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1. Severity and Number of Substances Used are Independently Associated with Antiretroviral Therapy Adherence Over Time among People with HIV in the Current Treatment Era

Author: Ma, Jimmy, Delaney, Joseph A. C., Ruderman, Stephanie A., Nance, Robin M., Hahn, Andrew W., Drumright, Lydia N., Whitney, Bridget M., Fredericksen, Rob J., Mixson, L. Sarah, Merrill, Joseph O., Safren, Steven A., Mayer, Kenneth H., O’Cleirigh, Conall, Napravnik, Sonia, Chander, Geetanjali, Moore, Richard D., Christopoulos, Katerina A., Willig, Amanda L., Bamford, Laura, Webel, Allison, McCaul, Mary E., Cachay, Edward R., Jacobson, Jeffrey M., Saag, Michael S., Kitahata, Mari M., Crane, Heidi M., and Williams, Emily C.
Published: 2025
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2. Correction: Severity and Number of Substances Used are Independently Associated with Antiretroviral Therapy Adherence Over Time Among People with HIV in the Current Treatment Era

Author: Ma, Jimmy, Delaney, Joseph A. C., Ruderman, Stephanie A., Nance, Robin M., Hahn, Andrew W., Drumright, Lydia N., Whitney, Bridget M., Fredericksen, Rob J., Mixson, L. Sarah, Merrill, Joseph O., Safren, Steven A., Mayer, Kenneth H., O’Cleirigh, Conall, Napravnik, Sonia, Chander, Geetanjali, Moore, Richard D., Christopoulos, Katerina A., Willig, Amanda L., Bamford, Laura, Webel, Allison, McCaul, Mary E., Cachay, Edward R., Jacobson, Jeffrey M., Saag, Michael S., Kitahata, Mari M., Crane, Heidi M., and Williams, Emily C.
Published: 2025
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3. Associations between alcohol and cigarette use and type 1 and 2 myocardial infarction among people with HIV.

Author: Drumright, Lydia, Nance, Robin, Ruderman, Stephanie, Ma, Jimmy, Whitney, Bridget, Hahn, Andrew, Fredericksen, Rob, Luu, Brandon, Lober, William, Moore, Richard, Budoff, Matthew, Keruly, Jeanne, Christopoulos, Katerina, Puryear, Sarah, Willig, Amanda, Cropsey, Karen, Mathews, Christopher, Cachay, Edward, Bamford, Laura, Eron, Joseph, Napravnik, Sonia, Mayer, Kenneth, OCleirigh, Conall, Mccaul, Mary, Chander, Geetanjali, Feinstein, Matthew, Saag, Michael, Kitahata, Mari, Heckbert, Susan, Crane, Heidi, and Delaney, Joseph
Subjects: HIV, alcohol use, binge drinking, people with HIV, smoking, type 1 myocardial infarction, type 2 myocardial infarction, Male, Humans, Female, HIV Infections, Myocardial Infarction, Risk Factors, Plaque, Atherosclerotic, Tobacco Products
Abstract: OBJECTIVES: People with HIV have a higher risk of myocardial infarction (MI) than the general population, with a greater proportion of type 2 MI (T2MI) due to oxygen demand-supply mismatch compared with type 1 (T1MI) resulting from atherothrombotic plaque disruption. People living with HIV report a greater prevalence of cigarette and alcohol use than do the general population. Alcohol use and smoking as risk factors for MI by type are not well studied among people living with HIV. We examined longitudinal associations between smoking and alcohol use patterns and MI by type among people living with HIV. DESIGN AND METHODS: Using longitudinal data from the Centers for AIDS Research Network of Integrated Clinical Systems cohort, we conducted time-updated Cox proportional hazards models to determine the impact of smoking and alcohol consumption on adjudicated T1MI and T2MI. RESULTS: Among 13 506 people living with HIV, with a median 4 years of follow-up, we observed 177 T1MI and 141 T2MI. Current smoking was associated with a 60% increase in risk of both T1MI and T2MI. In addition, every cigarette smoked per day was associated with a 4% increase in risk of T1MI, with a suggestive, but not significant, 2% increase for T2MI. Cigarette use had a greater impact on T1MI for men than for women and on T2MI for women than for men. Increasing alcohol use was associated with a lower risk of T1MI but not T2MI. Frequency of heavy episodic alcohol use was not associated with MI. CONCLUSIONS: Our findings reinforce the prioritization of smoking reduction, even without cessation, and cessation among people living with HIV for MI prevention and highlight the different impacts on MI type by gender.
Published: 2023

4. Sexual identity, sexual behavior, and drug use behaviors among people who use drugs in the rural U.S.

Author: Jenkins, Wiley D., Beach, Lauren B., Schneider, John, Friedman, Samuel R., Pho, Mai T., Walters, Suzan, Ezell, Jerel, Young, April M., Hennessy, Caitie, Miller, William C., Go, Vivian F., Sun, Christina, Seal, David W., Westergaard, Ryan P., Crane, Heidi M., Fredericksen, Rob J., Ruderman, Stephanie A., Fletcher, Scott, Ma, Jimmy, Delaney, J.A., Plaisance, Karma, Feinberg, Judith, Smith, Gordon S., Korthuis, P. Todd, Stopka, Thomas J., Friedmann, Peter D., Zule, William, and Winer, Mike
Published: 2025
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5. Associations between drug and alcohol use, smoking, and frailty among people with HIV across the United States in the current era of antiretroviral treatment.

Author: Greene, Meredith, Hahn, Andrew, Eron, Joseph, Napravnik, Sonia, Mathews, William, Chander, Geetanjali, McCaul, Mary, Cachay, Edward, Mayer, Kenneth, Landay, Alan, Austad, Steven, Ma, Jimmy, Kritchevsky, Stephen, Pandya, Chintan, Achenbach, Chad, Cartujano-Barrera, Francisco, Kitahata, Mari, Delaney, Joseph, Kamen, Charles, Crane, Heidi, Ruderman, Stephanie, Whitney, Bridget, Nance, Robin, Drumright, Lydia, Webel, Allison, Willig, Amanda, Saag, Michael, and Christopoulos, Katerina
Subjects: Alcohol use, Cigarette smoking, Frailty, HIV, Methamphetamine use, Substance use, Humans, Aged, United States, Frailty, Frail Elderly, Geriatric Assessment, Analgesics, Opioid, HIV Infections, Methamphetamine, Cocaine, Smoking
Abstract: OBJECTIVE: To examine associations between frailty and drug, alcohol, and tobacco use among a large diverse cohort of people with HIV (PWH) in clinical care in the current era. METHODS: PWH at 7 sites across the United States completed clinical assessments of patient-reported measures and outcomes between 2016 and 2019 as part of routine care including drug and alcohol use, smoking, and other domains. Frailty was assessed using 4 of the 5 components of the Fried frailty phenotype and PWH were categorized as not frail, pre-frail, or frail. Associations of substance use with frailty were assessed with multivariate Poisson regression. RESULTS: Among 9336 PWH, 43% were not frail, 44% were prefrail, and 13% were frail. Frailty was more prevalent among women, older PWH, and those reporting current use of drugs or cigarettes. Current methamphetamine use (1.26: 95% CI 1.07-1.48), current (1.65: 95% CI 1.39-1.97) and former (1.21:95% CI 1.06-1.36) illicit opioid use, and former cocaine/crack use (1.17: 95% CI 1.01-1.35) were associated with greater risk of being frail in adjusted analyses. Current smoking was associated with a 61% higher risk of being frail vs. not frail (1.61: 95% CI 1.41-1.85) in adjusted analyses. CONCLUSIONS: We found a high prevalence of prefrailty and frailty among a nationally distributed cohort of PWH in care. This study identified distinct risk factors that may be associated with frailty among PWH, many of which, such as cigarette smoking and drug use, are potentially modifiable.
Published: 2022

6. Tobacco smoking and binge alcohol use are associated with incident venous thromboembolism in an HIV cohort.

Author: Luu, Brandon, Ruderman, Stephanie, Nance, Robin, Delaney, Joseph AC, Ma, Jimmy, Hahn, Andrew, Heckbert, Susan R, Budoff, Matthew J, Crothers, Kristina, Mathews, William C, Christopolous, Katerina, Hunt, Peter W, Eron, Joseph, Moore, Richard, Keruly, Jeanne, Lober, William B, Burkholder, Greer A, Willig, Amanda, Chander, Geetanjali, McCaul, Mary E, Cropsey, Karen, O'Cleirigh, Conall, Peter, Inga, Feinstein, Matthew, Tsui, Judith I, Lindstroem, Sara, Saag, Michael, Kitahata, Mari M, Crane, Heidi M, Drumright, Lydia N, and Whitney, Bridget M
Subjects: Humans, HIV Infections, Ethanol, Proportional Hazards Models, Risk Factors, Prospective Studies, Venous Thromboembolism, Binge Drinking, Tobacco Smoking, HIV, binge drinking, smoking, substance use, venous thromboembolism, Substance Misuse, Alcoholism, Alcohol Use and Health, Tobacco Smoke and Health, Prevention, Clinical Research, HIV/AIDS, Tobacco, Prevention of disease and conditions, and promotion of well-being, 3.1 Primary prevention interventions to modify behaviours or promote wellbeing, Cancer, Stroke, Cardiovascular, Respiratory, Good Health and Well Being, Clinical Sciences, Virology
Abstract: BackgroundPeople with HIV (PWH) are at increased risk of cardiovascular comorbidities and substance use is a potential predisposing factor. We evaluated associations of tobacco smoking and alcohol use with venous thromboembolism (VTE) in PWH.MethodsWe assessed incident, centrally adjudicated VTE among 12 957 PWH within the Centers for AIDS Research Network of Integrated Clinical Systems (CNICS) cohort between January 2009 and December 2018. Using separate Cox proportional hazards models, we evaluated associations of time-updated alcohol and cigarette use with VTE, adjusting for demographic and clinical characteristics. Smoking was evaluated as pack-years and never, former, or current use with current cigarettes per day. Alcohol use was parameterized using categorical and continuous alcohol use score, frequency of use, and binge frequency.ResultsDuring a median of 3.6 years of follow-up, 213 PWH developed a VTE. One-third of PWH reported binge drinking and 40% reported currently smoking. In adjusted analyses, risk of VTE was increased among both current (HR: 1.44, 95% CI: 1.02-2.03) and former (HR: 1.44, 95% CI: 0.99-2.07) smokers compared to PWH who never smoked. Additionally, total pack-years among ever-smokers (HR: 1.10 per 5 pack-years; 95% CI: 1.03-1.18) was associated with incident VTE in a dose-dependent manner. Frequency of binge drinking was associated with incident VTE (HR: 1.30 per 7 days/month, 95% CI: 1.11-1.52); however, alcohol use frequency was not. Severity of alcohol use was not significantly associated with VTE.ConclusionsCurrent smoking and pack-year smoking history were dose-dependently associated with incident VTE among PWH in CNICS. Binge drinking was also associated with VTE. Interventions for smoking and binge drinking may decrease VTE risk among PWH.
Published: 2022

