159 results on '"Lo KY"'
Search Results
2. Anti-Ma2-associated paraneoplastic encephalitis eat, sleep and repeat
- Author
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Peters, J, Vijiaratnam, N, Lo, KY, Evans, AH, Peters, J, Vijiaratnam, N, Lo, KY, and Evans, AH
- Published
- 2019
3. Characteristics and outcomes of patients with percutaneous coronary intervention for unprotected left main coronary artery disease: a Hong Kong experience
- Author
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C K Chan and Lo Ky
- Subjects
Target lesion ,Male ,medicine.medical_specialty ,medicine.medical_treatment ,Left Main Coronary Artery Stenosis ,Coronary Artery Disease ,Coronary Angiography ,Coronary artery disease ,Percutaneous Coronary Intervention ,Restenosis ,Internal medicine ,Medicine ,Humans ,cardiovascular diseases ,Myocardial infarction ,Coronary Artery Bypass ,Stroke ,Aged ,Retrospective Studies ,business.industry ,Incidence (epidemiology) ,Percutaneous coronary intervention ,Drug-Eluting Stents ,General Medicine ,Middle Aged ,equipment and supplies ,medicine.disease ,Cardiology ,Female ,business - Abstract
OBJECTIVE To evaluate the intermediate-term outcomes of patients with unprotected left main coronary artery stenosis who were treated with percutaneous coronary intervention in Hong Kong. DESIGN Historical cohort. SETTING A regional hospital in Hong Kong. PATIENTS Patients with unprotected left main coronary artery disease undergoing stenting with bare-metal stents or drug-eluting stents between January 2008 and September 2011. MAIN OUTCOME MEASURES Incidence of restenosis and major adverse cardiac and cerebrovascular events including cardiac death, non-fatal myocardial infarction, stroke, and target lesion revascularisation. RESULTS Of the 111 patients included in the study, 86 received drug-eluting stents and 25 received bare-metal stents. Procedural success was achieved in 98.2% of cases. Angiographic follow-up was available in 83.8% of cases and restenosis rate was significantly lower with drug-eluting stents than with bare-metal stents (14.0% vs 40.0%; P=0.004). After a mean clinical follow-up of 26.1 (standard deviation, 12.6) months, the incidences of cardiac death (5.8% vs 16.0%; P=0.191) and non-fatal myocardial infarction (3.5% vs 8.0%; P=0.262) were similar between drug-eluting stents and bare-metal stents. However, the risks of target lesion revascularisation (9.3% vs 32.0%; P=0.001) and major adverse cardiac and cerebrovascular events (19.8% vs 44.0%; P=0.004) were significantly lower with drug-eluting stents than with bare-metal stents. CONCLUSIONS Performing percutaneous coronary intervention for unprotected left main coronary artery disease was safe and feasible in selected patients with high procedural success rate. The incidence of major adverse cardiac and cerebrovascular events in patients receiving drug-eluting stents remains low after intermediate-term follow-up. Compared with bare-metal stents, drug-eluting stents were associated with a lower need for repeating revascularisation without increasing the risk of death or myocardial infarction in patients with unprotected left main coronary artery disease.
- Published
- 2014
4. Incidence and Risk Factors of Glucocorticoid-Induced Diabetes Mellitus in Lymphoma Patients Treated with Glucocorticoid-Containing Chemotherapy
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Zhou, KR, primary, Chu, MH, additional, Lo, KY, additional, and Watanabe, JH, additional
- Published
- 2016
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5. A Study of the Deformation Characteristics of a Stiff Fissured Clay
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Lo, KY, primary, Seychuk, JL, additional, and Adams, JI, additional
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6. PCN11 - Incidence and Risk Factors of Glucocorticoid-Induced Diabetes Mellitus in Lymphoma Patients Treated with Glucocorticoid-Containing Chemotherapy
- Author
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Zhou, KR, Chu, MH, Lo, KY, and Watanabe, JH
- Published
- 2016
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7. A case of epigastric pain one day after normal vaginal delivery
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Lo, TK, primary, Chan, LL, additional, Lau, WL, additional, Wong, SH, additional, Wong, M, additional, Lo, KY, additional, and Leung, WC, additional
- Published
- 2012
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8. Successful treatment of IgA nephropathy in association with low-grade B- cell lymphoma of the mucosa-associated lymphoid tissue type
- Author
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Mak, SK, primary, Wong, PN, additional, Lo, KY, additional, and Wong, AK, additional
- Published
- 1998
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9. Measurements of Strength Parameters of Concrete-Rock Contact at the Dam-Foundation Interface
- Author
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Knodel, PC, primary, Lo, KY, additional, Ogawa, T, additional, Lukajic, B, additional, and Dupak, DD, additional
- Published
- 1991
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10. An exploratory study of the critical success factors of one-to-one Web-marketing: user perspectives.
- Author
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Luarn P, Chen IJ, and Lo KY
- Abstract
Dell provides personalized marketing services through the Internet (Fischer et al., 2000). This type of application of the Internet is referred to as One-to-One Web-marketing. Areview of the current literature relevant to information management and marketing revealed that, relative to other topics, research into this area is lacking. This study addresses this by exploring the Critical Success Factors (CSF) of Oneto-One Web-marketing from the user's perspective. It employed a triangulation method of integrating qualitative and quantitative designs in a three-stage research process. The research results revealed that there are five Critical Success Factors of One-to-One Web-marketing from the user perspectives: (1) the satisfaction of customer requirements, (2) the identification of customer differentiation, (3) the design of a quality user interface, (4) the establishment of customer recognition, and (5) the provision of customized services. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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11. Measurements of Strength Parameters of Concrete-Rock Contact at the Dam-Foundation Interface
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Lo, KY, Ogawa, T, Lukajic, B, and Dupak, DD
- Abstract
A long-term dam safety program has been initiated by Ontario Hydro to evaluate the safety of existing dams. Most of the dams in operation were constructed between 1910 and 1975. The larger dams are often of the concrete gravity type founded on rock.As an integral part of this program, laboratory methods for the measurement of the complete strength envelope of bonded concrete-rock contact and strength parameters of unbonded contact have been developed. The principal method and interpretation of each type of test are described in this paper. Typical results of tests on samples of dam-foundation interface recovered from existing dams are presented. The methods developed enable the determination of the strength envelope appropriate for the working stress level during operation of dams and the direct measurement of tensile strength and cohesion, thus removing the uncertainty of extrapolation for the cohesion component of strength in conventional triaxial and direct shear tests.
- Published
- 1991
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12. A New Apparatus for Measuring the Principal Strains in Anisotropic Clays
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Yuen, CMK, Lo, KY, Palmer, JHL, and Leonards, GA
- Abstract
An apparatus and an experimental arrangement were developed to provide an accurate measurement of the lateral deformation of soft sensitive clays. The apparatus contained light gage points and displacement transducers floated in a cell fluid in such a way that internal strains could be measured directly on the soil specimen with the least amount of disturbance. The performance data obtained from the testing of a soft sensitive clay indicated that the apparatus developed possessed adequate precision and stability for the study of the deformation behavior of clays.
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- 1978
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13. THE H-I DISTRIBUTION IN AN EXTREMELY FAINT DWARF IRREGULAR GALAXY M81-DWA
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SARGENT, WLW, SANCISI, R, and LO, KY
- Published
- 1983
14. Intrinsic size and shape of Sgr A*: 3.6 AU by < 1 AU
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Lo, Ky, Shen, Zq, Zhao, Jh, and paul ho
15. A survey of molecular gas content of galaxies at 0.08 < z < 1.06
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Lo, Ky, Chen, Hw, and paul ho
16. A New Apparatus for Measuring the Principal Strains in Anisotropic Clays
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Selig, ET, primary, Yuen, CMK, additional, Lo, KY, additional, Palmer, JHL, additional, and Leonards, GA, additional
- Published
- 1978
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17. Bisphosphonate therapy for persistent hyperparathyroidism after kidney transplantation-A case report.
