Search

Your search keyword '"MERCATI, Francesco"' showing total 233 results
Start Over Author "MERCATI, Francesco"
233 results on '"MERCATI, Francesco"'

1. Complementing model species with model clades.

Author

Mabry, Makenzie, Abrahams, R, Al-Shehbaz, Ihsan, Baker, William, Barak, Simon, Barker, Michael, Barrett, Russell, Beric, Aleksandra, Bhattacharya, Samik, Carey, Sarah, Conant, Gavin, Conran, John, Dassanayake, Maheshi, Edger, Patrick, Hall, Jocelyn, Hao, Yue, Hendriks, Kasper, Hibberd, Julian, King, Graham, Koch, Marcus, Leitch, Ilia, Lens, Frederic, Lysak, Martin, McAlvay, Alex, McKibben, Michael, Mercati, Francesco, Moore, Richard, Mummenhoff, Klaus, Murphy, Daniel, Nikolov, Lachezar, Pisias, Michael, Roalson, Eric, Schranz, M, Thomas, Shawn, Yu, Qingyi, Yocca, Alan, Pires, J, Harkess, Alex, and Kliebenstein, Dan

Subjects
Arabidopsis, Brassicales, model order, model species, phylogeny
Abstract

Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here we promote the utility of the Arabidopsis thaliana model species, especially the ability to connect its genetic and functional resources, to species across the entire Brassicales order. We focus on the utility of using genomics and phylogenomics to bridge the evolution and diversification of several traits across the Brassicales to the resources in Arabidopsis, thereby extending scope from a model species by establishing a model clade. These Brassicales-wide traits are discussed in the context of both the model species Arabidopsis thaliana and the family Brassicaceae. We promote the utility of such a model clade and make suggestions for building global networks to support future studies in the model order Brassicales.

Published
2023

4. Integrated omics approach reveals the molecular pathways activated in tomato by Kocuria rhizophila, a soil plant growth-promoting bacterium

Author

Mauceri, Antonio, Puccio, Guglielmo, Faddetta, Teresa, Abbate, Loredana, Polito, Giulia, Caldiero, Ciro, Renzone, Giovanni, Lo Pinto, Margot, Alibrandi, Pasquale, Vaccaro, Edoardo, Abenavoli, Maria Rosa, Scaloni, Andrea, Sunseri, Francesco, Cavalieri, Vincenzo, Palumbo Piccionello, Antonio, Gallo, Giuseppe, and Mercati, Francesco

Published
2024
Full Text
View/download PDF

5. Essential Oils in Citrus

Author

Fatta Del Bosco, Sergio, Abbate, Loredana, Mercati, Francesco, Napoli, Edoardo, Ruberto, Giuseppe, Kole, Chittaranjan, Series Editor, Gentile, Alessandra, editor, La Malfa, Stefano, editor, and Deng, Ziniu, editor

Published
2020
Full Text
View/download PDF

7. The asparagus genome sheds light on the origin and evolution of a young Y chromosome.

Author

Harkess, Alex, Zhou, Jinsong, Xu, Chunyan, Bowers, John, Van der Hulst, Ron, Ayyampalayam, Saravanaraj, Mercati, Francesco, Riccardi, Paolo, McKain, Michael, Kakrana, Atul, Tang, Haibao, Ray, Jeremy, Groenendijk, John, Arikit, Siwaret, Mathioni, Sandra, Nakano, Mayumi, Shan, Hongyan, Telgmann-Rauber, Alexa, Kanno, Akira, Yue, Zhen, Chen, Haixin, Li, Wenqi, Chen, Yanling, Xu, Xiangyang, Zhang, Yueping, Luo, Shaochun, Chen, Helong, Gao, Jianming, Mao, Zichao, Pires, J, Luo, Meizhong, Kudrna, Dave, Wing, Rod, Meyers, Blake, Yi, Kexian, Kong, Hongzhi, Lavrijsen, Pierre, Sunseri, Francesco, Falavigna, Agostino, Ye, Yin, Leebens-Mack, James, and Chen, Guangyu

Subjects
Arabidopsis, Asparagus Plant, Chromosomes, Plant, Evolution, Molecular, Genome, Plant, Hermaphroditic Organisms, Plant Infertility, Sex Chromosomes, Sex Determination Processes
Abstract

Sex chromosomes evolved from autosomes many times across the eukaryote phylogeny. Several models have been proposed to explain this transition, some involving male and female sterility mutations linked in a region of suppressed recombination between X and Y (or Z/W, U/V) chromosomes. Comparative and experimental analysis of a reference genome assembly for a double haploid YY male garden asparagus (Asparagus officinalis L.) individual implicates separate but linked genes as responsible for sex determination. Dioecy has evolved recently within Asparagus and sex chromosomes are cytogenetically identical with the Y, harboring a megabase segment that is missing from the X. We show that deletion of this entire region results in a male-to-female conversion, whereas loss of a single suppressor of female development drives male-to-hermaphrodite conversion. A single copy anther-specific gene with a male sterile Arabidopsis knockout phenotype is also in the Y-specific region, supporting a two-gene model for sex chromosome evolution.

