers in Denmark and a discussion of the scope of the second general directive in Denmark. (MN)
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- 1999
50. A Novel Promazine Derivative Shows High in vitro and in vivo Antimicrobial Activity Against Staphylococcus aureus
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Troels Ronco, Nadia S. Jørgensen, Iben Holmer, Sofie Kromann, Ehsan Sheikhsamani, Anders Permin, Søren W. Svenningsen, Jørn B. Christensen, and Rikke H. Olsen
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phenothiazine derivative ,novel antimicrobial compound ,topical agent ,Staphylococcus aureus ,skin infections ,Microbiology ,QR1-502 - Abstract
The emergence of multidrug-resistant bacteria constitutes a significant public health issue worldwide. Consequently, there is an urgent clinical need for novel treatment solutions. It has been shown in vitro that phenothiazines can act as adjuvants to antibiotics whereby the minimum inhibitory concentration (MIC) of the antibiotic is decreased. However, phenothiazines do not perform well in vivo, most likely because they can permeate the blood-brain (BBB) barrier and cause severe side-effects to the central nervous system. Therefore, the aim of this study was to synthesize a promazine derivate that would not cross the BBB but retain its properties as antimicrobial helper compound. Surprisingly, in vitro studies showed that the novel compound, JBC 1847 exhibited highly increased antimicrobial activity against eight Gram-positive pathogens (MIC, 0.5–2 mg/L), whereas a disc diffusion assay indicated that the properties as an adjuvant were lost. JBC 1847 showed significant (P < 0.0001) activity against a Staphylococcus aureus strain compared with the vehicle, in an in vivo wound infection model. However, both in vitro and in silico analyses showed that JBC 1847 possesses strong affinity for human plasma proteins and an Ames test showed that generally, it is a non-mutagenic compound. Finally, in silico predictions suggested that the compound was not prone to pass the BBB and had a suitable permeability to the skin. In conclusion, JBC 1847 is therefore suggested to hold potential as a novel topical agent for the clinical treatment of S. aureus skin and soft tissue infections, but pharmacokinetics and pharmacodynamics need to be further investigated.
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- 2020
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