40 results on '"Linda A. Bradbury"'
Search Results
2. Altered Repertoire Diversity and Disease‐Associated Clonal Expansions Revealed by T Cell Receptor Immunosequencing in Ankylosing Spondylitis Patients
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Linda A. Bradbury, Kim-Anh Lê Cao, Hendrik J. Nel, Tony J. Kenna, Aimee L. Hanson, Julie Phipps, Matthew A. Brown, and Ranjeny Thomas
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Adult ,CD4-Positive T-Lymphocytes ,Male ,0301 basic medicine ,Entropy ,T cell ,Immunology ,Receptors, Antigen, T-Cell ,Adaptive Immunity ,CD8-Positive T-Lymphocytes ,Biology ,medicine.disease_cause ,Autoimmunity ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Rheumatology ,Antigen ,Immunopathology ,medicine ,Humans ,Immunology and Allergy ,Spondylitis, Ankylosing ,HLA-B27 Antigen ,030203 arthritis & rheumatology ,T-cell receptor ,Acquired immune system ,Antigenic Variation ,030104 developmental biology ,medicine.anatomical_structure ,Case-Control Studies ,Leukocytes, Mononuclear ,Female ,CD8 - Abstract
Ankylosing spondylitis (AS) is a common spondyloarthropathy primarily affecting the axial skeleton and strongly associated with HLA-B*27 carriage. Genetic evidence implicates both autoinflammatory processes and autoimmunity against a HLA-B*27-restricted autoantigen in immunopathology. Additional to articular symptoms, up to 70% of AS patients present with concurrent bowel inflammation, suggesting that adverse interactions between a genetically-primed host immune system and the gut microbiome contributes to disease. Accordingly, this study aimed to characterise adaptive immune responses to antigenic stimuli in AS. We profiled the peripheral CD4 and CD8 T-cell receptor (TCR) repertoire of AS patients (n=47) and HLA-B*27 matched controls (n=38). We estimated repertoire diversity and employed univariate and multivariate statistical techniques to characterise AS-associated clonal signatures. We further investigated T-cell proliferation and cytokine production in response to immunogenic antigen exposure in vitro using AS patient (n=19) and control (n=14) peripheral blood mononuclear cells. AS patients showed increased TCR diversity (CD4 P=7.8x10 , CD8 P=9.3x10 ), attributed to a significant reduction in the magnitude of peripheral T-cell expansions globally, and fewer patient T-cells expressed IFNγ (CD8 P=0.03) and TNFα (CD4 P=0.01, CD8 P=0.002) upon in vitro stimulation. Additionally, the CD8 TCR signature was altered, with significantly expanded EBV (P=0.03) and CMV-specific (P=0.02) clonotypes and increased incidence of public CD8 TCRs in HLA-B*27+ AS relative to controls, including homologous clonotypes matching those previously isolated from individuals with bacterial-induced reactive arthritis (ReA). The dynamics of peripheral T-cell responses in AS patients are altered, suggesting that differential antigen exposure and disrupted adaptive immunity are underlying features of disease pathology.
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- 2020
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3. Diffusion-weighted Imaging Is a Sensitive and Specific Magnetic Resonance Sequence in the Diagnosis of Ankylosing Spondylitis
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Kim-Anh Lê Cao, Kelly A. Hollis, Linda A. Bradbury, Benoit Gautier, Philip Robinson, Sateesh Shankaranarayana, Nivene Saad, and Matthew A. Brown
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030203 arthritis & rheumatology ,Ankylosing spondylitis ,medicine.diagnostic_test ,business.industry ,Immunology ,Magnetic resonance imaging ,medicine.disease ,030218 nuclear medicine & medical imaging ,Etanercept ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Erythrocyte sedimentation rate ,medicine ,Adalimumab ,Immunology and Allergy ,Effective diffusion coefficient ,business ,Nuclear medicine ,Spondylitis ,Diffusion MRI ,medicine.drug - Abstract
Objective.We tested the discriminatory capacity of diffusion-weighted magnetic resonance imaging (DWI) and its potential as an objective measure of treatment response to tumor necrosis factor inhibition in ankylosing spondylitis (AS).Methods.Three cohorts were studied prospectively: (1) 18 AS patients with Bath Ankylosing Spondylitis Disease Activity Index > 4, and erythrocyte sedimentation rate > 25 and/or C-reactive protein > 10 meeting the modified New York criteria for AS; (2) 20 cases of nonradiographic axial spondyloarthritis (nr-axSpA) as defined by the Assessment of Spondyloarthritis international Society (ASAS) criteria; and (3) 20 non-AS patients with chronic low back pain, aged between 18 and 45 years, who did not meet the imaging arm of the ASAS criteria for axSpA. Group 1 patients were studied prior to and following adalimumab treatment. Patients were assessed by DWI and conventional magnetic resonance imaging (MRI), and standard nonimaging measures.Results.At baseline, in contrast to standard nonimaging measures, DWI apparent diffusion coefficient (ADC) values showed good discriminatory performance [area under the curve (AUC) > 80% for Group 1 or 2 compared with Group 3]. DWI ADC values were significantly lower posttreatment (0.45 ± 0.433 before, 0.154 ± 0.23 after, p = 0.0017), but had modest discriminating capacity comparing pre– and posttreatment measures (AUC = 68%). This performance was similar to the manual Spondyloarthritis Research Consortium of Canada (SPARCC) scoring system.Conclusion.DWI is informative for diagnosis of AS and nr-axSpA, and has moderate utility in assessment of disease activity or treatment response, with performance similar to that of the SPARCC MRI score.
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- 2018
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4. Genome-wide association study using extreme truncate selection identifies novel genes affecting bone mineral density and fracture risk.
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Emma L Duncan, Patrick Danoy, John P Kemp, Paul J Leo, Eugene McCloskey, Geoffrey C Nicholson, Richard Eastell, Richard L Prince, John A Eisman, Graeme Jones, Philip N Sambrook, Ian R Reid, Elaine M Dennison, John Wark, J Brent Richards, Andre G Uitterlinden, Tim D Spector, Chris Esapa, Roger D Cox, Steve D M Brown, Rajesh V Thakker, Kathryn A Addison, Linda A Bradbury, Jacqueline R Center, Cyrus Cooper, Catherine Cremin, Karol Estrada, Dieter Felsenberg, Claus-C Glüer, Johanna Hadler, Margaret J Henry, Albert Hofman, Mark A Kotowicz, Joanna Makovey, Sing C Nguyen, Tuan V Nguyen, Julie A Pasco, Karena Pryce, David M Reid, Fernando Rivadeneira, Christian Roux, Kari Stefansson, Unnur Styrkarsdottir, Gudmar Thorleifsson, Rumbidzai Tichawangana, David M Evans, and Matthew A Brown
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Genetics ,QH426-470 - Abstract
Osteoporotic fracture is a major cause of morbidity and mortality worldwide. Low bone mineral density (BMD) is a major predisposing factor to fracture and is known to be highly heritable. Site-, gender-, and age-specific genetic effects on BMD are thought to be significant, but have largely not been considered in the design of genome-wide association studies (GWAS) of BMD to date. We report here a GWAS using a novel study design focusing on women of a specific age (postmenopausal women, age 55-85 years), with either extreme high or low hip BMD (age- and gender-adjusted BMD z-scores of +1.5 to +4.0, n = 1055, or -4.0 to -1.5, n = 900), with replication in cohorts of women drawn from the general population (n = 20,898). The study replicates 21 of 26 known BMD-associated genes. Additionally, we report suggestive association of a further six new genetic associations in or around the genes CLCN7, GALNT3, IBSP, LTBP3, RSPO3, and SOX4, with replication in two independent datasets. A novel mouse model with a loss-of-function mutation in GALNT3 is also reported, which has high bone mass, supporting the involvement of this gene in BMD determination. In addition to identifying further genes associated with BMD, this study confirms the efficiency of extreme-truncate selection designs for quantitative trait association studies.
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- 2011
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5. Association of variants at 1q32 and STAT3 with ankylosing spondylitis suggests genetic overlap with Crohn's disease.
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Patrick Danoy, Karena Pryce, Johanna Hadler, Linda A Bradbury, Claire Farrar, Jennifer Pointon, Australo-Anglo-American Spondyloarthritis Consortium, Michael Ward, Michael Weisman, John D Reveille, B Paul Wordsworth, Millicent A Stone, Spondyloarthritis Research Consortium of Canada, Walter P Maksymowych, Proton Rahman, Dafna Gladman, Robert D Inman, and Matthew A Brown
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Genetics ,QH426-470 - Abstract
Ankylosing spondylitis (AS) is a common inflammatory arthritic condition. Overt inflammatory bowel disease (IBD) occurs in about 10% of AS patients, and in addition 70% of AS cases may have subclinical terminal ileitis. Spondyloarthritis is also common in IBD patients. We therefore tested Crohn's disease susceptibility genes for association with AS, aiming to identify pleiotropic genetic associations with both diseases. Genotyping was carried out using Sequenom and Applied Biosystems TaqMan and OpenArray technologies on 53 markers selected from 30 Crohn's disease associated genomic regions. We tested genotypes in a population of unrelated individual cases (n = 2,773) and controls (n = 2,215) of white European ancestry for association with AS. Statistical analysis was carried out using a Cochran-Armitage test for trend in PLINK. Strong association was detected at chr1q32 near KIF21B (rs11584383, P = 1.6 × 10(-10), odds ratio (OR) = 0.74, 95% CI:0.68-0.82). Association with disease was also detected for 2 variants within STAT3 (rs6503695, P = 4.6 × 10(-4). OR = 0.86 (95% CI:0.79-0.93); rs744166, P = 2.6 × 10(-5), OR = 0.84 (95% CI:0.77-0.91)). Association was confirmed for IL23R (rs11465804, P = 1.2 × 10(-5), OR = 0.65 (95% CI:0.54-0.79)), and further associations were detected for IL12B (rs10045431, P = 5.2 × 10(-5), OR = 0.83 (95% CI:0.76-0.91)), CDKAL1 (rs6908425, P = 1.1 × 10(-4), OR = 0.82 (95% CI:0.74-0.91)), LRRK2/MUC19 (rs11175593, P = 9.9 × 10(-5), OR = 1.92 (95% CI: 1.38-2.67)), and chr13q14 (rs3764147, P = 5.9 × 10(-4), OR = 1.19 (95% CI: 1.08-1.31)). Excluding cases with clinical IBD did not significantly affect these findings. This study identifies chr1q32 and STAT3 as ankylosing spondylitis susceptibility loci. It also further confirms association for IL23R and detects suggestive association with another 4 loci. STAT3 is a key signaling molecule within the Th17 lymphocyte differentiation pathway and further enhances the case for a major role of this T-lymphocyte subset in ankylosing spondylitis. Finally these findings suggest common aetiopathogenic pathways for AS and Crohn's disease and further highlight the involvement of common risk variants across multiple diseases.