- Author
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Sin HK, Lo KY, Lo MW, Chan SF, Lo KC, Wong YY, Ho LY, Kwok WT, Chan KC, Kwong JM, Mak SK, and Wong PN
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- Female, Humans, Bone Density Conservation Agents adverse effects, Bone Density Conservation Agents therapeutic use, Calcimimetic Agents adverse effects, Calcimimetic Agents therapeutic use, Diphosphonates adverse effects, Diphosphonates therapeutic use, Hyperparathyroidism etiology, Hyperparathyroidism drug therapy, Kidney Failure, Chronic surgery, Treatment Outcome, Cinacalcet therapeutic use, Kidney Transplantation adverse effects
- Abstract
Post-transplant hyperparathyroidism (PT-HPT) is common in kidney transplant recipients (KTRs) and can cause nephrocalcinosis and graft dysfunction. Cinacalcet is commonly used for treating PT-HPT but may induce calciuria and exacerbate nephrocalcinosis. The concurrent use of bisphosphonates with cinacalcet to prevent this complication has not been reported. We report a case of PT-HPT-associated graft dysfunction. The patient had ESRD due to IgAN. She had been on continuous ambulatory peritoneal dialysis (CAPD) for 7 years before undergoing kidney transplantation (KT). Pre-KT intact parathyroid hormone (iPTH) was 101 pmol/L, alkaline phosphatase (ALP) 205 IU/L, Ca 2.40 mmol/L and PO4 2.2 mmol/L. There was immediate graft function after KT and the existence of persistent hyperparathyroidism (Cr 72 μmol/L, eGFR > 60 mL/min/1.73 m
2 , Ca 2.85 mmol/L, PO4 0.6 mmol/L, ALP 315 IU/L, iPTH 16.4 pmol/L). Progressive renal impairment ensued over the next 10 months (Cr 146 μmol/L, eGFR 34 mL/min/1.73 m2 , Ca 2.77 mmol/L, PO4 0.9 mmol/L, ALP 142 IU/L, iPTH 24.4 pmol/L). Graft biopsy at 10 months post-KT revealed widespread tubular calcifications and no evidence of rejection. Intravenous pamidronate 60 mg was given quarterly for 3 doses in addition to cinacalcet therapy. ALP decreased from 147 to 81 IU/L despite refractory PT-HPT and renal function improved. Total parathyroidectomy was performed 1 month after the last pamidronate dose. Renal function remained stable for up to 4 years post-KT (Cr 151 μmol/L, eGFR 33 mL/min/1.73 m2 , Ca 2.19 mmol/L, PO4 1.3 mmol/L, ALP 70 IU/L, iPTH < 0.1 pmol/L). Our case report highlights the therapeutic potential of pamidronate in addition to cinacalcet in the management of PT-HPT-associated nephrocalcinosis., (© 2024 Asian Pacific Society of Nephrology.)- Published
- 2025
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18. Using microfluidic and conventional platforms to evaluate the effects of lanthanides on spheroid formation.
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Cheng YW, Hsieh YC, Sun YS, Wang YH, Yang YW, and Lo KY
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- Humans, Cell Culture Techniques methods, Cell Line, Tumor, Antineoplastic Agents pharmacology, Antineoplastic Agents toxicity, Microfluidic Analytical Techniques instrumentation, Microfluidic Analytical Techniques methods, Cell Survival drug effects, Cell Culture Techniques, Three Dimensional methods, Drug Screening Assays, Antitumor methods, Spheroids, Cellular drug effects, Lanthanoid Series Elements toxicity, Lanthanoid Series Elements pharmacology
- Abstract
Metastasis contributes to the increased mortality rate of cancer, but the intricate mechanisms remain unclear. Cancer cells from a primary tumor invade nearby tissues and access the lymphatic or circulatory system. If these cells manage to survive and extravasate from the vasculature into distant tissues and ultimately adapt to survive, they will proliferate and facilitate malignant tumor formation. Traditional two-dimensional (2D) cell cultures offer a rapid and convenient method for validating the efficacy of anticancer drugs within a reasonable cost range, but their utility is limited because of tumors' high heterogeneity in vivo and spatial complexities. Three-dimensional (3D) cell cultures that mimic the physiological conditions of cancer cells in vivo have gained considerable interest. In these cultures, cells assemble into spheroids through gravity, magnetic forces, or their low-adhesion to the plates. Although these approaches address some of the limitations of 2D cultures, they often require a considerable amount of time and cost. Therefore, this study aims to enhance the effectiveness of 3D culture techniques by using microfluidic systems to provide a high-throughput and sensitive pipeline for drug screening. Using these systems, we studied the effects of lanthanide elements, which have garnered interest in cancer treatment, on spheroid formation and cell spreading. Our findings suggest that these elements alter the compactness of cell spheroids and decrease cell mobility., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Kai-Yin Lo reports financial support was provided by National Science and Technology Council of Taiwan. Kai-Yin Lo reports financial support was provided by National Taiwan University Hospital. Ya-Wen Yang reports financial support was provided by National Taiwan University Hospital. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
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19. The Association between Organizational Factors of Health Promoting Schools and Teachers' Health Lifestyles: A Multilevel Analysis.
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Luh DL, Huang HL, Chiou SY, Lo KY, and Chen FL
- Abstract
Background: Schools are both learning environments for students and workplaces for faculty. Recognizing the role of organizational factors in staff health in school environments, the study aimed to explore which factors, including transformational leadership, teachers' perceived management support and HPS accreditation awards, were most associated with promoting a healthy lifestyle for teachers., Methods: A cross-sectional study was undertaken of 137 elementary schools in 2014, involving 433 directors and 2090 teachers. Data were collected using an anonymous structured questionnaire. Hierarchical linear modeling was used to analyze both teacher- and school-level factors associated with health-promoting lifestyles., Results: There was a significant positive correlation between teachers' overall health-promoting lifestyle profile (HPLP-II) scores and both perceived management support (coefficient = .98, p < .001) and transformational leadership (coefficient = .38, p = .039). All 6 HPLP-II subscales also showed significant positive correlations with perceived management support (coefficients .12-.24, p < .001)., Conclusion: Supporting a healthy working atmosphere and strong principal transformational leadership are keys to enhancing teachers' health-promoting lifestyles. Future research could explore how transformational leadership and management support influence teachers' health behaviors and identify effective strategies and interventions., (© 2024 American School Health Association.)
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- 2024
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20. Dual protection by Bcp1 and Rkm1 ensures incorporation of uL14 into pre-60S ribosomal subunits.
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Yeh MC, Hsu NH, Chu HY, Yang CH, Hsu PH, Chou CC, Shie JT, Lee WM, Ho MC, and Lo KY
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- Molecular Chaperones metabolism, Molecular Chaperones genetics, Protein Binding, Molecular Docking Simulation, Cryoelectron Microscopy, Cell Nucleus metabolism, Cell Nucleus genetics, Saccharomyces cerevisiae Proteins metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae genetics, Ribosome Subunits, Large, Eukaryotic metabolism, Ribosome Subunits, Large, Eukaryotic genetics, Ribosomal Proteins metabolism, Ribosomal Proteins genetics
- Abstract
Eukaryotic ribosomal proteins contain extended regions essential for translation coordination. Dedicated chaperones stabilize the associated ribosomal proteins. We identified Bcp1 as the chaperone of uL14 in Saccharomyces cerevisiae. Rkm1, the lysine methyltransferase of uL14, forms a ternary complex with Bcp1 and uL14 to protect uL14. Rkm1 is transported with uL14 by importins to the nucleus, and Bcp1 disassembles Rkm1 and importin from uL14 simultaneously in a RanGTP-independent manner. Molecular docking, guided by crosslinking mass spectrometry and validated by a low-resolution cryo-EM map, reveals the correlation between Bcp1, Rkm1, and uL14, demonstrating the protection model. In addition, the ternary complex also serves as a surveillance point, whereas incorrect uL14 is retained on Rkm1 and prevented from loading to the pre-60S ribosomal subunits. This study reveals the molecular mechanism of how uL14 is protected and quality checked by serial steps to ensure its safe delivery from the cytoplasm until its incorporation into the 60S ribosomal subunit., (© 2024 Yeh et al.)
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- 2024
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21. Do abnormal screening results for chronic diseases motivate inactive people to start exercising? A community-based prospective cohort study in Changhua, Taiwan.
- Author
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Hsu HF, Lo KY, Yeh YP, Chen TH, and Luh DL
- Subjects
- Humans, Prospective Studies, Taiwan, Blood Pressure physiology, Chronic Disease, Sedentary Behavior
- Abstract
Objective: Exercise improves health, but illnesses can cause changes in exercise behavior, including starting or stopping. This study investigated the effects of chronic disease screening on inactive individuals' exercise behavior and analyzed the impact of age and chronic disease history on this relationship using stratified analysis., Methods: Using a community-based prospective observational cohort design and data from the Changhua Community-Based Integrated Screening (CHCIS) dataset from 2005 to 2020, we examined 12,038 people who were screened at least twice and self-reported having never exercised at their first screening. Changes in exercise behavior were classified as "initiating exercise" and "remaining inactive." We obtained chronic disease screening results from CHCIS records, which included measurements of waist circumference, blood glucose, blood pressure, triglycerides, and high-density lipoproteins. SAS version 9.4 was used for COX proportional hazards regression., Results: The findings indicated that abnormal waist circumference and blood pressure increased the likelihood of initiating exercise compared to normal results. Age stratification showed that those aged 40-49 with abnormal results were more likely to start exercising than normal participants, but not those under 40 or over 65. When stratified by chronic disease history, abnormal screening results correlated with exercise initiation only in groups without chronic disease history, except for those with a history of hyperlipidemia., Conclusions: This is the first study to demonstrate that abnormal screening results may influence exercise initiation in individuals who have never exercised, and this association varies by screening item, age, and disease history., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier Inc.)
