811 results on '"Makoto N"'
Search Results
2. 1-O-Sulfatobastadins-1 and -2 from Ianthella basta (Pallas).Antagonists of the yR1-FKBP12 Ca2+ Channel
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Tadeusz F. Molinski, Isaac N. Pessah, Alexander C. Hoepker, and Makoto N. Masuno
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Bromotyrosine ,calcium channel ,Porifera ,ryanodine receptor ,Biology (General) ,QH301-705.5 - Abstract
Abstract: Two new sulfate monoesters of hemibastadins-1 and -2 were isolated from the marine sponge Ianthella basta (Pallas) from Guam. A third new compound was tentatively assigned the structure 34-O-sulfatobastadin-9. The 1-O-sulfatohemibastadins-1 and –2 were antagonists of the RyR1-FKBP12 Ca2+ channel under conditions where the known compound bastadin-5 exhibits potent agonism (EC50 2μM).
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- 2004
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3. Resolution of Atropisomeric Cyclic Catechol Monoether O‑Sulfate Esters by a Molluscan Sulfatase
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Masuno, Makoto N and Molinski, Tadeusz F
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Chemical Engineering ,Materials Engineering - Abstract
Atropisomeric cyclic catechol ethers are notoriously difficult to resolve by classical chiral phase high-performance liquid chromatography. Here, we show the first application of sulfatase enzymes for the kinetic resolution of O-sulfato-catechol ethers with enantioselectivities ranging from 30 to 65% ee, as determined by preparation of their Marfey's ether derivatives. Substrate-structure dependence was briefly explored.
- Published
- 2018
4. An exploratory study to evaluate efficacy and safety of frequent Transcutaneous Electrical Stimulation for Leber Hereditary Optic Neuropathy
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Fumio Takano, Kaori Ueda, Takuji Kurimoto, Mina Arai, Takayuki Nagai, Yuko Yamada-Nakanishi, and Makoto Nakamura
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Electrical stimulation ,Leber Hereditary Optic Neuropathy ,Mitochondrial disease ,Prospective study ,Visual field ,Medicine ,Science - Abstract
Abstract Electrical stimulation (ES) may be effective for intractable retinal or optic nerve diseases. We studied frequent transcutaneous ES in a single-center, single-arm prospective study in patients with Leber hereditary optic neuropathy (LHON) who carry the mitochondrial (mt) 11778 G > A mutation. A 30-min ES was applied to either eye every other day for 12 weeks. The primary outcome was the difference in the logarithm of the minimum angle of resolution (LogMAR) at baseline and 1 week after completion of ES treatment. The secondary outcomes included changes in visual field; LogMAR; critical flicker frequency; and inner retinal thickness. Safety endpoints included the corneal endothelial cell density and complications during ES. Fourteen patients participated in the study; four dropped out. The median (interquartile range) LogMAR values before stimulation and 1, 4, and 8 weeks after ES were 1.60 (1.45–1.80), 1.70 (1.35–1.80), 1.60 (1.43–1.73), and 1.50 (1.43–1.73), respectively, indicating no significant improvement (primary outcome: Wilcoxon’s signed rank test, p = 1.000, secondary outcome: Friedman test, p = 0.229). There were no improvements in any secondary efficacy endpoints and no complications. In conclusion, frequent transcutaneous ES did not improve visual acuity in patients with LHON carrying the mt11778 G > A mutation.
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- 2025
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5. Altermagnetic perovskites
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Makoto Naka, Yukitoshi Motome, and Hitoshi Seo
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Electronics ,TK7800-8360 ,Technology (General) ,T1-995 - Abstract
Abstract Altermagnet is a class of antiferromagnets, which shows a staggered spin ordering with wave vector q = 0, while its net magnetization is canceled out in the limit of zero relativistic spin-orbit coupling. The simplest case is when the up and down spins are ordered on two crystallographically equivalent sublattice sites within the unit cell that are not connected by translation, and consequently, the system breaks the macroscopic time-reversal symmetry. Accordingly, it exhibits non-relativistic spin splitting in the energy band and characteristic cross-correlation phenomena between spin, charge, and lattice (orbital) degrees of freedom. This is in contrast to conventional Néel-type antiferromagnets with q ≠ 0 conserving the macroscopic time-reversal symmetry, where the time-reversal operation flipping of spins combined with translation can make the system identical to the original state. Altermagnetism is universally latent in various magnetic materials that have been considered simple collinear-type antiferromagnets. In this article, we focus on perovskites with the chemical formula ABX 3, which are typical playgrounds for strongly correlated electron systems, and overview their altermagnetic aspects that have been overlooked in the past researches, based on microscopic model studies revealing the mechanisms of their properties. We display that a combination of a variety of antiferromagnetic ordering and the commonly-seen lattice distortions in perovskites gives rise to a non-relativistic spin splitting whose mechanism does not rely on the spin-orbit coupling and its consequent spin current generation, and the anomalous Hall effect in the presence of the spin-orbit coupling.
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- 2025
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6. Distinct microbiome dysbiosis and epigenetic anomaly in esophageal adenocarcinoma and its underlying Barrett’s esophagus
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Takuya Shijimaya, Tomomitsu Tahara, Jumpei Yamazaki, Sanshiro Kobayashi, Yasushi Matsumoto, Naohiro Nakamura, Yu Takahashi, Takashi Tomiyama, Toshiro Fukui, Tomoyuki Shibata, and Makoto Naganuma
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Barrett’s esophagus ,Esophageal adenocarcinoma ,Mucosa-associated microbiome ,DNA methylation ,RRBS ,Telomere shortening ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Interaction between host genotoxic changes and mucosa-associated microbiome (MAM) dysbiosis may have a role in various digestive cancers. We investigated MAM in Barrett’s esophagus (BE) and esophageal adenocarcinoma (EAC) progression sequence and its association with host genotoxic changes. 16S rRNA gene sequencing was performed in three different groups of biopsies from nonneoplastic BE from patients without cancer (N, normal group; n = 47) and with EAC (ADJ, adjacent group; n = 27). Endoscopic biopsies were also obtained from EAC tissues (T, tumor group; n = 22). Results were correlated with TP53 mutation, telomere length and DNA methylation of candidate genes (N33, DPYS, SLC16A12, miR124A3 and miR34bc). Genome-wide DNA methylation examined by reduced representation bisulfite sequencing (RRBS) was available for 32 samples (n = 12 for N, n = 12 for ADJ and n = 22 for T groups). Lower microbial alpha diversity measures were observed in ADJ/T groups relative to N group and associated with higher mean Z score DNA methylation of candidate genes. Specific genera (n = 16) with significant change between ADJ/T groups relative to N group occurred mostly in ADJ group (13/16) and half of them (8/16) were associated with DNA methylation status. Integrated MAM and genome-wide methylation analysis demonstrated that hyper-methylated sites, associated with lower alpha diversity measures dominantly occurred within near the transcription start site, codifying genes were involved in metabolic processes. Our result shows that microbial dysbiosis in EAC mostly occurs in adjacent BE and such dysbiosis was associated with DNA methylation status, offering support for a pathogenic role of interaction between host genotoxic changes and MAM in this tumor type.
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- 2024
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7. Successful pancreatic pseudocyst drainage using lumen-apposing metal stent for preventing re-rupture of splenic artery pseudoaneurysm
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Takashi Ito, Tsukasa Ikeura, Koh Nakamaru, Masataka Masuda, Shinji Nakayama, and Makoto Naganuma
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drainage ,pancreatic pseudocyst ,pancreatitis ,pseudoaneurysm ,ultrasonography ,Medicine ,Internal medicine ,RC31-1245 ,Specialties of internal medicine ,RC581-951 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Splenic pseudoaneurysm rupture is a serious condition that sometimes leads to death. Pseudoaneurysm rupture is often treated with transcatheter arterial embolization (TAE), after which the re-rupture rate is 18%-37%. A 59-year-old man presented with back pain, and contrast-enhanced computed tomography (CECT) revealed pancreatic tail cancer with multiple liver metastases. After three courses of chemotherapy, CECT revealed good response with shrinkage of the tumors. However, the patient had back pain and CECT revealed pancreatic pseudocyst with pseudoaneurysm rupture. He underwent angiography, wherein the splenic artery pseudoaneurysm was embolized using TAE. Subsequently, pseudocyst drainage was performed using lumen-apposing metal stent (LAMS) to prevent pseudoaneurysm re-rupture. Thereafter, the pseudocyst shrieked with decreased serum levels of C-reactive protein, allowing the patient to re-institute chemotherapy. Pseudocyst drainage using LAMS was safe and effective when the pancreatic pseudoaneurysm had a high-risk rebleeding due to exposure to pancreatic juice.
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- 2025
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8. Dupilumab-related eosinophilia in patients with severe asthma: Post-marketing surveillance in Japan
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Makoto Nagata, Ryo Yamaguchi, Makiko Usami, Mami Orimo, and Masato Ishida
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Immunologic diseases. Allergy ,RC581-607 - Published
- 2025
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9. The dual Ginzburg-Landau theory for a holographic superconductor: finite coupling corrections
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Makoto Natsuume
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AdS-CFT Correspondence ,Holography and Condensed Matter Physics (AdS/CMT) ,Black Holes ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Abstract The holographic superconductor is the holographic dual of superconductors. We recently identified the dual Ginzburg-Landau (GL) theory for a class of bulk 5-dimensional holographic superconductors (arXiv:2207.07182 [hep-th]). However, the result is the strong coupling limit or the large-N c limit. A natural question is how the dual GL theory changes at finite coupling. We identify the dual GL theory for a minimal holographic superconductor at finite coupling (Gauss-Bonnet holographic superconductor), where numerical coefficients are obtained exactly. The GL parameter κ increases at finite coupling, namely the system approaches a more Type-II superconductor like material. We also point out two potential problems in previous works: (1) the “naive” AdS/CFT dictionary, and (2) the condensate determined only from the GL potential terms. As a result, the condensate increases at finite coupling unlike common folklore.