Published
2017

8. Complementing model species with model clades

Author

Mabry, Makenzie, Abrahams, R.S., Al-Shehbaz, Ihsan, Baker, William, Barak, Simon, Barker, Michael, Barrett, Russell, Beric, Aleksandra, Bhattacharya, Samik, Carey, Sarah, Conant, Gavin, Conran, John, Dassanayake, Maheshi, Edger, Patrick, Hall, Jocelyn, Hao, Yue, Hendriks, Kasper, Hibberd, Julian, King, Graham, Kliebenstein, Daniel, Koch, Marcus, Leitch, Ilia, Lens, Frederic, Lysak, Martin, Mcalvay, Alex, Mckibben, Michael, Mercati, Francesco, Moore, Richard, Mummenhoff, Klaus, Murphy, Daniel, Nikolov, Lachezar, Pisias, Michael, Roalson, Eric, Schranz, Eric, Thomas, Shawn, Yu, Qingyi, Yocca, Alan, Pires, Chris, Harkess, Alex, Mabry, Makenzie, Abrahams, R.S., Al-Shehbaz, Ihsan, Baker, William, Barak, Simon, Barker, Michael, Barrett, Russell, Beric, Aleksandra, Bhattacharya, Samik, Carey, Sarah, Conant, Gavin, Conran, John, Dassanayake, Maheshi, Edger, Patrick, Hall, Jocelyn, Hao, Yue, Hendriks, Kasper, Hibberd, Julian, King, Graham, Kliebenstein, Daniel, Koch, Marcus, Leitch, Ilia, Lens, Frederic, Lysak, Martin, Mcalvay, Alex, Mckibben, Michael, Mercati, Francesco, Moore, Richard, Mummenhoff, Klaus, Murphy, Daniel, Nikolov, Lachezar, Pisias, Michael, Roalson, Eric, Schranz, Eric, Thomas, Shawn, Yu, Qingyi, Yocca, Alan, Pires, Chris, and Harkess, Alex

Abstract

Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here we promote the utility of the Arabidopsis thaliana model species, especially the ability to connect its genetic and functional resources, to species across the entire Brassicales order. We focus on the utility of using genomics and phylogenomics to bridge the evolution and diversification of several traits across the Brassicales to the resources in Arabidopsis, thereby extending scope from a model species by establishing a “model clade”. These Brassicales-wide traits are discussed in the context of both the model species Arabidopsis thaliana and the family Brassicaceae. We promote the utility of such a “model clade” and make suggestions for building global networks to support future studies in the model order Brassicales., Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant Tree of Life continues to improve. The intersection of these two research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here we promote the utility of the Arabidopsis thaliana model species, especially the ability to connect its genetic and functional resources, to species across the entire Brassicales order. We focus on the utility of using genomics and phylogenomics to bridge the evolution and diversification of several traits across the Brassicales to the resources in Arabidopsis, thereby extending scope from a model species by establishing a “model clade”. These Brassicales-wide traits are discussed in the context of both the model species Arabidopsis thaliana and the family Brassicaceae. We promote the utility of such a “model clade” and make suggestions for building global networks to support future studies in the model order Brassicales.