- Published
- 2024
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22. Exploring the multifaceted impact of lanthanides on physiological pathways in human breast cancer cells.
- Author
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Huang YM, Hsu TY, Liu CY, Hsieh YC, Lai KY, Yang YW, and Lo KY
- Subjects
- Humans, Phosphatidylinositol 3-Kinases metabolism, Calcium, Cisplatin, Lanthanum toxicity, Cell Line, Tumor, Lanthanoid Series Elements, Triple Negative Breast Neoplasms metabolism
- Abstract
Lanthanum (La) and cerium (Ce), rare earth elements with physical properties similar to calcium (Ca), are generally considered non-toxic when used appropriately. However, their ions possess anti-tumor capabilities. This investigation explores the potential applications and mechanisms of LaCl
3 or CeCl3 treatment in triple-negative breast cancer (TNBC) cell lines. TNBC, characterized by the absence of estrogen receptor (ERα), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER-2) expression, is prone to early metastasis and resistant to hormone therapy. Our results demonstrate that La/Ce treatment reduces cell growth, and when combined with cisplatin, it synergistically inhibits cell growth and the PI3K/AKT pathway. La and Ce induce oxidative stress by disrupting mitochondrial function, leading to protein oxidation. Additionally, they interfere with protein homeostasis and induce nucleolar stress. Furthermore, disturbance in F-actin web formation impairs cell migration. This study delves into the mechanism by which calcium-like elements La and Ce inhibit breast cancer cell growth, shedding light on their interference in mitochondrial function, protein homeostasis, and cytoskeleton assembly., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
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23. Mutations of ribosomal protein genes induce overexpression of catalase in Saccharomyces cerevisiae.
- Author
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Hsu CH, Liu CY, and Lo KY
- Subjects
- Catalase genetics, Ribosomal Proteins genetics, Ribosomal Proteins metabolism, Hydrogen Peroxide pharmacology, Oxidative Stress, Superoxide Dismutase-1 metabolism, Mutation, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Ribosome assembly defects result in ribosomopathies, primarily caused by inadequate protein synthesis and induced oxidative stress. This study aimed to investigate the link between deleting one ribosomal protein gene (RPG) paralog and oxidative stress response. Our results indicated that RPG mutants exhibited higher oxidant sensitivity than the wild type (WT). The concentrations of H2O2 were increased in the RPG mutants. Catalase and superoxide dismutase (SOD) activities were generally higher at the stationary phase, with catalase showing particularly elevated activity in the RPG mutants. While both catalase genes, CTT1 and CTA1, consistently exhibited higher transcription in RPG mutants, Ctt1 primarily contributed to the increased catalase activity. Stress-response transcription factors Msn2, Msn4, and Hog1 played a role in regulating these processes. Previous studies have demonstrated that H2O2 can cleave 25S rRNA via the Fenton reaction, enhancing ribosomes' ability to translate mRNAs associated with oxidative stress-related genes. The cleavage of 25S rRNA was consistently more pronounced, and the translation efficiency of CTT1 and CTA1 mRNAs was altered in RPG mutants. Our results provide evidence that the mutations in RPGs increase H2O2 levels in vivo and elevate catalase expression through both transcriptional and translational controls., (© The Author(s) 2024. Published by Oxford University Press on behalf of FEMS.)
- Published
- 2024
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24. Gallium maltolate shows synergism with cisplatin and activates nucleolar stress and ferroptosis in human breast carcinoma cells.
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Chen CH, Huang YM, Grillet L, Hsieh YC, Yang YW, and Lo KY
- Subjects
- Humans, Female, Cisplatin pharmacology, Cisplatin therapeutic use, Cell Line, Tumor, Apoptosis, Cell Proliferation, Antineoplastic Agents pharmacology, Antineoplastic Agents therapeutic use, Ferroptosis, Triple Negative Breast Neoplasms metabolism
- Abstract
Purpose: Breast cancer is the most common cancer in women. Triple-negative breast cancer (TNBC) is an aggressive disease with poor outcomes. TNBC lacks effective targeted treatments, and the development of drug resistance limits the effectiveness of chemotherapy. It is crucial to identify new drugs that can enhance the efficacy of traditional chemotherapy to reduce drug resistance and side effects., Methods: TNBC cell lines, MDA-MB-231 and Hs 578T, and a normal cell line, MCF-10 A, were included in this study. The cells were treated with gallium maltolate (GaM), and their transcriptome was analyzed. Ferroptosis and nucleolar stress markers were detected by qPCR, western blotting, fluorescence microscopy, and flow cytometry. The impairment of ribosome synthesis was evaluated by northern blotting and sucrose gradients., Results: GaM triggered cell death via apoptosis and ferroptosis. In addition, GaM impaired translation and activated nucleolar stress. Cisplatin (DDP) is a chemotherapeutic agent for advanced breast cancer. While single treatment with GaM or DDP at low concentrations did not impact cell growth, co-administration enhanced cell death in TNBC but not in normal breast cells. The enhancement of ferroptosis and nucleolar stress could be observed in TNBC cell lines after co-treatment., Conclusions: These results suggest that GaM synergizes with cisplatin via activation of nucleolar stress and ferroptosis in human breast carcinoma cells. GaM is marginally toxic to normal cells but impairs the growth of TNBC cell lines. Thus, GaM has the potential to be used as a therapeutic agent against TNBC., (© 2023. Springer Nature Switzerland AG.)
- Published
- 2023
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25. Evaluation of the relationship between cardiac calcification and cardiovascular disease using the echocardiographic calcium score in patients undergoing peritoneal dialysis: a cross-sectional study.
- Author
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Sin HK, Wong PN, Lo KY, Lo MW, Chan SF, Lo KC, Wong YY, Ho LY, Kwok WT, Chan KC, Wong AK, and Mak SK
- Subjects
- Humans, Cross-Sectional Studies, Calcium, Echocardiography, Cardiovascular Diseases complications, Cardiovascular Diseases diagnostic imaging, Peritoneal Dialysis adverse effects, Vascular Calcification diagnostic imaging, Vascular Calcification epidemiology
- Abstract
Introduction: An echocardiographic calcium score (ECS) predicts cardiovascular disease (CVD) in the general population. Its utility in peritoneal dialysis (PD) patients is unknown., Methods: This cross-sectional study assessed 125 patients on PD. The ECS (range 0-8) was compared between subjects with CVD and those without., Results: Among the subjects, 54 had CVD and 71 did not. Subjects with CVD were older (69 years vs. 56 years, P < 0.001) and had a higher prevalence of diabetes mellitus (DM) (81.5% vs. 45.1%, P < 0.001). They had lower diastolic blood pressure (72 mmHg vs. 81 mmHg, P < 0.001), lower phosphate (1.6 mmol/L vs. 1.9 mmol/L, P = 0.002), albumin (30 g/L vs. 32 g/L, P = 0.001), parathyroid hormone (34.4 pmol/L vs. 55.8 pmol/L, P = 0.002), total cholesterol (4.5 vs. 4.9, P = 0.047), LDL cholesterol (2.4 mmol/L vs. 2.8 mmol/L, P = 0.019) and HDL cholesterol (0.8 mmol/L vs. 1.1 mmol/L, P = 0.002). The ECS was found to be higher in subjects with CVD than in those without (2 vs. 1, P = 0.001). On multivariate analysis, only DM and age were independently associated with CVD., Conclusion: The ECS was significantly higher in PD patients with CVD than in those without, reflecting a higher vascular calcification burden in the former. It is a potentially useful tool to quantify vascular calcification in PD patients., Competing Interests: None
- Published
- 2023
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26. Second harmonic generation and simplified bond hyperpolarizability model analyses on the intermixing of Si/SiGe stacked multilayers for gate-all-around structure.