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- 2024
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10. Neural phase picker trained on the Japan meteorological agency unified earthquake catalog
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Makoto Naoi, Koji Tamaribuchi, Kengo Shimojo, Shinya Katoh, and Shukei Ohyanagi
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Neural phase picker ,Deep learning ,Hypocenter location ,Earthquake catalog development ,Geography. Anthropology. Recreation ,Geodesy ,QB275-343 ,Geology ,QE1-996.5 - Abstract
Abstract As Japan is one of the most seismically active countries, seismic data from various institutions are shared in real time and made accessible via the Web to promote research. The Japan Meteorological Agency (JMA), in collaboration with the Ministry of Education, Culture, Sports, Science, and Technology, processes these data to compile a 'unified earthquake catalog' for use in the development of strategies for disaster prevention and public safety. Based on manual arrival-time measurements provided by the JMA, we retrained PhaseNet, the deep-learning phase picker, known as neural phase picker that has gained prominence in recent years, to promote the development of high-quality seismic catalogs in Japan. We utilized the PhaseNet architecture for our model and trained it using 6.1 million three-component seismic waveforms collected in 2014–2021. The performance of the original PhaseNet model, trained with data from California, was suboptimal when applied to routine Japanese data, particularly ocean-bottom seismometer records. Retraining the model with the JMA unified catalog and corresponding waveforms significantly enhanced its performance in picking the arrival times of regular and low-frequency earthquakes. Compared with the original PhaseNet, the dependency of the model on the type of seismic station was reduced by retraining and its performance for waveforms was improved even from stations not included in the training data set. The model performance varied with earthquake magnitude, highlighting the reliance on extensive data for small events in the training set. Compared with the conventional procedure, the model identified numerous events, particularly smaller ones with undetermined magnitudes when integrated into the routine automatic processing of the JMA. Furthermore, leveraging approximately ten times more training data than the California data set, we developed and trained PhaseNetWC, doubling the number of filter channels in each convolutional layer in comparison with those of the original PhaseNet. This modified phase picker surpassed the performance of its predecessor. The dissemination of these models is anticipated to enhance the analysis of routine observational data sets in Japan. Graphical Abstract
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- 2024
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11. Myostatin as a plausible biomarker for early stage of sarcopenic obesity
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Chisaki Ishibashi, Kaori Nakanishi, Makoto Nishida, Haruki Shinomiya, Maki Shinzawa, Daisuke Kanayama, Ryohei Yamamoto, Takashi Kudo, Izumi Nagatomo, and Keiko Yamauchi-Takihara
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Myostatin ,Sarcopenia ,Obesity ,Metabolic diseases ,Medicine ,Science - Abstract
Abstract Since sarcopenic obesity (SO) impacts negatively on our health, early detection of SO is essential. However, prevalence of SO in an apparently healthy population has not been well examined. This study aimed to elucidate the prevalence and related factors of SO in middle-aged women, and to investigate useful diagnostic criteria for SO. Body component analyses were conducted on 432 female Osaka University employees aged 30–59 during their health checkups. Healthy (H) and SO groups were defined using cutoff values of 5.7 kg/m2 for skeletal muscle mass index and 30% for percent body fat. Serum myostatin and insulin levels were additionally measured. Among 432 participants, the prevalence of SO was 6.3%. Grip strength (P
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- 2024
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12. Targeting ErbB and tankyrase1/2 prevent the emergence of drug-tolerant persister cells in ALK-positive lung cancer
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Takaaki Fujimura, Koh Furugaki, Hayato Mizuta, Satoshi Muraoka, Makoto Nishio, Jun Adachi, Ken Uchibori, Eisaku Miyauchi, Hidetoshi Hayashi, Ryohei Katayama, and Shigeki Yoshiura
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Targeting the drug tolerant persister (DTP) state in cancer cells should prevent further development of resistance mechanisms. This study explored combination therapies to inhibit alectinib-induced DTP cell formation from anaplastic lymphoma kinase–positive non-small cell lung cancer (ALK + NSCLC) patient–derived cells. After drug-screening 3114 compounds, pan-HER inhibitors (ErbB pathway) and tankyrase1/2 inhibitors (Wnt/β-catenin signaling) emerged as top candidates to inhibit alectinib-induced DTP cells growth. We confirmed knockdown of both TNKS1/2 in DTP cells recovered the sensitivity to alectinib. Further, our study suggested knockdown of TNKS1/2 increased stability of Axin1/2, which induced β-catenin degradation and decreased its nuclear translocation, thereby suppressing transcription of antiapoptotic and proliferation-related genes (survivin, c-MYC). Targeting both pathways with alectinib+pan-HER inhibitor and alectinib+TNKS1/2 inhibitor suppressed alectinib-induced DTP cells, and the triple combination almost completely prevented the appearance of DTP cells. In conclusion, combination with ALK-TKI, pan-HER and TNKS1/2 inhibitors has the potential to prevent the emergence of DTP in ALK + NSCLC.
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- 2024
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13. Platelet activation through CD62P and the formation of platelet–monocyte complexes are associated with the exacerbation of mucosal inflammation in patients with ulcerative colitis
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Yasuki Sano, Takashi Tomiyama, Naoto Yagi, Yuka Ito, Yusuke Honzawa, Tomomitsu Tahara, Tsukasa Ikeura, Toshiro Fukui, Shinji Shimoda, and Makoto Naganuma
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Ulcerative colitis ,CD62P ,Platelet–monocyte complexes ,Mayo endoscopic subscore ,CD16 ,Medicine ,Science - Abstract
Abstract Ulcerative colitis (UC) is a refractory, chronic inflammatory bowel disease of unknown etiology. Although platelets are activated in UC, their relevance in pathophysiology remains unclear. We analyzed the correlation of platelet activation and platelet–monocyte complexes (PMCs) with severity of mucosal inflammation using the Mayo endoscopic subscore (MES). Platelet activation marker, CD62P was upregulated in patients with UC compared with that in healthy controls (P
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- 2024
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14. Tofogliflozin attenuates renal lipid deposition and inflammation via PPARα upregulation mediated by miR-21a impairment in diet-induced steatohepatitic mice
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Sae Nishihara, Masahiro Koseki, Katsunao Tanaka, Takashi Omatsu, Ayami Saga, Hiroshi Sawabe, Hiroyasu Inui, Takeshi Okada, Tohru Ohama, Daisuke Okuzaki, Yoshihiro Kamada, Masafumi Ono, Makoto Nishida, Mikio Watanabe, and Yasushi Sakata
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tofogliflozin ,chronic kidney disease (ckd) ,inflammation ,peroxisome proliferator activated receptor alpha (pparα) ,micro-rna-21(mir-21) ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
We previously demonstrated hepatic, cardiac, and skin inflammation in a high-fat diet-induced steatotic liver disease (SLD) model. However, the molecular mechanism in the kidneys in this model remains unclear. It has been recently reported that SGLT2 inhibitors improve chronic kidney disease (CKD). Therefore, we used this model to evaluate the effects of tofogliflozin on renal lipid metabolism and inflammation. Male 8–10-week-old C57Bl/6 mice were fed a high-fat/high-cholesterol/high-sucrose/bile acid (HF/HC/HS/BA) diet with 0.015% tofogliflozin (Tofo group) or an HF/HC/HS/BA diet alone (SLD group). After eight weeks, serum lipid profiles, histology, lipid content, and mRNA/microRNA and protein expression levels in the kidney were examined. The Tofo group showed significant reductions in body (26.9 ± 0.9 vs. 24.5 ± 1.0 g; p < 0.001) and kidney weight compared to those of the SLD group. Renal cholesterol (9.1 ± 1.6 vs. 7.5 ± 0.7 mg/g; p < 0.05) and non-esterified fatty acid (NEFA) (12.0 ± 3.0 vs. 8.4 ± 1.5 μEq/g; p < 0.01) were significantly decreased in the Tofo group. Transmission electron microscopy revealed the presence of fewer lipid droplets. mRNA sequencing analysis revealed that fatty acid metabolism-related genes were upregulated and NFκB signaling pathway-related genes were downregulated in the Tofo group. MicroRNA sequencing analysis indicated that miR-21a was downregulated and miR-204 was upregulated in the Tofo group. Notably, the expression of PPARα, which has been known to be negatively regulated by miR-21, was significantly increased, leading to enhancing β-oxidation genes, Acox1 and Cpt1 in the Tofo group. Tofogliflozin decreased renal cholesterol and NEFA levels and improved inflammation through the regulation of PPARα and miR-21a.