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- 2010
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6. THU0464 A genome-wide association study of gout in people of european ancestry
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Matthijs Janssen, Alexander So, Marilyn E. Merriman, Edward Roddy, Lisa K. Stamp, Philip Riches, Ruth Topless, Robert J. Walker, Twj Huizinga, Tony R. Merriman, Lab Joosten, Mariano Andrés, Murray Cadzow, J. de Zoysa, Matthew A. Brown, Geraldine M. McCarthy, Karel Pavelka, Christopher Hill, Fernando Perez-Ruiz, E. de Guzman, Donia Macartney-Coxson, Blanka Stiburkova, Nicola Dalbeth, Ken Yamamoto, Rosa J. Torres, Amanda Phipps-Green, T.L. Jansen, T R D J Radstake, Katie Cremin, Fina A S Kurreeman, S. Lester, Rinki Murphy, R. Stubbs, Linda A. Bradbury, Michael Doherty, E Stahl, Russell R C Buchanan, Abhishek Abhishek, A.-K. Tausche, Hirotaka Matsuo, Sally P.A. McCormick, Hyon K. Choi, Tanya J Flynn, Frédéric Lioté, Maureen Rischmueller, Juan G. Puig, and Malcolm D. Smith
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musculoskeletal diseases ,030203 arthritis & rheumatology ,0301 basic medicine ,medicine.medical_specialty ,business.industry ,nutritional and metabolic diseases ,Genome-wide association study ,Single-nucleotide polymorphism ,Acr criteria ,medicine.disease ,Biobank ,Rheumatology ,Gout ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Internal medicine ,Genotype ,medicine ,Hyperuricemia ,business - Abstract
Background Gout progresses through three stages: hyperuricemia, deposition of monosodium urate (MSU) crystals, and innate immune system response to MSU crystals. Genome wide association studies (GWAS) have provided insight into the molecular control of progression to hyperuricemia. However, less is known about the progression from hyperuricemia to gout. Objectives To conduct a GWAS for gout (where an immune response to MSU crystals has occurred) using 5,835 cases - the largest GWAS of gout to date. Methods The GWAS comprised 3 data sets: NZ/Eurogout (2,365 clinically-ascertained cases; 1,485 controls), the Health Professionals Follow-Up (HPFS) and Nurses9 Health Studies (NHS) (1,038 cases, self-ascertained using ACR criteria; 1,095 controls), and UK Biobank (2,432 cases, ascertained by self-report of gout, hospital records, and/or use of urate-lowering therapy; 102,989 controls). The NZ/Eurogout samples were genotyped using the Illumina CoreExome v24 bead chip array (547,644 markers), the HPFS/NHS samples using the Illumina OmniExpress v12 bead chip array (730,525 markers), and the UK Biobank samples using an Affymetrix Axiom array (820,967 markers). UK Biobank genotypes had been imputed to ∼73.3M SNPs. Neither the NZ/Eurogout nor NHS/HPFS genotype sets were imputed. Markers common to all three data sets (279,939) were associated with gout (adjusted for sex, age) within each data set separately using PLINK 1.9. An inverse-variance weighted meta-analysis was done with meta v4.4 in R. Results There were seven loci with genome-wide significant (P Conclusions All seven loci have been previously associated with serum urate levels in GWAS. Our data emphasise the relative importance of genetic control of serum urate, compared to the genetic control of MSU crystal formation or the innate immune response, in determining gout. Disclosure of Interest None declared
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- 2017
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7. Transcriptome analysis of ankylosing spondylitis patients before and after TNF-α inhibitor therapy reveals the pathways affected
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Jonathan Ellis, X B Wang, Zhixiu Li, David J. Pennisi, K Hollis, Tony J. Kenna, Linda A. Bradbury, Matthew A. Brown, Xiaoxia Song, and Jyotsna Batra
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0301 basic medicine ,Adult ,Male ,Immunology ,Inflammation ,Biology ,Receptors, Interleukin-8B ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Genetics ,medicine ,Humans ,Spondylitis, Ankylosing ,KEGG ,Receptor, Notch1 ,Receptor ,Genetics (clinical) ,030203 arthritis & rheumatology ,Tumor Necrosis Factor-alpha ,Gene Expression Profiling ,Middle Aged ,Receptors, Interleukin-6 ,Interleukin-10 ,Gene expression profiling ,Interleukin 10 ,030104 developmental biology ,Receptors, Tumor Necrosis Factor, Type I ,Tumor necrosis factor alpha ,Female ,medicine.symptom - Abstract
Tumor necrosis factor-α (TNF-α) inhibitors are highly effective in suppressing inflammation in ankylosing spondylitis (AS) patients, and operate by suppression of TFN-α and downstream immunological pathways. To determine the mechanisms of action of TNF-α inhibitors in AS patients, we used transcriptomic and bioinformatic approaches on peripheral blood mononuclear cells from AS patients pre and post treatment. We found 656 differentially expressed genes, including the genome-wide significant AS-associated genes, IL6R, NOTCH1, IL10, CXCR2 and TNFRSF1A. A distinctive gene expression profile was found between male and female patients, mainly because of sex chromosome-linked genes and interleukin 17 receptor C, potentially accounting for the differences in clinical manifestation and treatment response between the genders. In addition to immune and inflammation regulatory pathways, like intestinal immune network for IgA production, cytokine-cytokine receptor interaction, Ras signaling pathway, allograft rejection and hematopoietic cell lineage, KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway analyses revealed that infection-associated pathways (influenza A and toxoplasmosis) and metabolism-associated pathways were involved in response to TNF-α inhibitor treatment, providing insight into the mechanism of TNF-α inhibitors.
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- 2017
8. Genetic Dissection of Acute Anterior Uveitis Reveals Similarities and Differences in Associations Observed With Ankylosing Spondylitis
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B. Paul Wordsworth, Philip Robinson, Mariapia A. Degli-Esposti, Nigil Haroon, Denis Wakefield, J J Pointon, Irene E. van der Horst-Bruinsma, Jessica Harris, Linda A. Bradbury, Lyndell L Lim, Matthew A. Brown, Proton Rahman, Alex W. Hewitt, David M. Evans, Lianne S. Gensler, Peter McCluskey, Walter P. Maksymowych, Peter Fleming, Jamie E Craig, Katie Cremin, Pamela Mukhopadhyay, Adrian Cortes, Michael H. Weisman, Joseph E. Powell, Robert D. Inman, John D. Reveille, Tammy M. Martin, Valentina Voigt, James T. Rosenbaum, Theodora A. M. Claushuis, and Paul Leo
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Ankylosing spondylitis ,education.field_of_study ,HLA-B27 ,Pathology ,medicine.medical_specialty ,business.industry ,Immunology ,Population ,Genome-wide association study ,Locus (genetics) ,medicine.disease ,Rheumatology ,medicine ,Genetic predisposition ,Immunology and Allergy ,education ,business ,Genotyping ,Genetic association - Abstract
Free to read Objective To use high-density genotyping to investigate the genetic associations of acute anterior uveitis (AAU) in patients with and those without ankylosing spondylitis (AS). Methods We genotyped samples from 1,711 patients with AAU (either primary or combined with AS), 2,339 AS patients without AAU, and 10,000 control subjects on an Illumina Immunochip Infinium microarray. We also used data for AS patients from previous genome-wide association studies to investigate the AS risk locus ANTXR2 for its putative effect in AAU. ANTXR2 expression in mouse eyes was investigated by real-time quantitative reverse transcription–polymerase chain reaction. Results A comparison between all patients with AAU and healthy control subjects showed strong association over HLA–B, corresponding to the HLA–B27 tag single-nucleotide polymorphism rs116488202. The association of 3 non–major histocompatibility complex loci, IL23R, the intergenic region 2p15, and ERAP1, reached genome-wide significance (P < 5 × 10−8). Five loci harboring the immune-related genes IL10–IL19, IL18R1–IL1R1, IL6R, the chromosome 1q32 locus harboring KIF21B, as well as the eye-related gene EYS, were also associated, reaching a suggestive level of significance (P < 5 × 10−6). Several previously confirmed AS associations demonstrated significant differences in effect size between AS patients with AAU and AS patients without AAU. ANTXR2 expression varied across eye compartments. Conclusion These findings of both novel AAU-specific associations and associations shared with AS demonstrate overlapping but also distinct genetic susceptibility loci for AAU and AS. The associations in IL10 and IL18R1 are shared with inflammatory bowel disease, suggesting common etiologic pathways.
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- 2014
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9. Disease-associated polymorphisms in ERAP1 do not alter endoplasmic reticulum stress in patients with ankylosing spondylitis
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Max C. Lau, P-L. Low, Tony J. Kenna, Nitish Agrawal, Francesco Ciccia, Riccardo Alessandro, Patricia Keith, Mary-Ellen Costello, Matthew A. Brown, Giovanni Triolo, Gethin P. Thomas, Philip Robinson, Linda A. Bradbury, Kennatj, Lau, Mc, Keith, P, Ciccia, F, Costello, Me, Bradbury, L, Low, Pl, Agrawal, N, Triolo, G, Alessandro, R, Robinson, Pc, Thomas, Gp, Brown, Ma, Kenna,TJ, Lau, MC, Costello, ME, Low, PL, Robinson, PC, Thomas, GP, and Brown, MA
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Adult ,Male ,Ankylosing Spondylitis ,medicine.medical_treatment ,Immunology ,Inflammation ,Single-nucleotide polymorphism ,Disease ,Biology ,ERAP1 ,Aminopeptidases ,Polymorphism, Single Nucleotide ,Minor Histocompatibility Antigens ,Young Adult ,Gene expression ,Genetics ,medicine ,Humans ,Spondylitis, Ankylosing ,ERAP1, Ankylosing Spondylitis ,Endoplasmic Reticulum Chaperone BiP ,Spondylitis ,HLA-B27 Antigen ,Genetics (clinical) ,Ankylosing spondylitis ,Endoplasmic reticulum ,Middle Aged ,Endoplasmic Reticulum Stress ,medicine.disease ,Cytokine ,Female ,medicine.symptom - Abstract
The mechanism by which human leukocyte antigen B27 (HLA-B27) contributes to ankylosing spondylitis (AS) remains unclear. Genetic studies demonstrate that association with and interaction between polymorphisms of endoplasmic reticulum aminopeptidase 1 (ERAP1) and HLA-B27 influence the risk of AS. It has been hypothesised that ERAP1-mediated HLA-B27 misfolding increases endoplasmic reticulum (ER) stress, driving an interleukin (IL) 23-dependent, pro-inflammatory immune response. We tested the hypothesis that AS-risk ERAP1 variants increase ER-stress and concomitant pro-inflammatory cytokine production in HLA-B27(+) but not HLA-B27(-) AS patients or controls. Forty-nine AS cases and 22 healthy controls were grouped according to HLA-B27 status and AS-associated ERAP1 rs30187 genotypes: HLA-B27(+)ERAP1(risk), HLA-B27(+)ERAP1(protective), HLA-B27(-)ERAP1(risk) and HLA-B27(-)ERAP1(protective). Expression levels of ER-stress markers GRP78 (8 kDa glucose-regulated protein), CHOP (C/EBP-homologous protein) and inflammatory cytokines were determined in peripheral blood mononuclear cell and ileal biopsies. We found no differences in ER-stress gene expression between HLA-B27(+) and HLA-B27(-) cases or healthy controls, or between cases or controls stratified by carriage of ERAP1 risk or protective alleles in the presence or absence of HLA-B27. No differences were observed between expression of IL17A or TNF (tumour necrosis factor) in HLA-B27(+)ERAP1(risk), HLA-B27(+)ERAP1(protective) and HLA-B27(-)ERAP1(protective) cases. These data demonstrate that aberrant ERAP1 activity and HLA-B27 carriage does not alter ER-stress levels in AS, suggesting that ERAP1 and HLA-B27 may influence disease susceptibility through other mechanisms.
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- 2014
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10. New approaches in ankylosing spondylitis
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Linda A. Bradbury and Matthew A. Brown
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medicine.medical_specialty ,Diagnostic methods ,Disease ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,Patient Education as Topic ,Bony ankylosis ,medicine ,Humans ,Spondylitis, Ankylosing ,030212 general & internal medicine ,Intensive care medicine ,Spondylitis ,Glucocorticoids ,030203 arthritis & rheumatology ,Ankylosing spondylitis ,business.industry ,Anti-Inflammatory Agents, Non-Steroidal ,Treatment options ,Exercise therapy ,General Medicine ,medicine.disease ,Exercise Therapy ,Antirheumatic Agents ,business - Abstract
Free to read on journal website (may need to create free account first) There have been marked improvements in treatment options but none have yet been shown to induce remission The past decade has seen major advances in the diagnosis and management of ankylosing spondylitis (AS) and in research into its pathogenesis. It remains the case that no current treatments have been shown to lead to disease remissions or to halt the progression of the bony ankylosis that causes the major morbidity associated with this condition. Nonetheless, improved diagnostic methods and management have led to major benefits for patients, with marked improvements in quality of life with reduced treatment-associated side effects.
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- 2016
11. Non-B27 MHC associations of ankylosing spondylitis
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Matthew A. Brown, M. Barnardo, Linda A. Bradbury, B P Wordsworth, Andrei Calin, I. Herzberg, Am-M. Sims, and C. Darke
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Genotype ,Immunology ,Human leukocyte antigen ,Biology ,Major histocompatibility complex ,Polymerase Chain Reaction ,Major Histocompatibility Complex ,Genetics ,medicine ,Genetic predisposition ,Humans ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,Spondylitis ,Genetics (clinical) ,DNA Primers ,Ankylosing spondylitis ,Haplotype ,medicine.disease ,HLA-B ,Histocompatibility ,England ,Haplotypes ,Case-Control Studies ,biology.protein ,Chromosomes, Human, Pair 6 - Abstract
Ankylosing spondylitis (AS) has been associated with human leukocyte antigen (HLA)-B27 for over 30 years; however, the mechanism of action has remained elusive. Although many studies have reported associations between AS and other genes in the major histocompatibility complex (MHC) in AS, no conclusive results have emerged. To investigate the contribution of non-B27 MHC genes to AS, a large cohort of AS families and controls were B27 typed and genotyped across the region. Interrogation of the data identified a region of 270 kb, lying from 31 952 649 to 32 221 738 base pairs from the p-telomere of chromosome 6 and containing 23 genes, which is likely to include genes involved with susceptibility to AS.
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- 2016
12. The interleukin 1 gene cluster contains a major susceptibility locus for ankylosing spondylitis
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B. Paul Wordsworth, Gordon W. Duff, Andrei Calin, Owen Beynon, Aaron Abbott, Anne Marie Sims, A. M. Crane, Linda A. Bradbury, Ibi Herzberg, Heather J. Cordell, Andrew E. Timms, Lon R. Cardon, Matthew A. Brown, and Mark R.E. Coyne
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Genotype ,DNA Mutational Analysis ,Inheritance Patterns ,Single-nucleotide polymorphism ,Human leukocyte antigen ,Biology ,Polymorphism, Single Nucleotide ,Gene Frequency ,Gene cluster ,Genetics ,medicine ,Humans ,Genetics(clinical) ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,Spondylitis ,HLA-B27 Antigen ,Genetics (clinical) ,DNA Primers ,Electrophoresis, Agar Gel ,Ankylosing spondylitis ,Haplotype ,Interleukin ,Articles ,medicine.disease ,Major gene ,United Kingdom ,Haplotypes ,Chromosomes, Human, Pair 2 ,Immunology ,Interleukin-1 - Abstract
Ankylosing spondylitis (AS) is a common and highly heritable inflammatory arthropathy. Although the gene HLA-B27 is almost essential for the inheritance of the condition, it alone is not sufficient to explain the pattern of familial recurrence of the disease. We have previously demonstrated suggestive linkage of AS to chromosome 2q13, a region containing the interleukin 1 (IL-1) family gene cluster, which includes several strong candidates for involvement in the disease. In the current study, we describe strong association and transmission of IL-1 family gene cluster single-nucleotide polymorphisms and haplotypes with AS.