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Chen WT, Yen TY, Hung YH, Huang YH, Chiu SJ, and Lo KY
- Abstract
Si/SiGe stacked multilayers are key elements in fabrication of gate-all-around (GAA) structures and improvement of electrical properties, with the evolution of the Si/SiGe interfaces playing a crucial role. In this work, a model is developed based on the simplified bond hyperpolarizability model (SBHM) to analysis the anisotropic reflective second harmonic generation (Ani-RSHG) on a three-period stacked Si/Si
1- x Gex multilayer, which builds on Si(100) diamond structures. The C4v symmetry of the Si(100) structure enables the second harmonic generation (SHG) contribution from the bonds to be simplified and the effective hyperpolarizabilities of the interfacial and bulk sources to be obtained. The effective interface dipolar and bulk quadrupolar SHG hyperpolarizabilities in the Si1- x Gex sample with various Ge concentration profiles are modeled by interpreting the concentration of a component element as the probability of the element occupying an atomic site. On the basis of the developed model, the Ani-RSHG spectra of the as-grown samples with various Ge ratios for each layer and the samples annealed at 850 °C and 950 °C are analyzed to inspect the change in Ge distribution and its gradient in depth. The ani-RSHG analysis on as-grown samples showed difference in Ge distribution in samples with the multi Si/SiGe structure, which is not well observed in synchrotron x-ray diffraction (XRD) spectra. For the annealed samples, the response to changes in Ge concentration and its gradient in depth reveal the Si/Si1- x Gex interface intermixing. Results of high-angle annular dark-field scanning transmission electron microscopy and energy dispersive x-ray spectroscopy agree well with the Ani-RSHG with SBHM findings. Compared with the Raman and synchrotron XRD spectra, the Ani-RSHG with SBHM simulation result demonstrates much better response to changes in compositions of the Si/Si1- x Gex stacked multilayered structures, verifying the potential for characterizing the concentration distribution in stacked multilayered thin films for GAA structures., (© 2023 IOP Publishing Ltd.)- Published
- 2023
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27. Functional Characterization and Structural Modeling of a Novel Glycine Oxidase from Variovorax paradoxus Iso1.
- Author
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Lo KY, Tsai YF, Hsu CH, and Lee CY
- Subjects
- Amidohydrolases genetics, Comamonadaceae, Substrate Specificity, Escherichia coli metabolism, Amino Acids, Alanine, Sarcosine, Flavin-Adenine Dinucleotide metabolism
- Abstract
The N -acyl-d-amino acid amidohydrolase ( N -d-AAase) of Variovorax paradoxus Iso1 can enantioselectively catalyze the zinc-assisted deacetylation of N -acyl-d-amino acids to yield consistent d-amino acids. A putative FAD-binding glycine/d-amino acid oxidase was located immediately upstream of the N-d-AAase gene. The gene encoding this protein was cloned into Escherichia coli BL21 (DE3)pLysS and overexpressed at 25°C for 6 h with 0.5 mM isopropyl β-d-1-thiogalactopyranoside induction. After purification, the tag-free recombinant protein was obtained. The enzyme could metabolize glycine, sarcosine, and d-alanine, but not l-amino acids or bulky d-amino acids. Protein modeling further supported these results, demonstrating that glycine, sarcosine, and d-alanine could fit into the pocket of the enzyme's activation site, while l-alanine and d-threonine were out of position. Therefore, this protein was proposed as a glycine oxidase, and we designated it VpGO. Interestingly, VpGO showed low sequence similarity to other well-characterized glycine oxidases. We found that VpGO and N -d-AAase were expressed on the same mRNA and could be transcriptionally induced by various N-acetyl-d-amino acids. Western blotting and zymography showed that both proteins had similar expression patterns in response to different types of inducers. Thus, we have identified a novel glycine oxidase that is co-regulated with N -d-AAase in an operon, and metabolizes N -acyl-d-amino acids in the metabolically versatile V. paradoxus Iso1. IMPORTANCE The Gram-negative bacterium Variovorax paradoxus has numerous metabolic capabilities, including the association with important catabolic processes and the promotion of plant growth. We had previously identified and characterized an N -acyl-d-amino-acid amidohydrolase ( N -d-AAase) gene from the strain of V. paradoxus Iso1. The aim of this study was to isolate and characterize (both in vitro and in vivo ) another potential gene found in the promoter region of this N -d-AAase gene. The protein was identified as a glycine oxidase, and the gene existed in an operon with N -d-AAase. The structural basis for its FAD-binding potential and substrate stereo-specificity were also elucidated. This study first reported a novel glycine oxidase from V. paradoxus. We believe that our study makes a significant contribution to the literature, because this enzyme has great potential for use as an industrial catalysis, as a biosensor, and in agricultural biotechnology.
- Published
- 2022
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28. Structure of an In Situ Phosphorus-Doped Silicon Ultrathin Film Analyzed Using Second Harmonic Generation and Simplified Bond-Hyperpolarizability Model.
- Author
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Chen WT, Yen TY, Hung YH, and Lo KY
- Abstract
In fabricating advanced silicon (Si)-based metal-oxide semiconductors, the ability to inspect dopant distribution in Si ultrathin films (tens of nm) is crucial for monitoring the amount of dopant diffusion. Here, we perform an anisotropic reflective second harmonic generation (SHG) measurement to demonstrate the sensitivity of SHG to phosphorus (P) concentration within the range of 2.5×1017 to 1.6×1020 atoms/cm
3 . In addition, we propose an analysis method based on a simplified bond-hyperpolarizability model to interpret the results. The bond vector model that corresponds to the P vacancy clusters is built to calculate the SHG contribution from substitutionally incorporated P atoms. The effect of incorporating P into the Si lattice is reflected in the effective hyperpolarizability, lattice tilt, and deformation of this model. The fitting results of the intuitively defined coefficients exhibit a high correlation to the P concentration, indicating the potential of this model to resolve the properties in complex material compositions. Finally, a comparison with Fourier analysis is made to evaluate the advantages and disadvantages of this model. Combined anisotropic reflective SHG (Ani-RSHG) and the simplified bond-hyperpolarizability model (SBHM) can analyze the crystal structure of doped ultrathin films and provide a non-destructive nanophotonic way for in-line inspection.- Published
- 2022
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29. Translation initiation factor eIF4G1 modulates assembly of the polypeptide exit tunnel region in yeast ribosome biogenesis.
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Tseng YT, Sung YC, Liu CY, and Lo KY
- Subjects
- Eukaryotic Initiation Factor-4G analysis, Eukaryotic Initiation Factor-4G genetics, Eukaryotic Initiation Factor-4G metabolism, GTP Phosphohydrolases metabolism, Humans, Models, Molecular, Peptides metabolism, Ribosomal Proteins genetics, Ribosome Subunits, Large, Eukaryotic metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
eIF4G is an important eukaryotic translation initiation factor. In this study, eIF4G1, one of the eIF4G isoforms, was shown to directly participate in biogenesis of the large (60S) ribosomal subunit in Saccharomyces cerevisiae cells. Mutation of eIF4G1 decreased the amount 60S ribosomal subunits significantly. The C-terminal fragment of eIF4G1 could complement the function in 60S biogenesis. Analyses of its purified complex with mass spectrometry indicated that eIF4G1 associated with the pre-60S form directly. Strong genetic and direct protein-protein interactions were observed between eIF4G1 and Ssf1 protein. Upon deletion of eIF4G1, Ssf1, Rrp15, Rrp14 and Mak16 were abnormally retained on the pre-60S complex. This purturbed the loading of Arx1 and eL31 at the polypeptide exit tunnel (PET) site and the transition to a Nog2 complex. Our data indicate that eIF4G1 is important in facilitating PET maturation and 27S processing correctly. This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2022. Published by The Company of Biologists Ltd.)
- Published
- 2022
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30. Sexual Crossing, Chromosome-Level Genome Sequences, and Comparative Genomic Analyses for the Medicinal Mushroom Taiwanofungus Camphoratus (Syn. Antrodia Cinnamomea , Antrodia Camphorata) .