Published
2024

11. Dual domestications and origin of traits in grapevine evolution

Author

Duan, Shengchang [0000-0003-2728-8406], Xia, Qiuju [0000-0002-8502-2107], Liang, Zhenchang [0000-0002-2195-6613], Margaryan, Kristine [0000-0003-0230-1424], Musayev, Mirza [0000-0002-3904-1227], Goryslavets, Svitlana [0000-0002-6749-8048], Zdunić, Goran [0000-0002-9618-2093], Bert, Pierre-François [0000-0003-3209-952X], Lacombe, Thierry [0000-0001-9968-8228], Maul, Erika [0000-0002-3467-7672], Bitskinashvili, Kakha [0000-0003-0720-4770], Bisztray, György Dénes [0000-0001-5646-1357], Drori, Elyashiv [0000-0003-3353-0465], De Lorenzis, G. [0000-0001-8943-1218], Popescu, Carmen Florentina [0000-0003-3937-6200], Arroyo García, Rosa Adela [0000-0002-0597-1282], Chen, Baozheng [0009-0009-8555-8380], Dai, Zhanwu [0000-0002-7625-8337], Spotar, Gennady [0000-0001-6725-250X], Girollet, Nabil [0000-0003-2636-434X], Delrot, Serge [0000-0001-9602-0441], Ollat, Nathalie [0000-0002-6182-9686], This, Patrice [0000-0002-3024-5813], Sarah, Gautier [0000-0001-5179-972X], Laucou, Valérie [0000-0001-5311-785X], Bacilieri, Roberto [0000-0002-3342-362X], Röckel, Franco [0000-0002-2197-0669], Guan, Pingyin [0000-0003-4890-3412], Riemann, Michael [0000-0003-0287-2112], Ujmajuridze, Levan [0000-0003-2907-4276], Zakalashvili, Tekle [0000-0002-8806-9381], Höhn, Maria [0000-0002-8587-8271], Jahnke, Gizella [0000-0001-6873-2783], Kiss, Erzsébet [0000-0002-8933-5311], Deák, Tamás [0000-0001-8172-3259], Rahimi, Oshrit [0000-0001-9415-1122], Hübner, Sariel [0000-0003-3660-4634], Grassi, Fabrizio [0000-0003-3606-6469], Mercati, Francesco [0000-0003-1356-2881], Eiras-Dias, José [0000-0001-7997-8199], Dumitru, Anamaria Mirabela [0000-0001-7160-0036], Carrasco, David [0000-0002-0551-820X], Rodriguez-Izquierdo, Alberto [0000-0003-4755-3086], Muñoz, G. [0000-0003-1186-3517], Uysal, Tamer [0000-0003-0171-0605], Özer, Cengiz [0000-0002-9833-3975], Kazan, Kemal [0000-0002-5169-8934], Wang, Yunyue [0000-0001-8336-0578], Zhao, Maoxiang [0000-0002-5112-6960], Weiss, Ehud [0000-0002-9730-4726], Dong, Yang, Duan, Shengchang, Xia, Qiuju, Liang, Zhenchang, Dong, Xiao, Margaryan, Kristine, Musayev, Mirza, Goryslavets, Svitlana, Zdunić, Goran, Bert, Pierre-François, Lacombe, Thierry, Maul, Erika, Nick, Peter, Bitskinashvili, Kakha, Bisztray, György Dénes, Drori, Elyashiv, De Lorenzis, G., Cunha, Jorge, Popescu, Carmen Florentina, Arroyo García, Rosa Adela, Arnold, Claire, Ergül, Ali, Zhu, Yifan, Ma, Chao, Wang, Shufen, Liu, Siqi, Tang, Liu, Wang, Chunping, Li, Dawei, Pan, Yunbing, Li, Jingxian, Yang, Ling, Li, Xuzhen, Xiang, Guisheng, Yang, Zijiang, Chen, Baozheng, Dai, Zhanwu, Wang, Yi, Arakelyan, Arsen, Kuliyev, Varis, Spotar, Gennady, Girollet, Nabil, Delrot, Serge, Ollat, Nathalie, This, Patrice, Marchal, Cécile, Sarah, Gautier, Laucou, Valérie, Bacilieri, Roberto, Röckel, Franco, Guan, Pingyin, Jung, Andreas, Riemann, Michael, Ujmajuridze, Levan, Zakalashvili, Tekle, Maghradze, David, Höhn, Maria, Jahnke, Gizella, Kiss, Erzsébet, Deák, Tamás, Rahimi, Oshrit, Hübner, Sariel, Grassi, Fabrizio, Mercati, Francesco, Sunseri, Francesco, Eiras-Dias, José, Dumitru, Anamaria M., Carrasco Gata, David, Rodriguez-Izquierdo, Alberto, Muñoz, G., Uysal, Tamer, Özer, Cengiz, Kazan, Kemal, Xu, Meilong, Wang, Yunyue, Zhu, Shusheng, Lu, Jiang, Zhao, Maoxiang, Wang, Lei, Jiu, Songtao, Zhang, Ying, Sun, Lei, Yang, Huanming, Weiss, Ehud, Wang, Shiping, Zhu, Youyong, Li, Shaohua, Sheng, Jun, Wei, Chen, Duan, Shengchang [0000-0003-2728-8406], Xia, Qiuju [0000-0002-8502-2107], Liang, Zhenchang [0000-0002-2195-6613], Margaryan, Kristine [0000-0003-0230-1424], Musayev, Mirza [0000-0002-3904-1227], Goryslavets, Svitlana [0000-0002-6749-8048], Zdunić, Goran [0000-0002-9618-2093], Bert, Pierre-François [0000-0003-3209-952X], Lacombe, Thierry [0000-0001-9968-8228], Maul, Erika [0000-0002-3467-7672], Bitskinashvili, Kakha [0000-0003-0720-4770], Bisztray, György Dénes [0000-0001-5646-1357], Drori, Elyashiv [0000-0003-3353-0465], De Lorenzis, G. [0000-0001-8943-1218], Popescu, Carmen Florentina [0000-0003-3937-6200], Arroyo García, Rosa Adela [0000-0002-0597-1282], Chen, Baozheng [0009-0009-8555-8380], Dai, Zhanwu [0000-0002-7625-8337], Spotar, Gennady [0000-0001-6725-250X], Girollet, Nabil [0000-0003-2636-434X], Delrot, Serge [0000-0001-9602-0441], Ollat, Nathalie [0000-0002-6182-9686], This, Patrice [0000-0002-3024-5813], Sarah, Gautier [0000-0001-5179-972X], Laucou, Valérie [0000-0001-5311-785X], Bacilieri, Roberto [0000-0002-3342-362X], Röckel, Franco [0000-0002-2197-0669], Guan, Pingyin [0000-0003-4890-3412], Riemann, Michael [0000-0003-0287-2112], Ujmajuridze, Levan [0000-0003-2907-4276], Zakalashvili, Tekle [0000-0002-8806-9381], Höhn, Maria [0000-0002-8587-8271], Jahnke, Gizella [0000-0001-6873-2783], Kiss, Erzsébet [0000-0002-8933-5311], Deák, Tamás [0000-0001-8172-3259], Rahimi, Oshrit [0000-0001-9415-1122], Hübner, Sariel [0000-0003-3660-4634], Grassi, Fabrizio [0000-0003-3606-6469], Mercati, Francesco [0000-0003-1356-2881], Eiras-Dias, José [0000-0001-7997-8199], Dumitru, Anamaria Mirabela [0000-0001-7160-0036], Carrasco, David [0000-0002-0551-820X], Rodriguez-Izquierdo, Alberto [0000-0003-4755-3086], Muñoz, G. [0000-0003-1186-3517], Uysal, Tamer [0000-0003-0171-0605], Özer, Cengiz [0000-0002-9833-3975], Kazan, Kemal [0000-0002-5169-8934], Wang, Yunyue [0000-0001-8336-0578], Zhao, Maoxiang [0000-0002-5112-6960], Weiss, Ehud [0000-0002-9730-4726], Dong, Yang, Duan, Shengchang, Xia, Qiuju, Liang, Zhenchang, Dong, Xiao, Margaryan, Kristine, Musayev, Mirza, Goryslavets, Svitlana, Zdunić, Goran, Bert, Pierre-François, Lacombe, Thierry, Maul, Erika, Nick, Peter, Bitskinashvili, Kakha, Bisztray, György Dénes, Drori, Elyashiv, De Lorenzis, G., Cunha, Jorge, Popescu, Carmen Florentina, Arroyo García, Rosa Adela, Arnold, Claire, Ergül, Ali, Zhu, Yifan, Ma, Chao, Wang, Shufen, Liu, Siqi, Tang, Liu, Wang, Chunping, Li, Dawei, Pan, Yunbing, Li, Jingxian, Yang, Ling, Li, Xuzhen, Xiang, Guisheng, Yang, Zijiang, Chen, Baozheng, Dai, Zhanwu, Wang, Yi, Arakelyan, Arsen, Kuliyev, Varis, Spotar, Gennady, Girollet, Nabil, Delrot, Serge, Ollat, Nathalie, This, Patrice, Marchal, Cécile, Sarah, Gautier, Laucou, Valérie, Bacilieri, Roberto, Röckel, Franco, Guan, Pingyin, Jung, Andreas, Riemann, Michael, Ujmajuridze, Levan, Zakalashvili, Tekle, Maghradze, David, Höhn, Maria, Jahnke, Gizella, Kiss, Erzsébet, Deák, Tamás, Rahimi, Oshrit, Hübner, Sariel, Grassi, Fabrizio, Mercati, Francesco, Sunseri, Francesco, Eiras-Dias, José, Dumitru, Anamaria M., Carrasco Gata, David, Rodriguez-Izquierdo, Alberto, Muñoz, G., Uysal, Tamer, Özer, Cengiz, Kazan, Kemal, Xu, Meilong, Wang, Yunyue, Zhu, Shusheng, Lu, Jiang, Zhao, Maoxiang, Wang, Lei, Jiu, Songtao, Zhang, Ying, Sun, Lei, Yang, Huanming, Weiss, Ehud, Wang, Shiping, Zhu, Youyong, Li, Shaohua, Sheng, Jun, and Wei, Chen