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- 2016
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13. Risedronate in adults with osteogenesis imperfecta type I: increased bone mineral density and decreased bone turnover, but high fracture rate persists
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S Barlow, Emma L. Duncan, F. Geoghegan, Linda A. Bradbury, Rosemary A. Hannon, Stephen Stuckey, John Wass, Matthew A. Brown, and Roslin Russell
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Adult ,Male ,musculoskeletal diseases ,medicine.medical_specialty ,Adolescent ,Bone density ,Endocrinology, Diabetes and Metabolism ,Bone remodeling ,Fractures, Bone ,Young Adult ,Bone Density ,Internal medicine ,Humans ,Medicine ,Bone pain ,Aged ,Bone mineral ,Lumbar Vertebrae ,Bone Density Conservation Agents ,business.industry ,Etidronic Acid ,Middle Aged ,Osteogenesis Imperfecta ,Etidronic acid ,medicine.disease ,Surgery ,Treatment Outcome ,Osteogenesis imperfecta ,Risedronic acid ,Female ,Hip Joint ,Bone Remodeling ,medicine.symptom ,business ,Risedronic Acid ,Biomarkers ,Follow-Up Studies ,medicine.drug - Abstract
UNLABELLED: Bisphosphonates can increase bone mineral density (BMD) in children with osteogenesis imperfecta (OI). In this study of adults with OI type I, risedronate increased BMD at lumbar spine (but not total hip) and decreased bone turnover. However, the fracture rate in these patients remained high. INTRODUCTION: Intravenous bisphosphonates given to children with OI can increase BMD and reduce fracture incidence. Oral and/or intravenous bisphosphonates may have similar effects in adults with OI. We completed an observational study of the effect of risedronate in adults with OI type I. METHODS: Thirty-two adults (mean age, 39 years) with OI type I were treated with risedronate (total dose, 35 mg weekly) for 24 months. Primary outcome measures were BMD changes at lumbar spine (LS) and total hip (TH). Secondary outcome measures were fracture incidence, bone pain, and change in bone turnover markers (serum procollagen type I aminopropeptide (P1NP) and bone ALP). A meta-analysis of published studies of oral bisphosphonates in adults and children with OI was performed. RESULTS: Twenty-seven participants (ten males and seventeen females) completed the study. BMD increased at LS by 3.9% (0.815 vs. 0.846 g/cm(2), p = 0.007; mean Z-score, -1.93 vs. -1.58, p = 0.002), with no significant change at TH. P1NP fell by 37% (p = 0.00041), with no significant change in bone ALP (p = 0.15). Bone pain did not change significantly (p = 0.6). Fracture incidence remained high, with 25 clinical fractures and 10 major fractures in fourteen participants (0.18 major fractures per person per year), with historical data of 0.12 fractures per person per year. The meta-analysis did not demonstrate a significant difference in fracture incidence in patients with OI treated with oral bisphosphonates. CONCLUSIONS: Risedronate in adults with OI type I results in modest but significant increases in BMD at LS, and decreased bone turnover. However, this may be insufficient to make a clinically significant difference to fracture incidence.
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- 2016
14. The effect of transforming growth factor beta1 gene polymorphisms in ankylosing spondylitis
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Am-M. Sims, I. Herzberg, Matthew A. Brown, B P Wordsworth, Markku J Kauppi, J. Tuomilehto, E. Jaakkola, K. Kaarela, K. Laiho, Sinead Brophy, Andrei Calin, A. M. Crane, and Linda A. Bradbury
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Adult ,Male ,Linkage disequilibrium ,Population ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,Rheumatology ,Transforming Growth Factor beta ,Humans ,Pharmacology (medical) ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,education ,BASDAI ,Finland ,HLA-B27 Antigen ,Genetic association ,Genetics ,education.field_of_study ,Chi-Square Distribution ,Polymorphism, Genetic ,Haplotype ,England ,Haplotypes ,Female ,Age of onset ,BASFI ,Microsatellite Repeats - Abstract
Objectives. To determine whether genetic polymorphisms in or near the transforming growth factor beta1 (TGFB1) locus were associated with susceptibility to or severity of ankylosing spondylitis (AS). Methods. Five intragenic single-nucleotide polymorphisms (SNP) and three microsatellite markers flanking the TGFB1 locus were genotyped. Seven hundred and sixty-two individuals from 184 multiplex families were genotyped for the microsatellite markers and two of the promoter SNPs. One thousand and two individuals from 212 English and 170 Finnish families with AS were genotyped for all five intragenic SNPs. A structured questionnaire was used to assess the age of symptom onset, disease duration and disease severity scores, including the BASDAI (Bath Ankylosing Spondylitis Disease Activity Index) and BASFI (Bath Ankylosing Spondylitis Functional Index). Results. A weak association was noted between the rare TGFB1 +1632 T allele and AS in the Finnish population (P = 0.04) and in the combined data set (P = 0.03). No association was noted between any other SNPs or SNP haplotype and AS, even among those families with positive non-parametric linkage scores. The TGFB1 +1632 polymorphism was also associated with a younger age of symptom onset (English population, allele 2 associated with age of onset greater by 4.2 yr, P = 0.05; combined data set, allele 2 associated with age of onset greater by 3.2 yr, P = 0.02). A haplotype of coding region SNPs (TGFB1 +869/+915+1632 alleles 2/1/2) was associated with age of symptom onset in both the English parent-case trios and the combined data set (English data set, haplotype 2/1/2 associated with age of onset greater by 4.9 yr, P = 0.03; combined data set, haplotype 2/1/2 associated with greater age of onset by 4.2 yr, P = 0.006). Weak linkage with AS susceptibility was noted and the peak LOD score was 1.3 at distance 2 cM centromeric to the TGFB1 gene. No other linkage or association was found between quantitative traits and the markers. Conclusion. This study suggests that the polymorphisms within the TGFB1 gene play at most a small role in AS and that other genes encoded on chromosome 19 are involved in susceptibility to the disease.
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- 2016
15. PTPN22 R620W minor allele is a genetic risk factor for giant cell arteritis
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Bain Shenstone, Carlee Ruediger, Linda A. Bradbury, Matthew A. Brown, Tony R. Merriman, Elisabeth De Smit, Malcolm D. Smith, Geoffrey O. Littlejohn, Maureen Rischmueller, Rachel J. Black, Michael D. Wiese, Susan C. Lester, Graeme Jones, Christopher Hill, Andrew A. Harrison, Alex W. Hewitt, Lester, Susan, Hewitt, Alex W, Ruediger, Carlee D, Bradbury, Linda, De Smit, Elisabeth, Wiese, Michael D, Black, Rachel, Harrison, Andrew, Jones, Graeme, Littlejohn, Geoffrey O, Merriman, Tony R, Shenstone, Bain, Smith, Malcolm D, Rischmueller, Maureen, Brown, Matthew A, and Hill, Catherine L
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Vasculitis ,Immunology ,Giant Cell Arteritis ,Single-nucleotide polymorphism ,Biology ,vasculitis ,PTPN22 ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Gene Polymorphism ,immune system diseases ,medicine ,genetic risk factors ,Systemic vasculitis ,Immunology and Allergy ,030212 general & internal medicine ,skin and connective tissue diseases ,Gene ,030203 arthritis & rheumatology ,Genetics ,medicine.disease ,3. Good health ,Minor allele frequency ,Giant cell arteritis ,giant cell arteritis (GCA) ,Gene polymorphism - Abstract
Giant cell arteritis (GCA) is one of the commonest forms of vasculitis in the elderly, and may result in blindness and stroke. The pathogenesis of GCA is not understood, although environmental, infectious and genetic risk factors are implicated. One gene of interest is PTPN22, encoding lymphoid protein tyrosine phosphatase (Lyp), expressed exclusively in immune cells, which is proposed to be an 'archetypal non-HLA autoimmunity gene'. The minor allele of a functional PTPN22 single nucleotide polymorphism (rs2476601, R620W), which disrupts an interaction motif in the protein, was originally reported to be associated with biopsy-proven GCA in Spanish patients, with supporting data from three replicate Northern European studies. Recently, this observation was extended with additional patients and controls, and studies encompassing European, Scandinavian, UK and American patients. The aim of our study was to determine the association between PTPN22 rs2476601 (R620W) and biopsy-proven GCA in an Australian case cohort. Refereed/Peer-reviewed
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- 2016
16. Exome-wide study of ankylosing spondylitis demonstrates additional shared genetic background with inflammatory bowel disease
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Andrew A. Harrison, Paul Wordsworth, Katie Cremin, Simon Stebbings, Philip Robinson, Jessica Harris, Linda A. Bradbury, Emma L. Duncan, Paul Leo, J J Pointon, Matthew A. Brown, David M. Evans, and Dna, Genotyping, Data Qc
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030203 arthritis & rheumatology ,0301 basic medicine ,Ankylosing spondylitis ,business.industry ,Genome-wide association study ,Disease ,Human leukocyte antigen ,medicine.disease ,Inflammatory bowel disease ,Article ,3. Good health ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Arthropathy ,Immunology ,Genetics ,medicine ,business ,Molecular Biology ,CDKAL1 ,Exome ,Genetics (clinical) - Abstract
Ankylosing spondylitis (AS) is a common chronic immune-mediated arthropathy affecting primarily the spine and pelvis. The condition is strongly associated with HLA-B*27 as well as other human leukocyte antigen variants and at least 47 individual non-MHC-associated variants. However, substantial additional heritability remains as yet unexplained. To identify further genetic variants associated with the disease, we undertook an association study of AS in 5,040 patients and 21,133 healthy controls using the Illumina Exomechip microarray. A novel association achieving genome-wide significance was noted at CDKAL1. Suggestive associations were demonstrated with common variants in FAM118A, C7orf72 and FAM114A1 and with a low-frequency variant in PNPLA1. Two of the variants have been previously associated with inflammatory bowel disease (IBD; CDKAL1 and C7orf72). These findings further increase the evidence for the marked similarity of genetic risk factors for IBD and AS, consistent with the two diseases having similar aetiopathogenesis.
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- 2016
17. Enrichment of circulating interleukin-17-secreting interleukin-23 receptor-positive γ/δ T cells in patients with active ankylosing spondylitis
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Janelle McFarlane, Ran Duan, Tony J. Kenna, Ranjeny Thomas, Shayna E. A. Street, Linda A. Bradbury, Matthew A. Brown, Malcolm D. Smith, Helen Weedon, Gethin P. Thomas, and Stuart I. Davidson
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Adult ,CD4-Positive T-Lymphocytes ,Male ,T cell ,Immunology ,CD8-Positive T-Lymphocytes ,medicine.disease_cause ,Autoimmunity ,Arthritis, Rheumatoid ,Young Adult ,Interleukin 21 ,Rheumatology ,Antigen ,medicine ,Humans ,Immunology and Allergy ,Spondylitis, Ankylosing ,Pharmacology (medical) ,Cells, Cultured ,Aged ,business.industry ,Arthritis, Psoriatic ,Interleukin-17 ,Interleukin ,CD28 ,Receptors, Antigen, T-Cell, gamma-delta ,Receptors, Interleukin ,Middle Aged ,Molecular biology ,medicine.anatomical_structure ,Leukocytes, Mononuclear ,Cytokines ,Female ,Interleukin 17 ,business ,CD8 ,Signal Transduction - Abstract
Objective Ankylosing spondylitis (AS) is a common inflammatory arthritis affecting primarily the axial skeleton. IL23R is genetically associated with AS. This study was undertaken to investigate and characterize the role of interleukin-23 (IL-23) signaling in AS pathogenesis. Methods The study population consisted of patients with active AS (n = 17), patients with psoriatic arthritis (n = 8), patients with rheumatoid arthritis, (n = 9), and healthy subjects (n = 20). IL-23 receptor (IL-23R) expression in T cells was determined in each subject group, and expression levels were compared. Results The proportion of IL-23R–expressing T cells in the periphery was 2-fold higher in AS patients than in healthy controls, specifically driven by a 3-fold increase in IL-23R–positive γ/δ T cells in AS patients. The proportions of CD4+ and CD8+ cells that were positive for IL-17 were unchanged. This increased IL-23R expression on γ/δ T cells was also associated with enhanced IL-17 secretion, with no observable IL-17 production from IL-23R–negative γ/δ T cells in AS patients. Furthermore, γ/δ T cells from AS patients were heavily skewed toward IL-17 production in response to stimulation with IL-23 and/or anti-CD3/CD28. Conclusion Recently, mouse models have shown IL-17–secreting γ/δ T cells to be pathogenic in infection and autoimmunity. Our data provide the first description of a potentially pathogenic role of these cells in a human autoimmune disease. Since IL-23 is a maturation and growth factor for IL-17–producing cells, increased IL-23R expression may regulate the function of this putative pathogenic γ/δ T cell population.