- Author
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Chen CL, Li WC, Chuang YC, Liu HC, Huang CH, Lo KY, Chen CY, Chang FM, Chang GA, Lin YL, Yang WD, Su CH, Yeh TM, and Wang TF
- Subjects
- Agaricales, Basidiomycota, Fruiting Bodies, Fungal genetics, Humans, Mycelium, Secondary Metabolism genetics, Sequence Analysis, DNA, Transcriptome, Chromosomes, Genomics, Polyporales genetics, Polyporales metabolism, Whole Genome Sequencing
- Abstract
Taiwanofungus camphoratus mushrooms are a complementary and alternative medicine for hangovers, cancer, hypertension, obesity, diabetes, and inflammation. Though Taiwanofungus camphoratus has attracted considerable biotechnological and pharmacological attention, neither classical genetic nor genomic approaches have been properly established for it. We isolated four sexually competent monokaryons from two T. camphoratus dikaryons used for the commercial cultivation of orange-red (HC1) and milky-white (SN1) mushrooms, respectively. We also sequenced, annotated, and comparatively analyzed high-quality and chromosome-level genome sequences of these four monokaryons. These genomic resources represent a valuable basis for understanding the biology, evolution, and secondary metabolite biosynthesis of this economically important mushrooms. We demonstrate that T. camphoratus has a tetrapolar mating system and that HC1 and SN1 represent two intraspecies isolates displaying karyotypic variation. Compared with several edible mushroom model organisms, T. camphoratus underwent a significant contraction in the gene family and individual gene numbers, most notably for plant, fungal, and bacterial cell-wall-degrading enzymes, explaining why T. camphoratus mushrooms are rare in natural environments, are difficult and time-consuming to artificially cultivate, and are susceptible to fungal and bacterial infections. Our results lay the foundation for an in-depth T. camphoratus study, including precise genetic manipulation, improvements to mushroom fruiting, and synthetic biology applications for producing natural medicinal products. IMPORTANCE Taiwanofungus camphoratus (Tc) is a basidiomycete fungus that causes brown heart rot of the aromatic tree Cinnamomum kanehirae. The Tc fruiting bodies have been used to treat hangovers, abdominal pain, diarrhea, hypertension, and other diseases first by aboriginal Taiwanese and later by people in many countries. To establish classical genetic and genomic approaches for this economically important medicinal mushroom, we first isolated and characterized four sexually competent monokaryons from two dikaryons wildly used for commercial production of Tc mushrooms. We applied PacBio single molecule, real-time sequencing technology to determine the near-completed genome sequences of four monokaryons. These telomere-to-telomere and gapless haploid genome sequences reveal all genomic variants needed to be studied and discovered, including centromeres, telomeres, retrotransposons, mating type loci, biosynthetic, and metabolic gene clusters. Substantial interspecies diversities are also discovered between Tc and several other mushroom model organisms, including Agrocybe aegerita, Coprinopsis cinerea, and Schizophyllum commune, and Ganoderma lucidum.
- Published
- 2022
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31. An echocardiography-derived calcium score as a predictor of major adverse cardiovascular events in peritoneal dialysis patients-A prospective cohort study.
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Sin HK, Wong PN, Lo KY, Lo MW, Chan SF, Lo KC, Wong YY, Ho LY, Kwok WT, Chan KC, Wong AK, and Mak SK
- Subjects
- Aged, Cohort Studies, Female, Humans, Male, Middle Aged, Predictive Value of Tests, Prospective Studies, Calcium analysis, Cardiovascular Diseases diagnostic imaging, Echocardiography, Peritoneal Dialysis
- Abstract
Background: An echocardiography-derived calcium score (ECS) has been shown to predict cardiovascular (CV) mortality in the general population but has not been utilized in the dialysis population., Methods: We conducted a prospective cohort study including 125 prevalent PD patients. Two blinded and independent echocardiographers determined the ECS for each subject at baseline. The primary outcome was the three-point major adverse cardiovascular events (MACE) which is a composite outcome comprising CV death, non-fatal myocardial infarction and non-fatal stroke. The secondary outcome was all-cause mortality., Results: The mean age was 61 ± 13 years. The median follow-up duration was 40 months (range 1-50). Seventy six (60.8%) of the subjects had diabetes mellitus (DM). The median duration of dialysis was 32 (IQR 16-54) months. The incidences of MACE and all-cause mortality were 13.0 per 100 patient-years and 18.3 per 100 patient-years. Multivariate Cox regression analysis identified the following three independent predictors of MACE: ECS (HR 1.253/unit increase in ECS, 95% CI 1.014-1.547, p = .036), DM (HR 2.467, 95% CI 1.014-6.005, p = .047) and pre-existing cardiovascular disease (CVD) (HR 2.441, 95% CI 1.261-4.728, p = .008); and the following two predictors of all-cause mortality: pre-existing CVD (HR 2.156, 95% CI 1.251-3.714, p = .006) and serum albumin (HR 0.887/g/L increase in serum albumin, 95% CI 0.839-0.937, p < .001)., Conclusion: The ECS appears to be a significant predictor of MACE in PD patients independently of DM and pre-existing CVD., (© 2021 Asian Pacific Society of Nephrology.)
- Published
- 2022
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32. The dedicated chaperones of eL43, Puf6 and Loc1 can also bind RPL43 mRNA and regulate the production of this ribosomal protein.
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Yueh LY, Tseng YT, Chu CY, and Lo KY
- Subjects
- Nuclear Proteins metabolism, RNA, Messenger genetics, RNA-Binding Proteins genetics, Saccharomyces cerevisiae metabolism, Ribosomal Proteins genetics, Ribosomal Proteins metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
The level of ribosome biogenesis is highly associated with cell growth rate. Because many ribosomal proteins have extraribosomal functions, overexpression or insufficient supply of these proteins may impair cellular growth. Therefore, the supply of ribosomal proteins is tightly controlled in response to rRNA syntheses and environmental stimuli. In our previous study, two RNA-binding proteins, Puf6 and Loc1, were identified as dedicated chaperones of the ribosomal protein eL43, with which they associate to maintain its protein level and proper loading. In this study, we demonstrate that Puf6 and Loc1 interact with RPL43 mRNA. Notably, Puf6 and Loc1 usually function as a dimeric complex to bind other mRNAs; however, in this instance, the individual proteins, but not the complex form, can bind RPL43 mRNA. Thus, Puf6 or Loc1 could bind RPL43 mRNA in loc1Δ or puf6Δ, respectively. The binding of Puf6 or Loc1 caused negative effects for eL43 production: decreased RNA stability and translation of RPL43A/B mRNA. The present results suggest that these dedicated chaperones control the protein levels of eL43 from the standpoint of stability and through regulating its production., (© The Author(s) 2021. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.)
- Published
- 2022
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33. High-dose copper activates p53-independent apoptosis through the induction of nucleolar stress in human cell lines.
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Chen CH, Chou YT, Yang YW, and Lo KY
- Subjects
- Apoptosis, Cell Line, Humans, Nucleophosmin, Copper toxicity, Tumor Suppressor Protein p53 genetics
- Abstract
Copper is an essential micronutrient involved in many redox reactions in human cells. However, a high concentration of copper, intake from the environment or abnormal accumulation within cells because of genetic mutation, leads to cell toxicity. This is attributable to oxidative damage, altered gene expression, and functional impairment of the mitochondria. Copper stress also alters the morphology of the nucleolus, but the process has not been fully elucidated. In this study, cells were treated with copper sulfate at 3-9 ppm and examined if a high dose of copper would block ribosome biogenesis. With the incorrect distribution of nucleolar proteins nucleophosmin and fibrillarin to the nucleoplasm, ribosomal RNA (rRNA) processing was impaired; 34S rRNA from an abnormal A2 cut increased, and downstream pre-rRNAs decreased. The under-accumulation of 60S subunits was detected using sucrose gradients. From transcriptome analysis, ribosome synthesis-related genes were misregulated. Blockage in ribosome synthesis under copper-treatment induced nucleolar stress and triggered p53-independent apoptosis pathways. Thus, nucleolar stress is one cause of cell death under copper exposure., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2021
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34. Elp1 facilitates RAD51-mediated homologous recombination repair via translational regulation.
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Chen WT, Tseng HY, Jiang CL, Lee CY, Chi P, Chen LY, Lo KY, Wang IC, and Lin FJ
- Subjects
- Animals, Fibroblasts, Genomic Instability, Intracellular Signaling Peptides and Proteins metabolism, Mice, Rad51 Recombinase metabolism, Chromosome Breakage, DNA Damage genetics, Intracellular Signaling Peptides and Proteins genetics, Protein Biosynthesis genetics, Rad51 Recombinase genetics, Recombinational DNA Repair genetics
- Abstract
Background: RAD51-dependent homologous recombination (HR) is one of the most important pathways for repairing DNA double-strand breaks (DSBs), and its regulation is crucial to maintain genome integrity. Elp1 gene encodes IKAP/ELP1, a core subunit of the Elongator complex, which has been implicated in translational regulation. However, how ELP1 contributes to genome maintenance is unclear., Methods: To investigate the function of Elp1, Elp1-deficient mouse embryonic fibroblasts (MEFs) were generated. Metaphase chromosome spreading, immunofluorescence, and comet assays were used to access chromosome abnormalities and DSB formation. Functional roles of Elp1 in MEFs were evaluated by cell viability, colony forming capacity, and apoptosis assays. HR-dependent DNA repair was assessed by reporter assay, immunofluorescence, and western blot. Polysome profiling was used to evaluate translational efficiency. Differentially expressed proteins and signaling pathways were identified using a label-free liquid chromatography-tandem mass spectrometry (LC-MS/MS) proteomics approach., Results: Here, we report that Elp1 depletion enhanced genomic instability, manifested as chromosome breakage and genotoxic stress-induced genomic DNA fragmentation upon ionizing radiation (IR) exposure. Elp1-deficient cells were hypersensitive to DNA damage and exhibited impaired cell proliferation and defective HR repair. Moreover, Elp1 depletion reduced the formation of IR-induced RAD51 foci and decreased RAD51 protein levels. Polysome profiling analysis revealed that ELP1 regulated RAD51 expression by promoting its translation in response to DNA damage. Notably, the requirement for ELP1 in DSB repair could be partially rescued in Elp1-deficient cells by reintroducing RAD51, suggesting that Elp1-mediated HR-directed repair of DSBs is RAD51-dependent. Finally, using proteome analyses, we identified several proteins involved in cancer pathways and DNA damage responses as being differentially expressed upon Elp1 depletion., Conclusions: Our study uncovered a molecular mechanism underlying Elp1-mediated regulation of HR activity and provides a novel link between translational regulation and genome stability., (© 2021. The Author(s).)