Abstract

We elucidate grapevine evolution and domestication histories with 3525 cultivated and wild accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape ecotypes caused by continuous habitat fragmentation. Then, domestication occurred concurrently about 11,000 years ago in Western Asia and the Caucasus to yield table and wine grapevines. The Western Asia domesticates dispersed into Europe with early farmers, introgressed with ancient wild western ecotypes, and subsequently diversified along human migration trails into muscat and unique western wine grape ancestries by the late Neolithic. Analyses of domestication traits also reveal new insights into selection for berry palatability, hermaphroditism, muscat flavor, and berry skin color. These data demonstrate the role of the grapevines in the early inception of agriculture across Eurasia.

Published
2023

13. Complementing model species with model clades

Author

Mabry, Makenzie E, primary, Abrahams, R Shawn, additional, Al-Shehbaz, Ihsan A, additional, Baker, William J, additional, Barak, Simon, additional, Barker, Michael S, additional, Barrett, Russell L, additional, Beric, Aleksandra, additional, Bhattacharya, Samik, additional, Carey, Sarah B, additional, Conant, Gavin C, additional, Conran, John G, additional, Dassanayake, Maheshi, additional, Edger, Patrick P, additional, Hall, Jocelyn C, additional, Hao, Yue, additional, Hendriks, Kasper P, additional, Hibberd, Julian M, additional, King, Graham J, additional, Kliebenstein, Daniel J, additional, Koch, Marcus A, additional, Leitch, Ilia J, additional, Lens, Frederic, additional, Lysak, Martin A, additional, McAlvay, Alex C, additional, McKibben, Michael T W, additional, Mercati, Francesco, additional, Moore, Richard C, additional, Mummenhoff, Klaus, additional, Murphy, Daniel J, additional, Nikolov, Lachezar A, additional, Pisias, Michael, additional, Roalson, Eric H, additional, Schranz, M Eric, additional, Thomas, Shawn K, additional, Yu, Qingyi, additional, Yocca, Alan, additional, Pires, J Chris, additional, and Harkess, Alex E, additional

Published
2023
Full Text
View/download PDF

17. MOLECULAR TRACKING OF Acidovorax citrulli: UNVEILING PATHOGEN DYNAMICS AND BLOTCH DISEASE OUTBREAKS THROUGH SPECIFIC MARKERS.

Author

SILME, Ragıp Soner, ZERBO, Marcello, MERCATI, Francesco, KARATAŞ, Ali, BAŞTAŞ, Kubilay K., CARIMI, Francesco, and BAYSAL, Ömür

Subjects
MICROSATELLITE repeats, BLOTCH diseases, DISEASE outbreaks, WHOLE genome sequencing, GENETIC variation, MOSAIC viruses
Abstract

Copyright of Genetika (0534-0012) is the property of Serbian Genetics Society and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Published
2024
Full Text
View/download PDF

18. Dual domestications and origin of traits in grapevine evolution

Author

Dong, Yang, primary, Duan, Shengchang, additional, Xia, Qiuju, additional, Liang, Zhenchang, additional, Dong, Xiao, additional, Margaryan, Kristine, additional, Musayev, Mirza, additional, Goryslavets, Svitlana, additional, Zdunić, Goran, additional, Bert, Pierre-François, additional, Lacombe, Thierry, additional, Maul, Erika, additional, Nick, Peter, additional, Bitskinashvili, Kakha, additional, Bisztray, György Dénes, additional, Drori, Elyashiv, additional, De Lorenzis, Gabriella, additional, Cunha, Jorge, additional, Popescu, Carmen Florentina, additional, Arroyo-Garcia, Rosa, additional, Arnold, Claire, additional, Ergül, Ali, additional, Zhu, Yifan, additional, Ma, Chao, additional, Wang, Shufen, additional, Liu, Siqi, additional, Tang, Liu, additional, Wang, Chunping, additional, Li, Dawei, additional, Pan, Yunbing, additional, Li, Jingxian, additional, Yang, Ling, additional, Li, Xuzhen, additional, Xiang, Guisheng, additional, Yang, Zijiang, additional, Chen, Baozheng, additional, Dai, Zhanwu, additional, Wang, Yi, additional, Arakelyan, Arsen, additional, Kuliyev, Varis, additional, Spotar, Gennady, additional, Girollet, Nabil, additional, Delrot, Serge, additional, Ollat, Nathalie, additional, This, Patrice, additional, Marchal, Cécile, additional, Sarah, Gautier, additional, Laucou, Valérie, additional, Bacilieri, Roberto, additional, Röckel, Franco, additional, Guan, Pingyin, additional, Jung, Andreas, additional, Riemann, Michael, additional, Ujmajuridze, Levan, additional, Zakalashvili, Tekle, additional, Maghradze, David, additional, Höhn, Maria, additional, Jahnke, Gizella, additional, Kiss, Erzsébet, additional, Deák, Tamás, additional, Rahimi, Oshrit, additional, Hübner, Sariel, additional, Grassi, Fabrizio, additional, Mercati, Francesco, additional, Sunseri, Francesco, additional, Eiras-Dias, José, additional, Dumitru, Anamaria Mirabela, additional, Carrasco, David, additional, Rodriguez-Izquierdo, Alberto, additional, Muñoz, Gregorio, additional, Uysal, Tamer, additional, Özer, Cengiz, additional, Kazan, Kemal, additional, Xu, Meilong, additional, Wang, Yunyue, additional, Zhu, Shusheng, additional, Lu, Jiang, additional, Zhao, Maoxiang, additional, Wang, Lei, additional, Jiu, Songtao, additional, Zhang, Ying, additional, Sun, Lei, additional, Yang, Huanming, additional, Weiss, Ehud, additional, Wang, Shiping, additional, Zhu, Youyong, additional, Li, Shaohua, additional, Sheng, Jun, additional, and Chen, Wei, additional