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- 2024
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15. Leber hereditary optic neuropathy 'plus' with the m.14487 T>C mutation as the causality of hemidystonia: A Case Report
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Fumio Takano, Kaori Ueda, Norio Chihara, Mina Arai, Mari Sakamoto, Takuji Kurimoto, Yuko Yamada-Nakanishi, and Makoto Nakamura
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Ophthalmology ,RE1-994 - Abstract
Introduction: LHON complicated with extraocular symptoms is called LHON plus. We describe a case of Leber hereditary optic neuropathy (LHON) plus with a rare mutation, that also caused dystonia. Case Presentation: An 18-year-old male patient developed symptoms of dystonia at the age of 15 years. Two years later, he noticed decreased visual acuity and central scotoma in the left eye. One month later the same symptoms occurred in the right eye. Although the optic discs in both eyes revealed mildly redness and edematous change, no abnormal findings were detected on fluorescence fundus angiography and orbital magnetic resonance imaging. Mitochondrial deoxyribonucleic acid (mtDNA) sequencing detected the m.14487 T>C mutation. From clinical course and fundus findings, the case was diagnosed LHON. The optic nerve gradually atrophied and central scotoma remained. Conclusion: The m.14487 T>C mutation is one of the causative mutations in patients with dystonia or Leigh encephalopathy and a minor mutation in patients with LHON. However, in the present case, ocular symptoms were more severe than systematic symptoms and the disease course was consistent with LHON. For the above reasons, this case can be diagnosed as LHON plus. Whole mtDNA sequencing is important in diagnosing LHON if none of the three major mutations are detected.
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- 2024
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16. A prospective comparison of implant quality between suture-coated seeds and uncoated seeds in prostate cancer brachytherapy
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Makoto Nakiri, Naoyuki Ogasawara, Hirofumi Kurose, Kosuke Ueda, Hiroki Suekane, Katsuaki Chikui, Kiyoaki Nishihara, Keiichiro Uemura, Kazuhisa Ejima, Ryuji Hoshino, Satoshi Onishi, Keisuke Komiya, Koichiro Muraki, Chikayuki Hattori, Etsuyo Ogo, Tatsuya Ishitake, and Tsukasa Igawa
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brachytherapy ,prostate cancer ,suture-coated seed ,uncoated seed ,Medicine - Published
- 2024
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17. Allergen immunotherapy in asthma
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Kazuyuki Nakagome and Makoto Nagata
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Allergen immunotherapy ,Allergic rhinitis ,Bronchial asthma ,Subcutaneous immunotherapy ,Sublingual immunotherapy ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Allergen immunotherapy (AIT), including SCIT and SLIT, is a treatment that involves the administration of allergens to which patients with allergic diseases have been sensitized. HDM-SCIT for asthma is indicated in cases of HDM-sensitized allergic asthma with normal lung function. HDM-SCIT improves asthma symptoms and AHR, and decreases the medication dose. Importantly, AIT can improve other allergic diseases complicated by asthma, such as allergic rhinitis, which can also contribute to the improvement of asthma symptoms. Several studies have suggested that HDM-SLIT also attenuates the risk of asthma exacerbations, and improves lung function in asthma cases with allergic rhinitis. Furthermore, AIT can modify the natural course of allergic diseases, including asthma. For example, the effects of AIT are maintained for at least several years after treatment discontinuation. AIT can prevent the onset of asthma when introduced in allergic rhinitis, and can also inhibit or reduce new allergen sensitizations. Recent data have suggested that AIT may suppress non-targeted allergen-induced immune responses in addition to targeted allergen-induced responses, and suppress infections of the lower respiratory tract by enhancing IFN responses.
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- 2024
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18. A method of 'Noninjecting Resection using Bipolar Soft coagulation mode; NIRBS' for superficial non-ampullary duodenal epithelial tumor: a pilot study
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Mitsuo Tokuhara, Yasushi Sano, Yoshifumi Watanabe, Hidetoshi Nakata, Hiroko Nakahira, Shingo Furukawa, Takuya Ohtsu, Naohiro Nakamura, Takashi Ito, Ikuko Torii, Takeshi Yamashina, Masaaki Shimatani, and Makoto Naganuma
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Bipolar snare ,Noninjecting ,Soft coagulation mode ,Superficial nonampullary duodenal epithelial tumor ,SNADET ,Duodenal lesion ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background Complete endoscopic resection of superficial non-ampullary duodenal epithelial tumors (SNADETs) is technically difficult, especially with an extremely high risk of adverse event (AE), although various endoscopic resection methods including endoscopic mucosal resection (EMR), underwater EMR (UEMR), and endoscopic submucosal dissection (ESD) have been tried for SNADETs. Accordingly, a novel simple resection method that can completely resect tumors with a low risk of AEs should be developed. Aims A resection method of Noninjecting Resection using Bipolar Soft coagulation mode (NIRBS) which has been reported to be effective and safe for colorectal lesions is adapted for SNADETs. In this study we evaluated its effectiveness, safety, and simplicity for SNADETs measuring ≤ 20 mm. Results This study included 13 patients with resected lesions with a mean size of 7.8 (range: 3–15) mm. The pathological distributions of the lesions were as follows: adenomas, 77% (n = 10) and benign and non-adenomatous lesions, 23% (n = 3). The en bloc and R0 resection rate was 100% (n = 13). The median procedure duration was 68 s (32–105). None of the patients presented with major AEs including bleeding and perforation. Conclusions Large studies such as prospective, randomized, and controlled trials should be conducted for the purpose of validating effectiveness, safety, and simplicity of the NIRBS for SNADETs measuring ≤ 20 mm suggested in this study.
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- 2024
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19. Direct repair of the chronic ochronotic Achilles tendon rupture: a case report
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Takuji Yokoe, Makoto Nagasawa, Takuya Tajima, Nami Yamaguchi, Tomomi Ota, Yudai Morita, and Etsuo Chosa
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Alkaptonuria ,Chronic Achilles tendon tear ,Surgery ,Repair ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background Alkaptonuria (AKU) is a rare hereditary disease. Ochronotic arthropathy, tendinopathy, and osteopenia/osteoporosis are generally musculoskeletal manifestations in patients with AKU. Because of the ochronotic tendinopathy and osteopenia, the surgical strategy for chronic ochronotic Achilles tendon rupture may be challenging. No studies have reported the surgical treatment of chronic Achilles tendon rupture in patients with AKU. Case presentation We report a case of AKU that required surgical treatment for chronic Achilles tendon rupture. A 60-year-old woman was referred to our department for the assessment of left hindfoot pain that persisted for more than nine months after an ankle sprain. Three years prior to the first presentation to our hospital, she was diagnosed with AKU due to pigmented hip cartilage at the time of total hip arthroplasty. The patient was diagnosed as chronic Achilles tendon rupture based on the results of physical examination and magnetic resonance imaging (MRI). The MRI showed enlarged scar tissue of the Achilles tendon with an intrasubstance high signal intensity. We performed resection of the central part of the scar tissue (total length, 24 mm) followed by direct repair using the proximal and distal stumps of the scar tissue. The MRI at 12months after surgery showed continuity of the repaired Achilles tendon. At 18 months after surgery, the Achilles Tendon Total Rupture Score improved from 22 points preoperatively to 84 points postoperatively. The foot and ankle outcome score also improved. Conclusions We reported a case of AKU with chronic Achilles tendon rupture in which direct repair using scar tissue between the tendon stumps was effective. Careful selection of the surgical procedure for the treatment of chronic ochronotic Achilles tendon rupture is recommended because of concomitant ochronotic tendinopathy and osteopenia/osteoporosis.
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- 2024
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20. Ribosomal S6 kinase (RSK) plays a critical role in DNA damage response via the phosphorylation of histone lysine demethylase KDM4B
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Wenwen Wu, Jing Zhu, Naoe Taira Nihira, Yukiko Togashi, Atsushi Goda, Junki Koike, Kiyoshi Yamaguchi, Yoichi Furukawa, Takuya Tomita, Yasushi Saeki, Yoshikazu Johmura, Makoto Nakanishi, Yasuo Miyoshi, and Tomohiko Ohta
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Ribosomal S6 kinase ,RSK ,KDM4B ,DNA damage ,Ionizing radiation ,Breast cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Epigenetic dysregulation affecting oncogenic transcription and DNA damage response is a hallmark of cancer. The histone demethylase KDM4B, a factor regulating these processes, plays important roles in estrogen receptor-mediated transcription and DNA repair in breast cancer. However, how oncogenic phospho-signal transduction affects epigenetic regulation is not fully understood. Here we found that KDM4B phosphorylation by ribosomal S6 kinase (RSK), a downstream effector of the Ras/MAPK pathway, is critical for the function of KDM4B in response to DNA damage. Methods KDM4B-knockout breast cancer cell lines were generated via CRISPR/Cas9-mediated gene editing. Re-expression of wild-type or phospho-site mutated KDM4B in knockout cells was performed by lentivirus-mediated gene transfer. Gene knockdown was achieved by RNA interference. DNA double-strand breaks (DSBs) were induced by ionizing radiation or laser-microirradiation. Protein accumulation at DSB sites was analyzed by immunofluorescence. KDM4B phosphorylation by RSK was assessed by in vitro and in vivo kinase assays. Gene and protein expression levels were analyzed by RT‒PCR and western blotting. The sensitivity of cells to ionizing radiation was examined by a clonogenic survival assay. Results RSK phosphorylated KDM4B at Ser666, and inhibition of the phosphorylation by RSK depletion or RSK inhibitors abrogated KDM4B accumulation at the sites of DNA double-strand breaks (DSBs). DSB repair was significantly delayed in KDM4B-knockout cells or cells treated with RSK inhibitors. The replacement of endogenous KDM4B with the phosphomimetic mutant S666D restored KDM4B accumulation and DSB repair that had been inhibited by RSK inhibitors, suggesting a critical role for RSK at the specific serine residue of KDM4B in the effect of RSK inhibitors on DSB repair. As a consequence of these aberrant responses, inhibition of KDM4B phosphorylation increased the sensitivity of the cells to ionizing radiation. Conclusions Overall, the present study uncovered a novel function of RSK on the DNA damage response, which provides an additional role of its inhibitor in cancer therapy.