7. Current Antiretroviral Treatment Among People With Human Immunodeficiency Virus in the United States: Findings from the Centers for AIDS Research Network of Integrated Clinic Systems Cohort

Author: Ma, Jimmy, Nance, Robin M, Delaney, Joseph AC, Whitney, Bridget M, Bamford, Laura, Gravett, Ronnie M, Moore, Richard D, Napravnik, Sonia, Mayer, Kenneth H, Jacobson, Jeffrey M, Christopoulos, Katerina, Burkholder, Greer A, Keruly, Jeanne, Eron, Joseph J, Martin, Jeffrey, Cachay, Edward R, Saag, Michael S, Crane, Heidi M, and Kitahata, Mari M
Subjects: Medical Microbiology, Biomedical and Clinical Sciences, Sexually Transmitted Infections, HIV/AIDS, Infectious Diseases, Infection, Good Health and Well Being, Acquired Immunodeficiency Syndrome, Alanine, Anti-HIV Agents, Anti-Retroviral Agents, Emtricitabine, HIV, HIV Infections, Heterocyclic Compounds, 3-Ring, Humans, Tenofovir, United States, ART utilization, ART treatment trends, ART guidelines, integrase inhibitor, tenofovir alafenamide, Biological Sciences, Medical and Health Sciences, Microbiology, Clinical sciences
Abstract: Among 14 049 people with human immunodeficiency virus in care in 2019-2020, 96% were treated with antiretroviral therapy (ART). Current antiretroviral treatment patterns highlight high uptake of guideline-recommended ART regimens including second-generation integrase strand transfer inhibitors (dolutegravir and bictegravir) and tenofovir alafenamide, especially in antiretroviral-naive individuals initiating ART.
Published: 2022

8. Differences in internalized HIV stigma across subpopulations of people with HIV in care across the United States

Author: Drumright, Lydia N., Johnson, Mallory O., Mayer, Kenneth H., Christopoulos, Katerina, Cachay, Edward, Crawford, Timothy N., Whitney, Bridget M., Dai, Mindy, Ruderman, Stephanie A., Mixson, L. Sarah, Keruly, Jeanne C., Chander, Geetanjali, Saag, Michael S., Kitahata, Mari M., Moore, Richard D., Willig, Amanda L., Eron, Joseph J., Napravnik, Sonia, Nance, Robin M., Hahn, Andrew, Ma, Jimmy, Bamford, Laura, Fredericksen, Rob J., Delaney, Joseph A.C., and Crane, Heidi M.
Published: 2024
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9. Associations of hepatitis C virus (HCV) antibody positivity with opioid, stimulant, and polysubstance injection among people who inject drugs (PWID) in rural U.S. communities

Author: Estadt, Angela T., Miller, William C., Kline, David, Whitney, Bridget M., Young, April M., Todd Korthuis, P., Stopka, Thomas J., Feinberg, Judith, Zule, William A., Pho, Mai T., Friedmann, Peter D., Westergaard, Ryan P., Eagen, Kellene V., Seaman, Andrew, Ma, Jimmy, Go, Vivian F., and Lancaster, Kathryn E.
Published: 2023
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10. Development of Frail RISC-HIV: a Risk Score for Predicting Frailty Risk in the Short-term for Care of People with HIV

Author: Ruderman, Stephanie A., Nance, Robin M., Drumright, Lydia N., Whitney, Bridget M., Hahn, Andrew W., Ma, Jimmy, Haidar, Lara, Eltonsy, Sherif, Mayer, Kenneth H., Eron, Joseph J., Greene, Meredith, Mathews, William C., Webel, Allison, Saag, Michael S., Willig, Amanda L., Kamen, Charles, McCaul, Mary, Chander, Geetanjali, Cachay, Edward, Lober, William B., Pandya, Chintan, Cartujano-Barrera, Francisco, Kritchevsky, Stephen B., Austad, Steven N., Landay, Alan, Kitahata, Mari M., Crane, Heidi M., and Delaney, Joseph A.C.
Published: 2023
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11. Smoking and Type 1 Versus Type 2 Myocardial Infarction Among People With HIV in the United States: Results from the Center for AIDS Research Network Integrated Clinical Systems Cohort.

Author: Crane, Heidi M., Nance, Robin M., Ruderman, Stephanie A., Drumright, Lydia N., Mixson, L. Sarah, Heckbert, Susan R., Feinstein, Matthew J., Budoff, Matthew J., Bamford, Laura, Cachay, Edward, Napravnik, Sonia, Moore, Richard D., Keruly, Jeanne, Willig, Amanda L., Burkholder, Greer A., Hahn, Andrew, Ma, Jimmy, Fredericksen, Rob, Saag, Michael S., and Chander, Geetanjali
Abstract: Smoking is a myocardial infarction (MI) risk factor among people with HIV (PWH). Questions persist regarding the role of smoking behaviors and measurements (e.g., intensity, duration) on MI risk. We used Cox proportional hazards regression to compare the association of smoking parameterization with incidents of type 1 and type 2MI and whether smoking intensity or duration improves MI risk prediction among PWH. Among 11,637 PWH, 37% reported currently smoking, and there were 346 MIs. Current smoking was associated with type 1 (84% increased risk) but not type 2MI in adjusted analyses. The type 1MI model with pack years had the best goodness of fit compared with other smoking parameterizations. Ever or never parameterization and smoking diagnosis data had significantly poorer model fit. These results highlight the importance of differentiating MI types and performing patient-based smoking assessments to improve HIV care and research rather than relying on smoking status from diagnoses. [ABSTRACT FROM AUTHOR]
Published: 2024
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12. Severe COVID-19 initially presenting as mesenteric adenopathy

Author: Noda, Sakura, Ma, Jimmy, Romberg, Erin K., Hernandez, Rafael E., and Ferguson, Mark R.
Published: 2021
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13. Evaluating the Sick Quitting Hypothesis for Frailty Status and Reducing Alcohol Use Among People With HIV in a Longitudinal Clinical Cohort Study

Author: Ruderman, Stephanie A., primary, Drumright, Lydia N., additional, Delaney, Joseph A. C., additional, Webel, Allison R., additional, Fitzpatrick, Annette L., additional, Whitney, Bridget M., additional, Nance, Robin M., additional, Hahn, Andrew W., additional, Ma, Jimmy, additional, Mixson, L. Sarah, additional, Eltonsy, Sherif, additional, Willig, Amanda L., additional, Mayer, Kenneth H., additional, Napravnik, Sonia, additional, Greene, Meredith, additional, McCaul, Mary, additional, Cachay, Edward, additional, Kritchevsky, Stephen B., additional, Austad, Steven N., additional, Landay, Alan, additional, Saag, Michael S., additional, Kitahata, Mari M., additional, Lau, Bryan, additional, Lesko, Catherine, additional, Chander, Geetanjali, additional, Crane, Heidi M., additional, and Odden, Michelle C., additional
Published: 2024
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14. CMV and HSV Pneumonia After Immunosuppressive Agents for Treatment of Cytokine Release Syndrome Due to Chimeric Antigen Receptor–modified T (CAR-T)-Cell Immunotherapy

Author: Heldman, Madeleine R., Ma, Jimmy, Gauthier, Jordan, O’Hara, Riley A., Cowan, Andrew J., Yoke, Leah M., So, Lisa, Gulleen, Elizabeth, Duke, Elizabeth R., Liu, Catherine, Turtle, Cameron J., and Hill, Joshua A.
Published: 2021
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15. Venous thromboembolism among people with HIV: Design, implementation, and findings of a centralized adjudication system in clinical care sites across the United States

Author: Crane, Heidi M, primary, Nance, Robin M, additional, Ruderman, Stephanie A, additional, Haidar, Lara, additional, Tenforde, Mark W, additional, Heckbert, Susan R, additional, Budoff, Matthew J, additional, Hahn, Andrew W, additional, Drumright, Lydia N., additional, Ma, Jimmy, additional, Mixson, L. S., additional, Lober, William B, additional, Barnes, Gregory S, additional, McReynolds, Justin, additional, Attia, Engi F, additional, Peter, Inga, additional, Moges, Tesfaye, additional, Bamford, Laura, additional, Cachay, Edward, additional, Mathews, William C, additional, Christopolous, Katerina, additional, Hunt, Peter W, additional, Napravnik, Sonia, additional, Keruly, Jeanne, additional, Moore, Richard D, additional, Burkholder, Greer, additional, Willig, Amanda L, additional, Lindstrom, Sara, additional, Whitney, Bridget M, additional, Saag, Michael S, additional, Kitahata, Mari M, additional, Crothers, Kristina A, additional, and Delaney, Joseph AC, additional
Published: 2023
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16. Tobacco Smoking and Pack-Years Are Associated With Frailty Among People With HIV

Author: Ruderman, Stephanie A., primary, Odden, Michelle C, additional, Webel, Allison R., additional, Fitzpatrick, Annette L., additional, Crane, Paul K., additional, Nance, Robin M., additional, Drumright, Lydia N., additional, Whitney, Bridget M., additional, Mixson, Lyndsey Sarah, additional, Ma, Jimmy, additional, Willig, Amanda L., additional, Haidar, Lara, additional, Eltonsy, Sherif, additional, Mayer, Kenneth H., additional, O'Cleirigh, Conall, additional, Cropsey, Karen L., additional, Eron, Joseph J., additional, Napravnik, Sonia, additional, Greene, Meredith, additional, McCaul, Mary, additional, Chander, Geetanjali, additional, Cachay, Edward, additional, Lober, William B., additional, Kritchevsky, Stephen B., additional, Austad, Steven, additional, Landay, Alan, additional, Pandya, Chintan, additional, Cartujano-Barrera, Francisco, additional, Saag, Michael S., additional, Kamen, Charles, additional, Hahn, Andrew W., additional, Kitahata, Mari M., additional, Delaney, Joseph A. C., additional, and Crane, Heidi M., additional
Published: 2023
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17. Changes in marijuana use and associated attitudes and health behaviors among patients in HIV care in the U.S. in the post-legalization era: a qualitative study

Author: Fredericksen Rob, Fitzsimmons Emma, Sigal Maksim, Dougherty Sarah, Pearce John, Powell Minh, Nguyen John, Ruderman Stephanie, Whitney Bridget, Drumright Lydia, Ma Jimmy, Nance Robin, Mixson Sarah, Delaney Joseph, Mayer Kenneth, Willig Amanda, Crane Heidi, and Hahn Andrew
Subjects: General Medicine
Published: 2023
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18. Associations between alcohol and cigarette use and type 1 and 2 myocardial infarction among people with HIV