Published
2023
Full Text
View/download PDF

20. Bioactive Metabolite Survey of Actinobacteria Showing Plant Growth Promoting Traits to Develop Novel Biofertilizers

Author

Faddetta, Teresa, primary, Polito, Giulia, additional, Abbate, Loredana, additional, Alibrandi, Pasquale, additional, Zerbo, Marcello, additional, Caldiero, Ciro, additional, Reina, Chiara, additional, Puccio, Guglielmo, additional, Vaccaro, Edoardo, additional, Abenavoli, Maria Rosa, additional, Cavalieri, Vincenzo, additional, Mercati, Francesco, additional, Palumbo Piccionello, Antonio, additional, and Gallo, Giuseppe, additional

Published
2023
Full Text
View/download PDF

21. Complementing model species with model clades

Author

Mabry, Makenzie E, Abrahams, R Shawn, Al-Shehbaz, Ihsan A, Baker, William J, Barak, Simon, Barker, Michael S, Barrett, Russell L, Beric, Aleksandra, Bhattacharya, Samik, Carey, Sarah B, Conant, Gavin C, Conran, John G, Dassanayake, Maheshi, Edger, Patrick P, Hall, Jocelyn C, Hao, Yue, Hendriks, K. (Kasper), Hibberd, Julian M, King, Graham J, Kliebenstein, Daniel J, Koch, Marcus A, Leitch, Ilia J, Lens, F. (Frederic), Lysak, Martin A, McAlvay, Alex C, McKibben, Michael T W, Mercati, Francesco, Moore, Richard C, Mummenhoff, Klaus, Murphy, Daniel J, Nikolov, Lachezar A, Pisias, Michael, Roalson, Eric H, Schranz, M Eric, Thomas, Shawn K, Yu, Qingyi, Yocca, Alan, Pires, J Chris, Harkess, Alex E, Mabry, Makenzie E, Abrahams, R Shawn, Al-Shehbaz, Ihsan A, Baker, William J, Barak, Simon, Barker, Michael S, Barrett, Russell L, Beric, Aleksandra, Bhattacharya, Samik, Carey, Sarah B, Conant, Gavin C, Conran, John G, Dassanayake, Maheshi, Edger, Patrick P, Hall, Jocelyn C, Hao, Yue, Hendriks, K. (Kasper), Hibberd, Julian M, King, Graham J, Kliebenstein, Daniel J, Koch, Marcus A, Leitch, Ilia J, Lens, F. (Frederic), Lysak, Martin A, McAlvay, Alex C, McKibben, Michael T W, Mercati, Francesco, Moore, Richard C, Mummenhoff, Klaus, Murphy, Daniel J, Nikolov, Lachezar A, Pisias, Michael, Roalson, Eric H, Schranz, M Eric, Thomas, Shawn K, Yu, Qingyi, Yocca, Alan, Pires, J Chris, and Harkess, Alex E

Abstract

Model species continue to underpin groundbreaking plant science research. At the same time, the phylogenetic resolution of the land plant tree of life continues to improve. The intersection of these 2 research paths creates a unique opportunity to further extend the usefulness of model species across larger taxonomic groups. Here we promote the utility of the Arabidopsis thaliana model species, especially the ability to connect its genetic and functional resources, to species across the entire Brassicales order. We focus on the utility of using genomics and phylogenomics to bridge the evolution and diversification of several traits across the Brassicales to the resources in Arabidopsis, thereby extending scope from a model species by establishing a “model clade.” These Brassicales-wide traits are discussed in the context of both the model species Arabidopsis and the family Brassicaceae. We promote the utility of such a “model clade” and make suggestions for building global networks to support future studies in the model order Brassicales.