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- 2024
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21. Single cell analysis of Idh mutant growth plates identifies cell populations responsible for longitudinal bone growth and enchondroma formation
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Vijitha Puviindran, Eijiro Shimada, Zeyu Huang, Xinyi Ma, Ga I. Ban, Yu Xiang, Hongyuan Zhang, Jianhong Ou, Xiaolin Wei, Makoto Nakagawa, John Martin, Yarui Diao, and Benjamin A. Alman
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Medicine ,Science - Abstract
Abstract Enchondromas are a common tumor in bone that can occur as multiple lesions in enchondromatosis, which is associated with deformity of the affected bone. These lesions harbor somatic mutations in IDH and driving expression of a mutant Idh1 in Col2 expressing cells in mice causes an enchondromatosis phenotype. Here we compared growth plates from E18.5 mice expressing a mutant Idh1 with control littermates using single cell RNA sequencing. Data from Col2 expressing cells were analysed using UMAP and RNA pseudo-time analyses. A unique cluster of cells was identified in the mutant growth plates that expressed genes known to be upregulated in enchondromas. There was also a cluster of cells that was underrepresented in the mutant growth plates that expressed genes known to be important in longitudinal bone growth. Immunofluorescence showed that the genes from the unique cluster identified in the mutant growth plates were expressed in multiple growth plate anatomic zones, and pseudo-time analysis also suggested these cells could arise from multiple growth plate chondrocyte subpopulations. This data supports the notion that a subpopulation of chondrocytes become enchondromas at the expense of contributing to longitudinal growth.
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- 2024
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22. Variations of dissolved trace elements in precipitation and stream water in Japanese forest area: additional evidence of changing air pollution in the region
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Masayuki Morohashi, Tatsuyoshi Saito, Masaaki Takahashi, Yayoi Inomata, Makoto Nakata, Masaki Ohno, Tomohiro Kose, Tsuyoshi Ohizumi, Ki-Cheol Shin, Ichiro Tayasu, and Hiroyuki Sase
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Trace element ,Heavy metal ,Wet deposition ,Forest ,Catchment ,Environmental technology. Sanitary engineering ,TD1-1066 ,Environmental sciences ,GE1-350 - Abstract
Abstract Trace elements released into the atmosphere by human activities, such as fossil fuel combustion, flow into forest ecosystems via wet and dry deposition and can flow out via mountainous stream water. The Kajikawa catchment site in Niigata Prefecture, located on the Sea of Japan side in central Japan, suffers from large amounts of acidic substance deposition due to its geographical conditions and meteorological seasonality and is affected by transboundary air pollution originating from the Asian continent due to northwesterly seasonal winds in winter. This study determined the concentrations of trace elements dissolved in precipitation and stream water to comprehensively evaluate the effects of transboundary air pollution on forest ecosystems. The results showed that the concentrations of trace elements and major inorganic ions in precipitation tended to be high in winter and low in summer. The fluxes of many trace elements also increased in winter, reflecting high precipitation amount. Except for Sr, the enrichment factors of the highly enriched trace elements did not show clear seasonality. Therefore, they were continuously influenced by anthropogenic activities. Furthermore, the stable Pb isotope ratio changed significantly during the observation period; however, this was not explained by seasonal changes. This study revealed that trace elements are transported to the Sea of Japan side in central Japan, especially in winter; however, their quantity and content change in response to changes in local and transboundary air pollution. Graphical Abstract
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- 2024
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23. Assessment of transthyretin instability in patients with wild-type transthyretin amyloid cardiomyopathy
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Takuya Iino, Manabu Nagao, Hidekazu Tanaka, Sachiko Yoshikawa, Junko Asakura, Makoto Nishimori, Masakazu Shinohara, Amane Harada, Shunsuke Watanabe, Tatsuro Ishida, Ken-ichi Hirata, and Ryuji Toh
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Transthyretin ,Wild-type transthyretin amyloid cardiomyopathy ,Heart failure ,Heart failure with preserved ejection fraction ,Aging ,Medicine ,Science - Abstract
Abstract The pathophysiology of variant transthyretin (TTR) amyloidosis (ATTRv) is associated with destabilizing mutations in the TTR tetramer. However, why TTR with a wild-type genetic sequence misfolds and aggregates in wild-type transthyretin amyloidosis (ATTRwt) is unknown. Here, we evaluate kinetic TTR stability with a newly developed ELISA system in combination with urea-induced protein denaturation. Compared with that in control patients, endogenous TTR in patients with wild-type transthyretin amyloid cardiomyopathy (ATTRwt-CM) exhibited thermodynamic instability, indicating that circulating TTR instability may be associated with the pathogenesis of ATTRwt as well as ATTRv. Our findings provide new insight into the underlying mechanisms of ATTRwt.
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- 2024
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24. Clinical utility of rapid on-site evaluation of brush cytology during bronchoscopy using endobronchial ultrasound with a guide sheath
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Kazuhiro Nishiyama, Kei Morikawa, Shotaro Kaneko, Makoto Nishida, Aya Matsushima, Yoshihiro Nishi, Yu Numata, Yusuke Shinozaki, Hajime Tsuruoka, Hirotaka Kida, Hiroshi Handa, Naoki Shimada, Chie Okawa, Nobuyuki Ohike, Junki Koike, and Masamichi Mineshita
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Rapid on-site evaluation ,Endobronchial ultrasound with a guided sheath ,Peripheral lung lesions ,Brushing ,Medicine ,Science - Abstract
Abstract Previous studies have shown that rapid on-site evaluation (ROSE) improves the diagnostic yield of bronchoscopy using endobronchial ultrasound with a guide sheath (EBUS-GS) for peripheral pulmonary lesions (PPL). While ROSE of imprint cytology from forceps biopsy has been widely discussed, there are few reports on ROSE of brush cytology. This study investigated the utility of ROSE of brush cytology during bronchoscopy. We retrospectively analyzed data from 214 patients who underwent bronchoscopy with EBUS-GS for PPL. The patients in the ROSE group had significantly higher diagnostic sensitivity through the entire bronchoscopy process than in the non-ROSE group (96.8% vs. 83.3%, P = 0.002). The use of ROSE significantly increased the sensitivity of brush cytology with Papanicolaou staining (92.9% vs. 75.0%, P
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- 2024
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25. Postnatal weight loss and neurodevelopmental outcomes at age 3 years in extremely preterm infants: a cohort study
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Kei Tamai, Naomi Matsumoto, Takashi Yorifuji, Akihito Takeuchi, Makoto Nakamura, and Misao Kageyama
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Weight loss ,Neurodevelopment ,Extremely preterm ,Mortality ,Developmental impairment ,Pediatrics ,RJ1-570 - Abstract
Abstract Background Previous research has suggested a correlation between postnatal maximum weight loss (MWL) and both neonatal mortality and morbidities in extremely preterm infants. However, the relationship between MWL and neurodevelopmental outcomes remains underexplored. Methods In a single-center, retrospective cohort study at Okayama Medical Center, we evaluated data from extremely preterm infants admitted to the neonatal intensive care unit from 2010 to 2020. Infants who died within the first 10 days of life were excluded. MWL in the first 10 days was the main exposure, categorized into three groups: >15%, 5–15%, and 15% MWL group, 71 in the 5–15% group, and 24 in the 15% MWL; 26.1 weeks and 818 g for 5–15% MWL; and 26.0 weeks and 734 g for 15% (RR 1.32, 95% CI 1.00–1.75) and
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- 2024
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26. Estimating fish stock biomass using a Bayesian state-space model: accounting for catchability change due to technological progress
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Makoto Nishimoto, Yoshinori Aoki, Naoto Matsubara, Paul Hamer, and Yuichi Tsuda
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fish stock management ,hierarchical Bayesian model ,population model ,skipjack ,uncertainty ,catchability ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
The assessment of trends in fish stocks using long-term time-series data is important for effective fisheries resource management. Despite technological advancements in recent decades, the resulting increase in fisheries catch potential with applied effort is often not adequately considered in stock assessments. To address this gap, we developed a framework for simultaneously estimating catchability and biomass using a state-space population model. This model allows for the flexible integration of the timing and functional form of the uptake of technological innovations that are assumed to influence catchability. Our objective was to test the effectiveness of this framework by applying it to 48 years of skipjack pole-and-line fishery data in Japanese waters. We utilized two population models, the Ricker-type and Gompertz-type, under three different scenarios of technology-driven catchability changes: constant, exponential, and S-shaped. The results indicate that the calculations converged for the constant and S-shaped scenarios, and that both the Ricker and Gompertz models performed almost equally well in terms of the goodness of fit and prediction accuracy under the S-shaped scenario, which assumes time-varying catchability. Although time-varying catchability poses challenges for accurate biomass estimation due to the large range of uncertainty, the decreasing trend in stock status is still detected. The estimated recent decline in the skipjack stock around Japan provides a warning for stock assessments that do not incorporate technological progress, despite the species’ high natural population growth rate and presumed stable stock status. Our methodology, based on publicly available archived catch records (catch and effort), can be applied to other species with known timelines of technological innovation.
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- 2024
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27. A hierarchical Bayesian approach for identifying socioeconomic factors influencing self-rated health in Japan
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Makoto Nakakita and Teruo Nakatsuma
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Bayesian statistics ,Markov chain Monte Carlo ,Hierarchical panel data logit model ,Self-rated health ,Demographic attributes ,Socioeconomic conditions ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
This study identifies socioeconomic factors that potentially influence self-rated health (SRH), an important indicator of health status, in the Japanese population. We used a panel data logit model to simultaneously estimate the effects of personal attributes, living environment, and social conditions. To achieve a stable estimation of the panel data logit model, we applied hierarchical Bayesian modeling and the Markov Chain Monte Carlo (MCMC) method to obtain its estimation. Furthermore, we used the ancillary-sufficiency interweaving strategy (ASIS) algorithm to improve the efficiency of the MCMC method for the panel data logit model. The results indicate that SRH within the Japanese population is affected by demographic and socioeconomic factors (e.g., age, marital status, educational background, and employment status) and daily habits such as frequency of drinking alcohol. We also obtained results that differed from previous studies in the research literature. Differences in the national character among countries may be reflected in these results. Since SRH is a subjective measure of health status and often differs from actual health status, it is crucial to remove the influences of the national character on SRH in evaluating the actual health status of individuals within a population. The study findings provide important insights into addressing these factors to understand SRH in the Japanese context better.