Author: Drumright, Lydia N, Nance, Robin M, Ruderman, Stephanie A, Ma, Jimmy, Whitney, Bridget M, Hahn, Andrew, Fredericksen, Rob J, Luu, Brandon, Lober, William B, Moore, Richard D, Budoff, Matthew J, Keruly, Jeanne C, Christopoulos, Katerina, Puryear, Sarah, Willig, Amanda, Cropsey, Karen, Mathews, William C, Cachay, Edward, Bamford, Laura, Eron, Joseph J, Napravnik, Sonia, Mayer, Kenneth H, O'Cleirigh, Conall, Mccaul, Mary E, Chander, Geetanjali, Feinstein, Matthew J, Saag, Michael S, Kitahata, Mari M, Heckbert, Susan R, Crane, Heidi M, Delaney, Joseph AC, Drumright, Lydia N [0000-0002-3361-8080], Nance, Robin M [0000-0002-4412-4844], Ruderman, Stephanie A [0000-0002-0058-5729], Ma, Jimmy [0000-0002-6849-3206], Whitney, Bridget M [0000-0002-3738-5704], Hahn, Andrew [0000-0002-9552-1700], Fredericksen, Rob J [0000-0003-3936-7048], Luu, Brandon [0000-0002-7203-5283], Lober, William B [0000-0002-1053-7501], Moore, Richard D [0000-0001-8250-5069], Budoff, Matthew J [0000-0002-9616-1946], Keruly, Jeanne C [0000-0002-8489-435X], Christopoulos, Katerina [0000-0002-8598-2191], Puryear, Sarah [0000-0003-0669-3293], Willig, Amanda [0000-0001-8802-4311], Cropsey, Karen [0000-0001-6921-3440], Mathews, William C [0000-0002-2352-0725], Cachay, Edward [0000-0002-2452-7558], Bamford, Laura [0000-0001-5988-8372], Eron, Joseph J [0000-0002-4938-0644], Napravnik, Sonia [0000-0002-9032-3713], Mayer, Kenneth H [0000-0001-7460-733X], O'Cleirigh, Conall [0000-0002-5639-5043], Mccaul, Mary E [0000-0003-2009-4115], Chander, Geetanjali [0000-0002-2216-6330], Feinstein, Matthew J [0000-0002-8958-7666], Saag, Michael S [0000-0002-8866-1043], Kitahata, Mari M [0000-0002-5410-7175], Heckbert, Susan R [0000-0002-7100-512X], Crane, Heidi M [0000-0002-3308-7005], Delaney, Joseph AC [0000-0003-1771-1776], and Apollo - University of Cambridge Repository
Subjects: Male, Myocardial Infarction, HIV, HIV Infections, Tobacco Products, alcohol use, people with HIV, binge drinking, smoking, Plaque, Atherosclerotic, type 2 myocardial infarction, Risk Factors, Humans, Female, type 1 myocardial infarction
Abstract: Funder: National Institutes of Health; Id: http://dx.doi.org/10.13039/100000002, OBJECTIVES: People with HIV have a higher risk of myocardial infarction (MI) than the general population, with a greater proportion of type 2 MI (T2MI) due to oxygen demand-supply mismatch compared with type 1 (T1MI) resulting from atherothrombotic plaque disruption. People living with HIV report a greater prevalence of cigarette and alcohol use than do the general population. Alcohol use and smoking as risk factors for MI by type are not well studied among people living with HIV. We examined longitudinal associations between smoking and alcohol use patterns and MI by type among people living with HIV. DESIGN AND METHODS: Using longitudinal data from the Centers for AIDS Research Network of Integrated Clinical Systems cohort, we conducted time-updated Cox proportional hazards models to determine the impact of smoking and alcohol consumption on adjudicated T1MI and T2MI. RESULTS: Among 13 506 people living with HIV, with a median 4 years of follow-up, we observed 177 T1MI and 141 T2MI. Current smoking was associated with a 60% increase in risk of both T1MI and T2MI. In addition, every cigarette smoked per day was associated with a 4% increase in risk of T1MI, with a suggestive, but not significant, 2% increase for T2MI. Cigarette use had a greater impact on T1MI for men than for women and on T2MI for women than for men. Increasing alcohol use was associated with a lower risk of T1MI but not T2MI. Frequency of heavy episodic alcohol use was not associated with MI. CONCLUSIONS: Our findings reinforce the prioritization of smoking reduction, even without cessation, and cessation among people living with HIV for MI prevention and highlight the different impacts on MI type by gender.
Published: 2023
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19. Venous Thromboembolism Among People With HIV: Design, Implementation, and Findings of a Centralized Adjudication System in Clinical Care Sites Across the United States.

Author: Crane, Heidi M., Nance, Robin M., Ruderman, Stephanie A., Haidar, Lara, Tenforde, Mark W., Heckbert, Susan R., Budoff, Matthew J., Hahn, Andrew W., Drumright, Lydia N., Ma, Jimmy, Mixson, L. S., Lober, William B., Barnes, Gregory S., McReynolds, Justin, Attia, Engi F., Peter, Inga, Moges, Tesfaye, Bamford, Laura, Cachay, Edward, and Mathews, William C.
Published: 2024
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20. Associations between drug and alcohol use, smoking, and frailty among people with HIV across the United States in the current era of antiretroviral treatment

Author: Crane, Heidi M., primary, Ruderman, Stephanie A, additional, Whitney, Bridget M, additional, Nance, Robin M, additional, Drumright, Lydia N., additional, Webel, Allison R., additional, Willig, Amanda L., additional, Saag, Michael S., additional, Christopoulos, Katerina, additional, Greene, Meredith, additional, Hahn, Andrew W., additional, Eron, Joseph J., additional, Napravnik, Sonia, additional, Mathews, William Christopher, additional, Chander, Geetanjali, additional, McCaul, Mary E., additional, Cachay, Edward R., additional, Mayer, Kenneth H., additional, Landay, Alan, additional, Austad, Steven, additional, Ma, Jimmy, additional, Kritchevsky, Stephen B., additional, Pandya, Chintan, additional, Achenbach, Chad, additional, Cartujano-Barrera, Francisco, additional, Kitahata, Mari, additional, Delaney, Joseph AC, additional, and Kamen, Charles, additional
Published: 2022
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21. Vaporized Nicotine (E-Cigarette) and Tobacco Smoking Among People With HIV: Use Patterns and Associations With Depression and Panic Symptoms.

Author: Hahn, Andrew W., Ruderman, Stephanie A., Nance, Robin M., Whitney, Bridget W., Eltonsy, Sherif, Haidar, Lara, Delaney, Joseph A. C., Drumright, Lydia N., Ma, Jimmy, Mayer, Kenneth H., 'Cleirigh, Conall O., Napravnik, Sonia, Eron, Joseph J., Christopoulos, Katerina, Bamford, Laura, Cachay, Edward, Jacobson, Jeffrey M., Willig, Amanda, Cropsey, Karen, and Chander, Geetanjali
Published: 2023
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22. Deep Learning with Accelerated Execution: A Real-Time License Plate Localisation System

Author: Ma, Jimmy, primary and Salcic, Zoran, additional
Published: 2021
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23. Fatal infection with enterocolitis from methicillin-resistant Staphylococcus aureus and the continued value of culture in the era of molecular diagnostics

Author: Bhattacharyya, Pooja, primary, Bryan, Andrew, additional, Atluri, Vidya, additional, Ma, Jimmy, additional, Durowoju, Lindsey, additional, Bandhlish, Anshu, additional, and Boonyaratanakornkit, Jim, additional
Published: 2021
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24. Severe COVID-19 initially presenting as mesenteric adenopathy

Author: Noda, Sakura, primary, Ma, Jimmy, additional, Romberg, Erin K., additional, Hernandez, Rafael E., additional, and Ferguson, Mark R., additional
Published: 2020
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25. Supplemental material for Hepatitis C care cascade in HIV patients at an urban clinic in the early direct-acting antiviral era

Author: Ma, Jimmy, Non, Lemuel, Surachai Amornsawadwattana, Olsen, Margaret A, Wilson, Alexandria Garavaglia, and Presti, Rachel M
Subjects: education, 110309 Infectious Diseases, FOS: Health sciences
Abstract: Supplemental Material for Hepatitis C care cascade in HIV patients at an urban clinic in the early direct-acting antiviral era by Jimmy Ma, Lemuel Non, Surachai Amornsawadwattana, Margaret A Olsen, Alexandria Garavaglia Wilson and Rachel M Presti in International Journal of STD & AIDS
Published: 2019
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26. Hepatitis C care cascade in HIV patients at an urban clinic in the early direct-acting antiviral era

Author: Ma, Jimmy, primary, Non, Lemuel, additional, Amornsawadwattana, Surachai, additional, Olsen, Margaret A, additional, Garavaglia Wilson, Alexandria, additional, and Presti, Rachel M, additional
Published: 2019
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27. Current management of Clostridioides (Clostridium) difficile infection in adults: a summary of recommendations from the 2017 IDSA/SHEA clinical practice guideline

Author: Ma, Jimmy, primary and Dubberke, Erik, additional
Published: 2018
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28. 2253. Comparison of Cardiovascular Risk in Patients Infected With HIV and Hepatitis C

Author: Ma, Jimmy, primary, Salter, Amber, additional, Presti, Rachel, additional, and Korenblat, Kevin, additional
Published: 2018
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29. Current management of Clostridioides (Clostridium) difficile infection in adults: a summary of recommendations from the 2017 IDSA/SHEA clinical practice guideline.

Author: Ma, Jimmy and Dubberke, Erik
Published: 2019

30. COMORBIDITIES AND SYMPTOMS ASSOCIATED WITH FALLS: 2020-2021.

Author: Drumright, Lydia, Ruderman, Stephanie, Willig, Amanda, Whitney, Bridget M., Nance, Robin, Hahn, Andrew, Mixson, Sarah, Ma, Jimmy, Fredericksen, Rob, Jacobson, Jeff, Christopoulos, Katerina, Napravnik, Sonia, Cachay, Edward R., Webel, Allison, and Crane, Heidi
Published: 2023

31. Cumulative HIV viral load and lower CD4 cell count are associated with incident venous thromboembolism in people with HIV

Author: Ruderman, Stephanie A., Nance, Robin M., Crane, Heidi M., Cachay, Edward, Kitahata, Mari M., Napravnik, Sonia, Whitney, Bridget M., Heckbert, Susan R., Attia, Engi F., Longenecker, Chris T., Hoffmann, Alexander P., Budoff, Matthew J., Ma, Jimmy, Christopoulos, Katerina, Hunt, Peter W., Moore, Richard D., Keruly, Jeanne C., Burkholder, Greer, Bamford, Laura, Willig, Amanda L., Chander, Geetanjali, Saag, Michael S., Drumright, Lydia N., Feinstein, Matthew J., Crothers, Kristina, and Delaney, Joseph AC.
Published: 2024
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32. The Care Cascade of Hepatitis C Management With Direct-Acting Antivirals in HIV-Infected Individuals

Author: Non, Lemuel, primary, Ma, Jimmy, additional, Amornsawadwattana, Surachai, additional, Garavaglia-Wilson, Alexandria, additional, and Presti, Rachel, additional
Published: 2016
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33. Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution

Author: Leung, Wilson, primary, Shaffer, Christopher D, additional, Reed, Laura K, additional, Smith, Sheryl T, additional, Barshop, William, additional, Dirkes, William, additional, Dothager, Matthew, additional, Lee, Paul, additional, Wong, Jeannette, additional, Xiong, David, additional, Yuan, Han, additional, Bedard, James E J, additional, Machone, Joshua F, additional, Patterson, Seantay D, additional, Price, Amber L, additional, Turner, Bryce A, additional, Robic, Srebrenka, additional, Luippold, Erin K, additional, McCartha, Shannon R, additional, Walji, Tezin A, additional, Walker, Chelsea A, additional, Saville, Kenneth, additional, Abrams, Marita K, additional, Armstrong, Andrew R, additional, Armstrong, William, additional, Bailey, Robert J, additional, Barberi, Chelsea R, additional, Beck, Lauren R, additional, Blaker, Amanda L, additional, Blunden, Christopher E, additional, Brand, Jordan P, additional, Brock, Ethan J, additional, Brooks, Dana W, additional, Brown, Marie, additional, Butzler, Sarah C, additional, Clark, Eric M, additional, Clark, Nicole B, additional, Collins, Ashley A, additional, Cotteleer, Rebecca J, additional, Cullimore, Peterson R, additional, Dawson, Seth G, additional, Docking, Carter T, additional, Dorsett, Sasha L, additional, Dougherty, Grace A, additional, Downey, Kaitlyn A, additional, Drake, Andrew P, additional, Earl, Erica K, additional, Floyd, Trevor G, additional, Forsyth, Joshua D, additional, Foust, Jonathan D, additional, Franchi, Spencer L, additional, Geary, James F, additional, Hanson, Cynthia K, additional, Harding, Taylor S, additional, Harris, Cameron B, additional, Heckman, Jonathan M, additional, Holderness, Heather L, additional, Howey, Nicole A, additional, Jacobs, Dontae A, additional, Jewell, Elizabeth S, additional, Kaisler, Maria, additional, Karaska, Elizabeth A, additional, Kehoe, James L, additional, Koaches, Hannah C, additional, Koehler, Jessica, additional, Koenig, Dana, additional, Kujawski, Alexander J, additional, Kus, Jordan E, additional, Lammers, Jennifer A, additional, Leads, Rachel R, additional, Leatherman, Emily C, additional, Lippert, Rachel N, additional, Messenger, Gregory S, additional, Morrow, Adam T, additional, Newcomb, Victoria, additional, Plasman, Haley J, additional, Potocny, Stephanie J, additional, Powers, Michelle K, additional, Reem, Rachel M, additional, Rennhack, Jonathan P, additional, Reynolds, Katherine R, additional, Reynolds, Lyndsey A, additional, Rhee, Dong K, additional, Rivard, Allyson B, additional, Ronk, Adam J, additional, Rooney, Meghan B, additional, Rubin, Lainey S, additional, Salbert, Luke R, additional, Saluja, Rasleen K, additional, Schauder, Taylor, additional, Schneiter, Allison R, additional, Schulz, Robert W, additional, Smith, Karl E, additional, Spencer, Sarah, additional, Swanson, Bryant R, additional, Tache, Melissa A, additional, Tewilliager, Ashley A, additional, Tilot, Amanda K, additional, VanEck, Eve, additional, Villerot, Matthew M, additional, Vylonis, Megan B, additional, Watson, David T, additional, Wurzler, Juliana A, additional, Wysocki, Lauren M, additional, Yalamanchili, Monica, additional, Zaborowicz, Matthew A, additional, Emerson, Julia A, additional, Ortiz, Carlos, additional, Deuschle, Frederic J, additional, DiLorenzo, Lauren A, additional, Goeller, Katie L, additional, Macchi, Christopher R, additional, Muller, Sarah E, additional, Pasierb, Brittany D, additional, Sable, Joseph E, additional, Tucci, Jessica M, additional, Tynon, Marykathryn, additional, Dunbar, David A, additional, Beken, Levent H, additional, Conturso, Alaina C, additional, Danner, Benjamin L, additional, DeMichele, Gabriella A, additional, Gonzales, Justin A, additional, Hammond, Maureen S, additional, Kelley, Colleen V, additional, Kelly, Elisabeth A, additional, Kulich, Danielle, additional, Mageeney, Catherine M, additional, McCabe, Nikie L, additional, Newman, Alyssa M, additional, Spaeder, Lindsay A, additional, Tumminello, Richard A, additional, Revie, Dennis, additional, Benson, Jonathon M, additional, Cristostomo, Michael C, additional, DaSilva, Paolo A, additional, Harker, Katherine S, additional, Jarrell, Jenifer N, additional, Jimenez, Luis A, additional, Katz, Brandon M, additional, Kennedy, William R, additional, Kolibas, Kimberly S, additional, LeBlanc, Mark T, additional, Nguyen, Trung T, additional, Nicolas, Daniel S, additional, Patao, Melissa D, additional, Patao, Shane M, additional, Rupley, Bryan J, additional, Sessions, Bridget J, additional, Weaver, Jennifer A, additional, Goodman, Anya L, additional, Alvendia, Erica L, additional, Baldassari, Shana M, additional, Brown, Ashley S, additional, Chase, Ian O, additional, Chen, Maida, additional, Chiang, Scott, additional, Cromwell, Avery B, additional, Custer, Ashley F, additional, DiTommaso, Tia M, additional, El-Adaimi, Jad, additional, Goscinski, Nora C, additional, Grove, Ryan A, additional, Gutierrez, Nestor, additional, Harnoto, Raechel S, additional, Hedeen, Heather, additional, Hong, Emily L, additional, Hopkins, Barbara L, additional, Huerta, Vilma F, additional, Khoshabian, Colin, additional, LaForge, Kristin M, additional, Lee, Cassidy T, additional, Lewis, Benjamin M, additional, Lydon, Anniken M, additional, Maniaci, Brian J, additional, Mitchell, Ryan D, additional, Morlock, Elaine V, additional, Morris, William M, additional, Naik, Priyanka, additional, Olson, Nicole C, additional, Osterloh, Jeannette M, additional, Perez, Marcos A, additional, Presley, Jonathan D, additional, Randazzo, Matt J, additional, Regan, Melanie K, additional, Rossi, Franca G, additional, Smith, Melanie A, additional, Soliterman, Eugenia A, additional, Sparks, Ciani J, additional, Tran, Danny L, additional, Wan, Tiffany, additional, Welker, Anne A, additional, Wong, Jeremy N, additional, Sreenivasan, Aparna, additional, Youngblom, Jim, additional, Adams, Andrew, additional, Alldredge, Justin, additional, Bryant, Ashley, additional, Carranza, David, additional, Cifelli, Alyssa, additional, Coulson, Kevin, additional, Debow, Calise, additional, Delacruz, Noelle, additional, Emerson, Charlene, additional, Farrar, Cassandra, additional, Foret, Don, additional, Garibay, Edgar, additional, Gooch, John, additional, Heslop, Michelle, additional, Kaur, Sukhjit, additional, Khan, Ambreen, additional, Kim, Van, additional, Lamb, Travis, additional, Lindbeck, Peter, additional, Lucas, Gabi, additional, Macias, Elizabeth, additional, Martiniuc, Daniela, additional, Mayorga, Lissett, additional, Medina, Joseph, additional, Membreno, Nelson, additional, Messiah, Shady, additional, Neufeld, Lacey, additional, Nguyen, San Francisco, additional, Nichols, Zachary, additional, Odisho, George, additional, Peterson, Daymon, additional, Rodela, Laura, additional, Rodriguez, Priscilla, additional, Rodriguez, Vanessa, additional, Ruiz, Jorge, additional, Sherrill, Will, additional, Silva, Valeria, additional, Sparks, Jeri, additional, Statton, Geeta, additional, Townsend, Ashley, additional, Valdez, Isabel, additional, Waters, Mary, additional, Westphal, Kyle, additional, Winkler, Stacey, additional, Zumkehr, Joannee, additional, DeJong, Randall J, additional, Hoogewerf, Arlene J, additional, Ackerman, Cheri M, additional, Armistead, Isaac O, additional, Baatenburg, Lara, additional, Borr, Matthew J, additional, Brouwer, Lindsay K, additional, Burkhart, Brandon J, additional, Bushhouse, Kelsey T, additional, Cesko, Lejla, additional, Choi, Tiffany Y Y, additional, Cohen, Heather, additional, Damsteegt, Amanda M, additional, Darusz, Jess M, additional, Dauphin, Cory M, additional, Davis, Yelena P, additional, Diekema, Emily J, additional, Drewry, Melissa, additional, Eisen, Michelle E M, additional, Faber, Hayley M, additional, Faber, Katherine J, additional, Feenstra, Elizabeth, additional, Felzer-Kim, Isabella T, additional, Hammond, Brandy L, additional, Hendriksma, Jesse, additional, Herrold, Milton R, additional, Hilbrands, Julia A, additional, Howell, Emily J, additional, Jelgerhuis, Sarah A, additional, Jelsema, Timothy R, additional, Johnson, Benjamin K, additional, Jones, Kelly K, additional, Kim, Anna, additional, Kooienga, Ross D, additional, Menyes, Erika E, additional, Nollet, Eric A, additional, Plescher, Brittany E, additional, Rios, Lindsay, additional, Rose, Jenny L, additional, Schepers, Allison J, additional, Scott, Geoff, additional, Smith, Joshua R, additional, Sterling, Allison M, additional, Tenney, Jenna C, additional, Uitvlugt, Chris, additional, VanDyken, Rachel E, additional, VanderVennen, Marielle, additional, Vue, Samantha, additional, Kokan, Nighat P, additional, Agbley, Kwabea, additional, Boham, Sampson K, additional, Broomfield, Daniel, additional, Chapman, Kayla, additional, Dobbe, Ali, additional, Dobbe, Ian, additional, Harrington, William, additional, Ibrahem, Marwan, additional, Kennedy, Andre, additional, Koplinsky, Chad A, additional, Kubricky, Cassandra, additional, Ladzekpo, Danielle, additional, Pattison, Claire, additional, Ramirez, Roman E, additional, Wande, Lucia, additional, Woehlke, Sarah, additional, Wawersik, Matthew, additional, Kiernan, Elizabeth, additional, Thompson, Jeffrey S, additional, Banker, Roxanne, additional, Bartling, Justina R, additional, Bhatiya, Chinmoy I, additional, Boudoures, Anna L, additional, Christiansen, Lena, additional, Fosselman, Daniel S, additional, French, Kristin M, additional, Gill, Ishwar S, additional, Havill, Jessen T, additional, Johnson, Jaelyn L, additional, Keny, Lauren J, additional, Kerber, John M, additional, Klett, Bethany M, additional, Kufel, Christina N, additional, May, Francis J, additional, Mecoli, Jonathan P, additional, Merry, Callie R, additional, Meyer, Lauren R, additional, Miller, Emily G, additional, Mullen, Gregory J, additional, Palozola, Katherine C, additional, Pfeil, Jacob J, additional, Thomas, Jessica G, additional, Verbofsky, Evan M, additional, Spana, Eric P, additional, Agarwalla, Anant, additional, Chapman, Julia, additional, Chlebina, Ben, additional, Chong, Insun, additional, Falk, I N, additional, Fitzgibbons, John D, additional, Friedman, Harrison, additional, Ighile, Osagie, additional, Kim, Andrew