Published
2023
Full Text
View/download PDF

24. Genetic Diversity and Population Structure of Common Bean (Phaseolus vulgaris L.) Landraces in the Lazio Region of Italy

Author

Catarcione, Giulio, primary, Paolacci, Anna Rita, additional, Alicandri, Enrica, additional, Gramiccia, Elena, additional, Taviani, Paola, additional, Rea, Roberto, additional, Costanza, Maria Teresa, additional, De Lorenzis, Gabriella, additional, Puccio, Guglielmo, additional, Mercati, Francesco, additional, and Ciaffi, Mario, additional

Published
2023
Full Text
View/download PDF

29. Two main distinct evolutionary stories describe the Italian grapevine assortment.

Author

Crespan, Manna, Mercati, Francesco, De Lorenzis, Gabriella, D’Onofrio, Claudio, and Sunseri, Francesco

Subjects
POPULATION genetics, GENE flow, GENETIC variation, GRAPE growing, VITIS vinifera, GRAPES
Abstract

A dataset of high-quality 7k SNP profiles of 1,038 unique Eurasian grapevine varieties was used to infer the most likely grapevine migration events, a spatial ancestry estimation, and a model about the origin of Eurasian grapevine germplasm. The comparison of putative gene flow scenarios from Caucasus throughout Europe aided to fit the more reliable spreading routes around the Mediterranean Basin. The same dataset was also used to assess the population genetic diversity, structure, and relatedness of Italian varieties. These data suggested a different history between Northern and Southern Italian grapevines, appearing clearly split into two different clusters. Interestingly, the Italian genotypes were shown to be distinguishable from all the other Eurasian populations for the first time. The same SNP panel was used to determine parental relationships, identifying the main parents of traditional Italian and closely related cultivars. The parentage network suggested that Italian germplasm largely originated from a few key parents distributed into several geographical areas of genetic influence, with more or less large overlaps. These key cultivars are ‘Bombino bianco’, ‘Garganega’/‘Grecanico’, ‘Mantonico bianco’, ‘Orsolina’/‘Coccalona nera’, ‘Muscat à petits grains blanc’, ‘Malvasia odorosissima’, ‘Sangiovese’, ‘Sciaccarello’, ‘Visparola’ and ‘Vulpea’. The pedigree reconstruction by fullsib and second-degree relationships highlighted the pivotal role of some cultivars, such as ‘Visparola’, until now scarcely known. A hypothetic migration of this variety from Southern to Northern Italy along the Eastern side, as well as ‘Sangiovese’ migration from Southern to Central Italy along the Western side might be supposed. Moreover, ‘Muscat à petits grains blanc’, mainly through its offspring ‘Malvasia odorosissima’, furnished a consistent contribution to the development of many aromatic grapes grown in the Northern-Western part of the Italian Peninsula. These results represent the most complete study of grapevine Italian population genetics that has been carried out until now on the Italian germplasm. [ABSTRACT FROM AUTHOR]

Published
2023
Full Text
View/download PDF

32. WRKY Gene Family Drives Dormancy Release in Onion Bulbs

Author

Puccio, Guglielmo, Crucitti, Antonino, Tiberini, Antonio, Mauceri, Antonio, Taglienti, Anna, Piccionello, Antonio Palumbo, Carimi, Francesco, van Kaauwen, Martijn, Scholten, Olga, Sunseri, Francesco, Vosman, Ben, Mercati, Francesco, Puccio, Guglielmo, Crucitti, Antonino, Tiberini, Antonio, Mauceri, Antonio, Taglienti, Anna, Piccionello, Antonio Palumbo, Carimi, Francesco, van Kaauwen, Martijn, Scholten, Olga, Sunseri, Francesco, Vosman, Ben, and Mercati, Francesco

Abstract

Onion (Allium cepa L.) is an important bulb crop grown worldwide. Dormancy in bulbous plants is an important physiological state mainly regulated by a complex gene network that determines a stop of vegetative growth during unfavorable seasons. Limited knowledge on the molecular mechanisms that regulate dormancy in onion were available until now. Here, a comparison between uninfected and onion yellow dwarf virus (OYDV)-infected onion bulbs highlighted an altered dormancy in the virus-infected plants, causing several symptoms, such as leaf striping, growth reduction, early bulb sprouting and rooting, as well as a lower abscisic acid (ABA) level at the start of dormancy. Furthermore, by comparing three dormancy stages, almost five thousand four hundred (5390) differentially expressed genes (DEGs) were found in uninfected bulbs, while the number of DEGs was significantly reduced (1322) in OYDV-infected bulbs. Genes involved in cell wall modification, proteolysis, and hormone signaling, such as ABA, gibberellins (GAs), indole3-acetic acid (IAA), and brassinosteroids (BRs), that have already been reported as key dormancyrelated pathways, were the most enriched ones in the healthy plants. Interestingly, several transcription factors (TFs) were up-regulated in the uninfected bulbs, among them three genes belonging to the WRKY family, for the first time characterized in onion, were identified during dormancy release. The involvement of specific WRKY genes in breaking dormancy in onion was confirmed by GO enrichment and network analysis, highlighting a correlation between AcWRKY32 and genes driving plant development, cell wall modification, and division via gibberellin and auxin homeostasis, two key processes in dormancy release. Overall, we present, for the first time, a detailed molecular analysis of the dormancy process, a description of the WRKY-TF family in onion, providing a better understanding of the role played by AcWRKY32 in the bulb dormancy release. The TF coexpre