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- 2012
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18. ARA Oral Abstracts
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Stuart I. Davidson, G Thomas, Tony J. Kenna, R Thomas, R Duan, Matthew A. Brown, J Mcfarlane, Shayna E. A. Street, and Linda A. Bradbury
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education.field_of_study ,Immunology ,Population ,Internal Medicine ,Interleukin 17 ,Biology ,education - Published
- 2011
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19. Gene expression profiling reveals a downregulation in immune-associated genes in patients with AS
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Gethin P. Thomas, Linda A. Bradbury, Ran Duan, Paul Leo, and Matthew A. Brown
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Adult ,Male ,Candidate gene ,Adolescent ,Microarray ,Immunology ,Down-Regulation ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Rheumatology ,Gene expression ,Cluster Analysis ,Humans ,Immunology and Allergy ,Spondylitis, Ankylosing ,Gene ,Aged ,Oligonucleotide Array Sequence Analysis ,Reverse Transcriptase Polymerase Chain Reaction ,Microarray analysis techniques ,Gene Expression Profiling ,Blood Proteins ,Middle Aged ,Phenotype ,Molecular biology ,Gene expression profiling ,Reverse transcription polymerase chain reaction ,Case-Control Studies ,Leukocytes, Mononuclear ,Female - Abstract
Objective To identify differentially expressed genes in peripheral blood mononuclear cells (PBMCs) from patients with ankylosing spondylitis (AS) compared with healthy individuals. Methods RNA was extracted from PBMCs collected from 18 patients with active disease and 18 gender-matched and age-matched controls. Expression profiles of these cells were determined using microarray. Candidate genes with differential expressions were confirmed in the same samples using quantitative reverse transcription-PCR (qRT-PCR). These genes were then validated in a different sample cohort of 35 patients with AS and 18 controls by qRT-PCR. Results Microarray analysis identified 452 genes detected with 485 probes which were differentially expressed between patients with AS and controls. Underexpression of NR4A2, tumour necrosis factor AIP3 (TNFAIP3) and CD69 was confirmed. These genes were further validated in a different sample group in which the patients with AS had a wider range of disease activity. Predictive algorithms were also developed from the expression data using receiver-operating characteristic curves, which demonstrated that the three candidate genes have ~80% power to predict AS according to their expression levels. Conclusions The findings show differences in global gene expression patterns between patients with AS and controls, suggesting an immunosuppressive phenotype in the patients. Furthermore, downregulated expression of three immune-related genes was confirmed. These candidate genes were also shown to be strong predictive markers for AS.
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- 2009
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20. Genome-wide association study identifies eight loci associated with blood pressure
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Peter Holmans, Udo Seedorf, Beverley M. Shields, Peter McGruffin, Arne Pfeufer, Steve Eyre, Nathalie J. Prescott, Michael Boehnke, Valentina Moskovina, Abiodun Onipinla, Leena Peltonen, Nadira Yuldasheva, Peter M. Nilsson, Valeria Romanazzi, Vincent Mooser, Göran Berglund, Alistair S. Hall, Dominic P. Kwiatkowski, Barry Widmer, Benjamin F. Voight, Stefania Bandinelli, Mark M. Iles, Sven Bergmann, Thomas Meitinger, James P. Boorman, Simonetta Guarrera, Nazneen Rahman, Murielle Bochud, Graham A. Hitman, Emma Keniry, Nelson B. Freimer, Richard Dobson, Francis S. Collins, Gerjan Navis, Jennifer L. Pointon, Richard N. Bergman, Ruth J. F. Loos, Roberto Lorbeer, Carolina A. Braga Marcano, Christian Gieger, Florian Ernst, Xin Yuan, Catherine Potter, Hazel E. Drummond, Allan H. Young, George Kirov, John F. Peden, Helen Stevens, David Clayton, Mattijs E. Numans, Katherine Gordon-Smith, Anne Farmer, Alastair Forbes, M. Khalid Mohiuddin, John A. Todd, Christopher G. Mathew, David A. Collier, Mark I. McCarthy, Francesca Bredin, Clive M. Onnie, Dan Davidson, Markus Perola, Pamela Whittaker, Yvonne T. van der Schouw, Rathi Ravindrarajan, I. C.A. Spencer, Teresa Ferreira, Nilesh J. Samani, Serge Hercberg, Gonçalo R. Abecasis, Christopher J. Groves, Nicholas John Craddock, Angela Döring, Edward G. Lakatta, Muminatou Jallow, Wendy L. McArdle, David Bentley, Susana Eyheramendy, Uwe Völker, Christopher Newton-Cheh, Jaspal S. Kooner, Hugh Watkins, Gavin Lucas, H. T. Leung, Marjo Ritta Jarvelin, Johanna Kuusisto, Wiek H. van Gilst, Wendy Thomson, Lou R. Cardon, Harold Snieder, Marju Orho-Melander, Patricia B. Munroe, Toshiko Tanaka, Jeffrey C. Barrett, Azhar Maqbool, Henry Völzke, John M. C. Connell, Elaine R. Nimmo, John R. B. Perry, Michael R. Stratton, Ralph McGinnis, Pekka Jousilahti, Michiel L. Bots, Ian Jones, Elizabeth Meech, Matthew A. Brown, Johannie Gungadoo, Jian'an Luan, Jilur Ghori, Richard J. Dixon, N. Charlotte Onland-Moret, Fulvio Ricceri, Anthony J. Balmforth, Catherine E. Todhunter, Inês Barroso, Sheila Bingham, Timo T. Valle, Fredrik O. Vannberg, Diana Zelenika, Stephen Sawcer, Anneli Pouta, David M. Evans, Cuno S. P. M. Uiterwaal, Pilar Galan, Georg Homuth, Hannah Donovan, David J. Conway, Paul Elliott, Alessandra Allione, Paul E. de Jong, Miles Parkes, Amy Chaney, John C. Chambers, Toby Johnson, Isaac Subirana, Vesela Gateva, Cathryn M. Lewis, Christopher J. O'Donnell, Hana Lango, David Schlessinger, Mark J. Caulfield, Thorsten Reffelmann, Jamie Barbour, Karen L. Mohlke, Sarah E. Hunt, Thilo Winzer, Frances M K Williams, Christopher Mathew, I. Wallace, Anuj Goel, Jaakko Tuomilehto, Louise V. Wain, Gabriel Crawford, Samantha L. Hider, Detelinea Grozeva, Elaine K. Green, Paul D. Gilbert, Peter S. Braund, Jaume Marrugat, Rainer Rettig, Pim van der Harst, Yik Ying Teo, Andrew P. Morris, Guiseppe Matullo, Serena Sanna, Cristen J. Willer, Suzannah Bumpstead, Niall C. Taylor, Jacques S. Beckmann, Pierre Meneton, Elin Org, Luigi Ferrucci, Doug Easton, Sheila Seal, Joanne M. Heward, Anne U. Jackson, Eleftheria Zeggini, Rachel M. Freathy, Maris Laan, Paul Wordsworth, Sarah Nutland, Kerstin Koch, Sian Ceasar, Anders Hamsten, Judith M. Hussey, Tariq Ahmad, Derek P. Jewell, Paul Scheet, Charlie W. Lees, C Farrar, Christopher Prowse, Markku Laakso, David St Clair, Kate Downes, Diederick E. Grobbee, Paul Burton, Simon C. Potter, Ian N. Bruce, Tim D. Spector, Anne Barton, H.-Erich Wichmann, Matthew J. Simmonds, David Hadley, Cecilia M. Lindgren, Gérard Waeber, Nigel W. Rayner, Melanie J. Newport, Manjinder S. Sandhu, Audrey Duncanson, Guangju Zhai, Simon Heath, Susan M. Ring, Alessandra Di Gregorio, Richard Williamson, Nicholas J. Wareham, Zhan Su, Olle Melander, John R. Thompson, Alexander Teumer, Sheila A. Fisher, Lachlan J. M. Coin, Leif Groop, Giovanni Tognoni, Amanda Elkin, Alan J. Silman, Jack Satsangi, Jane Worthington, Martin Farrall, John Webster, Niall Cardin, Neil Walker, Anna F. Dominiczak, Jeremy D. Sanderson, Damjan Vukcevic, Bryan Howie, Silvia Polidoro, Stephen G. Ball, Mark Tremelling, Stephen Newhouse, Stephen M. Schwartz, Lori L. Bonnycastle, Chris Wallace, Kijoung Song, Mario A. Morken, I. Nicol Ferrier, Beverley Barke, Paolo Vineis, Manuela Uda, Deborah P M Symmons, Emily J. Lyons, Mingzhan Xue, Timothy M. Frayling, Stephen C.L. Cough, David Withers, Adrian V. S. Hill, Suzanne Stevens, Jennifer Jolley, Marcus Dörr, Kirk A. Rockett, David B. Dunger, Mark Walker, Jayne A. Franklyn, Lisa Jones, David S. Siscovick, Ann-Christine Syvänen, Laura J. Scott, Morris J. Brown, Barbera Cant, Michael Inouye, Feng Zhang, Carlotta Sacerdote, Katherine S. Elliott, Jonathan Marchini, Peter Donnely, Michael John Owen, An Goris, Marcus Prembey, Andrew T. Hattersley, Gerome Breen, Marian L. Hamshere, Thomas Illig, Samer S. Najjar, Nicole Soranzo, Kay-Tee Khaw, Graham R. Walters, Willem H. Ouwehand, David P. Strachan, Martin D. Tobin, Alastair Compston, John C. Mansfield, David Altshuler, Salvatore Panico, Sekar Kathiresan, Dawn M. Waterworth, Michael N. Weedon, D. Timothy Bishop, Claire Bryan, Alexandra S. Knight, Kate L. Lee, Paul F. O'Reilly, Massimo Mangino, Michael Conlon O'Donovan, Jing Hua Zhao, Konstantinos A. Papadakis, Jennifer H. Barrett, Joanne Pereira-Gale, N J Timpson, Stephan B. Felix, Panos Deloukas, Nicholas A. Watkins, Anna-Liisa Hartikainen, Peter Vollenweider, Richard Jones, Anne Hinks, Fraser Cummings, Noha Lim, Linda A. Bradbury, Rhian G. William, Nita G. Forouhi, Roberto Eluosa, Ingeleif B. Hallgrimsdottir, Giorgio Sirugo, Robert Luben, Veikko Salomaa, Robert Clarke, Sally John, Ursula Everson, Emma King, Ivan Nikolov, Heather M. Stringham, Antony P. Attwood, Angelo Scuteri, Wellcome Trust Case Control Consortium, Burton, PR., Clayton, DG., Cardon, LR., Craddock, N., Deloukas, P., Duncanson, A., Kwiatkowski, DP., McCarthy, MI., Ouwehand, WH., Samani, NJ., Todd, JA., Donnelly, P., Barrett, JC., Davison, D., Easton, D., Evans, D., Leung, HT., Marchini, JL., Morris, AP., Spencer, IC., Tobin, MD., Attwood, AP., Boorman, JP., Cant, B., Everson, U., Hussey, JM., Jolley, JD., Knight, AS., Koch, K., Meech, E., Nutland, S., Prowse, CV., Stevens, HE., Taylor, NC., Walters, GR., Walker, NM., Watkins, NA., Winzer, T., Jones, RW., McArdle, WL., Ring, SM., Strachan, DP., Pembrey, M., Breen, G., St Clair, D., Caesar, S., Gordon-Smith, K., Jones, L., Fraser, C., Green, EK., Grozeva, D., Hamshere, ML., Holmans, PA., Jones, IR., Kirov, G., Moskvina, V., Nikolov, I., O'Donovan, MC., Owen, MJ., Collier, DA., Elkin, A., Farmer, A., Williamson, R., McGuffin, P., Young, AH., Ferrier, IN., Ball, SG., Balmforth, AJ., Barrett, JH., Bishop, DT., Iles, MM., Maqbool, A., Yuldasheva, N., Hall, AS., Braund, PS., Dixon, RJ., Mangino, M., Stevens, S., Thompson, JR., Bredin, F., Tremelling, M., Parkes, M., Drummond, H., Lees, CW., Nimmo, ER., Satsangi, J., Fisher, SA., Forbes, A., Lewis, CM., Onnie, CM., Prescott, NJ., Sanderson, J., Mathew, CG., Barbour, J., Mohiuddin, MK., Todhunter, CE., Mansfield, JC., Ahmad, T., Cummings, FR., Jewell, DP., Webster, J., Brown, MJ., Lathrop, GM., Connell, J., Dominiczak, A., Braga Marcano, CA., Burke, B., Dobson, R., Gungadoo, J., Lee, KL., Munroe, PB., Newhouse, SJ., Onipinla, A., Wallace, I., Xue, M., Caulfield, M., Farrall, M., Barton, A., Bruce, IN., Donovan, H., Eyre, S., Gilbert, PD., Hider, SL., Hinks, AM., John, SL., Potter, C., Silman, AJ., Symmons, DP., Thomson, W., Worthington, J., Dunger, DB., Widmer, B., Frayling, TM., Freathy, RM., Lango, H., Perry, JR., Shields, BM., Weedon, MN., Hattersley, AT., Hitman, GA., Walker, M., Elliott, KS., Groves, CJ., Lindgren, CM., Rayner, NW., Timpson, NJ., Zeggini, E., Newport, M., Sirugo, G., Lyons, E., Vannberg, F., Hill, AV., Bradbury, LA., Farrar, C., Pointon, JJ., Wordsworth, P., Brown, MA., Franklyn, JA., Heward, JM., Simmonds, MJ., Gough, SC., Seal, S., Stratton, MR., Rahman, N., Ban, M., Goris, A., Sawcer, SJ., Compston, A., Conway, D., Jallow, M., Rockett, KA., Bryan, C., Bumpstead, SJ., Chaney, A., Downes, K., Ghori, J., Gwilliam, R., Hunt, SE., Inouye, M., Keniry, A., King, E., McGinnis, R., Potter, S., Ravindrarajah, R., Whittaker, P., Withers, D., Cardin, NJ., Ferreira, T., Pereira-Gale, J., Hallgrimsdóttir, IB., Howie, BN., Su, Z., Teo, YY., Vukcevic, D., Bentley, D., Life Course Epidemiology (LCE), Cardiovascular Centre (CVC), Lifestyle Medicine (LM), Groningen Kidney Center (GKC), Vascular Ageing Programme (VAP), and Medical Research Council (MRC)
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Hemodynamics ,Genome-wide association study ,Blood Pressure ,030204 cardiovascular system & hematology ,0302 clinical medicine ,Diastole ,11 Medical and Health Sciences ,POPULATION ,Genetics ,Genetics & Heredity ,RISK ,0303 health sciences ,education.field_of_study ,Econometric and Statistical Methods: General ,CELL-DIFFERENTIATION ,biology ,Intracellular Signaling Peptides and Proteins ,Chromosome Mapping ,Steroid 17-alpha-Hydroxylase ,COMMON VARIANTS ,3. Good health ,DNA-Binding Proteins ,Europe ,Cardiovascular Diseases ,PUBLIC-HEALTH ,BARTTERS-SYNDROME ,Blood Pressure/genetics ,Cardiovascular Diseases/genetics ,Cardiovascular Diseases/physiopathology ,Cytochrome P-450 CYP1A2/genetics ,DNA-Binding Proteins/genetics ,Diastole/genetics ,European Continental Ancestry Group/genetics ,Fibroblast Growth Factor 5/genetics ,Genetic Variation ,Genome-Wide Association Study ,Humans ,India ,Methylenetetrahydrofolate Reductase (NADPH2)/genetics ,Open Reading Frames/genetics ,Phospholipase C delta/genetics ,Polymorphism, Single Nucleotide ,Proteins/genetics ,Steroid 17-alpha-Hydroxylase/genetics ,Systole/genetics ,Wellcome Trust Case Control Consortium ,Life Sciences & Biomedicine ,hypertension ,Fibroblast Growth Factor 5 ,Systole ,Population ,European Continental Ancestry Group ,METHYLENETETRAHYDROFOLATE REDUCTASE GENE ,Single-nucleotide polymorphism ,LOW-RENIN HYPERTENSION ,White People ,Article ,03 medical and health sciences ,Open Reading Frames ,Fibroblast growth factor-5 ,Cytochrome P-450 CYP1A2 ,Geneeskunde(GENK) ,education ,Methylenetetrahydrofolate Reductase (NADPH2) ,Adaptor Proteins, Signal Transducing ,030304 developmental biology ,Genetic association ,genome-wide association ,Science & Technology ,MUTATIONS ,Proteins ,06 Biological Sciences ,POLYMORPHISM ,Blood pressure ,Methylenetetrahydrofolate reductase ,biology.protein ,biology.gene ,Phospholipase C delta ,Developmental Biology - Abstract
Elevated blood pressure is a common, heritable cause of cardiovascular disease worldwide. To date, identification of common genetic variants influencing blood pressure has proven challenging. We tested 2.5 million genotyped and imputed SNPs for association with systolic and diastolic blood pressure in 34,433 subjects of European ancestry from the Global BPgen consortium and followed up findings with direct genotyping (N ≤ 71,225 European ancestry, N ≤ 12,889 Indian Asian ancestry) and in silico comparison (CHARGE consortium, N = 29,136). We identified association between systolic or diastolic blood pressure and common variants in eight regions near the CYP17A1 (P = 7 × 10(-24)), CYP1A2 (P = 1 × 10(-23)), FGF5 (P = 1 × 10(-21)), SH2B3 (P = 3 × 10(-18)), MTHFR (P = 2 × 10(-13)), c10orf107 (P = 1 × 10(-9)), ZNF652 (P = 5 × 10(-9)) and PLCD3 (P = 1 × 10(-8)) genes. All variants associated with continuous blood pressure were associated with dichotomous hypertension. These associations between common variants and blood pressure and hypertension offer mechanistic insights into the regulation of blood pressure and may point to novel targets for interventions to prevent cardiovascular disease.