- Published
- 2021
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35. Effects of health-promoting school strategy on dental plaque control and preventive behaviors in schoolchildren in high-caries, rural areas of Taiwan: a quasi-experimental design.
- Author
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Wei CT, Lo KY, Lin YC, Hu CY, Chen FL, and Huang HL
- Subjects
- Child, Dental Caries Susceptibility, Humans, Research Design, Schools, Taiwan, Dental Caries, Dental Plaque prevention & control
- Abstract
Background: We evaluated the effects of health-promoting school (HPS) strategy on plaque control and behavior change in high-caries schoolchildren in Taitung, Taiwan., Methods: A quasi-experimental design was adopted; six intervention schools (intervention group [IG]) and six comparison schools (comparison group [CG]) were selected from elementary schools with higher-than-average caries rates (> 68%). The IG was selected using cluster sampling, and the CG was selected to match the IG. In total, the IG and CG groups included 166 and 174 children each. The selected schools implemented the HPS framework for 3 months in the 2019 academic year. An oral examination of dental plaque was administered, and a self-administered questionnaire regarding knowledge, attitude, self-efficacy, and behaviors was distributed at baseline and at 2-week follow-up. A linear and logistic regression model using generalized estimating equations (GEEs) was used to analyze the differences between baseline and the follow-up data., Results: Compared with the CG, the IG had a greater reduction in plaque index among second graders (β = - 0.36) and plaque control record scores among second, fourth, and sixth graders (β = - 27.48, - 26.04, and - 18.38, respectively). The IG also exhibited a greater increase at follow-up with respect to oral health-related knowledge among second graders and fourth graders (β = 1.46 and β = 0.92, respectively), attitude toward oral hygiene behaviors among sixth graders (β = 1.78), and self-efficacy regarding flossing for sixth graders (β = 1.43). Sixth graders in the IG were significantly more likely to brush before sleeping (adjusted odds ratio [aOR] = 2.99) and use fluoride toothpaste (aOR = 5.88) than those in the CG., Conclusions: The HPS strategy was effective in reducing dental plaque and promoting preventing behaviors in rural high-caries schoolchildren., (© 2021. The Author(s).)
- Published
- 2021
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36. Antimicrobial and Anticorrosion Activity of a Novel Composite Biocide against Mixed Bacterial Strains in Taiwanese Marine Environments.
- Author
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Chang SY, Huang SY, Chu YR, Jian SY, Lo KY, and Lee YL
- Abstract
Taiwan is an island with a humid subtropical climate. The relatively warm seawater results in biofouling of the surfaces of marine facilities. Biocide application is a common practice for combating and eliminating adhesive fouling. However, a single type of biocide may have limited antimicrobial effects due to the relatively high microbial diversity in marine environments. Therefore, applying a mixture of various biocides may be necessary. In this study, the antimicrobial and anticorrosion properties of a newly designed composite biocide, namely a combination of thymol and benzyldimethyldodecylammonium chloride, were investigated by applying the biocide to 304 stainless steel substrates immersed in inocula containing bacterial strains from Tamsui and Zuoying harbors. The ability of 3TB and 5TB treatments to prevent sessile cells and biofilm formation on the 304 stainless steel coupon surface was determined through scanning electron microscopy investigation. In addition, confocal laser scanning microscopy indicated that the 5TB treatment achieved a greater bactericidal effect in both the Tamsui and Zuoying inocula. Moreover, electrochemical impedance spectroscopy revealed that the diameter of the Nyquist semicircle was almost completely unaffected by Tamsui or Zuoying under the 5TB treatment. Through these assessments of antimicrobial activity and corrosion resistance, 5TB treatment was demonstrated to have superior bactericidal activity against mixed strains in both southern and northern Taiwanese marine environments.
- Published
- 2021
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37. An Unusual Case of Intramyocardial Dissecting Hematoma.
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Yuen HC, Shek J, Wong CK, Tsui PT, Mok NS, Chan NY, and Lo KY
- Published
- 2021
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38. High prevalence of APOA1/C3/A4/A5 alterations in luminal breast cancers among young women in East Asia.
- Author
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Lin CH, Huang RY, Lu TP, Kuo KT, Lo KY, Chen CH, Chen IC, Lu YS, Chuang EY, Thiery JP, Huang CS, and Cheng AL
- Abstract
In East Asia, the breast cancer incidence rate among women aged <50 years has rapidly increased. Emerging tumors are distinctly characterized by a high prevalence of estrogen receptor (ER)-positive/human epidermal growth factor receptor (HER2)-negative cancer. In the present study, we identified unique genetic alterations in these emerging tumors. We analyzed gene copy number variations (CNVs) in breast tumors from 120 Taiwanese patients, and obtained public datasets of CNV and gene expression (GE). The data regarding CNV and GE were separately compared between East Asian and Western patients, and the overlapping genes identified in the comparisons were explored to identify the gene-gene interaction networks. In the age <50 years/ER + /HER2- subgroup, tumors of East Asian patients exhibited a higher frequency of copy number loss in APOA1/C3/A4/A5, a lipid-metabolizing gene cluster (33 vs. 10%, P < .001) and lower APOA1/C3/A4/A5 expressions than tumors of Western patients. These copy number loss related- and GE-related results were validated in another Taiwanese cohort and in two GE datasets, respectively. The copy number loss was significantly associated with poor survival among Western patients, but not among East Asian patients. Lower APOA1, APOC3, and APOA5 expressions were associated with higher ESTIMATE immune scores, indicating an abundance of tumor-infiltrating immune cells. In conclusion, APOA1/C3/A4/A5 copy number loss was more prevalent in luminal breast tumors among East Asian women aged <50 years, and its immunomodulatory effect on the tumor microenvironment possibly plays various roles in the tumor biology of East Asian patients.
- Published
- 2021
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39. Poly(U)-specific endoribonuclease ENDOU promotes translation of human CHOP mRNA by releasing uORF element-mediated inhibition.
- Author
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Lee HC, Fu CY, Lin CY, Hu JR, Huang TY, Lo KY, Tsai HY, Sheu JC, and Tsai HJ
- Subjects
- Animals, HEK293 Cells, HeLa Cells, Humans, Nucleotide Motifs, Open Reading Frames genetics, Protein Biosynthesis, RNA, Messenger chemistry, RNA, Messenger metabolism, Ribosomes metabolism, Transcription Factor CHOP metabolism, Zebrafish, RNA, Messenger genetics, Transcription Factor CHOP genetics, Uridylate-Specific Endoribonucleases metabolism
- Abstract
Upstream open reading frames (uORFs) are known to negatively affect translation of the downstream ORF. The regulatory proteins involved in relieving this inhibition are however poorly characterized. In response to cellular stress, eIF2α phosphorylation leads to an inhibition of global protein synthesis, while translation of specific factors such as CHOP is induced. We analyzed a 105-nt inhibitory uORF in the transcript of human CHOP (huORF
chop ) and found that overexpression of the zebrafish or human ENDOU poly(U)-endoribonuclease (Endouc or ENDOU-1, respectively) increases CHOP mRNA translation also in the absence of stress. We also found that Endouc/ENDOU-1 binds and cleaves the huORFchop transcript at position 80G-81U, which induces CHOP translation independently of phosphorylated eIF2α. However, both ENDOU and phospho-eIF2α are nonetheless required for maximal translation of CHOP mRNA. Increased levels of ENDOU shift a huORFchop reporter as well as endogenous CHOP transcripts from the monosome to polysome fraction, indicating an increase in translation. Furthermore, we found that the uncapped truncated huORFchop -69-105-nt transcript contains an internal ribosome entry site (IRES), facilitating translation of the cleaved transcript. Therefore, we propose a model where ENDOU-mediated transcript cleavage positively regulates CHOP translation resulting in increased CHOP protein levels upon stress. Specifically, CHOP transcript cleavage changes the configuration of huORFchop thereby releasing its inhibition and allowing the stalled ribosomes to resume translation of the downstream ORF., (© 2021 The Authors. Published under the terms of the CC BY NC ND 4.0 license.)- Published
- 2021
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40. Treatment of Severe Tumoral Calcinosis with Teriparatide in a Dialysis Patient after Total Parathyroidectomy.