Published
2022

34. Multiple fungal diseases resistance induction in Cucumis melo through co-transformation of different pathogenesis related (PR) protein genes

Author

Raji, Mohammad Reza, primary, Lotfi, Mahmoud, additional, Tohidfar, Masoud, additional, Ramshini, Hossein, additional, Sahebani, Navazollah, additional, Aalifar, Mostafa, additional, Baratian, Mahnaz, additional, Mercati, Francesco, additional, De Michele, Roberto, additional, and Carimi, Francesco, additional

Published
2022
Full Text
View/download PDF

35. WRKY Gene Family Drives Dormancy Release in Onion Bulbs

Author

Puccio, Guglielmo, primary, Crucitti, Antonino, additional, Tiberini, Antonio, additional, Mauceri, Antonio, additional, Taglienti, Anna, additional, Palumbo Piccionello, Antonio, additional, Carimi, Francesco, additional, van Kaauwen, Martijn, additional, Scholten, Olga, additional, Sunseri, Francesco, additional, Vosman, Ben, additional, and Mercati, Francesco, additional

Published
2022
Full Text
View/download PDF

36. Uncovering Pathways Highly Correlated to NUE through a Combined Metabolomics and Transcriptomics Approach in Eggplant

Author

Mauceri, Antonio, primary, Aci, Meriem Miyassa, additional, Toppino, Laura, additional, Panda, Sayantan, additional, Meir, Sagit, additional, Mercati, Francesco, additional, Araniti, Fabrizio, additional, Lupini, Antonio, additional, Panuccio, Maria Rosaria, additional, Rotino, Giuseppe Leonardo, additional, Aharoni, Asaph, additional, Abenavoli, Maria Rosa, additional, and Sunseri, Francesco, additional

Published
2022
Full Text
View/download PDF

41. Integrated Bayesian Approaches Shed Light on the Dissemination Routes of the Eurasian Grapevine Germplasm

Author

Mercati, Francesco, primary, De Lorenzis, Gabriella, additional, Mauceri, Antonio, additional, Zerbo, Marcello, additional, Brancadoro, Lucio, additional, D'Onofrio, Claudio, additional, Morcia, Caterina, additional, Barbagallo, Maria Gabriella, additional, Bignami, Cristina, additional, Gardiman, Massimo, additional, de Palma, Laura, additional, Ruffa, Paola, additional, Novello, Vittorino, additional, Crespan, Manna, additional, and Sunseri, Francesco, additional

Published
2021
Full Text
View/download PDF

42. Moscato Cerletti, a rediscovered aromatic cultivar with oenological potential in warm and dry areas

Author

Sparacio, Antonio, primary, Mercati, Francesco, additional, Sciara, Filippo, additional, Pisciotta, Antonino, additional, Capraro, Felice, additional, Sparla, Salvatore, additional, Abbate, Loredana, additional, Mauceri, Antonio, additional, Planeta, Diego, additional, Corona, Onofrio, additional, Crespan, Manna, additional, Sunseri, Francesco, additional, and Barbagallo, Maria Gabriella, additional

Published
2021
Full Text
View/download PDF

49. A. Making Wine in Western-Mediterranean B. Production and the Trade of Amphorae: Some New Data from Italy

Author

Brun, Jean-Pierre, Garnier, Nicolas, Olcese, Gloria, De Lorenzis, Gabriella, Mercati, Francesco, Bergamini, Carlo, Cardone, Maria Francesca, Barbagallo, Maria Gabriella, Sunseri, Francesco, Brancadoro, Lucio, Scienza, Attilio, Failla, Osvaldo, Bouby, Laurent, Ramos-Madrigal, Jazmín, Wiborg Runge, Anne Kathrine, Lacombe, Thierry, Bonhomme, Vincent, Ivorra, Sarah, Samaniego Castruita, José Alfredo, Bacilieri, Roberto, Pius Gilbert, Marcus Thomas, Terral, Jean-Frédéric, Wales, Nathan, Razza, Andrea, Surace, Domenico Michele, Depalmas, Anna, Loi, Cinzia, Pecci, Alessandra, Peña Cervantes, Yolanda, Anastasi, Maxine, Toniolo, Luana, Rizzo, Giorgio, Moreno Megías, Violeta, Carrato, Charlotte, Ichkhakh, Abdelfattah, Kbiri Alaoui, Mohamed, Rocca, Elsa, Ruas, Marie-Pierre, Alilou, M’Ahmed, Mathieu, Véronique, Sanz-Laliberte, Séverine, Pineau, Jean-Baptiste, and Martínez Valle, Asunción

Published
2020
Full Text
View/download PDF

Catalog

Books, media, physical & digital resources
See catalog results