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- 2009
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21. The prevalence, clinical features and association of HLA-B27 in sacroiliitis associated with established Crohn’s disease
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Derek P. Jewell, H. Holt, B P Wordsworth, Eugene McNally, Linda A. Bradbury, Timothy R. Orchard, and J. Hammersma
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Adult ,Male ,medicine.medical_specialty ,Time Factors ,Disease ,Crohn Disease ,Risk Factors ,Internal medicine ,Prevalence ,medicine ,Humans ,Pharmacology (medical) ,Sacroiliitis ,HLA-B27 Antigen ,Crohn's disease ,Ankylosing spondylitis ,HLA-B27 ,Hepatology ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,Sacroiliac Joint ,Magnetic resonance imaging ,medicine.disease ,Low back pain ,Surgery ,Female ,medicine.symptom ,business ,Complication ,Low Back Pain ,Follow-Up Studies ,Spondylitis - Abstract
Summary Background Sacroiliitis is a recognized complication of Crohn’s disease and may occur distinct from progressive ankylosing spondylitis (AS). Aim To estimate prospectively the prevalence of sacroiliitis in patients with established Crohn’s disease, to characterize the clinical features and to correlate these with the presence of HLA-B27. Methods All Crohn's disease patients under active follow-up of between 5 and 12 years duration were invited to participate. Patients underwent a clinical evaluation including symptom questionnaire, rheumatological examination and underwent HLA genotyping. Patients then underwent magnetic resonance imaging (MRI) of the sacroiliac joints. The clinical and radiological factors were correlated with HLA-B27 status. Results 56 patients underwent initial assessment and 44 had MRI scans. Seventeen of 44 (39%) patients had MRI evidence of sacroiliitis, of whom 5 fulfilled the criteria for AS. Symptoms of low back pain were elicited in a majority of these patients – 11/17 (65%) compared to 3 of 27 (11%) patients with normal scans (P = 0.003). There were no differences in functional indices with the exception of patients with AS. HLA-B27 was present in seven patients, and all seven had MRI evidence of sacroiliitis, five had AS. Conclusions Sacroiliitis is common in patients with established Crohn’s disease and in the majority of cases, patients have symptoms of inflammatory low back pain if questioned carefully. HLA-B27 is not associated with isolated sacroiliitis, but is associated with AS. However, possession of HLA-B27 appears to convey a very high risk of developing axial inflammation in Crohn’s disease.
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- 2009
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22. ERAP2 is associated with ankylosing spondylitis in HLA-B27-positive and HLA-B27-negative patients
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John D. Reveille, Seung Cheol Shim, Maxime Breban, Walter P. Maksymowych, Maria Consuelo Romero-Sanchez, Kari Laiho, Kyung Bin Joo, Javier Martin, Nigil Haroon, C.T. Chou, Ruben Burgos-Vargas, Øystein Førre, Lianne S. Gensler, Henri Jean Garchon, Kelly A. Hollis, Robert D. Inman, Yu Liu, Huji Xu, Tae-Hwan Kim, Irene E. van der Horst-Bruinsma, Juan Mulero, Proton Rahman, Michael H. Weisman, Dirk Elewaut, Paul Bowness, Gilles Chiocchia, Johannes C. Nossent, Benedicte A. Lie, Karl Gafney, Matthew A. Brown, Xin Wu, Jaakko Tuomilehto, Carlos López-Larrea, Linda A. Bradbury, Dafna D. Gladman, Simon Stebbings, J. S. H. Gaston, Seung-Hun Lee, Mary-Ellen Costello, Raphael Valle-Oñate, Philip Robinson, Michael Ward, Adrian Cortes, Xiaodong Zhou, José Luis Fernández-Sueiro, Lei Jiang, David M. Evans, Fernando Pimentel-Santos, B. Paul Wordsworth, Inger Myrnes Hansen, Paul Leo, Miguel A. Gonzalez-Gay, Rheumatology, and CCA - Disease profiling
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Genetics ,HLA-B27 ,Linkage disequilibrium ,business.industry ,Immunology ,Locus (genetics) ,Human leukocyte antigen ,Endoplasmic reticulum aminopeptidase 2 ,Aminopeptidases ,General Biochemistry, Genetics and Molecular Biology ,Article ,Logistic Models ,Rheumatology ,Gene interaction ,Haplotypes ,Genetic Loci ,Immunology and Allergy ,Medicine ,Humans ,Spondylitis, Ankylosing ,Allele ,business ,HLA-B27 Antigen ,Genetic association - Abstract
The association of endoplasmic reticulum aminopeptidase 2 (ERAP2) with ankylosing spondylitis (AS) was recently described in the large International Genetics of AS Consortium Immunochip study. Variants in ERAP2 have also been associated with inflammatory bowel disease, psoriasis, acute anterior uveitis and birdshot chorioretinopathy. Subsequent investigation demonstrated an association of ERAP2 with AS which was present when one conditioned on one of the two independent haplotypes of ERAP1 associated with AS or when HLA-B27-negative patients were analysed separately. These two analyses provide analogous evidence for the association of ERAP2 with AS in HLA-B27-negative cases because of the genetic interaction between HLA-B27 and the AS-associated ERAP1 variants in AS cases. ERAP1 and ERAP2 are located on chromosome 5q15 in the opposite orientation. The locus is challenging to analyse because of the strong linkage disequilibrium (LD) across the locus and the epistasis between ERAP1 and HLA-B alleles associated with AS. We therefore sought to investigate the association of ERAP2 with AS in HLA-B27-positive patients. This is of clinical importance because functional studies have demonstrated that the strongly AS-protective variant rs2248374 causes a functional ERAP2 protein knockout, because its G allele causes a loss of ERAP2 protein expression. There is also a variant of ERAP2 which changes its enzyme catalytic activity and specificity (rs2549782, K392A). Because this is in almost complete LD with rs2248374 (1000 Genomes D′=1.00, r2=0.90), it is almost never translated in vivo. Further, the very strong LD between these markers means that analysis of rs2549782 for association would yield results almost identical to the results for rs2248374 presented below. Therefore, it is of relevance to determine whether the association of ERAP2 with HLA-B27-negative disease is also found in HLA-B27-positive cases, since ERAP inhibition may offer a novel therapeutic for AS...
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- 2015
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23. ERAP2 functional knockout in humans does not alter surface heavy chains or HLA-B27, inflammatory cytokines or endoplasmic reticulum stress markers
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Gethin P. Thomas, Eugene Lau, Max C Lau, Philip Robinson, Patricia Keith, Tony J. Kenna, Linda A. Bradbury, and Matthew A. Brown
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medicine.medical_treatment ,Immunology ,Gene Expression ,Receptors, Antigen, B-Cell ,Human leukocyte antigen ,Biology ,Aminopeptidases ,Polymerase Chain Reaction ,Polymorphism, Single Nucleotide ,General Biochemistry, Genetics and Molecular Biology ,Proinflammatory cytokine ,Rheumatology ,medicine ,Immunology and Allergy ,Humans ,Spondylitis, Ankylosing ,RNA, Messenger ,Endoplasmic Reticulum Chaperone BiP ,HLA-B27 Antigen ,Heat-Shock Proteins ,Transcription Factor CHOP ,HLA-B27 ,Interleukin-6 ,Tumor Necrosis Factor-alpha ,Endoplasmic reticulum ,Interleukins ,Interleukin-17 ,Endoplasmic Reticulum Stress ,Cytokine ,Case-Control Studies ,Unfolded protein response ,Leukocytes, Mononuclear ,Cytokines ,Gene polymorphism ,Immunoglobulin Heavy Chains - Abstract
Introduction Single nucleotide polymorphisms in ERAP2 are strongly associated with ankylosing spondylitis (AS). One AS-associated single nucleotide polymorphism, rs2248374, causes a truncated ERAP2 protein that is degraded by nonsense-mediated decay. Approximately 25% of the populations of European ancestry are therefore natural ERAP2knockouts. We investigated the effect of this associated variant on HLA class I allele presentation, surface heavy chains, endoplasmic reticulum (ER) stress markers and cytokine gene transcription in AS. Methods Patients with AS and healthy controls with either AA or GG homozygous status for rs2248374 were studied. Antibodies to CD14, CD19-ECD, HLA-A-B-C, Valpha7.2, CD161, anti-HC10 and anti-HLA-B27 were used to analyse peripheral blood mononuclear cells. Expression levels of ER stress markers (GRP78 and CHOP) and proinflammatory genes (tumour necrosis factor (TNF), IL6, IL17 and IL22) were assessed by qPCR. Results There was no significant difference in HLA-class I allele presentation or major histocompatibility class I heavy chains or ER stress markers GRP78 and CHOP or proinflammatory gene expression between genotypes for rs2248374 either between cases, between cases and controls, and between controls. Discussion Large differences were not seen in HLA-B27 expression or cytokine levels between subjects with and without ERAP2 in AS cases and controls. This suggests that ERAP2 is more likely to influence AS risk through other mechanisms.
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- 2015
24. Developing nursing research
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Linda A. Bradbury, Alison Kitson, and K Clipsham
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Advanced and Specialized Nursing ,Clinical Practice ,Response rate (survey) ,Evidence-based practice ,Nursing ,business.industry ,Nursing research ,Action plan ,Medicine ,Orthopedics and Sports Medicine ,Research process ,business ,Know-how - Abstract
Following an information-giving workshop to senior nurses within the hospital by the Research Nurse Group, a research-practice gap was identified. To ascertain the extent of this, a survey with an explanatory letter was distributed to all qualified nurses within the Trust. Although initially the response rate was thought to be low, it compared favourably to other studies. Results showed that 45% of respondents did not feel confident to undertake a research project but more than 80% felt that research was a part of their clinical role and was relevant to nursing. Three-quarters of respondents also acknowledged that they had read a paper resulting in a change in their clinical practice. When asked about skills and resources, 29% did not know how to conduct a literature search and 39% were unable to critically appraise a paper. Furthermore, 62% did not know what resources were available when considering a research project of their own. It was concluded therefore, that the research-practice gap does exist and nurses need encouragement and support in the implementation of the research process. In view of these conclusions, an action plan was developed.