J, additional, Knouse, Kristin A, additional, Kung, Faith, additional, Mammo, Danny, additional, Ng, Chun Leung, additional, Nikam, Vinayak S, additional, Norton, Diana, additional, Pham, Philip, additional, Polk, Jessica W, additional, Prasad, Shreya, additional, Rankin, Helen, additional, Ratliff, Camille D, additional, Scala, Victoria, additional, Schwartz, Nicholas U, additional, Shuen, Jessica A, additional, Xu, Amy, additional, Xu, Thomas Q, additional, Zhang, Yi, additional, Rosenwald, Anne G, additional, Burg, Martin G, additional, Adams, Stephanie J, additional, Baker, Morgan, additional, Botsford, Bobbi, additional, Brinkley, Briana, additional, Brown, Carter, additional, Emiah, Shadie, additional, Enoch, Erica, additional, Gier, Chad, additional, Greenwell, Alyson, additional, Hoogenboom, Lindsay, additional, Matthews, Jordan E, additional, McDonald, Mitchell, additional, Mercer, Amanda, additional, Monsma, Nicholaus, additional, Ostby, Kristine, additional, Ramic, Alen, additional, Shallman, Devon, additional, Simon, Matthew, additional, Spencer, Eric, additional, Tomkins, Trisha, additional, Wendland, Pete, additional, Wylie, Anna, additional, Wolyniak, Michael J, additional, Robertson, Gregory M, additional, Smith, Samuel I, additional, DiAngelo, Justin R, additional, Sassu, Eric D, additional, Bhalla, Satish C, additional, Sharif, Karim A, additional, Choeying, Tenzin, additional, Macias, Jason S, additional, Sanusi, Fareed, additional, Torchon, Karvyn, additional, Bednarski, April E, additional, Alvarez, Consuelo J, additional, Davis, Kristen C, additional, Dunham, Carrie A, additional, Grantham, Alaina J, additional, Hare, Amber N, additional, Schottler, Jennifer, additional, Scott, Zackary W, additional, Kuleck, Gary A, additional, Yu, Nicole S, additional, Kaehler, Marian M, additional, Jipp, Jacob, additional, Overvoorde, Paul J, additional, Shoop, Elizabeth, additional, Cyrankowski, Olivia, additional, Hoover, Betsy, additional, Kusner, Matt, additional, Lin, Devry, additional, Martinov, Tijana, additional, Misch, Jonathan, additional, Salzman, Garrett, additional, Schiedermayer, Holly, additional, Snavely, Michael, additional, Zarrasola, Stephanie, additional, Parrish, Susan, additional, Baker, Atlee, additional, Beckett, Alissa, additional, Belella, Carissa, additional, Bryant, Julie, additional, Conrad, Turner, additional, Fearnow, Adam, additional, Gomez, Carolina, additional, Herbstsomer, Robert A, additional, Hirsch, Sarah, additional, Johnson, Christen, additional, Jones, Melissa, additional, Kabaso, Rita, additional, Lemmon, Eric, additional, Vieira, Carolina Marques dos Santos, additional, McFarland, Darryl, additional, McLaughlin, Christopher, additional, Morgan, Abbie, additional, Musokotwane, Sepo, additional, Neutzling, William, additional, Nietmann, Jana, additional, Paluskievicz, Christina, additional, Penn, Jessica, additional, Peoples, Emily, additional, Pozmanter, Caitlin, additional, Reed, Emily, additional, Rigby, Nichole, additional, Schmidt, Lasse, additional, Shelton, Micah, additional, Shuford, Rebecca, additional, Tirasawasdichai, Tiara, additional, Undem, Blair, additional, Urick, Damian, additional, Vondy, Kayla, additional, Yarrington, Bryan, additional, Eckdahl, Todd T, additional, Poet, Jeffrey L, additional, Allen, Alica B, additional, Anderson, John E, additional, Barnett, Jason M, additional, Baumgardner, Jordan S, additional, Brown, Adam D, additional, Carney, Jordan E, additional, Chavez, Ramiro A, additional, Christgen, Shelbi L, additional, Christie, Jordan S, additional, Clary, Andrea N, additional, Conn, Michel A, additional, Cooper, Kristen M, additional, Crowley, Matt J, additional, Crowley, Samuel T, additional, Doty, Jennifer S, additional, Dow, Brian A, additional, Edwards, Curtis R, additional, Elder, Darcie D, additional, Fanning, John P, additional, Janssen, Bridget M, additional, Lambright, Anthony K, additional, Lane, Curtiss E, additional, Limle, Austin B, additional, Mazur, Tammy, additional, McCracken, Marly R, additional, McDonough, Alexa M, additional, Melton, Amy D, additional, Minnick, Phillip J, additional, Musick, Adam E, additional, Newhart, William H, additional, Noynaert, Joseph W, additional, Ogden, Bradley J, additional, Sandusky, Michael W, additional, Schmuecker, Samantha M, additional, Shipman, Anna L, additional, Smith, Anna L, additional, Thomsen, Kristen M, additional, Unzicker, Matthew R, additional, Vernon, William B, additional, Winn, Wesley W, additional, Woyski, Dustin S, additional, Zhu, Xiao, additional, Du, Chunguang, additional, Ament, Caitlin, additional, Aso, Soham, additional, Bisogno, Laura Simone, additional, Caronna, Jason, additional, Fefelova, Nadezhda, additional, Lopez, Lenin, additional, Malkowitz, Lorraine, additional, Marra, Jonathan, additional, Menillo, Daniella, additional, Obiorah, Ifeanyi, additional, Onsarigo, Eric Nyabeta, additional, Primus, Shekerah, additional, Soos, Mahdi, additional, Tare, Archana, additional, Zidan, Ameer, additional, Jones, Christopher J, additional, Aronhalt, Todd, additional, Bellush, James M, additional, Burke, Christa, additional, DeFazio, Steve, additional, Does, Benjamin R, additional, Johnson, Todd D, additional, Keysock, Nicholas, additional, Knudsen, Nelson H, additional, Messler, James, additional, Myirski, Kevin, additional, Rekai, Jade Lea, additional, Rempe, Ryan Michael, additional, Salgado, Michael S, additional, Stagaard, Erica, additional, Starcher, Justin R, additional, Waggoner, Andrew W, additional, Yemelyanova, Anastasia K, additional, Hark, Amy T, additional, Bertolet, Anne, additional, Kuschner, Cyrus E, additional, Parry, Kesley, additional, Quach, Michael, additional, Shantzer, Lindsey, additional, Shaw, Mary E, additional, Smith, Mary A, additional, Glenn, Omolara, additional, Mason, Portia, additional, Williams, Charlotte, additional, Key, S Catherine Silver, additional, Henry, Tyneshia C P, additional, Johnson, Ashlee G, additional, White, Jackie X, additional, Haberman, Adam, additional, Asinof, Sam, additional, Drumm, Kelly, additional, Freeburg, Trip, additional, Safa, Nadia, additional, Schultz, Darrin, additional, Shevin, Yakov, additional, Svoronos, Petros, additional, Vuong, Tam, additional, Wellinghoff, Jules, additional, Hoopes, Laura L M, additional, Chau, Kim M, additional, Ward, Alyssa, additional, Regisford, E Gloria C, additional, Augustine, LaJerald, additional, Davis-Reyes, Brionna, additional, Echendu, Vivienne, additional, Hales, Jasmine, additional, Ibarra, Sharon, additional, Johnson, Lauriaun, additional, Ovu, Steven, additional, Braverman, John M, additional, Bahr, Thomas J, additional, Caesar, Nicole M, additional, Campana, Christopher, additional, Cassidy, Daniel W, additional, Cognetti, Peter A, additional, English, Johnathan D, additional, Fadus, Matthew C, additional, Fick, Cameron N, additional, Freda, Philip J, additional, Hennessy, Bryan M, additional, Hockenberger, Kelsey, additional, Jones, Jennifer K, additional, King, Jessica E, additional, Knob, Christopher R, additional, Kraftmann, Karen J, additional, Li, Linghui, additional, Lupey, Lena N, additional, Minniti, Carl J, additional, Minton, Thomas F, additional, Moran, Joseph V, additional, Mudumbi, Krishna, additional, Nordman, Elizabeth C, additional, Puetz, William J, additional, Robinson, Lauren M, additional, Rose, Thomas J, additional, Sweeney, Edward P, additional, Timko, Ashley S, additional, Paetkau, Don W, additional, Eisler, Heather L, additional, Aldrup, Megan E, additional, Bodenberg, Jessica M, additional, Cole, Mara G, additional, Deranek, Kelly M, additional, DeShetler, Megan, additional, Dowd, Rose M, additional, Eckardt, Alexandra K, additional, Ehret, Sharon C, additional, Fese, Jessica, additional, Garrett, Amanda D, additional, Kammrath, Anna, additional, Kappes, Michelle L, additional, Light, Morgan R, additional, Meier, Anne C, additional, O’Rouke, Allison, additional, Perella, Mallory, additional, Ramsey, Kimberley, additional, Ramthun, Jennifer R, additional, Reilly, Mary T, additional, Robinett, Deirdre, additional, Rossi, Nadine L, additional, Schueler, Mary Grace, additional, Shoemaker, Emma, additional, Starkey, Kristin M, additional, Vetor, Ashley, additional, Vrable, Abby, additional, Chandrasekaran, Vidya, additional, Beck, Christopher, additional, Hatfield, Kristen R, additional, Herrick, Douglas A, additional, Khoury, Christopher B, additional, Lea, Charlotte, additional, Louie, Christopher A, additional, Lowell, Shannon M, additional, Reynolds, Thomas J, additional, Schibler, Jeanine, additional, Scoma, Alexandra H, additional, Smith-Gee, Maxwell T, additional, Tuberty, Sarah, additional, Smith, Christopher D, additional, Lopilato, Jane E, additional, Hauke, Jeanette, additional, Roecklein-Canfield, Jennifer A, additional, Corrielus, Maureen, additional, Gilman, Hannah, additional, Intriago, Stephanie, additional, Maffa, Amanda, additional, Rauf, Sabya A, additional, Thistle, Katrina, additional, Trieu, Melissa, additional, Winters, Jenifer, additional, Yang, Bib, additional, Hauser, Charles R, additional, Abusheikh, Tariq, additional, Ashrawi, Yara, additional, Benitez, Pedro, additional, Boudreaux, Lauren R, additional, Bourland, Megan, additional, Chavez, Miranda, additional, Cruz, Samantha, additional, Elliott, GiNell, additional, Farek, Jesse R, additional, Flohr, Sarah, additional, Flores, Amanda H, additional, Friedrichs, Chelsey, additional, Fusco, Zach, additional, Goodwin, Zane, additional, Helmreich, Eric, additional, Kiley, John, additional, Knepper, John Mark, additional, Langner, Christine, additional, Martinez, Megan, additional, Mendoza, Carlos, additional, Naik, Monal, additional, Ochoa, Andrea, additional, Ragland, Nicolas, additional, Raimey, England, additional, Rathore, Sunil, additional, Reza, Evangelina, additional, Sadovsky, Griffin, additional, Seydoux, Marie-Isabelle B, additional, Smith, Jonathan E, additional, Unruh, Anna K, additional, Velasquez, Vicente, additional, Wolski, Matthew W, additional, Gosser, Yuying, additional, Govind, Shubha, additional, Clarke-Medley, Nicole, additional, Guadron, Leslie, additional, Lau, Dawn, additional, Lu, Alvin, additional, Mazzeo, Cheryl, additional, Meghdari, Mariam, additional, Ng, Simon, additional, Pamnani, Brad, additional, Plante, Olivia, additional, Shum, Yuki