1. HEXIM1 and NEAT1 Long Non-coding RNA Form a Multi-subunit Complex that Regulates DNA-Mediated Innate Immune Response
- Author
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Yamina Bennasser, Monsef Benkirane, Sonia Amraoui, Mehdi Morchikh, Julien Cau, Dany Severac, Olivier Schwartz, Alexandra Cribier, Raoul Raffel, Emeric Dubois, Institut de génétique humaine (IGH), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Virus et Immunité, Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris], Institut de Génomique Fonctionnelle - Montpellier GenomiX (IGF MGX), Institut de Génomique Fonctionnelle (IGF), Université de Montpellier (UM)-Université Montpellier 1 (UM1)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Montpellier 2 - Sciences et Techniques (UM2)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Université Montpellier 1 (UM1)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Montpellier 2 - Sciences et Techniques (UM2)-Centre National de la Recherche Scientifique (CNRS), This work was supported by grants from the ANRS, European FP7 'HIT HIDDEN HIV' contract 305762 and MSDavenir. M.M. was supported by European FP7 'HIT HIDDEN HIV' contract 305762 and by foundation Bettencourt Schueller and A.C. was supported by SIDACTION., European Project: 305762,HEALTH,FP7-HEALTH-2012-INNOVATION-1,HIT HIDDEN HIV(2012), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-BioCampus (BCM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), and Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
- Subjects
0301 basic medicine ,MESH: Signal Transduction ,Ku80 ,[SDV]Life Sciences [q-bio] ,paraspeckles ,RNA-binding protein ,MESH: Calcium-Binding Proteins ,HEXIM1 ,MESH: Interferon Regulatory Factor-3 ,Nuclear Matrix-Associated Proteins ,RNA interference ,MESH: Nucleotidyltransferases ,MESH: Ku Autoantigen ,MESH: Human Umbilical Vein Endothelial Cells ,Genetics ,Ku70 ,Intracellular Signaling Peptides and Proteins ,MESH: DNA ,Nuclear Proteins ,RNA-Binding Proteins ,Nucleotidyltransferases ,3. Good health ,Cell biology ,DNA-Binding Proteins ,MESH: RNA, Long Noncoding ,MESH: HEK293 Cells ,Herpesvirus 8, Human ,Host-Pathogen Interactions ,Octamer Transcription Factors ,RNA Interference ,RNA, Long Noncoding ,MESH: Immunity, Innate ,MESH: Octamer Transcription Factors ,MESH: Membrane Proteins ,Protein Binding ,Signal Transduction ,interferon stimulatory DNA ,MESH: RNA Interference ,NEAT1 ,MESH: PTB-Associated Splicing Factor ,Biology ,Transfection ,DNA-PK ,03 medical and health sciences ,herpesvirus ,MESH: Intracellular Signaling Peptides and Proteins ,Human Umbilical Vein Endothelial Cells ,Humans ,MESH: Protein Binding ,PTB-Associated Splicing Factor ,Molecular Biology ,Ku Autoantigen ,MESH: Herpesvirus 8, Human ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Innate immune system ,MESH: Humans ,MESH: Transfection ,Calcium-Binding Proteins ,MESH: Host-Pathogen Interactions ,RNA ,Membrane Proteins ,Paraspeckle ,Cell Biology ,DNA ,MESH: Multiprotein Complexes ,Immunity, Innate ,MESH: Nuclear Matrix-Associated Proteins ,030104 developmental biology ,HEK293 Cells ,MESH: RNA-Binding Proteins ,Multiprotein Complexes ,MESH: HeLa Cells ,innate immune response ,Interferon Regulatory Factor-3 ,IRF3 ,MESH: Nuclear Proteins ,HeLa Cells ,Transcription Factors ,cGAS - Abstract
International audience; The DNA-mediated innate immune response underpins anti-microbial defenses and certain autoimmune diseases. Here we used immunoprecipitation, mass spectrometry, and RNA sequencing to identify a ribonuclear complex built around HEXIM1 and the long non-coding RNA NEAT1 that we dubbed the HEXIM1-DNA-PK-paraspeckle components-ribonucleoprotein complex (HDP-RNP). The HDP-RNP contains DNA-PK subunits (DNAPKc, Ku70, and Ku80) and paraspeckle proteins (SFPQ, NONO, PSPC1, RBM14, and MATRIN3). We show that binding of HEXIM1 to NEAT1 is required for its assembly. We further demonstrate that the HDP-RNP is required for the innate immune response to foreign DNA, through the cGAS-STING-IRF3 pathway. The HDP-RNP interacts with cGAS and its partner PQBP1, and their interaction is remodeled by foreign DNA. Remodeling leads to the release of paraspeckle proteins, recruitment of STING, and activation of DNAPKc and IRF3. Our study establishes the HDP-RNP as a key nuclear regulator of DNA-mediated activation of innate immune response through the cGAS-STING pathway.
- Published
- 2017
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