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- 2005
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25. IBMS-ECTS 2005 Abstracts
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P Schofield, A Blumsohn, Roslin Russell, Wass Jah., S Barlow, Emma L. Duncan, Linda A. Bradbury, F Geoghenan, and Matthew A. Brown
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0303 health sciences ,medicine.medical_specialty ,Histology ,Physiology ,business.industry ,Endocrinology, Diabetes and Metabolism ,0206 medical engineering ,02 engineering and technology ,Standard score ,medicine.disease ,020601 biomedical engineering ,Surgery ,Bone remodeling ,03 medical and health sciences ,Osteogenesis imperfecta ,Dysplasia ,Internal medicine ,medicine ,Lumbar spine ,Analysis of variance ,Inherited disease ,Bone marker ,business ,030304 developmental biology - Abstract
Osteogenesis imperfecta (OI) is an inherited disease of bone fragility, usually due to mutation in type 1 collagen. High dose IV bisphosphonates are widely used in children with severe OI. OI type 1 (_mild_ OI) results from decreased synthesis of type 1 collagen; patients also have increased bone turnover. Patients with OI type 1 are often prescribed oral bisphosphonates although to date there is no data regarding the effects in this patient group or the required dose. Patients with OI type 1 were recruited from the metabolic bone and skeletal dysplasia clinics of the Nuffield Orthopaedic Centre, Oxford, UK; from local bone physicians; and from self referral. Entry criteria included age over 18 years, a clinical history of OI type 1, no other conditions contributing to low BMD (assessed by history and biochemical tests), and active contraception in fertile women. Patients were prescribed risedronate (either 5mg daily or 35 mg weekly) for 24 months.BMDwas assessed at lumbar spine (LS) and total hip using Hologic Discovery DXA scanning at time 0 and 24 months. Bone turnover markers (serum P1NP and bonespecific ALP) were assessed at time 0, 6, 12 and 24 months. BMD results were analysed using the paired t test; bone marker results by repeat measurements ANOVA. To date, 18 patients have completed the study (8 men, 10 women, mean age 39 years with range 18 to 76 at entry). At baseline, mean BMDat LS was 0.820 g/cm2 (t score =2.23, z score = 2.02). At 24 months, BMD significantly improved to 0.850 g/cm2, an increase of 3.7% (P = 0.008) (mean t score = 1.94 with mean z score = 1.93). At total hip, mean BMD at baseline was 0.873 g/cm2 (t score = 0.77, z score = 0.56) with no significant change seen at 24 months (P = 0.81). Bone turnover markers showed a significant drop in P1NP (P1NP= 33.6 ng/mL at baseline; P1NP = 18.0 ng/mL at 24 months; P = 0.008; a fall of 47% of baseline value) which was evident by 6 months (P1NP = 23.2 ng/mL; P = 0.002 compared with baseline). There was no significant change in BAP (P = 0.1). This study demonstrates that patients with OI type 1 can respond to oral bisphosphonates at standard doses for idiopathic osteoporosis with significant gain in BMD and decrease in bone turnover, surrogate measures for improved bone strength in these fragile bones. This study was supported by an unrestricted educational grant from Procter and Gamble Ltd.
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- 2005
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26. Investigation of the role ofANKHin ankylosing spondylitis
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Andrew E. Timms, Youming Zhang, B P Wordsworth, Linda A. Bradbury, and Matthew A. Brown
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Genetics ,business.industry ,Immunology ,Locus (genetics) ,Single-nucleotide polymorphism ,Gene mutation ,medicine.disease ,Genetic determinism ,Exon ,Rheumatology ,Genetic linkage ,Immunology and Allergy ,Medicine ,Pharmacology (medical) ,business ,Allele frequency ,Chondrocalcinosis - Abstract
Objective. The ank/ank mouse develops a phenotype similar to ankylosing spondylitis (AS) in humans. ANKH, the human homolog of the mutated gene in the ank/ank mouse, has been implicated in familial autosomal-dominant chondrocalcinosis and autosomal-dominant craniometaphyseal dysplasia. This study was undertaken to investigate the role of ANKH in susceptibility to and clinical manifestations of AS. Methods. Sequence variants were identified by genomic sequencing of the 12 ANKH exons and their flanking splice sites in 48 AS patients; variants were then screened in 233 patients and 478 controls. Linkage to the ANKH locus was assessed in 185 affected-sibling-pair families. Results. Five single-nucleotide polymorphisms were identified within the coding region and flanking splice sites. No association between either susceptibility to AS or its clinical manifestations and these novel polymorphisms, or between disease susceptibility and 3 known promoter variants, was seen. No linkage between the ANKH locus and AS was observed. Multipoint exclusion mapping rejected the hypothesis of a locus of a magnitude lambdagreater than or equal to1.4 (logarithm of odds score 10% to the AS sibling recurrence risk ratio) within this area contributing to AS. Conclusion. These findings indicate that ANKH is not significantly involved in susceptibility to or clinical manifestations of AS.
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- 2003
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27. COL1A1 C-propeptide cleavage site mutation causes high bone mass, bone fragility and jaw lesions: a new cause of gnathodiaphyseal dysplasia?
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Andreas Zankl, Brooke Gardiner, Graeme R. Clark, Emma L. Duncan, Paul Leo, Linda A. Bradbury, Matthew A. Brown, Jessica Harris, and Aideen M. McInerney-Leo
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musculoskeletal diseases ,Male ,Pathology ,medicine.medical_specialty ,Bone density ,Gnathodiaphyseal dysplasia ,DNA Mutational Analysis ,Gene mutation ,Bone and Bones ,Collagen Type I ,Bone Density ,Genetics ,medicine ,Humans ,Exome ,Genetics (clinical) ,Massive parallel sequencing ,business.industry ,Anatomy ,Osteogenesis Imperfecta ,medicine.disease ,Pedigree ,Collagen Type I, alpha 1 Chain ,Radiography ,Skull ,medicine.anatomical_structure ,Phenotype ,Jaw ,Osteogenesis imperfecta ,Irregular bone ,Mutation ,Female ,business ,Type I collagen - Abstract
Gnathodiaphyseal dysplasia (GDD) is a rare autosomal dominant condition characterized by bone fragility, irregular bone mineral density (BMD) and fibro-osseous lesions in the skull and jaw. Mutations in Anoctamin-5 (ANO5) have been identified in some cases. We aimed to identify the causative mutation in a family with features of GDD but no mutation in ANO5, using whole exome capture and massive parallel sequencing (WES). WES of two affected individuals (a mother and son) and the mother's unaffected parents identified a mutation in the C-propeptide cleavage site of COL1A1. Similar mutations have been reported in individuals with osteogenesis imperfecta (OI) and paradoxically increased BMD. C-propeptide cleavage site mutations in COL1A1 may not only cause 'high bone mass OI', but also the clinical features of GDD, specifically irregular sclerotic BMD and fibro-osseous lesions in the skull and jaw. GDD patients negative for ANO5 mutations should be assessed for mutations in type I collagen C-propeptide cleavage sites.
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- 2014
28. Utility of temporal artery biopsy samples for genome-wide analysis of giant cell arteritis
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Penny McKelvie, Katie Cremin, Linda A. Bradbury, Alex W. Hewitt, Jessica Harris, Matthew A. Brown, E. De Smit, Paul Leo, and Christopher Hill
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Pathology ,medicine.medical_specialty ,Microarray ,Genotyping Techniques ,Immunology ,Giant Cell Arteritis ,Reproducibility of Results ,Genome-wide association study ,Single-nucleotide polymorphism ,Biology ,medicine.disease ,Polymorphism, Single Nucleotide ,Temporal Arteries ,Giant cell arteritis ,Genotype ,Genetics ,medicine ,Humans ,Vasculitis ,Genotyping ,Genetics (clinical) ,Aged ,Genome-Wide Association Study - Abstract
Giant Cell Arteritis (GCA) is the most common vasculitis affecting the elderly. Archived formalin-fixed paraffin-embedded (FFPE) temporal artery biopsy (TAB) specimens potentially represent a valuable resource for large-scale genetic analysis of this disease. FFPE TAB samples were obtained from 12 patients with GCA. Extracted TAB DNA was assessed by real time PCR before restoration using the Illumina HD FFPE Restore Kit. Paired FFPE-blood samples were genotyped on the Illumina OmniExpress FFPE microarray. The FFPE samples that passed stringent quality control measures had a mean genotyping success of >97%. When compared with their matching peripheral blood DNA, the mean discordant heterozygote and homozygote single nucleotide polymorphisms calls were 0.0028 and 0.0003, respectively, which is within the accepted tolerance of reproducibility. This work demonstrates that it is possible to successfully obtain high-quality microarray-based genotypes FFPE TAB samples and that this data is similar to that obtained from peripheral blood.
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- 2014
29. Whole-Genome Screening in Ankylosing Spondylitis: Evidence of Non-MHC Genetic-Susceptibility Loci
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Matthew A. Brown, S Laval, B P Wordsworth, Linda A. Bradbury, S Edwards, L. Rubin, Daniel E. Weeks, Andrei Calin, Anita Milicic, Andrew E. Timms, Kathy Siminovitch, and Sinead Brophy
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Male ,Genotype ,Matched-Pair Analysis ,Locus (genetics) ,Major histocompatibility complex ,Statistics, Nonparametric ,Genetic determinism ,Nuclear Family ,Cohort Studies ,Major Histocompatibility Complex ,03 medical and health sciences ,0302 clinical medicine ,Genetic linkage ,Genetics ,medicine ,Genetic predisposition ,Chromosomes, Human ,Humans ,Genetics(clinical) ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,Genetic Testing ,Spondylitis ,Genetics (clinical) ,030304 developmental biology ,Genetic testing ,030203 arthritis & rheumatology ,0303 health sciences ,Ankylosing spondylitis ,medicine.diagnostic_test ,biology ,Genome, Human ,Chromosome Mapping ,Articles ,medicine.disease ,biology.protein ,Female ,Lod Score ,Software - Abstract
Ankylosing spondylitis (AS) is a common inflammatory arthritis predominantly affecting the axial skeleton. Susceptibility to the disease is thought to be oligogenic. To identify the genes involved, we have performed a genomewide scan in 185 families containing 255 affected sibling pairs. Two-point and multipoint nonparametric linkage analysis was performed. Regions were identified showing “suggestive” or stronger linkage with the disease on chromosomes 1p, 2q, 6p, 9q, 10q, 16q, and 19q. The MHC locus was identified as encoding the greatest component of susceptibility, with an overall LOD score of 15.6. The strongest non-MHC linkage lies on chromosome 16q (overall LOD score 4.7). These results strongly support the presence of non-MHC genetic-susceptibility factors in AS and point to their likely locations.
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- 2001
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30. Is disease severity in ankylosing spondylitis genetically determined?
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Linda A. Bradbury, Andrei Calin, Sinead Brophy, Matthew A. Brown, J. Hamersma, I E van der Horst-Bruinsma, and Lon R. Cardon
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medicine.medical_specialty ,Ankylosing spondylitis ,business.industry ,Immunology ,Heritability ,medicine.disease ,Genetic correlation ,Rheumatology ,Internal medicine ,medicine ,Genetic predisposition ,Physical therapy ,Immunology and Allergy ,Pharmacology (medical) ,Age of onset ,business ,BASFI ,Spondylitis ,BASDAI - Abstract
Objective. To assess the role of genes and the environment in determining the severity of ankylosing spondylitis. Methods. One hundred seventy-three families with >1 case of ankylosing spondylitis were recruited (120 affected sibling pairs, 26 affected parent-child pairs, 20 families with both first- and second-degree relatives affected, and 7 families with only second-degree relatives affected), comprising a total of 384 affected individuals. Disease severity was assessed by the Bath Ankylosing Spondylitis Disease Activity Index (BASDAI) and functional impairment was determined using the Bath Ankylosing Spondylitis Functional Index (BASFI). Disease duration and age at onset were also studied. Variance-components modeling was used to determine the genetic and environmental components contributing to familiality of the traits examined, and complex segregation analysis was performed to assess different disease models. Results. Both the disease activity and functional capacity as assessed by the BASDAI and the BASFI, respectively, were found to be highly familial (BASDAI familiality 0.51 [p = 10(-4)], BASFI familiality 0.68 [P = 3 x 10(-7)]). No significant shared environmental component was demonstrated to be associated with either the BASDAI or the BASFI. Including age at disease onset and duration of disease as covariates made no difference in the heritability assessments. A strong correlation was noted between the BASDAI and the BASFI (genetic correlation 0.9), suggesting the presence of shared determinants of these 2 measures. However, there was significant residual heritability for each measure independent of the other (BASFI residual heritability 0.48, BASDAI 0.36), perhaps indicating that not all genes influencing disease activity influence chronicity. No significant heritability of age at disease onset was found (heritability 0.18; P = 0.2). Segregation studies suggested the presence of a single major gene influencing the BASDAI and the BASFI. Conclusion. This study demonstrates a major genetic contribution to disease severity in ankylosing spondylitis. As with susceptibility to ankylosing spondylitis, shared environmental factors play little role in determining the disease severity.