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- 2024
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28. Investigation of the optical and electrical properties of zinc oxide by terahertz time domain ellipsometry
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Zixi Zhao, Verdad C. Agulto, Toshiyuki Iwamoto, Kosaku Kato, Kohei Yamanoi, Toshihiko Shimizu, Nobuhiko Sarukura, Takashi Fujii, Tsuguo Fukuda, Masashi Yoshimura, and Makoto Nakajima
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Terahertz ,Ellipsometry ,Zinc oxide ,Semiconductor characterization ,Applied optics. Photonics ,TA1501-1820 ,Optics. Light ,QC350-467 - Abstract
In order to demonstrate the application of terahertz time-domain ellipsometry (THz-TDE) in the characterization of wide-bandgap semiconductors, we studied two zinc oxide (ZnO) single crystals with different conductivities. The optical properties of ZnO samples with low conductivity and high conductivity are both obtained by ellipsometric parameters, while the electrical properties of ZnO sample with high conductivity are well deduced and fitted using the Drude model. These results suggest that THz-TDE can effectively obtain the optical and electrical properties of wide-gap semiconductors and can be used to characterize semiconductors with carrier densities higher than 1016 cm−3.
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- 2024
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29. Combination of reduced post‐transplant cyclophosphamide and early tacrolimus initiation increases the incidence of chronic graft‐versus‐host disease in human leukocyte antigen‐haploidentical peripheral blood stem‐cell transplantation
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Toshiki Terao, Takumi Kondo, Makoto Nakamura, Hiroki Takasuka, Hideaki Fujiwara, Noboru Asada, Daisuke Ennishi, Hisakazu Nishimori, Keiko Fujii, Nobuharu Fujii, Yoshinobu Maeda, and Ken‐ichi Matsuoka
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chronic GVHD ,haploidentical ,hematopoietic stem‐cell transplantation ,PTCy ,tacrolimus ,Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Abstract We evaluated the clinical impacts of the concurrent modification of post‐transplant cyclophosphamide (PTCy) dose and tacrolimus (Tac)‐initiation timing in 61 patients with human leukocyte antigen‐haploidentical transplantation. Reduced‐dose PTCy (80 mg/kg) was associated with a higher incidence of moderate‐to‐severe chronic graft‐versus‐host disease (GVHD) than standard‐dose PTCy (100 mg/kg) (35.0% vs. 26.6%, p = 0.053). Notably, early‐initiation Tac (day ‐1) increased moderate‐to‐severe chronic GVHD than standard‐initiation Tac (day 5) in the reduced‐dose PTCy group (p = 0.032), whereas Tac‐initiation timing did not impact chronic GVHD in the standard‐dose PTCy group. These data indicate that the combination of reduced‐dose PTCy and early‐initiation Tac can amplify chronic GVHD.
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- 2024
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30. Development of novel humanized VHH synthetic libraries based on physicochemical analyses
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Makoto Nakakido, Seisho Kinoshita, and Kouhei Tsumoto
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Medicine ,Science - Abstract
Abstract Due to the high affinity and specificity of antibodies toward antigens, various antibody-based applications have been developed. Recently, variable antigen-binding domains of heavy-chain antibodies (VHH) have become an attractive alternative to conventional fragment antibodies due to their unique molecular characteristics. As an antibody-generating strategy, synthetic VHH libraries (including humanized VHH libraries) have been developed using distinct strategies to constrain the diversity of amino acid sequences. In this study, we designed and constructed several novel synthetic humanized VHH libraries based on biophysical analyses conducted using the complementarity determining region-grafting method and comprehensive sequence analyses of VHHs deposited in the protein data bank. We obtained VHHs from the libraries, and hit clones exhibited considerable thermal stability. We also found that VHHs from distinct libraries tended to have different epitopes. Based on our results, we propose a strategy for generating humanized VHHs with distinct epitopes toward various antigens by utilizing our library combinations.
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- 2024
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31. Microbiome of esophageal endoscopic wash samples is associated with resident flora in the esophagus and incidence of cancer
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Takuya Shijimaya, Tomomitsu Tahara, Jumpei Yamazaki, Sanshiro Kobayashi, Yasushi Matsumoto, Naohiro Nakamura, Yu Takahashi, Takashi Tomiyama, Toshiro Fukui, Tomoyuki Shibata, and Makoto Naganuma
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Esophageal carcinoma ,Microbiome ,Esophageal endoscopic wash ,16S rRNA ,Diagnosis ,Medicine ,Science - Abstract
Abstract Change in mucosal microbiome is associated with various types of cancer in digestive tract. We hypothesized that microbial communities in the esophageal endoscopic wash fluids reflects resident flora in esophageal mucosa that is associated with esophageal carcinoma (EC) risk and/or directly correlates microbiome derived from EC tumor tissue. Studying microbial communities in esophageal endoscopic wash samples would be therefore useful to predict the incidence or risk of EC. We examined microbial communities of the endoscopic wash samples from 45 primary EC and 20 respective non-EC controls using 16S rRNA V3-V4 amplicon sequencing. The result was also compared with microbial communities in matched endoscopic biopsies from EC and non-cancerous esophageal mucosa. Compared with non-EC controls, 6 discriminative bacterial genera were detected in EC patients. Among them, relative abundance ratio of Prevotella and Shuttlewarthia, as well as decrease of genus Prevotella presented good prognostic performance to discriminate EC from controls (area under curve, 0.86, 0.82, respectively). Multivariate analysis showed occurrence of EC was an independent factor associated with decrease of this bacteria. Abundance of genus Prevotella in the esophageal endoscopic wash samples was significantly correlated with the abundance of this bacteria in the matched endoscopic biopsies from non-cancerous esophageal mucosa but not in the EC tissues. Our findings suggest that microbiome composition in the esophageal endoscopic wash samples reflects resident flora in the esophagus and significantly correlates with the incidence of EC.
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- 2024
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32. Identification of multiple inter- and intra-genotype reassortment mammalian orthoreoviruses from Japanese black cattle in a beef cattle farm
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Mami Oba, Mayo Shimotori, Natsuko Teshima, Tomoko Yokota, Hitoshi Takemae, Shoichi Sakaguchi, Shuntaro Mizuno, Hiroho Ishida, Hironobu Murakami, Tetsuya Mizutani, and Makoto Nagai
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Mammalian orthoreovirus ,Cattle ,Reassortment ,Genotype ,Medicine ,Science - Abstract
Abstract Mammalian orthoreoviruses (MRVs), belonging to the genus Orthoreovirus in the family Spinareoviridae, possess a double-stranded RNA segmented genome. Due to the segmented nature of their genome, MRVs are prone to gene reassortment, which allows for evolutionary diversification. Recently, a genotyping system for each MRV gene segment was proposed based on nucleotide differences. In the present study, MRVs were isolated from the fecal samples of Japanese Black cattle kept on a farm in Japan. Complete genome sequencing and analysis of 41 MRV isolates revealed that these MRVs shared almost identical sequences in the L1, L2, L3, S3, and S4 gene segments, while two different sequences were found in the S1, M1, M2, M3, and S2 gene segments. By plaque cloning, at least six genetic constellation patterns were identified, indicating the occurrence of multiple inter- (S1 and M2) and intra- (M1, M3, and S2) reassortment events. This paper represents the first report describing multiple reassortant MRVs on a single cattle farm. These MRV gene segments exhibited sequence similarity to those of MRVs isolated from cattle in the U.S. and China, rather than to MRVs previously isolated in Japan. Genotypes consisting solely of bovine MRVs were observed in the L1, M1, and M2 segments, suggesting that they might have evolved within the cattle population.
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- 2024
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33. Inhibition of TOPORS ubiquitin ligase augments the efficacy of DNA hypomethylating agents through DNMT1 stabilization
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Satoshi Kaito, Kazumasa Aoyama, Motohiko Oshima, Akiho Tsuchiya, Makiko Miyota, Masayuki Yamashita, Shuhei Koide, Yaeko Nakajima-Takagi, Hiroko Kozuka-Hata, Masaaki Oyama, Takao Yogo, Tomohiro Yabushita, Ryoji Ito, Masaya Ueno, Atsushi Hirao, Kaoru Tohyama, Chao Li, Kimihito Cojin Kawabata, Kiyoshi Yamaguchi, Yoichi Furukawa, Hidetaka Kosako, Akihide Yoshimi, Susumu Goyama, Yasuhito Nannya, Seishi Ogawa, Karl Agger, Kristian Helin, Satoshi Yamazaki, Haruhiko Koseki, Noriko Doki, Yuka Harada, Hironori Harada, Atsuya Nishiyama, Makoto Nakanishi, and Atsushi Iwama
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Science - Abstract
Abstract DNA hypomethylating agents (HMAs) are used for the treatment of myeloid malignancies, although their therapeutic effects have been unsatisfactory. Here we show that CRISPR-Cas9 screening reveals that knockout of topoisomerase 1-binding arginine/serine-rich protein (TOPORS), which encodes a ubiquitin/SUMO E3 ligase, augments the efficacy of HMAs on myeloid leukemic cells with little effect on normal hematopoiesis, suggesting that TOPORS is involved in resistance to HMAs. HMAs are incorporated into the DNA and trap DNA methyltransferase-1 (DNMT1) to form DNA-DNMT1 crosslinks, which undergo SUMOylation, followed by proteasomal degradation. Persistent crosslinking is cytotoxic. The TOPORS RING finger domain, which mediates ubiquitination, is responsible for HMA resistance. In TOPORS knockout cells, DNMT1 is stabilized by HMA treatment due to inefficient ubiquitination, resulting in the accumulation of unresolved SUMOylated DNMT1. This indicates that TOPORS ubiquitinates SUMOylated DNMT1, thereby promoting the resolution of DNA-DNMT1 crosslinks. Consistently, the ubiquitination inhibitor, TAK-243, and the SUMOylation inhibitor, TAK-981, show synergistic effects with HMAs through DNMT1 stabilization. Our study provides a novel HMA-based therapeutic strategy that interferes with the resolution of DNA-DNMT1 crosslinks.