Kwan Wa, additional, Song, Roy, additional, Johnson, Diana E, additional, Abdelnabi, Mai, additional, Archambault, Alexi, additional, Chamma, Norma, additional, Gaur, Shailly, additional, Hammett, Deborah, additional, Kandahari, Adrese, additional, Khayrullina, Guzal, additional, Kumar, Sonali, additional, Lawrence, Samantha, additional, Madden, Nigel, additional, Mandelbaum, Max, additional, Milnthorp, Heather, additional, Mohini, Shiv, additional, Patel, Roshni, additional, Peacock, Sarah J, additional, Perling, Emily, additional, Quintana, Amber, additional, Rahimi, Michael, additional, Ramirez, Kristen, additional, Singhal, Rishi, additional, Weeks, Corinne, additional, Wong, Tiffany, additional, Gillis, Aubree T, additional, Moore, Zachary D, additional, Savell, Christopher D, additional, Watson, Reece, additional, Mel, Stephanie F, additional, Anilkumar, Arjun A, additional, Bilinski, Paul, additional, Castillo, Rostislav, additional, Closser, Michael, additional, Cruz, Nathalia M, additional, Dai, Tiffany, additional, Garbagnati, Giancarlo F, additional, Horton, Lanor S, additional, Kim, Dongyeon, additional, Lau, Joyce H, additional, Liu, James Z, additional, Mach, Sandy D, additional, Phan, Thu A, additional, Ren, Yi, additional, Stapleton, Kenneth E, additional, Strelitz, Jean M, additional, Sunjed, Ray, additional, Stamm, Joyce, additional, Anderson, Morgan C, additional, Bonifield, Bethany Grace, additional, Coomes, Daniel, additional, Dillman, Adam, additional, Durchholz, Elaine J, additional, Fafara-Thompson, Antoinette E, additional, Gross, Meleah J, additional, Gygi, Amber M, additional, Jackson, Lesley E, additional, Johnson, Amy, additional, Kocsisova, Zuzana, additional, Manghelli, Joshua L, additional, McNeil, Kylie, additional, Murillo, Michael, additional, Naylor, Kierstin L, additional, Neely, Jessica, additional, Ogawa, Emmy E, additional, Rich, Ashley, additional, Rogers, Anna, additional, Spencer, J Devin, additional, Stemler, Kristina M, additional, Throm, Allison A, additional, Van Camp, Matt, additional, Weihbrecht, Katie, additional, Wiles, T Aaron, additional, Williams, Mallory A, additional, Williams, Matthew, additional, Zoll, Kyle, additional, Bailey, Cheryl, additional, Zhou, Leming, additional, Balthaser, Darla M, additional, Bashiri, Azita, additional, Bower, Mindy E, additional, Florian, Kayla A, additional, Ghavam, Nazanin, additional, Greiner-Sosanko, Elizabeth S, additional, Karim, Helmet, additional, Mullen, Victor W, additional, Pelchen, Carly E, additional, Yenerall, Paul M, additional, Zhang, Jiayu, additional, Rubin, Michael R, additional, Arias-Mejias, Suzette M, additional, Bermudez-Capo, Armando G, additional, Bernal-Vega, Gabriela V, additional, Colon-Vazquez, Mariela, additional, Flores-Vazquez, Arelys, additional, Gines-Rosario, Mariela, additional, Llavona-Cartagena, Ivan G, additional, Martinez-Rodriguez, Javier O, additional, Ortiz-Fuentes, Lionel, additional, Perez-Colomba, Eliezer O, additional, Perez-Otero, Joseph, additional, Rivera, Elisandra, additional, Rodriguez-Giron, Luke J, additional, Santiago-Sanabria, Arnaldo J, additional, Senquiz-Gonzalez, Andrea M, additional, delValle, Frank R Soto, additional, Vargas-Franco, Dorianmarie, additional, Velázquez-Soto, Karla I, additional, Zambrana-Burgos, Joan D, additional, Martinez-Cruzado, Juan Carlos, additional, Asencio-Zayas, Lillyann, additional, Babilonia-Figueroa, Kevin, additional, Beauchamp-Pérez, Francis D, additional, Belén-Rodríguez, Juliana, additional, Bracero-Quiñones, Luciann, additional, Burgos-Bula, Andrea P, additional, Collado-Méndez, Xavier A, additional, Colón-Cruz, Luis R, additional, Correa-Muller, Ana I, additional, Crooke-Rosado, Jonathan L, additional, Cruz-García, José M, additional, Defendini-Ávila, Marianna, additional, Delgado-Peraza, Francheska M, additional, Feliciano-Cancela, Alex J, additional, Gónzalez-Pérez, Valerie M, additional, Guiblet, Wilfried, additional, Heredia-Negrón, Aldo, additional, Hernández-Muñiz, Jennifer, additional, Irizarry-González, Lourdes N, additional, Laboy-Corales, Ángel L, additional, Llaurador-Caraballo, Gabriela A, additional, Marín-Maldonado, Frances, additional, Marrero-Llerena, Ulises, additional, Martell-Martínez, Héctor A, additional, Martínez-Traverso, Idaliz M, additional, Medina-Ortega, Kiara N, additional, Méndez-Castellanos, Sonya G, additional, Menéndez-Serrano, Krizia C, additional, Morales-Caraballo, Carol I, additional, Ortiz-DeChoudens, Saryleine, additional, Ortiz-Ortiz, Patricia, additional, Pagán-Torres, Hendrick, additional, Pérez-Afanador, Diana, additional, Quintana-Torres, Enid M, additional, Ramírez-Aponte, Edwin G, additional, Riascos-Cuero, Carolina, additional, Rivera-Llovet, Michelle S, additional, Rivera-Pagán, Ingrid T, additional, Rivera-Vicéns, Ramón E, additional, Robles-Juarbe, Fabiola, additional, Rodríguez-Bonilla, Lorraine, additional, Rodríguez-Echevarría, Brian O, additional, Rodríguez-García, Priscila M, additional, Rodríguez-Laboy, Abneris E, additional, Rodríguez-Santiago, Susana, additional, Rojas-Vargas, Michael L, additional, Rubio-Marrero, Eva N, additional, Santiago-Colón, Albeliz, additional, Santiago-Ortiz, Jorge L, additional, Santos-Ramos, Carlos E, additional, Serrano-González, Joseline, additional, Tamayo-Figueroa, Alina M, additional, Tascón-Peñaranda, Edna P, additional, Torres-Castillo, José L, additional, Valentín-Feliciano, Nelson A, additional, Valentín-Feliciano, Yashira M, additional, Vargas-Barreto, Nadyan M, additional, Vélez-Vázquez, Miguel, additional, Vilanova-Vélez, Luis R, additional, Zambrana-Echevarría, Cristina, additional, MacKinnon, Christy, additional, Chung, Hui-Min, additional, Kay, Chris, additional, Pinto, Anthony, additional, Kopp, Olga R, additional, Burkhardt, Joshua, additional, Harward, Chris, additional, Allen, Robert, additional, Bhat, Pavan, additional, Chang, Jimmy Hsiang-Chun, additional, Chen, York, additional, Chesley, Christopher, additional, Cohn, Dara, additional, DuPuis, David, additional, Fasano, Michael, additional, Fazzio, Nicholas, additional, Gavinski, Katherine, additional, Gebreyesus, Heran, additional, Giarla, Thomas, additional, Gostelow, Marcus, additional, Greenstein, Rachel, additional, Gunasinghe, Hashini, additional, Hanson, Casey, additional, Hay, Amanda, additional, He, Tao Jian, additional, Homa, Katie, additional, Howe, Ruth, additional, Howenstein, Jeff, additional, Huang, Henry, additional, Khatri, Aaditya, additional, Kim, Young Lu, additional, Knowles, Olivia, additional, Kong, Sarah, additional, Krock, Rebecca, additional, Kroll, Matt, additional, Kuhn, Julia, additional, Kwong, Matthew, additional, Lee, Brandon, additional, Lee, Ryan, additional, Levine, Kevin, additional, Li, Yedda, additional, Liu, Bo, additional, Liu, Lucy, additional, Liu, Max, additional, Lousararian, Adam, additional, Ma, Jimmy, additional, Mallya, Allyson, additional, Manchee, Charlie, additional, Marcus, Joseph, additional, McDaniel, Stephen, additional, Miller, Michelle L, additional, Molleston, Jerome M, additional, Diez, Cristina Montero, additional, Ng, Patrick, additional, Ngai, Natalie, additional, Nguyen, Hien, additional, Nylander, Andrew, additional, Pollack, Jason, additional, Rastogi, Suchita, additional, Reddy, Himabindu, additional, Regenold, Nathaniel, additional, Sarezky, Jon, additional, Schultz, Michael, additional, Shim, Jien, additional, Skorupa, Tara, additional, Smith, Kenneth, additional, Spencer, Sarah J, additional, Srikanth, Priya, additional, Stancu, Gabriel, additional, Stein, Andrew P, additional, Strother, Marshall, additional, Sudmeier, Lisa, additional, Sun, Mengyang, additional, Sundaram, Varun, additional, Tazudeen, Noor, additional, Tseng, Alan, additional, Tzeng, Albert, additional, Venkat, Rohit, additional, Venkataram, Sandeep, additional, Waldman, Leah, additional, Wang, Tracy, additional, Yang, Hao, additional, Yu, Jack Y, additional, Zheng, Yin, additional, Preuss, Mary L, additional, Garcia, Angelica, additional, Juergens, Matt, additional, Morris, Robert W, additional, Nagengast, Alexis A, additional, Azarewicz, Julie, additional, Carr, Thomas J, additional, Chichearo, Nicole, additional, Colgan, Mike, additional, Donegan, Megan, additional, Gardner, Bob, additional, Kolba, Nik, additional, Krumm, Janice L, additional, Lytle, Stacey, additional, MacMillian, Laurell, additional, Miller, Mary, additional, Montgomery, Andrew, additional, Moretti, Alysha, additional, Offenbacker, Brittney, additional, Polen, Mike, additional, Toth, John, additional, Woytanowski, John, additional, Kadlec, Lisa, additional, Crawford, Justin, additional, Spratt, Mary L, additional, Adams, Ashley L, additional, Barnard, Brianna K, additional, Cheramie, Martin N, additional, Eime, Anne M, additional, Golden, Kathryn L, additional, Hawkins, Allyson P, additional, Hill, Jessica E, additional, Kampmeier, Jessica A, additional, Kern, Cody D, additional, Magnuson, Emily E, additional, Miller, Ashley R, additional, Morrow, Cody M, additional, Peairs, Julia C, additional, Pickett, Gentry L, additional, Popelka, Sarah A, additional, Scott, Alexis J, additional, Teepe, Emily J, additional, TerMeer, Katie A, additional, Watchinski, Carmen A, additional, Watson, Lucas A, additional, Weber, Rachel E, additional, Woodard, Kate A, additional, Barnard, Daron C, additional, Appiah, Isaac, additional, Giddens, Michelle M, additional, McNeil, Gerard P, additional, Adebayo, Adeola, additional, Bagaeva, Kate, additional, Chinwong, Justina, additional, Dol, Chrystel, additional, George, Eunice, additional, Haltaufderhyde, Kirk, additional, Haye, Joanna, additional, Kaur, Manpreet, additional, Semon, Max, additional, Serjanov, Dmitri, additional, Toorie, Anika, additional, Wilson, Christopher, additional, Riddle, Nicole C, additional, Buhler, Jeremy, additional, Mardis, Elaine R, additional, and Elgin, Sarah C R, additional
Published: 2015
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34. INTERNALIZED HIV STIGMA AND MENTAL HEALTH/SUBSTANCE USE OVER TIME.