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- 2001
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31. Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci
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Peter Donnelly, Tugce Karaderi, Dafna D. Gladman, Shim S-C., Karl Gafney, Crusius Jba., J Mulero, Karena Pryce, Proton Rahman, Louise Appleton, Matthew A. Brown, Johanna Hadler, Vibeke Videm, R. Valle-Oñate, Jian Yang, Consuelo Romero-Sánchez, José Luis Fernández-Sueiro, Tony J. Kenna, Øystein Førre, Inger Myrnes Hansen, Hill Gaston, Lei Jiang, David M. Evans, Huji Xu, B P Wordsworth, Jessica Harris, Kim T-H., Panagiotis Deloukas, Gilles Chiocchia, Simon Stebbings, Benedicte A. Lie, Minghong Ward, Adrian Cortes, Javier Martín, J. D. Reveille, Philip Robinson, Maxime Breban, Michael H. Weisman, Dirk Elewaut, Walter P. Maksymowych, Xiaodong Zhou, Garchon H-J., Johannes C. Nossent, Yu Liu, Xin Wu, Nigil Haroon, J. Tuomilehto, Claire Farrah, Fernando Pimentel-Santos, Paul Leo, Miguel A. Gonzalez-Gay, J.P. Pointon, Paul Bowness, Carlos López-Larrea, Kyung Bin Joo, Ruben Burgos-Vargas, I E van der Horst-Bruinsma, Manuel A. R. Ferreira, K. Laiho, Sang-Gug Lee, Robert D. Inman, Katie Cremin, Chou C-T., J. Lau, Linda A. Bradbury, Rheumatology, CCA - Disease profiling, and Medical Microbiology and Infection Prevention
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HLA CLASS-I ,GENETIC SUSCEPTIBILITY ,Genotype ,Genotyping Techniques ,DISEASE SUSCEPTIBILITY LOCI ,DNA Mutational Analysis ,ENDOPLASMIC-RETICULUM ,Genome-wide association study ,medicine.disease_cause ,Major histocompatibility complex ,T-CELL ,ERAP1 ,Polymorphism, Single Nucleotide ,Article ,Autoimmunity ,ACTIVATION ,Immune System Phenomena ,Risk Factors ,Genetics ,medicine ,Medicine and Health Sciences ,Humans ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,GENOME-WIDE ASSOCIATION ,Spondylitis ,Genotyping ,COMMON ,Alleles ,HLA-B27 Antigen ,Ankylosing spondylitis ,BEHCETS-DISEASE ,biology ,Haplotype ,High-Throughput Nucleotide Sequencing ,medicine.disease ,Endoplasmic reticulum aminopeptidase 2 ,Genetic Loci ,Case-Control Studies ,Immunology ,biology.protein ,Genome-Wide Association Study - Abstract
Ankylosing spondylitis is a common, highly heritable inflammatory arthritis affecting primarily the spine and pelvis. In addition to HLA-B*27 alleles, 12 loci have previously been identified that are associated with ankylosing spondylitis in populations of European ancestry, and 2 associated loci have been identified in Asians. In this study, we used the Illumina Immunochip microarray to perform a case-control association study involving 10,619 individuals with ankylosing spondylitis (cases) and 15,145 controls. We identified 13 new risk loci and 12 additional ankylosing spondylitis-associated haplotypes at 11 loci. Two ankylosing spondylitis-associated regions have now been identified encoding four aminopeptidases that are involved in peptide processing before major histocompatibility complex (MHC) class I presentation. Protective variants at two of these loci are associated both with reduced aminopeptidase function and with MHC class I cell surface expression.
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- 2012
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32. Association of Variants at 1q32 and STAT3 with Ankylosing Spondylitis Suggests Genetic Overlap with Crohn's Disease
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Patrick Danoy, Karena Pryce, Johanna Hadler, Linda A. Bradbury, Claire Farrar, Jennifer Pointon, Australo-Anglo-American Spondyloarthritis Consortium (TASC), Michael Ward, Michael Weisman, John D. Reveille, B. Paul Wordsworth, Millicent A. Stone, Spondyloarthritis Research Consortium of Canada (SPARCC), Walter P. Maksymowych, Proton Rahman, Dafna Gladman, Robert D. Inman, and Matthew A. Brown
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Cancer Research ,Genetics ,Correction ,QH426-470 ,Molecular Biology ,Genetics (clinical) ,Ecology, Evolution, Behavior and Systematics - Abstract
[This corrects the article on p. e1001195 in vol. 6.].
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- 2011
33. Genome-Wide Association Study Using Extreme Truncate Selection Identifies Novel Genes Affecting Bone Mineral Density and Fracture Risk
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Kari Stefansson, Rajesh V. Thakker, Mark A. Kotowicz, J. B. Richards, Richard L. Prince, John D. Wark, K. Pryce, Cyrus Cooper, Johanna Hadler, S.C. Nguyen, Karol Estrada, K. Addison, Elaine M. Dennison, Margaret J. Henry, John P. Kemp, David M. Reid, Julie A. Pasco, Christopher T. Esapa, David M. Evans, Eugene V. McCloskey, Graeme Jones, P. N. Sambrook, Matthew A. Brown, Albert Hofman, Tuan V. Nguyen, Unnur Styrkarsdottir, Patrick Danoy, Linda A. Bradbury, Joanna Makovey, Gudmar Thorleifsson, R. Tichawangana, Claus-Christian Glüer, Dieter Felsenberg, Tim D. Spector, Fernando Rivadeneira, André G. Uitterlinden, Emma L. Duncan, Paul Leo, John A. Eisman, R. Eastell, Steve D.M. Brown, C. Roux, Roger D. Cox, G.C. Nicholson, Ian R. Reid, C. Cremin, Internal Medicine, Epidemiology, Pediatric Surgery, Family Medicine, and RS: CAPHRI School for Public Health and Primary Care
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Male ,Cancer Research ,Bone density ,Osteoporosis ,Genome-wide association study ,QH426-470 ,Diabetes and Endocrinology/Bone and Mineral Metabolism ,Bioinformatics ,Cohort Studies ,Fractures, Bone ,Mice ,0302 clinical medicine ,Bone Density ,Chromosomes, Human ,Osteoporosis, Postmenopausal ,Genetics and Genomics/Genetics of Disease ,Genetics (clinical) ,Aged, 80 and over ,Genetics ,0303 health sciences ,education.field_of_study ,Rheumatology/Bone and Mineral Metabolism ,Middle Aged ,3. Good health ,Models, Animal ,N-Acetylgalactosaminyltransferases ,Female ,Proteoglycans ,Research Article ,musculoskeletal diseases ,Genotype ,Population ,030209 endocrinology & metabolism ,Single-nucleotide polymorphism ,Biology ,Quantitative trait locus ,Polymorphism, Single Nucleotide ,SOXC Transcription Factors ,03 medical and health sciences ,Chloride Channels ,medicine ,Animals ,Humans ,Integrin-Binding Sialoprotein ,education ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Aged ,030304 developmental biology ,Genetic association ,Bone fracture ,medicine.disease ,Disease Models, Animal ,Latent TGF-beta Binding Proteins ,Case-Control Studies ,Mutation ,Thrombospondins ,Receptors, Transforming Growth Factor beta ,Developmental Biology ,Genome-Wide Association Study - Abstract
Osteoporotic fracture is a major cause of morbidity and mortality worldwide. Low bone mineral density (BMD) is a major predisposing factor to fracture and is known to be highly heritable. Site-, gender-, and age-specific genetic effects on BMD are thought to be significant, but have largely not been considered in the design of genome-wide association studies (GWAS) of BMD to date. We report here a GWAS using a novel study design focusing on women of a specific age (postmenopausal women, age 55–85 years), with either extreme high or low hip BMD (age- and gender-adjusted BMD z-scores of +1.5 to +4.0, n = 1055, or −4.0 to −1.5, n = 900), with replication in cohorts of women drawn from the general population (n = 20,898). The study replicates 21 of 26 known BMD–associated genes. Additionally, we report suggestive association of a further six new genetic associations in or around the genes CLCN7, GALNT3, IBSP, LTBP3, RSPO3, and SOX4, with replication in two independent datasets. A novel mouse model with a loss-of-function mutation in GALNT3 is also reported, which has high bone mass, supporting the involvement of this gene in BMD determination. In addition to identifying further genes associated with BMD, this study confirms the efficiency of extreme-truncate selection designs for quantitative trait association studies., Author Summary Osteoporotic fracture is a major cause of early mortality and morbidity in the community. To identify genes associated with osteoporosis, we have performed a genome-wide association study. In order to improve study power and to address the demographic group of highest risk from osteoporotic fracture, we have used a unique study design, studying 1,955 postmenopausal women with either extreme high or low hip bone mineral density. We then confirmed our findings in 20,898 women from the general population. Our study replicated 21 of 26 known osteoporosis genes, and it identified a further six novel loci (in or nearby CLCN7, GALNT3, IBSP, LTBP3, RSPO3, and SOX4). For one of these loci, GALTN3, we demonstrate in a mouse model that a loss-of-function genetic mutation in GALNT3 causes high bone mass. These findings report novel mechanisms by which osteoporosis can arise, and they significantly add to our understanding of the aetiology of the disease.
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- 2011
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34. Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci
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Panos Deloukas, Michael M. Ward, Linda A. Bradbury, Johanna Hadler, Jacqueline Taylor, Walter P. Maksymowych, L H Appleton, Xiaodong Zhou, R Mogg, Vasudev Kumanduri, Emma Pomeroy, Patrick Danoy, Tugce Karaderi, Karena Pryce, J J Pointon, John D. Reveille, Matthew A. Brown, Gethin P. Thomas, Evgeny A. Glazov, Susan M. Ring, Tracey Doan, John C. Davis, B. Paul Wordsworth, Pamela Whittaker, Ran Duan, David M. Evans, Robert D. Inman, Millicent A. Stone, Alison Dowling, C Farrar, David Harvey, Anne Marie Sims, Laura Diekman, Rui Jin, L. Savage, Leena Peltonen, Michael H. Weisman, Emma L. Duncan, and Paul Leo
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Interleukin-23 receptor ,Genetics ,Ankylosing spondylitis ,Reproducibility of Results ,Genome-wide association study ,Single-nucleotide polymorphism ,Biology ,medicine.disease ,Polymorphism, Single Nucleotide ,Article ,Cohort Studies ,Major Histocompatibility Complex ,Genetic Loci ,Immunology ,Genetic predisposition ,medicine ,Humans ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,Spondylitis ,Genetic association ,Histocompatibility gene ,Genome-Wide Association Study - Abstract
To identify susceptibility loci for ankylosing spondylitis, we undertook a genome-wide association study in 2,053 unrelated ankylosing spondylitis cases among people of European descent and 5,140 ethnically matched controls, with replication in an independent cohort of 898 ankylosing spondylitis cases and 1,518 controls. Cases were genotyped with Illumina HumHap370 genotyping chips. In addition to strong association with the major histocompatibility complex (MHC; P < 10(-800)), we found association with SNPs in two gene deserts at 2p15 (rs10865331; combined P = 1.9 x 10(-19)) and 21q22 (rs2242944; P = 8.3 x 10(-20)), as well as in the genes ANTXR2 (rs4333130; P = 9.3 x 10(-8)) and IL1R2 (rs2310173; P = 4.8 x 10(-7)). We also replicated previously reported associations at IL23R (rs11209026; P = 9.1 x 10(-14)) and ERAP1 (rs27434; P = 5.3 x 10(-12)). This study reports four genetic loci associated with ankylosing spondylitis risk and identifies a major role for the interleukin (IL)-23 and IL-1 cytokine pathways in disease susceptibility.