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- 2024
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34. Comparative Analysis of Japanese Rice Wine Export Trends: Large Firms in the Nada Region vs. SMEs in Other Regions
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Wakuo Saito, Makoto Nakakita, and Teruo Nakatsuma
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Japanese sake ,export ,trend ,UNESCO ,Bayesian analysis ,panel data ,Social Sciences - Abstract
In recent decades, Japanese rice wine, sake, exports to international countries have developed tremendously. Recently, in particular, sake exports are increasing in both volume and unit value due to factors such as the registration of Japanese cuisine as an intangible cultural heritage of UNESCO in 2013 and the economic situations including the rapid depreciation of Japanese yen. However, there are no studies which investigated sake exports via empirical methods as far as we know. In this study, we constructed hierarchical Bayesian models and analyzed unbalanced panel datasets on the export of Japanese sake to China, Hong Kong SAR China, Singapore, Taiwan and the US by using a Markov chain Monte Carlo (MCMC) method and an ancillary-sufficiency interweaving strategy (ASIS) as the first empirical study of Japanese sake export. As a result, it was found that the trends in export volume and unit value to China, Hong Kong SAR China, Singapore and the US were significantly positive. In addition, although Taiwan had a negative trend before UNESCO registration, the trend became positive after its registration. Based on these results, it can be concluded that Japanese sake has been booming worldwide, though the degree may vary from country to country. Especially, we found that the UNESCO registration of Japanese food, Washoku, has significant effects on booming sake exports both in terms of volume and unit value. Finally, we divided the sake export data by regional customs offices in charge and conducted a detailed analysis on regional heterogeneity in sake exports. From the results, we found there were some different trends among regions.
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- 2024
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35. Three-year prognosis after low-dose oral food challenge for children with wheat allergy
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Takaaki Itonaga, Noriyuki Yanagida, Ken-ichi Nagakura, Tomoyuki Asaumi, Mai Tokunaga, Makoto Nishino, Kyohei Takahashi, Kiyotake Ogura, Sakura Sato, and Motohiro Ebisawa
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Allergens ,Child ,Food hypersensitivity ,Prognosis ,Wheat hypersensitivity ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Background: Low-dose oral food challenge (LD-OFC) is an approach to avoid complete elimination in high-risk patients with wheat allergy (WA). We examined the 3-year prognosis after LD-OFC among patients who passed and failed LD-OFC. Methods: Children with immediate-type WA aged ≤6 years with a history of reaction to ≤390 mg of wheat protein underwent their first LD-OFC with 52 mg (baseline LD-OFC). After passing the LD-OFC, children stepped up to 390, 1300, and 5200 mg step-by-step every 3–6 months. After failing LD-OFC, children repeated LD-OFC every 6–12 months. We assessed wheat tolerance defined as consuming 5200 mg without symptoms for 3 years after baseline LD-OFC. Results: The median age of 124 children was 2.4 years, and the wheat- and ω-5-gliadin-specific immunoglobulin E (IgE) levels (kUA/L) were 23.6 and 2.1, respectively. Upon baseline LD-OFC, 57% passed (LD-tolerant), whereas 43% failed (LD-reactive). Within 3 years, 38% of the LD-reactive group passed re-administered LD-OFC, and 70% of all participants avoided complete elimination. The percentage of the participants who became capable of consuming 390 mg (87% vs. 18%), 1300 mg (78% vs. 13%), and acquired tolerance (70% vs. 13%) was significantly higher in the LD-tolerant group than in the LD-reactive group (p
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- 2024
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36. PAK4 inhibition augments anti-tumour effect by immunomodulation in oral squamous cell carcinoma
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Danki Takatsuka, Hidetake Tachinami, Nihei Suzuki, Manabu Yamazaki, Amirmoezz Yonesi, Mayu Takaichi, Shuichi Imaue, Shin-Ichi Yamada, Jun-Ichi Tanuma, Makoto Noguchi, and Kei Tomihara
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Medicine ,Science - Abstract
Abstract Oral squamous cell carcinoma (OSCC) is one of the most common malignant tumours, warranting novel treatments. Here, we examined the therapeutic efficacy of inhibiting p21 activated kinase 4 (PAK4) in OSCC and determined its immunomodulatory effect by focusing on the enhancement of anti-tumour effects. We examined PAK4 expression in OSCC cells and human clinical samples and analysed the proliferation and apoptosis of OSCC cells following PAK4 inhibition in vitro. We also investigated the effects of in vivo administration of a PAK4 inhibitor on immune cell distribution and T-cell immune responses in OSCC tumour-bearing mice. PAK4 was detected in all OSCC cells and OSCC tissue samples. PAK4 inhibitor reduced the proliferation of OSCC cells and induced apoptosis. PAK4 inhibitor significantly attenuated tumour growth in mouse and was associated with increased proportions of IFN-γ-producing CD8+ T-cells. Furthermore, PAK4 inhibitor increased the number of dendritic cells (DCs) and up-regulated the surface expression of various lymphocyte co-stimulatory molecules, including MHC-class I molecules, CD80, CD83, CD86, and CD40. These DCs augmented CD8+ T-cell activation upon co-culture. Our results suggest that PAK4 inhibition in OSCC can have direct anti-tumour and immunomodulatory effects, which might benefit the treatment of this malignancy.
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- 2024
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37. Structure of human DPPA3 bound to the UHRF1 PHD finger reveals its functional and structural differences from mouse DPPA3
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Nao Shiraishi, Tsuyoshi Konuma, Yoshie Chiba, Sayaka Hokazono, Nao Nakamura, Md Hadiul Islam, Makoto Nakanishi, Atsuya Nishiyama, and Kyohei Arita
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Biology (General) ,QH301-705.5 - Abstract
Abstract DNA methylation maintenance is essential for cell fate inheritance. In differentiated cells, this involves orchestrated actions of DNMT1 and UHRF1. In mice, the high-affinity binding of DPPA3 to the UHRF1 PHD finger regulates UHRF1 chromatin dissociation and cytosolic localization, which is required for oocyte maturation and early embryo development. However, the human DPPA3 ortholog functions during these stages remain unclear. Here, we report the structural basis for human DPPA3 binding to the UHRF1 PHD finger. The conserved human DPPA3 85VRT87 motif binds to the acidic surface of UHRF1 PHD finger, whereas mouse DPPA3 binding additionally utilizes two unique α-helices. The binding affinity of human DPPA3 for the UHRF1 PHD finger was weaker than that of mouse DPPA3. Consequently, human DPPA3, unlike mouse DPPA3, failed to inhibit UHRF1 chromatin binding and DNA remethylation in Xenopus egg extracts effectively. Our data provide novel insights into the distinct function and structure of human DPPA3.
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- 2024
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38. Intracardiac air bubbles in a neonate with necrotizing enterocolitis
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Yu Fukushima, Kei Tamai, Shigehiro Mori, Akihito Takeuchi, Makoto Nakamura, and Misao Kageyama
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Pediatrics ,RJ1-570 - Published
- 2025
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39. J-TAIL-2: A Prospective, Observational Study of Atezolizumab Combined With Carboplatin and Etoposide in Patients With Extensive-Stage SCLC in Japan
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Eisaku Miyauchi, MD, PhD, Makoto Nishio, MD, PhD, Kadoaki Ohashi, MD, PhD, Atsushi Osoegawa, MD, PhD, Eiki Kikuchi, MD, PhD, Hideharu Kimura, MD, PhD, Yasushi Goto, MD, PhD, Junichi Shimizu, MD, PhD, Hiroshige Yoshioka, MD, PhD, Ichiro Yoshino, MD, PhD, Toshihiro Misumi, PhD, Nobuyuki Katakami, MD, PhD, Masahide Oki, MD, PhD, Takashi Kijima, MD, PhD, Kenichi Chikamori, MD, PhD, Kazumi Nishino, MD, PhD, Yuki Kobayashi, MS, Asako Miwa, BA, Misa Tanaka, MS, and Akihiko Gemma, PhD
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Extensive-stage small cell lung cancer ,Atezolizumab ,Immune checkpoint inhibitor ,Observational study ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Introduction: On the basis of the IMpower133 trial, atezolizumab plus carboplatin and etoposide (CE) is approved as first-line treatment for extensive-stage (ES)-SCLC. The J-TAIL-2 study evaluated atezolizumab plus CE in routine clinical practice settings. Methods: J-TAIL-2 was a prospective, multicenter observational study in Japan. Patients with ES-SCLC received atezolizumab plus CE in clinical practice. The primary end point was 12-month OS rate. Secondary end points included overall survival (OS), progression-free survival (PFS), and safety in select subgroups, including the IMpower133-unlike (i.e., Eastern Cooperative Oncology Group performance status 2 or more, interstitial lung disease, autoimmune disease) versus IMpower133-like groups. Results: Overall, 403 patients were included; the median age was 71 years, 16.6% (n = 67) had an Eastern Cooperative Oncology Group performance status 2 or more, 26.8% (n = 108) had brain metastasis, 6.9% (n = 28) had interstitial lung disease, 4.0% (n = 16) had autoimmune disease, and 72.7% (n = 293) were IMpower133-unlike. In the efficacy population (n = 399), the 12-month OS rate was 63.7%, median OS was 16.5 months, and median PFS was 5.1 months. In IMpower133-unlike versus IMpower133-like subgroups, the 12-month OS rate was 58.5% versus 77.5%, median OS was 15.5 versus 19.1 months (hazard ratio, 1.32; 95% confidence interval: 0.98–1.77), and median PFS was 4.8 versus 5.4 months (hazard ratio, 1.14; 95% confidence interval: 0.90–1.45). No new safety signals were observed (safety population, n = 400); safety outcomes in the IMpower133-unlike and IMpower133-like subgroups were similar. Conclusions: In J-TAIL-2, atezolizumab plus CE had efficacy in patients with ES-SCLC in clinical practice that was consistent with that in IMpower133. Taken together with the acceptable safety profile, these data support the use of atezolizumab plus CE in patients with ES-SCLC in Japan, including those who would have been ineligible for IMpower133.