- Author
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Sin HK, Wong PN, Lo KY, Lo MW, Chan SF, Lo KC, Wong YY, Ho LY, Kwok WT, Chan KC, Wong AK, and Mak SK
- Abstract
Tumoral calcinosis is a rare but debilitating condition that can affect dialysis patients. Optimal management is largely unknown. We report the clinical course, treatment, and outcome of a peritoneal dialysis (PD) patient who developed tumoral calcinosis refractory to conventional treatment but improved with teriparatide therapy. A 26-year-old lady on PD for 2 years presented to us with tumoral calcinosis involving bilateral hands. Response to surgical excision, parathyroidectomy, and conversion to hemodialysis failed to result in sustained remission, and tumoral calcinosis progressed. After total parathyroidectomy, the patient had transient but partial remission in which her calcinosis deposits remained but were asymptomatic without pain or clinical signs of inflammation. However, she later experienced a relapse with involvement of the left elbow, right shoulder, right hip, and right thigh. Tumoral calcinosis remained uncontrolled resulting in debilitation, likely attributable to poor calcium and phosphate control because of adynamic bone disease after parathyroidectomy despite treatment of superimposed tuberculosis and therapy with sodium thiosulphate and pamidronic acid. Clinical improvement was however evident after the use of teriparatide. Asymptomatic hypocalcemia occurred after teriparatide therapy but resolved after 2 months. In conclusion, teriparatide appears to be useful for treating tumoral calcinosis in the presence of adynamic bone disease. Hypocalcemia can occur in the initial months of therapy., Competing Interests: All the authors declare no conflicts of interest., (Copyright © 2021 Ho-Kwan Sin et al.)
- Published
- 2021
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41. Differences in anti-inflammatory properties of water soluble and insoluble bioactive polysaccharides in lipopolysaccharide-stimulated RAW264.7 macrophages.
- Author
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Su CH, Tseng YT, Lo KY, Lai MN, and Ng LT
- Subjects
- Animals, Anti-Inflammatory Agents metabolism, Anti-Inflammatory Agents pharmacology, Humans, Lipopolysaccharides pharmacology, Mice, Polysaccharides biosynthesis, Polysaccharides isolation & purification, Polysaccharides pharmacology, RAW 264.7 Cells, Anti-Inflammatory Agents chemistry, Inflammation drug therapy, Macrophages drug effects, Polysaccharides chemistry
- Abstract
β-Linked polysaccharides including β-glucans are well known to be important functional ingredients, and are known to possess immunomodulatory and anti-tumor activities. This study aimed to investigate the anti-inflammatory properties and participating receptor of water soluble and insoluble bioactive polysaccharides from Grifola frondosa (GFP, non-digestible water soluble polysaccharides), Laminaria digitata (laminarin, a water soluble β-glucan) and Saccharomyces cerevisiae (zymosan, a water insoluble β-glucan) in lipopolysaccharide (LPS)-stimulated parental and Dectin-1 highly expressing RAW264.7 macrophages. Results showed that GFP and laminarin significantly inhibited nitric oxide and prostaglandin E2 production, but only the GFP with high molecular weight exhibited strong inhibition on pro-inflammatory cytokine (TNF-α and IL-6) secretion in a concentration-dependent manner. The activation of NF-κB was also significantly down-regulated by GFP treatment as compared with cells treated with LPS alone. Although GFP and laminarin were able to bind to β-glucan receptor Dectin-1, there was no relationship between the inhibitory potency and the content of β-glucans in GFP, and these inhibitory effects were not affected by the expression level of Dectin-1 in macrophage cells. In contrast, zymosan significantly intensified LPS-induced inflammatory responses through Dectin-1. In conclusion, these results suggest that the inhibitory effects of water soluble polysaccharides on LPS-induced pro-inflammatory mediator production in murine macrophages may not involve β-glucan receptor Dectin-1.
- Published
- 2020
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42. Structural evolution of in situ boron-doped SiGe ultrathin film analyzed by multi-optical methods.
- Author
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Chang FM, Wu ZZ, Chen Y, Yen TY, Huang YH, Chong LY, JangJian SK, Lee FY, Chang YM, and Lo KY
- Abstract
In situ boron (B)-doped SiGe (BSG) layer is extensively used in the source (S)/(D) drain of metal-oxide-semiconductor field-effect transistors. An unexpected structural evolution occurs in BSG during metallization and activation annealing during actual fabrication, which involves a correlated interaction between B and SiGe. Herein, the complicated phenomena of the structural evolution of BSG were analyzed by 325 nm micro-Raman spectroscopy, x-ray photoelectron spectroscopy (XPS), reflective second harmonic generation (RSHG), and synchrotron x-ray diffraction (XRD). Optical inspection was integrated into these processes to establish a multi-optical method. 325 nm micro-Raman spectroscopy was used to determine variations in Si-Si, Si-Ge, and Ge-Ge bonds in BSG. XPS exhibited the binding energy evolution of Ge3d during different annealing processes at varied Ge ratios and B concentrations. RSHG revealed the polar Si-B and Ge-B bonds formed during annealing. Synchrotron XRD provided the structure and strain changes of BSG. Secondary-ion mass spectrometer profiles provided the species distribution, which was used to examine the results of multi-optical method. Furthermore, double-layered BSG (DBSG) with different B concentrations were analyzed using the multi-optical method. Results revealed that Ge aggregated in the homogeneous interface of DBSG, and that B dopants in BSG served as carrier providers that strongly influenced the BSG structure. However, BSG with excessive B concentration was unstable and increased the B content (SiB
3 ) through metallization. For BSG with a suitable B concentration, the formation of Si-B and Ge-B bonds suppressed the diffusion of Ge from SiGe, thereby reducing the possibility of Ge loss and further B pipe-up in the heavily doped S/D region.- Published
- 2020
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43. Correction: Lin. et al. Effects of Substrate-Coating Materials on the Wound-Healing Process. Materials 2019, 12 , 2775.
- Author
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Lin JY, Lo KY, and Sun YS
- Abstract
The authors wish to make the following correction to this paper [...].
- Published
- 2020
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44. A microfluidics-based wound-healing assay for studying the effects of shear stresses, wound widths, and chemicals on the wound-healing process.
- Author
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Lin JY, Lo KY, and Sun YS
- Subjects
- Animals, Cells, Cultured, Humans, Microfluidics, Stress, Mechanical, Wound Healing
- Abstract
Collective cell migration plays important roles in various physiological processes. To investigate this collective cellular movement, various wound-healing assays have been developed. In these assays, a "wound" is created mechanically, chemically, optically, or electrically out of a cellular monolayer. Most of these assays are subject to drawbacks of run-to-run variations in wound size/shape and damages to cells/substrate. Moreover, in all these assays, cells are cultured in open, static (non-circulating) environments. In this study, we reported a microfluidics-based wound-healing assay by using the trypsin flow-focusing technique. Fibroblasts were first cultured inside this chip to a cellular monolayer. Then three parallel fluidic flows (containing normal medium and trypsin solution) were introduced into the channels, and cells exposed to protease trypsin were enzymatically detached from the surface. Wounds of three different widths were generated, and subsequent wound-healing processes were observed. This assay is capable of creating three or more wounds of different widths for investigating the effects of various physical and chemical stimuli on wound-healing speeds. The effects of shear stresses, wound widths, and β-lapachone (a wound healing-promoting chemical) on wound-healing speeds were studied. It was found that the wound-healing speed (total area healed per unit time) increased with increasing shear stress and wound width, but under a shear stress of 0.174 mPa the linear healing speed (percent area healed per unit time) was independent of the wound width. Also, the addition of β-lapachone up to 0.5 μM did not accelerate wound healing. This microfluidics-based assay can definitely help in understanding the mechanisms of the wound-healing process and developing new wound-healing therapies.