Author: Drumright, Lydia, Short, Duncan, Napravnik, Sonia, Cachay, Edward R., Moffatt, Ellie, Christopoulos, Katerina, Neilands, Torsten, Mayer, Kenneth, Johnson, Mallory O., Ma, Jimmy, Hahn, Andrew, Nance, Robin, Crawford, Timothy, Chander, Geetanjali, Fredericksen, Rob, and Whitney, Bridget M.
Published: 2023

35. INTIMATE PARTNER VIOLENCE IN A COHORT OF PERSONS WITH HIV IN CARE.

Author: Fredericksen, Rob, Drumright, Lydia, Mixson, Sarah, Nance, Robin, Whitney, Bridget M., Ruderman, Stephanie, Ma, Jimmy, Hahn, Andrew, Napravnik, Sonia, Willig, Amanda, Jacobson, Jeff, Christopoulos, Katerina, Cachay, Edward R., Kitahata, Mari, and Crane, Heidi
Published: 2023

36. Advanced transformational analysis applied to e-beam proximity effect correction

Author: Barouch, Eytan, primary, Coifman, Ronald R., additional, Ma, Jimmy T., additional, Peckerar, Martin C., additional, and Rokhlin, Vladimir, additional
Published: 1993
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37. Advanced transformational analysis applied to e-beam proximity effect correction.

Author: Barouch, Eytan, Coifman, Ronald R., Ma, Jimmy T., Peckerar, Martin C., and Rokhlin, Vladimir
Published: 1993
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38. Prevalence and Correlates of Hepatitis C Viremia Among People With Human Immunodeficiency Virus in the Direct-Acting Antiviral Era.

Author: Ma J, Nance RM, Cachay E, Ruderman SA, Kitahata M, Falade-Nwulia O, Chander G, Drumright LN, Hurt CB, Yendewa GA, Pettit A, Moore RD, Fredericksen RJ, Lloyd A, Bamford L, Napravnik S, Fleming J, Christopoulos K, Burkholder G, Keruly J, Delaney JAC, Crane H, and Kim HN
Abstract: Background: National US data on the burden and risks for hepatitis C virus (HCV) infection in people with human immunodeficiency virus (HIV) during the direct-acting antiviral (DAA) era are limited. These data are important to understand current progress and guide future efforts toward HCV microelimination., Methods: We evaluated (1) HCV prevalence (2011-2013, 2014-2017, 2018-2022) using a serial cross-sectional design and (2) correlates for HCV viremia (2018-2022) in adult people with HIV (PWH) within the Centers for AIDS Research Network of Integrated Clinic Systems (CNICS) cohort using multivariable adjusted relative risk regression. The most recent data from each time period were used for calculations and models., Results: In the CNICS cohort, HCV viremia prevalence was 8.7% in 2011-2013, 10.5% in 2014-2017, and 4.8% in 2018-2022. Disparities in prevalence across demographic groups defined by age, gender, and race/ethnicity were smaller in 2018-2022 than earlier time periods. In relative risk regression, female gender, detectable HIV RNA, higher proportion of missed visits (last 18 months), higher FIB-4 score, higher depressive symptom severity, and current use of methamphetamine and illicit opioids were associated with HCV viremia in 2018-2022., Conclusions: The prevalence of HCV viremia during the DAA era in this US-based national cohort of PWH improved over time and across demographic subgroups but remains higher than those without HIV. Our findings highlight the continued importance of prioritizing HCV care in all PWH, especially in certain key, less-reached groups. Proactive, comprehensive efforts to care engagement, substance use, mental health, and other social determinants will be crucial to improve reach, prevention, and treatment to achieve HCV elimination goals., Competing Interests: Potential conflicts of interest. All authors: No reported conflicts of interest., (© The Author(s) 2025. Published by Oxford University Press on behalf of Infectious Diseases Society of America.)
Published: 2025
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39. Outbreak of Rotavirus Diarrheal Infection among Adults in King County, Washington, January-June 2023.

Author: Ma J, Kumbhakar RG, Casto A, Chow EJ, Englund JA, Gautam R, Jaimes J, Tate JE, Smart S, Mani NS, Cohen SA, Hussein A, Rietberg K, Bryson-Cahn C, and Fang FC
Abstract: Rotavirus is a leading cause of diarrhea among children but less known as a cause among adults. We describe clinical, epidemiologic, and genotype characteristics of a rotavirus outbreak among adults in King County, Washington occurring January-June 2023. Adult rotavirus incidence in 2023 was ten times higher than the same period in 2022 (5% versus 0.5% samples). Disease severity was mild. G9P[4], an uncommon, non-vaccine strain in USA, was the predominant genotype. Genotyping suggested spillover from children with subsequent spread among adults. Our study highlights benefits of routine testing and genotyping during outbreaks for surveillance, tracking, and understanding implications on vaccination., (© The Author(s) 2025. Published by Oxford University Press on behalf of Infectious Diseases Society of America. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
Published: 2025
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40. Smoking and Type 1 Versus Type 2 Myocardial Infarction Among People With HIV in the United States: Results from the Center for AIDS Research Network Integrated Clinical Systems Cohort.

Author: Crane HM, Nance RM, Ruderman SA, Drumright LN, Mixson LS, Heckbert SR, Feinstein MJ, Budoff MJ, Bamford L, Cachay E, Napravnik S, Moore RD, Keruly J, Willig AL, Burkholder GA, Hahn A, Ma J, Fredericksen R, Saag MS, Chander G, Kitahata MM, Crothers K, Mayer KH, O'Cleirigh C, Cropsey K, Whitney BM, and Delaney JAC
Subjects: Humans, Male, Female, Middle Aged, United States epidemiology, Adult, Risk Factors, Cohort Studies, Proportional Hazards Models, Myocardial Infarction epidemiology, HIV Infections epidemiology, HIV Infections complications, Smoking epidemiology
Abstract: Abstract: Smoking is a myocardial infarction (MI) risk factor among people with HIV (PWH). Questions persist regarding the role of smoking behaviors and measurements (e.g., intensity, duration) on MI risk. We used Cox proportional hazards regression to compare the association of smoking parameterization with incidents of type 1 and type 2 MI and whether smoking intensity or duration improves MI risk prediction among PWH. Among 11,637 PWH, 37% reported currently smoking, and there were 346 MIs. Current smoking was associated with type 1 (84% increased risk) but not type 2 MI in adjusted analyses. The type 1 MI model with pack years had the best goodness of fit compared with other smoking parameterizations. Ever or never parameterization and smoking diagnosis data had significantly poorer model fit. These results highlight the importance of differentiating MI types and performing patient-based smoking assessments to improve HIV care and research rather than relying on smoking status from diagnoses., (Copyright © 2024 Association of Nurses in AIDS Care.)
Published: 2024
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41. Venous Thromboembolism Among People With HIV: Design, Implementation, and Findings of a Centralized Adjudication System in Clinical Care Sites Across the United States.

Author: Crane HM, Nance RM, Ruderman SA, Haidar L, Tenforde MW, Heckbert SR, Budoff MJ, Hahn AW, Drumright LN, Ma J, Mixson LS, Lober WB, Barnes GS, McReynolds J, Attia EF, Peter I, Moges T, Bamford L, Cachay E, Mathews WC, Christopolous K, Hunt PW, Napravnik S, Keruly J, Moore RD, Burkholder G, Willig AL, Lindstrom S, Whitney BM, Saag MS, Kitahata MM, Crothers KA, and Delaney JAC
Subjects: Humans, United States epidemiology, Risk Factors, Viremia complications, Venous Thromboembolism epidemiology, Venous Thromboembolism complications, HIV Infections complications, Venous Thrombosis complications
Abstract: Background: People with HIV (PWH) are at increased risk for venous thromboembolism (VTE). We conducted this study to characterize VTE including provoking factors among PWH in the current treatment era., Methods: We included PWH with VTE between 2010 and 2020 at 6 sites in the CFAR Network of Integrated Clinical Systems cohort. We ascertained for possible VTE using diagnosis, VTE-related imaging, and VTE-related procedure codes, followed by centralized adjudication of primary data by expert physician reviewers. We evaluated sensitivity and positive predictive value of VTE ascertainment approaches. VTEs were classified by type and anatomic location. Reviewers identified provoking factors such as hospitalizations, infections, and other potential predisposing factors such as smoking., Results: We identified 557 PWH with adjudicated VTE: 239 (43%) had pulmonary embolism with or without deep venous thrombosis, and 318 (57%) had deep venous thrombosis alone. Ascertainment with clinical diagnoses alone missed 6% of VTEs identified with multiple ascertainment approaches. DVTs not associated with intravenous lines were most often in the proximal lower extremities. Among PWH with VTE, common provoking factors included recent hospitalization (n = 134, 42%), infection (n = 133, 42%), and immobilization/bed rest (n = 78, 25%). Only 57 (10%) PWH had no provoking factor identified. Smoking (46%), HIV viremia (27%), and injection drug use (22%) were also common., Conclusions: We conducted a robust adjudication process that demonstrated the benefits of multiple ascertainment approaches followed by adjudication. Provoked VTEs were more common than unprovoked events. Nontraditional and modifiable potential predisposing factors such as viremia and smoking were common., (Copyright © 2023 Wolters Kluwer Health, Inc. All rights reserved.)
Published: 2024
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42. Tobacco Smoking and Pack-Years Are Associated With Frailty Among People With HIV.