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- 2025
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40. Complicated case of bilateral emphysematous pyelonephritis and emphysematous cystitis successfully treated with transurethral drainage and ureteral stents
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Yoshihiro Kawaguchi, Yoshikado Miyagawa, Shigehisa Mizuta, Kosuke Ueda, Kiyoaki Nishihara, Makoto Nakiri, and Tsukasa Igawa
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Emphysematous pyelonephritis ,Emphysematous cystitis ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Emphysematous pyelonephritis and emphysematous cystitis are intractable diseases. Eight cases of bilateral emphysematous pyelonephritis and emphysematous cystitis have been reported, but no treatment has been established. An 88-year-old female was admitted with traumatic subarachnoid hemorrhage, and on the fourth day of hospitalization, she developed fever and septic shock. A computed tomography scan revealed bilateral emphysematous pyelonephritis and emphysematous cystitis. The patient was treated with bilateral double-J stents and an indwelling urethral catheter. This is the first report of bilateral emphysematous pyelonephritis and emphysematous cystitis treated conservatively with drainage and an internal stent, which may be a treatment option.
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- 2024
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41. Determination of Genotype and Phenotypes in Pediatric Patients With Biventricular Noncompaction
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Keiichi Hirono, Yukiko Hata, Teruhiko Imamura, Kaori Tsuboi, Shinya Takarada, Mako Okabe, Hideyuki Nakaoka, Keijiro Ibuki, Sayaka Ozawa, Shojiro Ichimata, Naoki Nishida, Hidenori Iwasaki, Susumu Urata, Seigo Okada, Tomoya Hiratsuji, Heima Sakaguchi, Kiyohiro Takigiku, Makoto Nakazawa, Eiki Nishihara, Masako Harada, Osamu Matsuo, Kenji Yasuda, Yoko Yoshida, Hidemasa Namiki, Kazushi Yasuda, Toshinobu Ifuku, Kotaro Urayama, Hideharu Oka, Kayo Ogino, Akio Kato, Nobuhiko Kan, Shunji Seki, Mitsuru Seki, Yutaka Odanaka, Satoru Iwashima, Shuichiro Yoshida, Toyohisa Miyata, Tomoyuki Miyamoto, Ken Watanabe, Naoki Kuwabara, Ryo Inuzuka, Yoshihiro Takahashi, Hisanori Sakazaki, Jun Muneuchi, Shigetoyo Kogaki, Fujito Numano, Sachiko Kido, Masaki Nii, Shinsuke Hoshino, Hidekazu Ishida, Jun Maeda, Yasunobu Hayabuchi, Yoshikazu Otsubo, Kazuyuki Ikeda, Shinya Tsukano, Makoto Watanabe, Nobuo Momoi, Takanari Fujii, Tao Fujioka, Mitsuhiro Fujino, Hiroki Uchiyama, Shigehito Baba, Hitoshi Horigome, Takashi Honda, Kazutaka Suzuki, and Fukiko Ichida
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biventricular noncompaction ,congenital heart disease ,dyskinesis ,genetics ,heart failure ,left ventricular noncompaction ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background Left ventricular noncompaction (LVNC) is a hereditary type of cardiomyopathy characterized by prominent trabeculations. Detailed characteristics of biventricular noncompaction (BiVNC) remain unknown. This study aimed to elucidate the clinical characteristics and genetic landscape of BiVNC. Methods and Results We recruited children with left ventricular noncompaction from Japanese multi‐institutional centers from 2013 to 2021. Left ventricular noncompaction was classified as BiVNC, congenital heart disease, arrhythmia, dilated cardiomyopathy, or normal function. In these patients, cardiomyopathy‐associated genes were screened. A total of 234 patients (127 male; mean age, 4 months [range, 0–6.6 years]) were enrolled in this study, of whom 25 had BiVNC; 55, normal function; 84, dilated cardiomyopathy; 38, congenital heart disease; and 32, arrhythmia. BiVNC was diagnosed during the perinatal period in 10 patients, in whom the prevalence was higher than that in other patients. A total of 14 patients in the group with BiVNC had congenital heart disease, but not necessarily right heart lesions. Left ventricular dyskinesis was frequently observed in the lateral wall (24%) and apex (28%). Eleven pathogenic variants were found in 11 patients with BiVNC (44.0%). The group with BiVNC had a higher ratio of mitochondrial and developmental gene variants than the other groups. Among all groups, the group with BiVNC had the worst survival rate (P=0.0009). Conclusions Pediatric patients with BiVNC had a high rate of ventricular dyskinesis and poor outcome. A comprehensive and careful screening for disease‐causing genes and phenotype may help identify specific patients with left ventricular noncompaction and mortality‐related cardiac phenotypes.
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- 2024
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42. Efficacy of exercise with the hybrid assistive limb lumbar type on physical function in mobility-limited older adults: A 5-week randomized controlled trial
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Yoshinobu Saito, Sho Nakamura, Takashi Kasukawa, Makoto Nagasawa, Yuko Oguma, and Hiroto Narimatsu
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Biofeedback ,Exercise ,Frailty ,Hybrid assistive limb ,Walking speed ,Sarcopenia ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background: Sarcopenia and frailty often worsen in older adults because of declines in activities of daily living and social connections that are associated with chronic diseases and traumatic injuries such as falls and fractures. Exercise intervention for sarcopenia can take >3 months to improve muscle mass, muscle strength, and walking speed. Thus, a specialized intervention system for shorter periods of time is needed. In this study, we aimed to evaluate the short-term efficacy of an exercise program using the wearable cyborg Hybrid Assistive Limb (HAL) lumbar type in physical function in mobility-limited older adults who do not require transition to long-term care. Methods: This randomized, single-blind, parallel-group study involved 79 community-dwelling older adults with physical frailty or locomotive syndrome assigned to an intervention group (n = 40) with the HAL lumbar type exercise program or a control group (n = 39) without the exercise program. The intervention group underwent trunk training (including trunk and hip flexion, standing and sitting from a single sitting position, and squats) and gait training (treadmill and parallel bars) twice a week for 5 weeks while wearing the HAL lumbar type. The 10-m usual and maximum walking speeds, Timed Up and Go test results, 5-times chair-standing test results, 5-question Geriatric Locomotive Function Scale (GLFS-5) scores, body-fat percentage, and muscle mass were measured before and after the intervention and analyzed using the intention-to-treat method. Results: The intervention (23 % male; mean age, 74.7 ± 4.7 years) and control (21 % male; mean age, 75.1 ± 4.1 years) groups did not differ significantly in baseline characteristics. Seventy-seven participants completed the program; two withdrew for personal reasons. The mean difference (standard error) between the groups for the primary outcome (usual walking speed) was 0.35 (0.04) m/s; the time-by-group interaction was significant (p
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- 2024
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43. Supplementary motor area is deactivated during mental rotation tasks with biomechanical constraints in fMRI
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Makoto Nomura, Michihiko Koeda, Yumiko Ikeda, Amane Tateno, Ryosuke Arakawa, and Yoichiro Aoyagi
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biomechanical constraints ,functional magnetic resonance imaging ,mental rotation ,motor imagery ,supplementary motor area ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
IntroductionMental rotation (MR) tasks of body parts involve anatomically interconnected brain systems. The systems are implicated in sensorimotor information integration and activate cortical motor-related areas, corresponding to the execution of similar motor tasks. In this study, we aimed to investigate the effect of varying the angle in the hand MR task on cerebral activation of the motor-related areas.MethodsTwenty healthy right-handed participants were recruited. We investigated cerebral activation while each participant decided whether a hand-palm image, rotated by 0°, 90°, 180°, and 270°, was a right or left hand.Results and discussionA significant negative correlation between the angle and brain activity was observed in the right and left supplementary motor area (SMA) and right posterior anterior cingulate gyrus. The SMA was inactivated with 180°- or 270°-rotated images in the regions of interest analysis. 180°- and 270°-rotated palms would be biomechanically difficult to position; thus, SMA deactivation may be closely associated with biomechanical constraints. This study provided novel findings regarding the neurophysiological mechanisms of motor imagery and may be useful in developing treatment plans using MR tasks during patient rehabilitation.