- Published
- 2019
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- View/download PDF
45. Puf6 and Loc1 Are the Dedicated Chaperones of Ribosomal Protein Rpl43 in Saccharomyces cerevisiae .
- Author
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Liang KJ, Yueh LY, Hsu NH, Lai JS, and Lo KY
- Subjects
- Binding Sites, Gene Expression Regulation, Fungal, Karyopherins metabolism, Models, Molecular, Multiprotein Complexes chemistry, Multiprotein Complexes genetics, Multiprotein Complexes metabolism, Mutation, Nuclear Proteins chemistry, Nuclear Proteins genetics, Protein Binding, Protein Conformation, Protein Stability, RNA-Binding Proteins chemistry, RNA-Binding Proteins genetics, Ribosomal Proteins chemistry, Ribosomal Proteins genetics, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins chemistry, Saccharomyces cerevisiae Proteins genetics, Nuclear Proteins metabolism, RNA-Binding Proteins metabolism, Ribosomal Proteins metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Ribosomal proteins are highly expressed, and the quality of ribosomal proteins must be rigorously controlled to build up a functional ribosome. Rpl43, ribosomal protein large subunit 43, is located nearby the E-site of ribosomes. In our previous study, we found that Puf6, Loc1, and Rpl43 form a trimeric complex in Saccharomyces cerevisiae . Rpl43 protein levels are under-accumulated in the absence of PUF6 or LOC1 . However, why the loss of Puf6 or Loc1 decreased the protein levels of Rpl43 remained unclear. In the present study, we further dissected the connections among these three proteins and found that the processing defects of pre-ribosomal RNA in puf6 Δ and loc1 Δ are similar to those of the mutant with depletion of Rpl43. The stability of newly synthesized Rpl43 protein decreased slightly in puf6 Δ and significantly in loc1 Δ. We also found that Puf6 and Loc1 could interact with nascent Rpl43 co-translationally via the N-terminus of Rpl43. While the association and dissociation of Rpl43 with karyopherins did not depend on Puf6 and Loc1, Puf6 and Loc1 interacted with nascent Rpl43 in collaboration. While the N-terminus of Puf6 contained nuclear localization signals for transport, the PUF (Pumilio) domain was essential to interaction with Loc1, Rpl43, and 60S subunits. The C-terminus of Loc1 is more important for interaction with Puf6 and Rpl43. In this study, we found that Puf6 and Loc1 are the dedicated chaperones of ribosomal protein Rpl43 and also analyzed the potential interaction domains among the three proteins. Correct formation of the Puf6, Loc1, and Rpl43 ternary complex is required to properly proceed to the next step in 60S biogenesis.
- Published
- 2019
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46. Use Microfluidic Chips to Study the Phototaxis of Lung Cancer Cells.
- Author
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Lin FY, Lin JY, Lo KY, and Sun YS
- Subjects
- A549 Cells, Animals, Cell Culture Techniques instrumentation, Equipment Design, Humans, Light, Mice, NIH 3T3 Cells, Reactive Oxygen Species metabolism, Cell Movement, Lab-On-A-Chip Devices, Lung Neoplasms metabolism
- Abstract
Cell migration is an important process involved in wound healing, tissue development, and so on. Many studies have been conducted to explore how certain chemicals and electric fields induce cell movements in specific directions, which are phenomena termed chemotaxis and electrotaxis, respectively. However, phototaxis, the directional migration of cells or organisms toward or away from light, is rarely investigated due to the difficulty of generating a precise and controllable light gradient. In this study, we designed and fabricated a microfluidic chip for simultaneously culturing cells and generating a blue light gradient for guiding cell migration. A concentration gradient was first established inside this chip, and by illuminating it with a blue light-emitting diode (LED), a blue light gradient was generated underneath. Cell migration in response to this light stimulus was observed. It was found that lung cancer cells migrated to the dark side of the gradient, and the intracellular reactive oxygen species (ROS) was proportional to the intensity of the blue light.
- Published
- 2019
- Full Text
- View/download PDF
47. Effects of Substrate-Coating Materials on the Wound-Healing Process.
- Author
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Lin JY, Lo KY, and Sun YS
- Abstract
The wound-healing assay is commonly and widely used for investigating collective cell migration under various physical and chemical stimuli. Substrate-coating materials are shown to affect the wound-healing process in a cell-type dependent manner. However, experiment-to-experiment variations make it difficult to compare results from different assays. In this paper, a modified barrier wound-healing assay was reported for studying the wound-healing process on different substrates in one single petri dish. In short, half of a dish was covered with the tape, and coating materials, poly-l-lysine and gelatin, were applied to the surface. After peeling off the tape, half of the surface was coated with the desired material. Then a customized barrier was placed inside the dish to create the wound. The results indicated that surface coating did not affect cell proliferation/viability, and the wound-healing rate increased in coated surfaces compared to uncoated ones. The present study provides a platform for further understanding the mechanisms of substrate coating-dependent wound-healing processes.
- Published
- 2019
- Full Text
- View/download PDF
48. Anti-Ma2-associated paraneoplastic encephalitis eat, sleep and repeat.
- Author
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Peters J, Vijiaratnam N, Lo KY, and Evans AH
- Subjects
- Adult, Autoantibodies blood, Encephalitis complications, Fatal Outcome, Humans, Male, Paraneoplastic Syndromes complications, Antigens, Neoplasm blood, Encephalitis blood, Encephalitis diagnosis, Nerve Tissue Proteins blood, Paraneoplastic Syndromes blood, Paraneoplastic Syndromes diagnosis
- Published
- 2019
- Full Text
- View/download PDF
49. Thallium(I) treatment induces nucleolar stress to stop protein synthesis and cell growth.
- Author
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Chou YT and Lo KY
- Subjects
- Apoptosis drug effects, Cell Cycle Checkpoints drug effects, Cell Proliferation drug effects, Dose-Response Relationship, Drug, Eukaryotic Initiation Factor-2 metabolism, HEK293 Cells, Humans, Phosphorylation drug effects, Ribosome Subunits, Large, Eukaryotic drug effects, Ribosome Subunits, Large, Eukaryotic metabolism, Tumor Suppressor Protein p53 metabolism, Cell Nucleolus drug effects, Cell Nucleolus metabolism, Eukaryotic Initiation Factor-2 biosynthesis, Oxidative Stress drug effects, Thallium toxicity
- Abstract
Thallium is considered as an emergent contaminant owing to its potential use in the superconductor alloys. The monovalent thallium, Tl(I), is highly toxic to the animals as it can affect numerous metabolic processes. Here we observed that Tl(I) decreased protein synthesis and phosphorylated eukaryotic initiation factor 2α. Although Tl(I) has been shown to interact with the sulfhydryl groups of proteins and cause the accumulation of reactive oxygen species, it did not activate endoplasmic reticulum stress. Notably, the level of 60S ribosomal subunit showed significant under-accumulation after the Tl(I) treatment. Given that Tl(I) shares similarities with potassium in terms of the ionic charge and atomic radius, we proposed that Tl(I) occupies certain K
+ -binding sites and inactivates the ribosomal function. However, we observed neither activation of ribophagy nor acceleration of the proteasomal degradation of 60S subunits. On the contrary, the ribosome synthesis pathway was severely blocked, i.e., the impairment of rRNA processing, deformed nucleoli, and accumulation of 60S subunits in the nucleus were observed. Although p53 remained inactivated, the decreased c-Myc and increased p21 levels indicated the activation of nucleolar stress. Therefore, we proposed that Tl(I) interfered the ribosome synthesis, thus resulting in cell growth inhibition and lethality.- Published
- 2019
- Full Text
- View/download PDF
50. Establishing a quick screening method by using a microfluidic chip to evaluate cytotoxicity of metal contaminants.
- Author
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Tan SW, Chen PJ, Sun YS, Chou SE, Lin FY, and Lo KY
- Abstract
Due to rapid industrialization and urbanization, the environment is exposed to many chemicals from natural or anthropogenic sources. The contaminants impact eco-system and human health via food chain. Animals, including humans, are likely to accumulate contaminants in their bodies from direct exposure or feeding behavior, resulting in toxicity. Therefore, evaluation of the toxicity of contaminants is an important issue. Metals are highly toxic but the toxicity depends on many factors, including the valance and the complex form of metals, the organic matter level in the environment, the reducing/oxidizing condition of the environment, and etc. Since the level of metal amount does not directly correlate to bioavailability, cell culture is usually used for toxicity evaluation. In this study, a microfluidic chip was developed to evaluate the cell toxicity from exposure to metals, copper and thallium. Compared to traditional cytotoxicity assay using static state culture with tetrazolium reagent, this microfluidic chip can generate various shear stresses by changing geometry of culture areas or flow rate. Enhancement of shear stresses could increase cell sensitivity toward metal exposure. Therefore, this platform provides a more sensitive platform for quantitative analysis of cell toxicity and could be applied to evaluate toxicity from environmental samples., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
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