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- 2010
35. OP0201 Exomewide Association Study of Ankylosing Spondylitis Identifies Additional Coding Region Genetic Associations with as and Strengthens Evidence of Shared Genetic Background with Inflammatory Bowel Disease
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Andrew A. Harrison, Paul Wordsworth, Emma L. Duncan, Paul Leo, Linda A. Bradbury, Jessica Harris, Simon Stebbings, Matthew A. Brown, Philip Robinson, Katie Cremin, and J J Pointon
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Ankylosing spondylitis ,business.industry ,Immunology ,Single-nucleotide polymorphism ,Disease ,Human leukocyte antigen ,Heritability ,Population stratification ,medicine.disease ,Inflammatory bowel disease ,General Biochemistry, Genetics and Molecular Biology ,Rheumatology ,medicine ,Immunology and Allergy ,business ,CDKAL1 - Abstract
Background Ankylosing spondylitis is a common chronic immune-mediated arthropathy affecting primarily joints of the spine and pelvis. The condition is strongly associated with HLA-B27, and association with other HLA variants has been demonstrated. In addition to these effects, to date 30 non-MHC loci have been associated with the disease, and significant additional heritability remains. Objectives To identify further genetic variants associated with ankylosing spondylitis. Methods We undertook a study of ankylosing spondylitis using 5,040 patients and 21,133 healthy controls using the Illumina Exomechip microarray. This assays all coding variation in the genome along with genomewide association hits and major histocompatibility tag single nucleotide polymorphisms. Analysis was carried out with logistic regression using principal component analysis to correct for any population stratification. Results Novel associations achieving genomewide significance were found in USP8 ( P =3.5 x 10 -52 , OR =1.97) and CDKAL1 ( P =1.8 x10 -8 , OR =1.18). Suggestive associations with common variants in FAM118A ( P =5.9 x 10 -8 , OR =1.16), C7orf72 ( P =1.9 x 10 -7 , OR =1.14) and FAM114A1 ( P =1.4 x 10 -6 , OR =1.14) were also found. A low frequency association (MAF cases/controls: 0.0044/0.0017) was found in patatin-like phospholipase domain containing 1 ( PNPLA1) at a suggestive level of significance ( P =1.5 x 10 -6 , OR =2.6). Conclusions This study describes novel genetic associations with ankylosing spondylitis. Three of the variants have been previously associated with inflammatory bowel disease, and one variant with low hip bone mineral density. These findings further increase the evidence for the marked similarity of genetic risk factors for IBD and AS, consistent with the two diseases having very similar aetiopathogenesis. Disclosure of Interest None declared
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- 2015
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36. Identification of major loci controlling clinical manifestations of ankylosing spondylitis
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Linda A. Bradbury, Lon R. Cardon, S. Laval, Andrew E. Timms, Andrei Calin, J. Hamersma, Sinead Brophy, B. Paul Wordsworth, and Matthew A. Brown
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medicine.medical_specialty ,Genotype ,Immunology ,medicine.disease_cause ,Autoimmunity ,Rheumatology ,Genetic linkage ,Internal medicine ,medicine ,Immunology and Allergy ,Humans ,Pharmacology (medical) ,Genetic Predisposition to Disease ,Spondylitis, Ankylosing ,BASDAI ,Spondylitis ,Genetics ,Family Health ,Ankylosing spondylitis ,HLA-B27 ,business.industry ,Genome, Human ,Chromosomes, Human, Pair 11 ,medicine.disease ,Chromosomes, Human, Pair 6 ,Age of onset ,Lod Score ,BASFI ,business - Abstract
OBJECTIVE: To identify genomic regions linked with determinants of age at symptom onset, disease activity, and functional impairment in ankylosing spondylitis (AS). METHODS: A whole genome linkage scan was performed in 188 affected sibling pair families with 454 affected individuals. Traits assessed were age at symptom onset, disease activity assessed by the Bath Ankylosing Spondylitis Disease Activity Index (BASDAI), and functional impairment assessed by the Bath Ankylosing Spondylitis Functional Index (BASFI). Parametric and nonparametric quantitative linkage analysis was performed using parameters defined in a previous segregation study. RESULTS: Heritabilities of the traits studied in this data set were as follows: BASDAI 0.49 (P = 0.0001, 95% confidence interval [95% CI] 0.23-0.75), BASFI 0.76 (P = 10(-7), 95% CI 0.49-1.0), and age at symptom onset 0.33 (P = 0.005, 95% CI 0.04-0.62). No linkage was observed between the major histocompatibility complex (MHC) and any of the traits studied (logarithm of odds [LOD] score
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- 2003
37. Role of NOD2 variants in spondylarthritis
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Katherine A. Siminovitch, Andrei Calin, Matthew A. Brown, B. Paul Wordsworth, David A. van Heel, Laurence A. Rubin, Dermot P.B. McGovern, Sinead Brophy, A. M. Crane, and Linda A. Bradbury
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Adult ,medicine.medical_specialty ,Genotype ,Immunology ,Population ,Nod2 Signaling Adaptor Protein ,Inflammatory bowel disease ,Gastroenterology ,Polymorphism, Single Nucleotide ,Cohort Studies ,Rheumatology ,Risk Factors ,Internal medicine ,Spondylarthritis ,medicine ,Genetic predisposition ,Immunology and Allergy ,Humans ,Pharmacology (medical) ,Genetic Predisposition to Disease ,Age of Onset ,education ,Ankylosing spondylitis ,education.field_of_study ,business.industry ,Case-control study ,Intracellular Signaling Peptides and Proteins ,Proteins ,Odds ratio ,medicine.disease ,digestive system diseases ,Case-Control Studies ,Age of onset ,Lod Score ,business ,Carrier Proteins - Abstract
OBJECTIVE: To investigate the role of the gene NOD2 in susceptibility to, and clinical manifestations of, ankylosing spondylitis (AS). METHODS: A case-control study of NOD2 polymorphisms known to be associated with Crohn's disease (CD) (Pro(268)Ser, Arg(702)Trp, Gly(908)Arg, and Leu(1007)fsinsC) was performed in 229 cases of primary AS with no diagnosed inflammatory bowel disease (IBD), 197 cases of AS associated with IBD (referred to as colitic spondylarthritis; comprising 78 with CD and 119 with ulcerative colitis [UC]), and 229 ethnically matched, healthy controls. Associations between NOD2 polymorphisms and several clinical features of AS, including disease severity assessed by questionnaire and age at spondylarthritis onset, were also investigated. Exclusion linkage mapping of chromosome 16 was performed in a separate group of 185 multicase families with AS. RESULTS: An association was identified between Gly(908)Arg and UC spondylarthritis (P = 0.016, odds ratio [OR] 4.6, 95% confidence interval [95% CI] 1.3-16), and a nonsignificant trend with a similar magnitude was observed in association with CD spondylarthritis (P = 0.08, OR 3.9, 95% CI 0.8-18). The Pro(268)Ser variant was inversely associated with UC spondylarthritis (P = 0.003, OR 0.55, 95% CI 0.37-0.82), but not with CD spondylarthritis. No association was demonstrated between NOD2 variants and primary AS, or between other variants of NOD2 and either UC or CD spondylarthritis. Carriage of the Pro(268)Ser polymorphism was associated with greater disease activity as measured by the Bath Ankylosing Spondylitis Disease Activity Index (P = 0.002). Although patients with CD had a younger age at spondylarthritis onset than did those with UC (22.4 years versus 26.4 years; P = 0.01), no association was noted between the NOD2 variants linked with CD and age at spondylarthritis onset. In primary AS, the presence of a gene with a magnitude of association >2.0 was excluded (exclusion logarithm of odds score less than -2.0), and no association was observed with the microsatellite D16S3136. CONCLUSION: NOD2 variants do not significantly affect the risk of developing primary AS, but may influence susceptibility to, and clinical manifestations of, colitic spondylarthritis.
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- 2002
38. THU0493 Association of the Toll-Like Receptor 4 (TLR4) Gene with Gout
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Tony R. Merriman, Michael Doherty, Nicola Dalbeth, Malcolm D. Smith, Richard O. Day, T.L.Th.A. Jansen, Mariano Andrés, Maureen Rischmueller, Linda A. Bradbury, Matthijs Janssen, Bain Shenstone, Lab Joosten, Andrew A. Harrison, Christopher Hill, Lisa K. Stamp, Thomas Bardin, Matthew A. Brown, Fernando Perez-Ruiz, S. Lester, G. Littlejohn, Humaira Rasheed, Kenneth M. Williams, Frédéric Lioté, Alexander So, Philip Riches, Ruth Topless, Anne-Kathrin Tausche, Diluk R W Kannangara, Edward Roddy, Graeme Jones, and Trdj Radstake
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Genetics ,medicine.medical_specialty ,Framingham Risk Score ,business.industry ,Immunology ,Arthritis ,Odds ratio ,medicine.disease ,General Biochemistry, Genetics and Molecular Biology ,Gout ,Rheumatology ,Internal medicine ,medicine ,Etiology ,Immunology and Allergy ,Hyperuricemia ,business ,Rheumatism ,Genetic association - Abstract
Background Gout results from innate immune response to monosodium urate (MSU) crystals that form when serum urate is elevated. Identification of genetic risk factors for hyperuricemia and the MSU immune response is therefore important for insight into the etiology of gout. Whilst genome-wide association studies have provided significant insights into the causes of hyperuricemia there are no confirmed loci for non-serum urate pathways in gout. Recently association of the rs2149356 variant in the TLR4 locus with gout was reported in a Chinese sample set (odds ratio TT genotype =1.88, P =8x10–5)1. TLR4 triggers innate immune response to endogenous ligands, including MSU crystals2. Objectives To test rs2149356 for association in European and New Zealand (NZ) Polynesian gout case-control sample sets. Methods All gout cases were clinically ascertained according to the American Rheumatism Association criteria. European cases (n=1606) were recruited from New Zealand (n=599), by the Eurogout consortium within the European Crystal Network (n=784) and by the Arthritis Genomics Recruitment Initiative in Australasia (AGRIA; n=223). European non-gouty controls (n=8066) were recruited from NZ (n=875) and sourced from the Atherosclerosis Risk in Communities (n=4144) and Framingham Heart (n=3047) studies. There were 872 New Zealand Maori and Pacific Island (Polynesian) cases and 1088 controls. Genotyping was done by Taqman and statistical analysis by STATA. Results Using unstratified controls the T allele, but not the TT genotype, was associated with gout in Europeans (ORTallele=1.09, P =0.05; ORTTgenotype=1.15, P =0.13). There was no evidence for association in Polynesians (ORTallele=0.90, P =0.12; ORTTgenotype=0.88, P =0.31). However, comparison of cases to hyperuricemic controls strengthened evidence for association with gout in Europeans (ORTallele=1.18, P =0.004; ORTTgenotype=1.38, P =0.017), but made no difference in Polynesians (ORTallele=, P =0.30; ORTTgenotype=0.87, P =0.47). ![Figure][1] Conclusions The previous report of association of TLR4 with gout in Chinese was replicated in Europeans but not Polynesians. Strengthening of association using hyperuricemic controls is consistent with a role for this locus in gouty inflammation in the presence of hyperuricemia. Subject to further replication, TLR4 represents the first non-serum urate genetic risk locus identified in gout, and provides support for a role of TLR4 in etiology. References 1. Qing et al. PLoS One 2013;5:e64845. 2. Liu-Bryan et al. Arthritis Rheum 2005;52:2936 Disclosure of Interest : None declared DOI 10.1136/annrheumdis-2014-eular.4781 [1]: pending:yes
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- 2014
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39. Discovery of Candidate Serum Proteomic and Metabolomic Biomarkers in Ankylosing Spondylitis
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David C. Trudgian, Roman Fischer, Paul Bowness, Gethin P. Thomas, Cynthia Wright, Benedikt M. Kessler, Linda A. Bradbury, and Matthew A. Brown
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Adult ,Male ,Proteomics ,Adolescent ,Vitamin D-binding protein ,Population ,Biochemistry ,Analytical Chemistry ,03 medical and health sciences ,0302 clinical medicine ,Vitamin D and neurology ,medicine ,Humans ,Metabolomics ,Spondylitis, Ankylosing ,education ,Molecular Biology ,Spondylitis ,Serum amyloid P component ,Aged ,030304 developmental biology ,030203 arthritis & rheumatology ,0303 health sciences ,Ankylosing spondylitis ,education.field_of_study ,biology ,Chemistry ,Research ,Blood Proteins ,Middle Aged ,medicine.disease ,Blood proteins ,3. Good health ,Case-Control Studies ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Immunology ,biology.protein ,Biomarker (medicine) ,Female ,Biomarkers ,Chromatography, Liquid - Abstract
Ankylosing Spondylitis (AS) is a common inflammatory rheumatic disease with a predilection for the axial skeleton, affecting 0.2% of the population. Current diagnostic criteria rely on a composite of clinical and radiological changes, with a mean time to diagnosis of 5 to 10 years. In this study we employed nano liquid-chromatography mass spectrometry analysis to detect and quantify proteins and small compounds including endogenous peptides and metabolites in serum from 18 AS patients and nine healthy individuals. We identified a total of 316 proteins in serum, of which 22 showed significant up- or down-regulation (p < 0.05) in AS patients. Receiver operating characteristic analysis of combined levels of serum amyloid P component and inter-α-trypsin inhibitor heavy chain 1 revealed high diagnostic value for Ankylosing Spondylitis (area under the curve = 0.98). We also depleted individual sera of proteins to analyze endogenous peptides and metabolic compounds. We detected more than 7000 molecular features in patients and healthy individuals. Quantitative MS analysis revealed compound profiles that correlate with the clinical assessment of disease activity. One molecular feature identified as a Vitamin D3 metabolite-(23S,25R)-25-hydroxyvitamin D3 26,23-peroxylactone-was down-regulated in AS. The ratio of this vitamin D metabolite versus vitamin D binding protein serum levels was also altered in AS as compared with controls. These changes may contribute to pathological skeletal changes in AS. Our study is the first example of an integration of proteomic and metabolomic techniques to find new biomarker candidates for the diagnosis of Ankylosing Spondylitis.
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- 2012
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40. Corrections
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B P Wordsworth, A. M. Sims, Markku J Kauppi, Kalevi Kaarela, K. Laiho, David Harvey, Jaakko Tuomilehto, Matthew A. Brown, Kay Chapman, J J Pointon, and Linda A. Bradbury
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medicine.medical_specialty ,Ankylosing spondylitis ,business.industry ,Immunology ,Haplotype ,Case-control study ,Odds ratio ,medicine.disease ,Rheumatology ,Internal medicine ,medicine ,Immunology and Allergy ,business ,Spondylitis ,Cohort study ,Genetic association - Abstract
Objective To investigate the association of CD14 and Toll-like receptor (TLR4) with ankylosing spondylitis (AS). Methods A promoter variant in CD14 and 2 coding polymorphisms in TLR4 were investigated in UK and Finnish families with AS and in a UK case-control study. A metaanalysis of published TLR4 and CD14 studies was performed. Results In the Finnish study the CD14-260bp T variant showed an association (p = 0.006), and the common 2-marker TLR4 haplotype showed a weak association (global p = 0.03), with AS. No associations were seen in the UK based studies or in the metaanalyses. Conclusion CD14 and TLR4 showed an association with AS in the Finns only.
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- 2009
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