Author: Ruderman SA, Odden MC, Webel AR, Fitzpatrick AL, Crane PK, Nance RM, Drumright LN, Whitney BM, Mixson LS, Ma J, Willig AL, Haidar L, Eltonsy S, Mayer KH, O'Cleirigh C, Cropsey KL, Eron JJ, Napravnik S, Greene M, McCaul M, Chander G, Cachay E, Lober WB, Kritchevsky SB, Austad S, Landay A, Pandya C, Cartujano-Barrera F, Saag MS, Kamen C, Hahn AW, Kitahata MM, Delaney JAC, and Crane HM
Subjects: Humans, Female, Male, Smoking adverse effects, Tobacco Smoking, Phenotype, Frailty complications, Frailty epidemiology, HIV Infections complications
Abstract: Background: Tobacco smoking increases frailty risk among the general population and is common among people with HIV (PWH) who experience higher rates of frailty at younger ages than the general population., Methods: We identified 8608 PWH across 6 Centers for AIDS Research Network of Integrated Clinical Systems sites who completed ≥2 patient-reported outcome assessments, including a frailty phenotype measuring unintentional weight loss, poor mobility, fatigue, and inactivity, and scored 0-4. Smoking was measured as baseline pack-years and time-updated never, former, or current use with cigarettes/day. We used Cox models to associate smoking with risk of incident frailty (score ≥3) and deterioration (frailty score increase by ≥2 points), adjusted for demographics, antiretroviral medication, and time-updated CD4 count., Results: The mean follow-up of PWH was 5.3 years (median: 5.0), the mean age at baseline was 45 years, 15% were female, and 52% were non-White. At baseline, 60% reported current or former smoking. Current (HR: 1.79; 95% confidence interval: 1.54 to 2.08) and former (HR: 1.31; 95% confidence interval: 1.12 to 1.53) smoking were associated with higher incident frailty risk, as were higher pack-years. Current smoking (among younger PWH) and pack-years, but not former smoking, were associated with higher risk of deterioration., Conclusions: Among PWH, smoking status and duration are associated with incident and worsening frailty., Competing Interests: The authors have no conflicts of interest to disclose., (Copyright © 2023 Wolters Kluwer Health, Inc. All rights reserved.)
Published: 2023
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43. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution.

Author: Leung W, Shaffer CD, Reed LK, Smith ST, Barshop W, Dirkes W, Dothager M, Lee P, Wong J, Xiong D, Yuan H, Bedard JE, Machone JF, Patterson SD, Price AL, Turner BA, Robic S, Luippold EK, McCartha SR, Walji TA, Walker CA, Saville K, Abrams MK, Armstrong AR, Armstrong W, Bailey RJ, Barberi CR, Beck LR, Blaker AL, Blunden CE, Brand JP, Brock EJ, Brooks DW, Brown M, Butzler SC, Clark EM, Clark NB, Collins AA, Cotteleer RJ, Cullimore PR, Dawson SG, Docking CT, Dorsett SL, Dougherty GA, Downey KA, Drake AP, Earl EK, Floyd TG, Forsyth JD, Foust JD, Franchi SL, Geary JF, Hanson CK, Harding TS, Harris CB, Heckman JM, Holderness HL, Howey NA, Jacobs DA, Jewell ES, Kaisler M, Karaska EA, Kehoe JL, Koaches HC, Koehler J, Koenig D, Kujawski AJ, Kus JE, Lammers JA, Leads RR, Leatherman EC, Lippert RN, Messenger GS, Morrow AT, Newcomb V, Plasman HJ, Potocny SJ, Powers MK, Reem RM, Rennhack JP, Reynolds KR, Reynolds LA, Rhee DK, Rivard AB, Ronk AJ, Rooney MB, Rubin LS, Salbert LR, Saluja RK, Schauder T, Schneiter AR, Schulz RW, Smith KE, Spencer S, Swanson BR, Tache MA, Tewilliager AA, Tilot AK, VanEck E, Villerot MM, Vylonis MB, Watson DT, Wurzler JA, Wysocki LM, Yalamanchili M, Zaborowicz MA, Emerson JA, Ortiz C, Deuschle FJ, DiLorenzo LA, Goeller KL, Macchi CR, Muller SE, Pasierb BD, Sable JE, Tucci JM, Tynon M, Dunbar DA, Beken LH, Conturso AC, Danner BL, DeMichele GA, Gonzales JA, Hammond MS, Kelley CV, Kelly EA, Kulich D, Mageeney CM, McCabe NL, Newman AM, Spaeder LA, Tumminello RA, Revie D, Benson JM, Cristostomo MC, DaSilva PA, Harker KS, Jarrell JN, Jimenez LA, Katz BM, Kennedy WR, Kolibas KS, LeBlanc MT, Nguyen TT, Nicolas DS, Patao MD, Patao SM, Rupley BJ, Sessions BJ, Weaver JA, Goodman AL, Alvendia EL, Baldassari SM, Brown AS, Chase IO, Chen M, Chiang S, Cromwell AB, Custer AF, DiTommaso TM, El-Adaimi J, Goscinski NC, Grove RA, Gutierrez N, Harnoto RS, Hedeen H, Hong EL, Hopkins BL, Huerta VF, Khoshabian C, LaForge KM, Lee CT, Lewis BM, Lydon AM, Maniaci BJ, Mitchell RD, Morlock EV, Morris WM, Naik P, Olson NC, Osterloh JM, Perez MA, Presley JD, Randazzo MJ, Regan MK, Rossi FG, Smith MA, Soliterman EA, Sparks CJ, Tran DL, Wan T, Welker AA, Wong JN, Sreenivasan A, Youngblom J, Adams A, Alldredge J, Bryant A, Carranza D, Cifelli A, Coulson K, Debow C, Delacruz N, Emerson C, Farrar C, Foret D, Garibay E, Gooch J, Heslop M, Kaur S, Khan A, Kim V, Lamb T, Lindbeck P, Lucas G, Macias E, Martiniuc D, Mayorga L, Medina J, Membreno N, Messiah S, Neufeld L, Nguyen SF, Nichols Z, Odisho G, Peterson D, Rodela L, Rodriguez P, Rodriguez V, Ruiz J, Sherrill W, Silva V, Sparks J, Statton G, Townsend A, Valdez I, Waters M, Westphal K, Winkler S, Zumkehr J, DeJong RJ, Hoogewerf AJ, Ackerman CM, Armistead IO, Baatenburg L, Borr MJ, Brouwer LK, Burkhart BJ, Bushhouse KT, Cesko L, Choi TY, Cohen H, Damsteegt AM, Darusz JM, Dauphin CM, Davis YP, Diekema EJ, Drewry M, Eisen ME, Faber HM, Faber KJ, Feenstra E, Felzer-Kim IT, Hammond BL, Hendriksma J, Herrold MR, Hilbrands JA, Howell EJ, Jelgerhuis SA, Jelsema TR, Johnson BK, Jones KK, Kim A, Kooienga RD, Menyes EE, Nollet EA, Plescher BE, Rios L, Rose JL, Schepers AJ, Scott G, Smith JR, Sterling AM, Tenney JC, Uitvlugt C, VanDyken RE, VanderVennen M, Vue S, Kokan NP, Agbley K, Boham SK, Broomfield D, Chapman K, Dobbe A, Dobbe I, Harrington W, Ibrahem M, Kennedy A, Koplinsky CA, Kubricky C, Ladzekpo D, Pattison C, Ramirez RE Jr, Wande L, Woehlke S, Wawersik M, Kiernan E, Thompson JS, Banker R, Bartling JR, Bhatiya CI, Boudoures AL, Christiansen L, Fosselman DS, French KM, Gill IS, Havill JT, Johnson JL, Keny LJ, Kerber JM, Klett BM, Kufel CN, May FJ, Mecoli JP, Merry CR, Meyer LR, Miller EG, Mullen GJ, Palozola KC, Pfeil JJ, Thomas JG, Verbofsky EM, Spana EP, Agarwalla A, Chapman J, Chlebina B, Chong I, Falk IN, Fitzgibbons JD, Friedman H, Ighile O, Kim AJ, Knouse KA, Kung F, Mammo D, Ng CL, Nikam VS, Norton D, Pham P, Polk JW, Prasad S, Rankin H, Ratliff CD, Scala V, Schwartz NU, Shuen JA, Xu 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R, Tirasawasdichai T, Undem B, Urick D, Vondy K, Yarrington B, Eckdahl TT, Poet JL, Allen AB, Anderson JE, Barnett JM, Baumgardner JS, Brown AD, Carney JE, Chavez RA, Christgen SL, Christie JS, Clary AN, Conn MA, Cooper KM, Crowley MJ, Crowley ST, Doty JS, Dow BA, Edwards CR, Elder DD, Fanning JP, Janssen BM, Lambright AK, Lane CE, Limle AB, Mazur T, McCracken MR, McDonough AM, Melton AD, Minnick PJ, Musick AE, Newhart WH, Noynaert JW, Ogden BJ, Sandusky MW, Schmuecker SM, Shipman AL, Smith AL, Thomsen KM, Unzicker MR, Vernon WB, Winn WW, Woyski DS, Zhu X, Du C, Ament C, Aso S, Bisogno LS, Caronna J, Fefelova N, Lopez L, Malkowitz L, Marra J, Menillo D, Obiorah I, Onsarigo EN, Primus S, Soos M, Tare A, Zidan A, Jones CJ, Aronhalt T, Bellush JM, Burke C, DeFazio S, Does BR, Johnson TD, Keysock N, Knudsen NH, Messler J, Myirski K, Rekai JL, Rempe RM, Salgado MS, Stagaard E, Starcher JR, Waggoner AW, Yemelyanova AK, Hark AT, Bertolet A, Kuschner CE, Parry K, Quach M, Shantzer L, Shaw ME, 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Subjects: Animals, Codon, Computational Biology, DNA Transposable Elements, Drosophila melanogaster genetics, Exons, Gene Rearrangement, Heterochromatin, Introns, Molecular Sequence Annotation, Polytene Chromosomes, Repetitive Sequences, Nucleic Acid, Selection, Genetic, Species Specificity, Drosophila genetics, Drosophila Proteins genetics, Evolution, Molecular, Genome, Genomics
Abstract: The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25-50%) than euchromatic reference regions (3-11%). Among the F elements, D. grimshawi has the lowest transposon density (particularly DINE-1: 2% vs. 11-27%). F element genes have larger coding spans, more coding exons, larger introns, and lower codon bias. Comparison of the Effective Number of Codons with the Codon Adaptation Index shows that, in contrast to the other species, codon bias in D. grimshawi F element genes can be attributed primarily to selection instead of mutational biases, suggesting that density and types of transposons affect the degree of local heterochromatin formation. F element genes have lower estimated DNA melting temperatures than D element genes, potentially facilitating transcription through heterochromatin. Most F element genes (~90%) have remained on that element, but the F element has smaller syntenic blocks than genome averages (3.4-3.6 vs. 8.4-8.8 genes per block), indicating greater rates of inversion despite lower rates of recombination. Overall, the F element has maintained characteristics that are distinct from other autosomes in the Drosophila lineage, illuminating the constraints imposed by a heterochromatic milieu., (Copyright © 2015 Leung et al.)
Published: 2015
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