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- 2024
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44. Optimizing link-length fitting between an operator and a robot with compensation for habitual movements
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Takuya Otani, Makoto Nakamura, Koichi Kimura, and Atsuo Takanishi
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Electronics ,TK7800-8360 ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Teleoperation has become increasingly important for the real-world application of robots. However, in current teleoperation applications, operators need to visually recognize any physical deviations between the robot and themselves and correct its operation accordingly. Even when humans move their bodies, achieving high positional accuracy can be difficult for them, which can limit their speed of movement and place a heavy burden on them. In this study, we proposed a parameter optimization method for feedforward compensation of the link-length deviation and operator's habitual body movements in leader–follower control in 3D space. To optimize the parameters, we used Digital Annealer developed by Fujitsu Ltd, which could rapidly solve the combinatorial optimization problem. The objective function minimized the difference between the hand positions of the robot and targets. Simulations verified that the proposed method could reduce hand positional differences.
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- 2024
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45. Smartphone-Based Digital Peer Support for a Walking Intervention Among Public Officers in Kanagawa Prefecture: Single-Arm Pre- and Postintervention Evaluation
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Masumi Okamoto, Yoshinobu Saito, Sho Nakamura, Makoto Nagasawa, Megumi Shibuya, Go Nagasaka, and Hiroto Narimatsu
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Medicine - Abstract
BackgroundDigital peer support, defined as peer support delivered through technology such as smartphone apps, may be promising to promote activity in the form of step counts. Interactions among users have a positive impact on retention rates, and apps with social elements show significant improvements in daily step count. However, the feasibility of digital peer support in promoting physical activity (PA) is unknown; therefore, its effectiveness on step count and the clinical implications remain unconfirmed. ObjectiveThis study aimed to assess the feasibility of digital peer support over a 3-month intervention period using the retention rate as the outcome. Moreover, changes in daily step count and physical measurements were compared between pre- and postintervention. MethodsThe study design was a 3-month 1-arm intervention with participants from local government offices in Kanagawa, Japan. We used an available smartphone app, Minchalle, as the tool for the group intervention. Participants were required to report their daily step count to a maximum of 5 members composed exclusively of study participants. The primary outcome was the retention rate. Secondary outcomes included daily step count, the rate of achieving daily step goals, physical measurements, and lifestyle characteristics. Descriptive statistics and the Pearson coefficient were used to examine the relationship between goal achievement and step count, as well as changes in step count and various variables including physical measurements. ResultsOf the 63 participants, 62 completed the intervention. The retention rate was 98% (62/63). The average daily step count during the intervention was 6993 (SD 2328) steps, an 1182-step increase compared with the count observed 1 week before the intervention began. The rate of achieving the daily step count during the intervention was 53.5% (SD 26.2%). There was a significant correlation (r=0.27, P=.05) between achieving daily step goals and increasing daily step count. Comparative analyses showed that changes in weight (68.56, SD 16.97 kg vs 67.30, SD 16.86 kg; P
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- 2024
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46. Prostate brachytherapy seed migration to the right renal artery due to right‐to‐left shunting across a patent foramen ovale
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Makoto Nakiri, Kosuke Ueda, Ryuji Hoshino, Naoki Ito, Hirofumi Kurose, Shoichiro Nohara, Koichiro Muraki, Chikayuki Hattori, Etsuyo Ogo, and Tsukasa Igawa
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brachytherapy ,foreign‐body migration ,kidney ,patent foramen ovale ,prostate cancer ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Introduction The seeds used in brachytherapy for prostate cancer may migrate through the surrounding venous plexus to other sites in the body, most commonly to the pulmonary vasculature. Case presentation A 78‐year‐old Japanese man received iodine‐125 low‐dose‐rate prostate brachytherapy. Computed tomography revealed that one seed had migrated to the right kidney. No seed was observed in the ureter upon ureteroscopy. Transesophageal echocardiography confirmed a right‐to‐left shunt due to a patent foramen ovale, suggesting that the seed had migrated into the right renal artery. Three years after treatment, no recurrence of prostate cancer and no adverse events due to seed migration or due to the patent foramen ovale occurred. Conclusion Arteriovenous malformations and a right‐to‐left shunt should be suspected if a brachytherapy seed has migrated to an artery of the systemic circulatory system.
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- 2024
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47. Lethal disseminated intravascular coagulation induced by primary and metastatic neuroendocrine prostate cancer
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Takashi Ando, Taro Sasaki, and Makoto Naito
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biopsy ,case reports ,disseminated intravascular coagulation ,neoplasm metastasis ,neuroendocrine carcinoma ,neuroendocrine carcinoma prostate cancer ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Introduction Neuroendocrine prostate cancer has a poor prognosis. Although disseminated intravascular coagulation associated with malignancy can be lethal, it very rarely occurs among patients with primary neuroendocrine prostate cancer. Case presentation An 80‐year‐old man presented to our hospital with bloody sputum. Blood examination indicated disseminated intravascular coagulation. Serum levels of prostate‐specific antigen and neuron‐specific enolase were 44.274 and 176 ng/mL, respectively. Core needle biopsies of an irregular mass in the prostate and a metastatic tumor in the left iliac bone showed similar neuroendocrine carcinoma cells. Hence, the patient was diagnosed with disseminated intravascular coagulation associated with primary and metastatic neuroendocrine prostate cancer. Unfortunately, he passed away 3 weeks after the biopsies. Conclusion Given the difficulty of effectively treating metastatic neuroendocrine prostate cancer among patients in poor physical condition due to disease progression, identifying a new well‐tolerated treatment modality is imperative.
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- 2024
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48. Males conditionally inseminate at three female body locations according to female mating history and female maturity status in a squid
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Kamrun Naher Azad, Md. Nur E. Alam, Makoto Nagata, Satoshi Tomano, Hiroki Ono, Kyoko Sugai, and Noritaka Hirohashi
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Cephalopod reproduction ,Alternative reproductive tactics ,Postcopulatory sexual selection ,Condition-dependence ,Sperm competition ,Sperm allocation ,Medicine ,Science - Abstract
Abstract In some squids, such as those in the family Loliginidae, upon copulation, females receive and store male-delivered sperm capsules, spermatangia, at two different body locations: the buccal membrane and the distal end of the oviduct. This insemination site dimorphism is associated with alternative reproductive strategies. However, in Loliolus sumatrensis, a species of Loliginidae, the females possess three insemination sites: buccal membrane (BM), basal left IV arm (ARM) and lateral head behind the left eye (EYE), therefore we studied such the unusual phenomena. We developed microsatellite markers and genotyped the paternity of each spermatangium on three sites. We found multiple paternity at every single site and simultaneous usage of all three sites by a few males. The seasonal dynamics of a population in the Seto Inland Sea revealed a set priority for the initial use of insemination sites as BM, followed by ARM and then EYE, whereas the maximum number of stored spermatangia was greater in EYE > ARM > BM. Female maturity status was correlated with the usage pattern of insemination sites but not with the number of stored spermatangia at any insemination site. These results suggest that a male squid inseminates at different locations according to female mating history and female maturity status.
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- 2024
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49. Distinction of ALK fusion gene‐ and EGFR mutation‐positive lung cancer with tumor markers
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Takahiro Akita, Ryo Ariyasu, Sho Kakuto, Keiki Miyadera, Ayu Kiritani, Ryosuke Tsugitomi, Yoshiaki Amino, Ken Uchibori, Satoru Kitazono, Noriko Yanagitani, Sadatomo Tasaka, and Makoto Nishio
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ALK‐positive lung cancer ,CEA ,CYFRA21‐1 ,EGFR‐positive lung cancer ,tumor marker ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background It is difficult to predict gene mutations individually based on clinical background alone. Tumor markers may help to predict each gene mutation. Identifying tumor markers that can predict gene mutation will facilitate timely genetic testing and intervention. Methods We selected 134 cases of advanced or recurrent ALK‐positive and 172 cases of advanced or recurrent EGFR‐positive lung cancer from our clinical database. The cutoff values for the tumor markers were defined as 5.0 ng/mL or higher for carcinoembryonic antigen (CEA) and 3.5 ng/mL or higher for soluble fragment of cytokeratin 19 (CYFRA21‐1) in accordance with the institutional standards. A positive CYFRA21‐1:CEA ratio was defined as 0.7 or higher. Results The CEA‐positivity rate was 49% for ALK‐positive lung cancers and 73% for EGFR‐positive lung cancers, which was significantly different (p
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- 2024
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50. Glutamate production from aerial nitrogen using the nitrogen-fixing bacterium Klebsiella oxytoca
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Daisuke Yoshidome, Makoto Hidaka, Toka Miyanaga, Yusuke Ito, Saori Kosono, and Makoto Nishiyama
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Biology (General) ,QH301-705.5 - Abstract
Abstract Glutamate is an essential biological compound produced for various therapeutic and nutritional applications. The current glutamate production process requires a large amount of ammonium, which is generated through the energy-consuming and CO2-emitting Haber–Bosch process; therefore, the development of bio-economical glutamate production processes is required. We herein developed a strategy for glutamate production from aerial nitrogen using the nitrogen-fixing bacterium Klebsiella oxytoca. We showed that a simultaneous supply of glucose and citrate as carbon sources enhanced the nitrogenase activity of K. oxytoca. In the presence of glucose and citrate, K. oxytoca strain that was genetically engineered to increase the supply of 2-oxoglutarate, a precursor of glutamate synthesis, produced glutamate extracellularly more than 1 g L−1 from aerial nitrogen. This strategy offers a sustainable and eco-friendly manufacturing process to produce various nitrogen-containing compounds using aerial nitrogen.
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- 2024
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